Pregenerated sensors for LINC01664 (Homo sapiens)
Ensembl gene IDs: ENSG00000235478Ensembl transcript IDs: ENST00000428078.4, ENST00000441544.2, ENST00000654656.1, ENST00000662102.1, ENST00000668330.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGAAGGGCGCTGGACGGAGGGTGGAGGCGAAGCTGCCCACTGCCTaGCTCAGAGCTGAGAAGGCCAGGTGCAAAGCCCGCCCTGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GKGAGRRVEAKLPTA*LRAEKARCKARPVA Trigger: AGCTACAGGGCGGGCTTTGCACCTGGCCTTCTCAGCTCTGAGGCAGGCAGTGGGCAGCTTCGCCTCCACCCTCCGTCCAGCGCCCTTCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000428078.4 ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 ENST00000668330.1 |
||
| CDS TCA 90 bp | CATTTCCTTGGTGTTCCCCTTGGCGGCAGCCGCCTGCTCTCAGCCTaGGGCAGGTGCAGGGAGCCTGCTGGTAATCGGGACACCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HFLGVPLGGSRLLSA*GRCREPAGNRDTLQ Trigger: CTGCAGGGTGTCCCGATTACCAGCAGGCTCCCTGCACCTGCCTCAGGCTGAGAGCAGGCGGCTGCCGCCAAGGGGAACACCAAGGAAATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 |
||
| CDS GCA 90 bp | CAGCCTGAGGCAGGTGCAGGGAGCCTGCTGGTAATCGGGACACCCTaGAGAGCTGGGGTTGCTGTAGCAACCAGATGCTGCCTGGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QPEAGAGSLLVIGTP*RAGVAVATRCCLEG Trigger: GCCCTCCAGGCAGCATCTGGTTGCTACAGCAACCCCAGCTCTGCAGGGTGTCCCGATTACCAGCAGGCTCCCTGCACCTGCCTCAGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441544.2 ENST00000654656.1 |
||
| CDS CCA 90 bp | GGCCTGACTCCTCCACTGGTTTTTAGTGCCTTAGGGAGAGGCGGATaGCCCCATGGGAAGGGCGCTGGACGGAGGGTGGAGGCGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLTPPLVFSALGRGG*PHGKGAGRRVEAKL Trigger: CAGCTTCGCCTCCACCCTCCGTCCAGCGCCCTTCCCATGGGGCCATCCGCCTCTCCCTAAGGCACTAAAAACCAGTGGAGGAGTCAGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000428078.4 ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 ENST00000668330.1 |
||
| CDS CCA 90 bp | GGCAGGTGCAGGGAGCCTGCTGGTAATCGGGACACCCTGCAGAGCTaGGGTTGCTGTAGCAACCAGATGCTGCCTGGAGGGCGGAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: GRCREPAGNRDTLQS*GCCSNQMLPGGRNF Trigger: AAAATTCCGCCCTCCAGGCAGCATCTGGTTGCTACAGCAACCCCAGCTCTGCAGGGTGTCCCGATTACCAGCAGGCTCCCTGCACCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000441544.2 ENST00000654656.1 |
||
| CDS TCA 90 bp | CCCCAGCCTTGGATGAGTCCTGGGGTGAGCTGGTGTGCTCTCTCCTaGGACTGTCTACGCAGGGCCACTGACTGCATTCCTTCCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PQPWMSPGVSWCALS*DCLRRATDCIPSLV Trigger: CACCAAGGAAGGAATGCAGTCAGTGGCCCTGCGTAGACAGTCTCAGGAGAGAGCACACCAGCTCACCCCAGGACTCATCCAAGGCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000654656.1 ENST00000662102.1 ENST00000668330.1 |
||
| CDS CCA 90 bp | CCAGAGTTGCTGCATCGACATCCATCCCCAGCCTTGGATGAGTCCTaGGGTGAGCTGGTGTGCTCTCTCCTGAGACTGTCTACGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PELLHRHPSPALDES*GELVCSLLRLSTQG Trigger: GCCCTGCGTAGACAGTCTCAGGAGAGAGCACACCAGCTCACCCCAGGACTCATCCAAGGCTGGGGATGGATGTCGATGCAGCAACTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654656.1 ENST00000662102.1 ENST00000668330.1 |
||
| CDS GCA 90 bp | CAGCCTGAGGCAGGTGCAGGGAGCCTGCTGGTAATCGGGACACCCTaGAGAGCTGGGGTTGCTGTAGCAACCAGATGCTGCTCATTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QPEAGAGSLLVIGTP*RAGVAVATRCCSFH Trigger: ATGAAATGAGCAGCATCTGGTTGCTACAGCAACCCCAGCTCTGCAGGGTGTCCCGATTACCAGCAGGCTCCCTGCACCTGCCTCAGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662102.1 |
||
| CDS CCA 90 bp | TTGGGTCTGAGCCATTACCTTGGAATCAGAACATGGGCATTTCCTTaGTGTTCCCCTTGGCGGCAGCCGCCTGCTCTCAGCCTGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGLSHYLGIRTWAFP*CSPWRQPPALSLRQ Trigger: CTGCCTCAGGCTGAGAGCAGGCGGCTGCCGCCAAGGGGAACACCAAGGAAATGCCCATGTTCTGATTCCAAGGTAATGGCTCAGACCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 |
||
| CDS TCA 90 bp | GGTGTTTTCAGGGAACTTCTCCATCCGCTGGAATCGGGTCGTCCCTaGGATGGCTCGCGACCCCAGGGCTGGGTACATGGATATTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GVFRELLHPLESGRP*DGSRPQGWVHGYLG Trigger: TCCTAAATATCCATGTACCCAGCCCTGGGGTCGCGAGCCATCTCAGGGACGACCCGATTCCAGCGGATGGAGAAGTTCCCTGAAAACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000428078.4 ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 ENST00000668330.1 |
||
| CDS TCA 90 bp | GCTGAAACGGACTCTTATTTAAGAGGCAGATTTAGGGGCGAGGCCTaGCTAACCCCTGCGGCTCCACTGCATACAGCTCCCTCACACTGC | + |
|
Preference number: 5 (lower is better) Translates to: AETDSYLRGRFRGEA*LTPAAPLHTAPSHC Trigger: GCAGTGTGAGGGAGCTGTATGCAGTGGAGCCGCAGGGGTTAGTCAGGCCTCGCCCCTAAATCTGCCTCTTAAATAAGAGTCCGTTTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428078.4 |
||
| CDS CCA 90 bp | TTTCAGGGAACTTCTCCATCCGCTGGAATCGGGTCGTCCCTGAGATaGCTCGCGACCCCAGGGCTGGGTACATGGATATTTAGGACTATA | + |
|
Preference number: 5 (lower is better) Translates to: FQGTSPSAGIGSSLR*LATPGLGTWIFRTI Trigger: TATAGTCCTAAATATCCATGTACCCAGCCCTGGGGTCGCGAGCCATCTCAGGGACGACCCGATTCCAGCGGATGGAGAAGTTCCCTGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000428078.4 ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 ENST00000668330.1 |
||
| CDS CCA 90 bp | TCTCCTGAGACTGTCTACGCAGGGCCACTGACTGCATTCCTTCCTTaGTGTCTCTGTCTACTGTGGTGGGCTGTAACCCTCACCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: SPETVYAGPLTAFLP*CLCLLWWAVTLTII Trigger: GATGATGGTGAGGGTTACAGCCCACCACAGTAGACAGAGACACCAAGGAAGGAATGCAGTCAGTGGCCCTGCGTAGACAGTCTCAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654656.1 ENST00000662102.1 ENST00000668330.1 |
||
| CDS GCA 90 bp | TTTCAGTTCCATGGTAAAGCACTGTCTTCTGCCTTCCAGAGTTGCTaGATCGACATCCATCCCCAGCCTTGGATGAGTCCTGGGGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FQFHGKALSSAFQSC*IDIHPQPWMSPGVS Trigger: GCTCACCCCAGGACTCATCCAAGGCTGGGGATGGATGTCGATGCAGCAACTCTGGAAGGCAGAAGACAGTGCTTTACCATGGAACTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000654656.1 ENST00000662102.1 ENST00000668330.1 |
||
| CDS GCA 90 bp | TGGTTTCAGTTCCATGGTAAAGCACTGTCTTCTGCCTTCCAGAGTTaGTGCATCGACATCCATCCCCAGCCTTGGATGAGTCCTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WFQFHGKALSSAFQS*CIDIHPQPWMSPGV Trigger: CACCCCAGGACTCATCCAAGGCTGGGGATGGATGTCGATGCAGCAACTCTGGAAGGCAGAAGACAGTGCTTTACCATGGAACTGAAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000654656.1 ENST00000662102.1 ENST00000668330.1 |
||
| CDS TCA 90 bp | TTTCAGTTCCATGGTAAAGCACTGTCAGGGATTGGCTGTGCAGACTaGCCTCCACGGAACTGGAAAAGGCAGGTTTGGCTGAAACGGACT | + |
|
Preference number: 5 (lower is better) Translates to: FQFHGKALSGIGCAD*PPRNWKRQVWLKRT Trigger: AGTCCGTTTCAGCCAAACCTGCCTTTTCCAGTTCCGTGGAGGTCAGTCTGCACAGCCAATCCCTGACAGTGCTTTACCATGGAACTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428078.4 |
||
| CDS TCA 90 bp | CTAGACACATCTTCCTATTACGTCCCATTCTGCTTTAAAAACCTTTaGGAAGCCCGCTGGGCGGATGCCACTTGCCCAATCTCGTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LDTSSYYVPFCFKNL*EARWADATCPISFP Trigger: AGGGAACGAGATTGGGCAAGTGGCATCCGCCCAGCGGGCTTCTCAAAGGTTTTTAAAGCAGAATGGGACGTAATAGGAAGATGTGTCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000654656.1 ENST00000662102.1 ENST00000668330.1 |
||
| CDS GCA 90 bp | TCCCTTTGGAGCCTTTGTTTTCATCCAGGTGCCCACACCTCTAAATaGCCCTTTATTTTACTCTCTGCTAGACACATCTTCCTATTACGT | + |
|
Preference number: 5 (lower is better) Translates to: SLWSLCFHPGAHTSK*PFILLSARHIFLLR Trigger: ACGTAATAGGAAGATGTGTCTAGCAGAGAGTAAAATAAAGGGGCATTTAGAGGTGTGGGCACCTGGATGAAAACAAAGGCTCCAAAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000654656.1 ENST00000662102.1 ENST00000668330.1 |
||
| CDS TCA 90 bp | AACTTCATCAGGTTGCACATTGAACAGATAAAATCCCCTTGGGTCTaGGCCATTACCTTGGAATCAGAACATGGGCATTTCCTTGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: NFIRLHIEQIKSPWV*AITLESEHGHFLGV Trigger: AACACCAAGGAAATGCCCATGTTCTGATTCCAAGGTAATGGCTCAGACCCAAGGGGATTTTATCTGTTCAATGTGCAACCTGATGAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 |
||
| CDS CCA 72 bp | CTTAGGGAGAGGCGGATGGCCCCATGGGAAGGGCGCTaGACGGAGGGTGGAGGCGAAGCTGCCCACTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LRERRMAPWEGR*TEGGGEAAHCL Trigger: CAGGCAGTGGGCAGCTTCGCCTCCACCCTCCGTCCAGCGCCCTTCCCATGGGGCCATCCGCCTCTCCCTAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000428078.4 ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 ENST00000668330.1 |
||
| CDS GCA 72 bp | GCTGGACGGAGGGTGGAGGCGAAGCTGCCCACTGCCTaGCTCAGAGCTGAGAAGGCCAGGTGCAAAGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: AGRRVEAKLPTA*LRAEKARCKAR Trigger: GCGGGCTTTGCACCTGGCCTTCTCAGCTCTGAGGCAGGCAGTGGGCAGCTTCGCCTCCACCCTCCGTCCAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000428078.4 ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 ENST00000668330.1 |
||
| CDS TCA 72 bp | GCTGAGAAGGCCAGGTGCAAAGCCCGCCCTGTAGCTTaGGCCCATCGCTTGGGGGCACCGAAGCCATCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: AEKARCKARPVA*AHRLGAPKPSR Trigger: CCTAGATGGCTTCGGTGCCCCCAAGCGATGGGCTCAAGCTACAGGGCGGGCTTTGCACCTGGCCTTCTCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000428078.4 ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 ENST00000668330.1 |
||
| CDS CCA 72 bp | CCTCCACTGGTTTTTAGTGCCTTAGGGAGAGGCGGATaGCCCCATGGGAAGGGCGCTGGACGGAGGGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PPLVFSALGRGG*PHGKGAGRRVE Trigger: CTCCACCCTCCGTCCAGCGCCCTTCCCATGGGGCCATCCGCCTCTCCCTAAGGCACTAAAAACCAGTGGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000428078.4 ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 ENST00000668330.1 |
||
| CDS TCA 72 bp | AGGGAACTTCTCCATCCGCTGGAATCGGGTCGTCCCTaGGATGGCTCGCGACCCCAGGGCTGGGTACATGGA | + |
|
Preference number: 6 (lower is better) Translates to: RELLHPLESGRP*DGSRPQGWVHG Trigger: TCCATGTACCCAGCCCTGGGGTCGCGAGCCATCTCAGGGACGACCCGATTCCAGCGGATGGAGAAGTTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000428078.4 ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 ENST00000668330.1 |
||
| CDS GCA 72 bp | GCAGGTGCAGGGAGCCTGCTGGTAATCGGGACACCCTaGAGAGCTGGGGTTGCTGTAGCAACCAGATGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AGAGSLLVIGTP*RAGVAVATRCC Trigger: GCAGCATCTGGTTGCTACAGCAACCCCAGCTCTGCAGGGTGTCCCGATTACCAGCAGGCTCCCTGCACCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 |
||
| CDS CCA 72 bp | CCCAGGCAGGTGTTTTCAGGGAACTTCTCCATCCGCTaGAATCGGGTCGTCCCTGAGATGGCTCGCGACCCC | + |
|
Preference number: 6 (lower is better) Translates to: PRQVFSGNFSIR*NRVVPEMARDP Trigger: GGGGTCGCGAGCCATCTCAGGGACGACCCGATTCCAGCGGATGGAGAAGTTCCCTGAAAACACCTGCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000428078.4 ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 ENST00000668330.1 |
||
| CDS CCA 72 bp | GGAATCAGAACATGGGCATTTCCTTGGTGTTCCCCTTaGCGGCAGCCGCCTGCTCTCAGCCTGAGGCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GIRTWAFPWCSP*RQPPALSLRQV Trigger: CACCTGCCTCAGGCTGAGAGCAGGCGGCTGCCGCCAAGGGGAACACCAAGGAAATGCCCATGTTCTGATTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 |
||
| CDS CAA 72 bp | TGGAATCAGAACATGGGCATTTCCTTGGTGTTCCCCTaGGCGGCAGCCGCCTGCTCTCAGCCTGAGGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: WNQNMGISLVFP*AAAACSQPEAG Trigger: ACCTGCCTCAGGCTGAGAGCAGGCGGCTGCCGCCAAGGGGAACACCAAGGAAATGCCCATGTTCTGATTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 |
||
| CDS CAA 90 bp | CTTGGGTCTGAGCCATTACCTTGGAATCAGAACATGGGCATTTCCTaGGTGTTCCCCTTGGCGGCAGCCGCCTGCTCTCAGCCTGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LGSEPLPWNQNMGIS*VFPLAAAACSQPEA Trigger: TGCCTCAGGCTGAGAGCAGGCGGCTGCCGCCAAGGGGAACACCAAGGAAATGCCCATGTTCTGATTCCAAGGTAATGGCTCAGACCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 |
||
| CDS TCA 72 bp | TGGATGAGTCCTGGGGTGAGCTGGTGTGCTCTCTCCTaGGACTGTCTACGCAGGGCCACTGACTGCATTCCT | + |
|
Preference number: 6 (lower is better) Translates to: WMSPGVSWCALS*DCLRRATDCIP Trigger: AGGAATGCAGTCAGTGGCCCTGCGTAGACAGTCTCAGGAGAGAGCACACCAGCTCACCCCAGGACTCATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654656.1 ENST00000662102.1 ENST00000668330.1 |
||
| CDS CCA 72 bp | CTGCATCGACATCCATCCCCAGCCTTGGATGAGTCCTaGGGTGAGCTGGTGTGCTCTCTCCTGAGACTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LHRHPSPALDES*GELVCSLLRLS Trigger: AGACAGTCTCAGGAGAGAGCACACCAGCTCACCCCAGGACTCATCCAAGGCTGGGGATGGATGTCGATGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654656.1 ENST00000662102.1 ENST00000668330.1 |
||
| CDS CCA 72 bp | AGCCATTACCTTGGAATCAGAACATGGGCATTTCCTTaGTGTTCCCCTTGGCGGCAGCCGCCTGCTCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SHYLGIRTWAFP*CSPWRQPPALS Trigger: GCTGAGAGCAGGCGGCTGCCGCCAAGGGGAACACCAAGGAAATGCCCATGTTCTGATTCCAAGGTAATGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 |
||
| CDS CCA 72 bp | CCCTTGGGTCTGAGCCATTACCTTGGAATCAGAACATaGGCATTTCCTTGGTGTTCCCCTTGGCGGCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PLGLSHYLGIRT*AFPWCSPWRQP Trigger: CGGCTGCCGCCAAGGGGAACACCAAGGAAATGCCCATGTTCTGATTCCAAGGTAATGGCTCAGACCCAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 |
||
| CDS CAA 72 bp | GAGCCATTACCTTGGAATCAGAACATGGGCATTTCCTaGGTGTTCCCCTTGGCGGCAGCCGCCTGCTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: EPLPWNQNMGIS*VFPLAAAACSQ Trigger: CTGAGAGCAGGCGGCTGCCGCCAAGGGGAACACCAAGGAAATGCCCATGTTCTGATTCCAAGGTAATGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 |
||
| CDS TCA 72 bp | GACTCTTATTTAAGAGGCAGATTTAGGGGCGAGGCCTaGCTAACCCCTGCGGCTCCACTGCATACAGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: DSYLRGRFRGEA*LTPAAPLHTAP Trigger: GGGAGCTGTATGCAGTGGAGCCGCAGGGGTTAGTCAGGCCTCGCCCCTAAATCTGCCTCTTAAATAAGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428078.4 |
||
| CDS GCA 72 bp | ACCCCTGCGGCTCCACTGCATACAGCTCCCTCACACTaGATGGTGTTATCACGCTGCAAGCTGTTACCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: TPAAPLHTAPSH*MVLSRCKLLPN Trigger: ATTGGGTAACAGCTTGCAGCGTGATAACACCATGCAGTGTGAGGGAGCTGTATGCAGTGGAGCCGCAGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428078.4 |
||
| CDS CCA 72 bp | CTGCGGCTCCACTGCATACAGCTCCCTCACACTGCATaGTGTTATCACGCTGCAAGCTGTTACCCAATCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LRLHCIQLPHTA*CYHAASCYPIS Trigger: CGAGATTGGGTAACAGCTTGCAGCGTGATAACACCATGCAGTGTGAGGGAGCTGTATGCAGTGGAGCCGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428078.4 |
||
| CDS CCA 72 bp | ACTGTCTACGCAGGGCCACTGACTGCATTCCTTCCTTaGTGTCTCTGTCTACTGTGGTGGGCTGTAACCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TVYAGPLTAFLP*CLCLLWWAVTL Trigger: GAGGGTTACAGCCCACCACAGTAGACAGAGACACCAAGGAAGGAATGCAGTCAGTGGCCCTGCGTAGACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654656.1 ENST00000662102.1 ENST00000668330.1 |
||
| CDS TCA 72 bp | CATGGTAAAGCACTGTCAGGGATTGGCTGTGCAGACTaGCCTCCACGGAACTGGAAAAGGCAGGTTTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HGKALSGIGCAD*PPRNWKRQVWL Trigger: CAGCCAAACCTGCCTTTTCCAGTTCCGTGGAGGTCAGTCTGCACAGCCAATCCCTGACAGTGCTTTACCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428078.4 |
||
| CDS CAA 90 bp | GATTGGCTGTGCAGACTGACCTCCACGGAACTGGAAAAGGCAGGTTaGGCTGAAACGGACTCTTATTTAAGAGGCAGATTTAGGGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: DWLCRLTSTELEKAG*AETDSYLRGRFRGE Trigger: CTCGCCCCTAAATCTGCCTCTTAAATAAGAGTCCGTTTCAGCCAAACCTGCCTTTTCCAGTTCCGTGGAGGTCAGTCTGCACAGCCAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428078.4 |
||
| CDS TCA 72 bp | TCTTCCTATTACGTCCCATTCTGCTTTAAAAACCTTTaGGAAGCCCGCTGGGCGGATGCCACTTGCCCAATC | + |
|
Preference number: 6 (lower is better) Translates to: SSYYVPFCFKNL*EARWADATCPI Trigger: GATTGGGCAAGTGGCATCCGCCCAGCGGGCTTCTCAAAGGTTTTTAAAGCAGAATGGGACGTAATAGGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000654656.1 ENST00000662102.1 ENST00000668330.1 |
||
| CDS CAA 72 bp | CATGGTTTCAGTTCCATGGTAAAGCACTGTCAGGGATaGGCTGTGCAGACTGACCTCCACGGAACTGGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: HGFSSMVKHCQG*AVQTDLHGTGK Trigger: TTTTCCAGTTCCGTGGAGGTCAGTCTGCACAGCCAATCCCTGACAGTGCTTTACCATGGAACTGAAACCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428078.4 |
||
| CDS CAA 90 bp | TTCACTTTTCATGGTTTCAGTTCCATGGTAAAGCACTGTCAGGGATaGGCTGTGCAGACTGACCTCCACGGAACTGGAAAAGGCAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: FTFHGFSSMVKHCQG*AVQTDLHGTGKGRF Trigger: AAACCTGCCTTTTCCAGTTCCGTGGAGGTCAGTCTGCACAGCCAATCCCTGACAGTGCTTTACCATGGAACTGAAACCATGAAAAGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428078.4 |
||
| CDS CCA 72 bp | AGATGCTGCTCATTTCATAGCCTGATATGGGTCAGGTaGCTACTCTTGACCTTTTTGCTTCAAGTGGTGACT | + |
|
Preference number: 6 (lower is better) Translates to: RCCSFHSLIWVR*LLLTFLLQVVT Trigger: AGTCACCACTTGAAGCAAAAAGGTCAAGAGTAGCCACCTGACCCATATCAGGCTATGAAATGAGCAGCATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662102.1 |
||
| CDS CCA 72 bp | GTAGCAACCAGATGCTGCTCATTTCATAGCCTGATATaGGTCAGGTGGCTACTCTTGACCTTTTTGCTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: VATRCCSFHSLI*VRWLLLTFLLQ Trigger: TTGAAGCAAAAAGGTCAAGAGTAGCCACCTGACCCATATCAGGCTATGAAATGAGCAGCATCTGGTTGCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662102.1 |
||
| CDS TCA 72 bp | AGGTTGCACATTGAACAGATAAAATCCCCTTGGGTCTaGGCCATTACCTTGGAATCAGAACATGGGCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: RLHIEQIKSPWV*AITLESEHGHF Trigger: GAAATGCCCATGTTCTGATTCCAAGGTAATGGCTCAGACCCAAGGGGATTTTATCTGTTCAATGTGCAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 |
||
| CDS CCA 72 bp | TACAGCAGTCTCTCCCATTTGCAGTTTCACTTTTCATaGTTTCAGTTCCATGGTAAAGCACTGTCAGGGATT | + |
|
Preference number: 6 (lower is better) Translates to: YSSLSHLQFHFS*FQFHGKALSGI Trigger: AATCCCTGACAGTGCTTTACCATGGAACTGAAACCATGAAAAGTGAAACTGCAAATGGGAGAGACTGCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428078.4 |
||
| CDS CCA 72 bp | TACAGCAGTCTCTCCCATTTGCAGTTTCACTTTTCATaGTTTCAGTTCCATGGTAAAGCACTGTCCAATCTC | + |
|
Preference number: 6 (lower is better) Translates to: YSSLSHLQFHFS*FQFHGKALSNL Trigger: GAGATTGGACAGTGCTTTACCATGGAACTGAAACCATGAAAAGTGAAACTGCAAATGGGAGAGACTGCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441544.2 |
||
| CDS CAA 90 bp | TCTTCCACACATGGGTCCAAGGTTTCAGTTGTGTCTAATTTGCTGTaGAGCTCATCCATTAATTTTTCAGTGACTATACAGCAGTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSTHGSKVSVVSNLL*SSSINFSVTIQQSL Trigger: GAGAGACTGCTGTATAGTCACTGAAAAATTAATGGATGAGCTCAACAGCAAATTAGACACAACTGAAACCTTGGACCCATGTGTGGAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000428078.4 ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 |
||
| CDS CAA 72 bp | TCCACACATGGGTCCAAGGTTTCAGTTGTGTCTAATTaGCTGTTGAGCTCATCCATTAATTTTTCAGTGACT | + |
|
Preference number: 6 (lower is better) Translates to: STHGSKVSVVSN*LLSSSINFSVT Trigger: AGTCACTGAAAAATTAATGGATGAGCTCAACAGCAAATTAGACACAACTGAAACCTTGGACCCATGTGTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000428078.4 ENST00000441544.2 ENST00000654656.1 ENST00000662102.1 |
||
| CDS CCA 72 bp | TGTTTAGGATTCATTGCAATTCCTAAATCTGTGGGTTaGAGAAGTTCTTTCACCAATTTTGGAAAATTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: CLGFIAIPKSVG*RSSFTNFGKFS Trigger: TGAGAATTTTCCAAAATTGGTGAAAGAACTTCTCCAACCCACAGATTTAGGAATTGCAATGAATCCTAAACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668330.1 |
||
| CDS CAA 72 bp | ATTCTCAGTTCAAATTTCTGTATTGTCCTTCCCTTATaGTTTTATATTCTCCTTCTGGAGCTTCTGTTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ILSSNFCIVLPL*FYILLLELLLD Trigger: GTCTAACAGAAGCTCCAGAAGGAGAATATAAAACAATAAGGGAAGGACAATACAGAAATTTGAACTGAGAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668330.1 |
||