Pregenerated sensors for LINC01673 (Homo sapiens)
Ensembl gene IDs: ENSG00000234052Ensembl transcript IDs: ENST00000426418.2, ENST00000657236.1, ENST00000660773.1, ENST00000662686.1, ENST00000668267.1
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGCTTCATCCAGGTGTACCATCATCACCAACACCTTGTCTCAGCTTaGTTCCTGCCTCAGGGCTTTTTGGATGCTTTCGTTCCCATACTT | + |
|
Preference number: 5 (lower is better) Translates to: SFIQVYHHHQHLVSA*FLPQGFLDAFVPIL Trigger: AAGTATGGGAACGAAAGCATCCAAAAAGCCCTGAGGCAGGAAGCAAGCTGAGACAAGGTGTTGGTGATGATGGTACACCTGGATGAAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000426418.2 ENST00000660773.1 |
||
| CDS CCA 90 bp | ATCACCAACACCTTGTCTCAGCTTGCTTCCTGCCTCAGGGCTTTTTaGATGCTTTCGTTCCCATACTTCTGCAAACTTGAAAGTGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ITNTLSQLASCLRAF*MLSFPYFCKLESAS Trigger: ACTTGCACTTTCAAGTTTGCAGAAGTATGGGAACGAAAGCATCCAAAAAGCCCTGAGGCAGGAAGCAAGCTGAGACAAGGTGTTGGTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000426418.2 ENST00000660773.1 |
||
| CDS GCA 90 bp | GCTTCCTGCCTCAGGGCTTTTTGGATGCTTTCGTTCCCATACTTCTaGAAACTTGAAAGTGCAAGTGTCTTAATATCCCGTAGGACAACT | + |
|
Preference number: 5 (lower is better) Translates to: ASCLRAFWMLSFPYF*KLESASVLISRRTT Trigger: AGTTGTCCTACGGGATATTAAGACACTTGCACTTTCAAGTTTGCAGAAGTATGGGAACGAAAGCATCCAAAAAGCCCTGAGGCAGGAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000426418.2 ENST00000660773.1 |
||
| CDS CCA 90 bp | GTTTCTCGACACACTGTAATGATTTATCTTGACCGATCCACTTGTTaGTACACTCTGGTGGGAGATCACCTAATTATGCGTGCTTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VSRHTVMIYLDRSTC*YTLVGDHLIMRASE Trigger: TTCAGAAGCACGCATAATTAGGTGATCTCCCACCAGAGTGTACCAACAAGTGGATCGGTCAAGATAAATCATTACAGTGTGTCGAGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662686.1 ENST00000668267.1 |
||
| CDS TCA 90 bp | AATAGGTGTTCTAATAGTTTCTCGACACACTGTAATGATTTATCTTaGCCGATCCACTTGTTGGTACACTCTGGTGGGAGATCACCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: NRCSNSFSTHCNDLS*PIHLLVHSGGRSPN Trigger: ATTAGGTGATCTCCCACCAGAGTGTACCAACAAGTGGATCGGTCAAGATAAATCATTACAGTGTGTCGAGAAACTATTAGAACACCTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662686.1 ENST00000668267.1 |
||
| CDS GCA 90 bp | TATACAATCCATAAGCAAATTCTCAGGCTCAGGTTTCAAGAAAAGTaGAACTCTCCAAATCACTTTCCATGTTCATCACAACTCAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: YTIHKQILRLRFQEK*NSPNHFPCSSQLRY Trigger: ATACCTGAGTTGTGATGAACATGGAAAGTGATTTGGAGAGTTGCACTTTTCTTGAAACCTGAGCCTGAGAATTTGCTTATGGATTGTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660773.1 |
||
| CDS TCA 90 bp | TTATCTCTCTATATAGCCGTTTCTTCATCTATGTCATCATGTCCATaGGAAGATGGACTCAGTGTATCTGAAAATGATGCTTTGATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSLYIAVSSSMSSCP*EDGLSVSENDALIV Trigger: CACTATCAAAGCATCATTTTCAGATACACTGAGTCCATCTTCTCATGGACATGATGACATAGATGAAGAAACGGCTATATAGAGAGATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668267.1 |
||
| CDS CAA 90 bp | CTGCTGAAGTTAGCTTCATCCAGGTGTACCATCATCACCAACACCTaGTCTCAGCTTGCTTCCTGCCTCAGGGCTTTTTGGATGCTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: LLKLASSRCTIITNT*SQLASCLRAFWMLS Trigger: CGAAAGCATCCAAAAAGCCCTGAGGCAGGAAGCAAGCTGAGACAAGGTGTTGGTGATGATGGTACACCTGGATGAAGCTAACTTCAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000426418.2 ENST00000660773.1 |
||
| CDS GCA 72 bp | CAGGTGTACCATCATCACCAACACCTTGTCTCAGCTTaGTTCCTGCCTCAGGGCTTTTTGGATGCTTTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: QVYHHHQHLVSA*FLPQGFLDAFV Trigger: AACGAAAGCATCCAAAAAGCCCTGAGGCAGGAAGCAAGCTGAGACAAGGTGTTGGTGATGATGGTACACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000426418.2 ENST00000660773.1 |
||
| CDS CAA 72 bp | TTAGCTTCATCCAGGTGTACCATCATCACCAACACCTaGTCTCAGCTTGCTTCCTGCCTCAGGGCTTTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LASSRCTIITNT*SQLASCLRAFW Trigger: CCAAAAAGCCCTGAGGCAGGAAGCAAGCTGAGACAAGGTGTTGGTGATGATGGTACACCTGGATGAAGCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000426418.2 ENST00000660773.1 |
||
| CDS GCA 72 bp | GTCACCAGATACCATGAATCAGAAACAAGCCATTCCTaGTGGCACACTGAATTCTTGACCTACAGAATTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VTRYHESETSHS*WHTEFLTYRIA Trigger: TGCAATTCTGTAGGTCAAGAATTCAGTGTGCCAGCAGGAATGGCTTGTTTCTGATTCATGGTATCTGGTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660773.1 |
||
| CDS GCA 72 bp | CTCAGGGCTTTTTGGATGCTTTCGTTCCCATACTTCTaGAAACTTGAAAGTGCAAGTGTCTTAATATCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LRAFWMLSFPYF*KLESASVLISR Trigger: ACGGGATATTAAGACACTTGCACTTTCAAGTTTGCAGAAGTATGGGAACGAAAGCATCCAAAAAGCCCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000426418.2 ENST00000660773.1 |
||
| CDS CCA 72 bp | CTTCTCTCACTCTTCCCAGTCCTCTATTCCATTTCCTaGCATCATATACAATCCATAAGCAAATTCTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLSLFPVLYSIS*HHIQSISKFSG Trigger: GCCTGAGAATTTGCTTATGGATTGTATATGATGCCAGGAAATGGAATAGAGGACTGGGAAGAGTGAGAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426418.2 ENST00000660773.1 |
||
| CDS CCA 72 bp | CACACTGTAATGATTTATCTTGACCGATCCACTTGTTaGTACACTCTGGTGGGAGATCACCTAATTATGCGT | + |
|
Preference number: 6 (lower is better) Translates to: HTVMIYLDRSTC*YTLVGDHLIMR Trigger: ACGCATAATTAGGTGATCTCCCACCAGAGTGTACCAACAAGTGGATCGGTCAAGATAAATCATTACAGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662686.1 ENST00000668267.1 |
||
| CDS TCA 72 bp | CAGAAACAAGCCATTCCTGCTGGCACACTGAATTCTTaGCCTACAGAATTGCAAATGTTGTTGCTGTTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: QKQAIPAGTLNS*PTELQMLLLFL Trigger: TAAGAACAGCAACAACATTTGCAATTCTGTAGGTCAAGAATTCAGTGTGCCAGCAGGAATGGCTTGTTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660773.1 |
||
| CDS TCA 72 bp | TCTAATAGTTTCTCGACACACTGTAATGATTTATCTTaGCCGATCCACTTGTTGGTACACTCTGGTGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SNSFSTHCNDLS*PIHLLVHSGGR Trigger: TCTCCCACCAGAGTGTACCAACAAGTGGATCGGTCAAGATAAATCATTACAGTGTGTCGAGAAACTATTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662686.1 ENST00000668267.1 |
||
| CDS CCA 72 bp | ACCAGATACCATGAATCAGAAACAAGCCATTCCTGCTaGCACACTGAATTCTTGACCTACAGAATTGCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: TRYHESETSHSC*HTEFLTYRIAN Trigger: ATTTGCAATTCTGTAGGTCAAGAATTCAGTGTGCCAGCAGGAATGGCTTGTTTCTGATTCATGGTATCTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660773.1 |
||
| CDS CAA 72 bp | TCAGAAACAAGCCATTCCTGCTGGCACACTGAATTCTaGACCTACAGAATTGCAAATGTTGTTGCTGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SETSHSCWHTEF*TYRIANVVAVL Trigger: AAGAACAGCAACAACATTTGCAATTCTGTAGGTCAAGAATTCAGTGTGCCAGCAGGAATGGCTTGTTTCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660773.1 |
||
| CDS CAA 90 bp | ATCCTTGAGCAAGCTTCTTTATCTCTCTATATAGCCGTTTCTTCATaGTGTCTAGCTGTTGGCAACGGCATTATGGAAACTTCTGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ILEQASLSLYIAVSS*CLAVGNGIMETSES Trigger: AGACTCAGAAGTTTCCATAATGCCGTTGCCAACAGCTAGACACAATGAAGAAACGGCTATATAGAGAGATAAAGAAGCTTGCTCAAGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657236.1 ENST00000662686.1 |
||
| CDS CAA 72 bp | CAAGCTTCTTTATCTCTCTATATAGCCGTTTCTTCATaGTGTCTAGCTGTTGGCAACGGCATTATGGAAACT | + |
|
Preference number: 6 (lower is better) Translates to: QASLSLYIAVSS*CLAVGNGIMET Trigger: AGTTTCCATAATGCCGTTGCCAACAGCTAGACACAATGAAGAAACGGCTATATAGAGAGATAAAGAAGCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657236.1 ENST00000662686.1 |
||
| CDS CAA 90 bp | TATCCAGATGATTCTAGGTTGCAGTTACTCCTAGCAATTGAAATCTaGCCTGTTAAGTCACCAGATACCATGAATCAGAAACAAGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: YPDDSRLQLLLAIEI*PVKSPDTMNQKQAI Trigger: AATGGCTTGTTTCTGATTCATGGTATCTGGTGACTTAACAGGCAAGATTTCAATTGCTAGGAGTAACTGCAACCTAGAATCATCTGGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660773.1 |
||
| CDS CAA 72 bp | CTCTTCCTGGTTTTAACTTTGTCAGAATTCCATATATaGGTGTTCAGATGTTCTAGTTGGAAACGTATAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LFLVLTLSEFHI*VFRCSSWKRIA Trigger: GGCTATACGTTTCCAACTAGAACATCTGAACACCAATATATGGAATTCTGACAAAGTTAAAACCAGGAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000426418.2 ENST00000657236.1 ENST00000660773.1 ENST00000662686.1 ENST00000668267.1 |
||
| CDS CAA 90 bp | TCAGGTCATCTTTTAGAGATAAAGAGTTCCAGTCCTCATTATCTATaGGTGATATTGGTGGTATTGGTGAGAATTGATCATATACTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SGHLLEIKSSSPHYL*VILVVLVRIDHILC Trigger: ACACAGTATATGATCAATTCTCACCAATACCACCAATATCACCAATAGATAATGAGGACTGGAACTCTTTATCTCTAAAAGATGACCTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668267.1 |
||
| CDS CAA 72 bp | GACATGTATATGAAAAAGTATCCAGATGATTCTAGGTaGCAGTTACTCCTAGCAATTGAAATCTTGCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: DMYMKKYPDDSR*QLLLAIEILPV Trigger: AACAGGCAAGATTTCAATTGCTAGGAGTAACTGCAACCTAGAATCATCTGGATACTTTTTCATATACATGTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660773.1 |
||
| CDS CAA 72 bp | CTTTTAGAGATAAAGAGTTCCAGTCCTCATTATCTATaGGTGATATTGGTGGTATTGGTGAGAATTGATCAT | + |
|
Preference number: 6 (lower is better) Translates to: LLEIKSSSPHYL*VILVVLVRIDH Trigger: ATGATCAATTCTCACCAATACCACCAATATCACCAATAGATAATGAGGACTGGAACTCTTTATCTCTAAAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668267.1 |
||