Pregenerated sensors for LINC01655 (Homo sapiens)

Ensembl gene IDs: ENSG00000227925

Ensembl transcript IDs: ENST00000431729.2, ENST00000665303.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	AACAAGGATCCACCCAGCTCAGCTGCCCTGCCAGGGTGTTCTCATTaGCTCGCCAGCTTCAGATCACTCCCCAGGGATGCTGCATTCATT	+
Preference number: 5 (lower is better) Translates to: NKDPPSSAALPGCSH*LASFRSLPRDAAFI Trigger: AATGAATGCAGCATCCCTGGGGAGTGATCTGAAGCTGGCGAGGCAATGAGAACACCCTGGCAGGGCAGCTGAGCTGGGTGGATCCTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431729.2
CDS CAA 90 bp	GAACAAGGATCCACCCAGCTCAGCTGCCCTGCCAGGGTGTTCTCATaGCCTCGCCAGCTTCAGATCACTCCCCAGGGATGCTGCATTCAT	+
Preference number: 6 (lower is better) Translates to: EQGSTQLSCPARVFS*PRQLQITPQGCCIH Trigger: ATGAATGCAGCATCCCTGGGGAGTGATCTGAAGCTGGCGAGGCAATGAGAACACCCTGGCAGGGCAGCTGAGCTGGGTGGATCCTTGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431729.2
CDS CCA 72 bp	CTGGAGCTATGGCAAACAGGAAGGAAAAAGGTGATATaGGGCTTCACTGGAGCATCCAGGAGGGGCCCATTG	+
Preference number: 6 (lower is better) Translates to: LELWQTGRKKVI*GFTGASRRGPL Trigger: CAATGGGCCCCTCCTGGATGCTCCAGTGAAGCCCCATATCACCTTTTTCCTTCCTGTTTGCCATAGCTCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000431729.2 ENST00000665303.1
CDS CAA 90 bp	GTTTGTTCTCTTTGTTTGCCCTTAGTTGGTAAAGAAGACAAGTTGTaGATGAAGGAAACTGGCAAAATATCAGTACATCTTGAGTTCTTT	+
Preference number: 6 (lower is better) Translates to: VCSLCLPLVGKEDKL*MKETGKISVHLEFF Trigger: AAAGAACTCAAGATGTACTGATATTTTGCCAGTTTCCTTCATCAACAACTTGTCTTCTTTACCAACTAAGGGCAAACAAAGAGAACAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665303.1
CDS CAA 90 bp	TTAGTTTGTTCTCTTTGTTTGCCCTTAGTTGGTAAAGAAGACAAGTaGTTGATGAAGGAAACTGGCAAAATATCAGTACATCTTGAGTTC	+
Preference number: 6 (lower is better) Translates to: LVCSLCLPLVGKEDK*LMKETGKISVHLEF Trigger: GAACTCAAGATGTACTGATATTTTGCCAGTTTCCTTCATCAACAACTTGTCTTCTTTACCAACTAAGGGCAAACAAAGAGAACAAACTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665303.1
CDS CAA 72 bp	CTTTGTTTGCCCTTAGTTGGTAAAGAAGACAAGTTGTaGATGAAGGAAACTGGCAAAATATCAGTACATCTT	+
Preference number: 6 (lower is better) Translates to: LCLPLVGKEDKL*MKETGKISVHL Trigger: AAGATGTACTGATATTTTGCCAGTTTCCTTCATCAACAACTTGTCTTCTTTACCAACTAAGGGCAAACAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665303.1
CDS CAA 72 bp	TCTCTTTGTTTGCCCTTAGTTGGTAAAGAAGACAAGTaGTTGATGAAGGAAACTGGCAAAATATCAGTACAT	+
Preference number: 6 (lower is better) Translates to: SLCLPLVGKEDK*LMKETGKISVH Trigger: ATGTACTGATATTTTGCCAGTTTCCTTCATCAACAACTTGTCTTCTTTACCAACTAAGGGCAAACAAAGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665303.1

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