Pregenerated sensors for LINC01654 (Homo sapiens)
Ensembl gene IDs: ENSG00000261781Ensembl transcript IDs: ENST00000569711.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAGACTGGACCAGAGATCACCATAACGTGGTGTGTGCATGACAGGTaGCGGAGCGGGGGATGCAAAGGGTGGGCTGTGGGGCACAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: QTGPEITITWCVHDR*RSGGCKGWAVGHRA Trigger: GGCTCTGTGCCCCACAGCCCACCCTTTGCATCCCCCGCTCCGGCACCTGTCATGCACACACCACGTTATGGTGATCTCTGGTCCAGTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS TCA 90 bp | GCTCGTGTTTCTGTTCTCATCTGCAGGTCAGCCGAGTGGCTCTGCTaGTCACAGGTTGGGGGCTGGCTGGCTGCCGGCTACTCTCTCGGA | + |
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Preference number: 5 (lower is better) Translates to: ARVSVLICRSAEWLC*SQVGGWLAAGYSLG Trigger: TCCGAGAGAGTAGCCGGCAGCCAGCCAGCCCCCAACCTGTGATCAGCAGAGCCACTCGGCTGACCTGCAGATGAGAACAGAAACACGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS GCA 90 bp | GCTGGCTGCCGGCTACTCTCTCGGATGGTCTCAGCAGCTCAGCTCTaGTCCACACATCTCATTCTCCTGCTGGCCAGCCCAGGCACATTC | + |
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Preference number: 5 (lower is better) Translates to: AGCRLLSRMVSAAQL*STHLILLLASPGTF Trigger: GAATGTGCCTGGGCTGGCCAGCAGGAGAATGAGATGTGTGGAGCAGAGCTGAGCTGCTGAGACCATCCGAGAGAGTAGCCGGCAGCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CCA 90 bp | TGTTCTCATCTGCAGGTCAGCCGAGTGGCTCTGCTGATCACAGGTTaGGGGCTGGCTGGCTGCCGGCTACTCTCTCGGATGGTCTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: CSHLQVSRVALLITG*GLAGCRLLSRMVSA Trigger: TGCTGAGACCATCCGAGAGAGTAGCCGGCAGCCAGCCAGCCCCCAACCTGTGATCAGCAGAGCCACTCGGCTGACCTGCAGATGAGAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CCA 90 bp | GGGAGCAGTGCAATAGCTCAGCCTCCGCCCACCTTCCACATCGCCTaGGGCTGTTTAAGAGCCGCCTCCTACTCCTGCAGAGGATTTTGC | + |
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Preference number: 5 (lower is better) Translates to: GSSAIAQPPPTFHIA*GCLRAASYSCRGFC Trigger: GCAAAATCCTCTGCAGGAGTAGGAGGCGGCTCTTAAACAGCCCCAGGCGATGTGGAAGGTGGGCGGAGGCTGAGCTATTGCACTGCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS TCA 90 bp | GGAGACCAGGAAGCCAAAGACAGAGCAGAAAGGCGCGAGGCCCCTTaGGGCCTAGACTCAGGACTGGCCTCTGTTACTTCCGTCGCATTC | + |
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Preference number: 5 (lower is better) Translates to: GDQEAKDRAERREAP*GLDSGLASVTSVAF Trigger: GAATGCGACGGAAGTAACAGAGGCCAGTCCTGAGTCTAGGCCTCAAGGGGCCTCGCGCCTTTCTGCTCTGTCTTTGGCTTCCTGGTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CCA 90 bp | ACACATCTCATTCTCCTGCTGGCCAGCCCAGGCACATTCTCATGGTaGAGACCAGGAAGCCAAAGACAGAGCAGAAAGGCGCGAGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: THLILLLASPGTFSW*RPGSQRQSRKARGP Trigger: GGGGCCTCGCGCCTTTCTGCTCTGTCTTTGGCTTCCTGGTCTCCACCATGAGAATGTGCCTGGGCTGGCCAGCAGGAGAATGAGATGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CCA 90 bp | CAGGCAACAACATATTTGCAGACTGGACCAGAGATCACCATAACGTaGTGTGTGCATGACAGGTGCCGGAGCGGGGGATGCAAAGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: QATTYLQTGPEITIT*CVHDRCRSGGCKGW Trigger: CCACCCTTTGCATCCCCCGCTCCGGCACCTGTCATGCACACACCACGTTATGGTGATCTCTGGTCCAGTCTGCAAATATGTTGTTGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS GCA 90 bp | ACCTTCCACATCGCCTGGGGCTGTTTAAGAGCCGCCTCCTACTCCTaGAGAGGATTTTGCCCTCGGGTTCTCAAAGATACTGTTCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: TFHIAWGCLRAASYS*RGFCPRVLKDTVLS Trigger: AGACAGAACAGTATCTTTGAGAACCCGAGGGCAAAATCCTCTGCAGGAGTAGGAGGCGGCTCTTAAACAGCCCCAGGCGATGTGGAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS GCA 90 bp | CCAGAAGTGGAATTGCTCCCACAGAGTATATGCTATTTGAAAGCCTaGTTTATAGCTTGTCTGAGGGTGATGGAGCCCACCCCGTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: PEVELLPQSICYLKA*FIACLRVMEPTPFP Trigger: GGGGAACGGGGTGGGCTCCATCACCCTCAGACAAGCTATAAAGCAGGCTTTCAAATAGCATATACTCTGTGGGAGCAATTCCACTTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS TCA 90 bp | AAGGAGAAGGGTTTATTGCACAATCCTGAGAGTAACAAGAATCCATaGGGGGTCTTCACCAGGAAGGCTGGGGGAGGCTTAAACCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: KEKGLLHNPESNKNP*GVFTRKAGGGLNQG Trigger: ACCCTGGTTTAAGCCTCCCCCAGCCTTCCTGGTGAAGACCCCTCATGGATTCTTGTTACTCTCAGGATTGTGCAATAAACCCTTCTCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS TCA 90 bp | TCTTCCATTTTCTCCTGGACTTTCCATGAGCAGGTAGTGCCCACCTaGATGCCAGCTGAGCGGAGGTGTCAAACAAGATGCAATACAGTC | + |
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Preference number: 5 (lower is better) Translates to: SSIFSWTFHEQVVPT*MPAERRCQTRCNTV Trigger: GACTGTATTGCATCTTGTTTGACACCTCCGCTCAGCTGGCATTCAGGTGGGCACTACCTGCTCATGGAAAGTCCAGGAGAAAATGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CCA 90 bp | GGATGTCCCACATTTTGTTCATCCATGCATCCGTCAATGAACGCCTaGGTTGCTTCTACCTCTGGGCTATTGTGTATGATGCTGCTACGA | + |
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Preference number: 5 (lower is better) Translates to: GCPTFCSSMHPSMNA*VASTSGLLCMMLLR Trigger: TCGTAGCAGCATCATACACAATAGCCCAGAGGTAGAAGCAACCCAGGCGTTCATTGACGGATGCATGGATGAACAAAATGTGGGACATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS TCA 90 bp | GAGAACTGCAAAGTGACAGGCATGGGATGTAGACACAGGGAAGGTTaGCGCATGAATGCAATCCGTGCAATTCATACCACAGCTTCTAAG | + |
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Preference number: 5 (lower is better) Translates to: ENCKVTGMGCRHREG*RMNAIRAIHTTASK Trigger: CTTAGAAGCTGTGGTATGAATTGCACGGATTGCATTCATGCGTCAACCTTCCCTGTGTCTACATCCCATGCCTGTCACTTTGCAGTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS TCA 90 bp | TACAGTCAGGCCAGAAATAGACTTTCCCGTCACGTCTACTCTGCGTaGAGGAGAAGGGTTTATTGCACAATCCTGAGAGTAACAAGAATC | + |
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Preference number: 5 (lower is better) Translates to: YSQARNRLSRHVYSA*RRRVYCTILRVTRI Trigger: GATTCTTGTTACTCTCAGGATTGTGCAATAAACCCTTCTCCTTCACGCAGAGTAGACGTGACGGGAAAGTCTATTTCTGGCCTGACTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS TCA 90 bp | AGCTTTATCCACGCTGCAGCATCCTTGACAGAATCCCTTTCCTCTTaGAGGCTGAATGTTCCATTGTATGGATGTCCCACATTTTGTTCA | + |
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Preference number: 5 (lower is better) Translates to: SFIHAAASLTESLSS*RLNVPLYGCPTFCS Trigger: TGAACAAAATGTGGGACATCCATACAATGGAACATTCAGCCTTCAAGAGGAAAGGGATTCTGTCAAGGATGCTGCAGCGTGGATAAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CCA 90 bp | CTTGACAGAATCCCTTTCCTCTTGAAGGCTGAATGTTCCATTGTATaGATGTCCCACATTTTGTTCATCCATGCATCCGTCAATGAACGC | + |
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Preference number: 5 (lower is better) Translates to: LDRIPFLLKAECSIV*MSHILFIHASVNER Trigger: GCGTTCATTGACGGATGCATGGATGAACAAAATGTGGGACATCCATACAATGGAACATTCAGCCTTCAAGAGGAAAGGGATTCTGTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS GCA 72 bp | ACGTGGTGTGTGCATGACAGGTGCCGGAGCGGGGGATaGAAAGGGTGGGCTGTGGGGCACAGAGCCAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: TWCVHDRCRSGG*KGWAVGHRARD Trigger: ATCCCTGGCTCTGTGCCCCACAGCCCACCCTTTGCATCCCCCGCTCCGGCACCTGTCATGCACACACCACGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS GCA 72 bp | GTGGCTCTGCTGATCACAGGTTGGGGGCTGGCTGGCTaGCGGCTACTCTCTCGGATGGTCTCAGCAGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: VALLITGWGLAG*RLLSRMVSAAQ Trigger: CTGAGCTGCTGAGACCATCCGAGAGAGTAGCCGGCAGCCAGCCAGCCCCCAACCTGTGATCAGCAGAGCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS TCA 72 bp | TCTGTTCTCATCTGCAGGTCAGCCGAGTGGCTCTGCTaGTCACAGGTTGGGGGCTGGCTGGCTGCCGGCTAC | + |
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Preference number: 6 (lower is better) Translates to: SVLICRSAEWLC*SQVGGWLAAGY Trigger: GTAGCCGGCAGCCAGCCAGCCCCCAACCTGTGATCAGCAGAGCCACTCGGCTGACCTGCAGATGAGAACAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS GCA 72 bp | CCAGAGATCACCATAACGTGGTGTGTGCATGACAGGTaGCGGAGCGGGGGATGCAAAGGGTGGGCTGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: PEITITWCVHDR*RSGGCKGWAVG Trigger: CCCCACAGCCCACCCTTTGCATCCCCCGCTCCGGCACCTGTCATGCACACACCACGTTATGGTGATCTCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CCA 72 bp | GCAATAGCTCAGCCTCCGCCCACCTTCCACATCGCCTaGGGCTGTTTAAGAGCCGCCTCCTACTCCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: AIAQPPPTFHIA*GCLRAASYSCR Trigger: TCTGCAGGAGTAGGAGGCGGCTCTTAAACAGCCCCAGGCGATGTGGAAGGTGGGCGGAGGCTGAGCTATTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CAA 90 bp | TGGAGACCAGGAAGCCAAAGACAGAGCAGAAAGGCGCGAGGCCCCTaGAGGCCTAGACTCAGGACTGGCCTCTGTTACTTCCGTCGCATT | + |
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Preference number: 6 (lower is better) Translates to: WRPGSQRQSRKARGP*RPRLRTGLCYFRRI Trigger: AATGCGACGGAAGTAACAGAGGCCAGTCCTGAGTCTAGGCCTCAAGGGGCCTCGCGCCTTTCTGCTCTGTCTTTGGCTTCCTGGTCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS TCA 72 bp | GAAGCCAAAGACAGAGCAGAAAGGCGCGAGGCCCCTTaGGGCCTAGACTCAGGACTGGCCTCTGTTACTTCC | + |
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Preference number: 6 (lower is better) Translates to: EAKDRAERREAP*GLDSGLASVTS Trigger: GGAAGTAACAGAGGCCAGTCCTGAGTCTAGGCCTCAAGGGGCCTCGCGCCTTTCTGCTCTGTCTTTGGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CAA 72 bp | GGAAGCCAAAGACAGAGCAGAAAGGCGCGAGGCCCCTaGAGGCCTAGACTCAGGACTGGCCTCTGTTACTTC | + |
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Preference number: 6 (lower is better) Translates to: GSQRQSRKARGP*RPRLRTGLCYF Trigger: GAAGTAACAGAGGCCAGTCCTGAGTCTAGGCCTCAAGGGGCCTCGCGCCTTTCTGCTCTGTCTTTGGCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CAA 90 bp | CGCCTGGGGCTGTTTAAGAGCCGCCTCCTACTCCTGCAGAGGATTTaGCCCTCGGGTTCTCAAAGATACTGTTCTGTCTCAGACAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: RLGLFKSRLLLLQRI*PSGSQRYCSVSDRS Trigger: ACTCCTGTCTGAGACAGAACAGTATCTTTGAGAACCCGAGGGCAAAATCCTCTGCAGGAGTAGGAGGCGGCTCTTAAACAGCCCCAGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS TCA 72 bp | TTCTCCTGGACTTTCCATGAGCAGGTAGTGCCCACCTaGATGCCAGCTGAGCGGAGGTGTCAAACAAGATGC | + |
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Preference number: 6 (lower is better) Translates to: FSWTFHEQVVPT*MPAERRCQTRC Trigger: GCATCTTGTTTGACACCTCCGCTCAGCTGGCATTCAGGTGGGCACTACCTGCTCATGGAAAGTCCAGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS GCA 72 bp | ATCGCCTGGGGCTGTTTAAGAGCCGCCTCCTACTCCTaGAGAGGATTTTGCCCTCGGGTTCTCAAAGATACT | + |
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Preference number: 6 (lower is better) Translates to: IAWGCLRAASYS*RGFCPRVLKDT Trigger: AGTATCTTTGAGAACCCGAGGGCAAAATCCTCTGCAGGAGTAGGAGGCGGCTCTTAAACAGCCCCAGGCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CCA 72 bp | CTCAGGACTGGCCTCTGTTACTTCCGTCGCATTCTATaGGTGAAAGCCAGCCCAGACTTAAGGGGTGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: LRTGLCYFRRIL*VKASPDLRGGK Trigger: TTTCCCACCCCTTAAGTCTGGGCTGGCTTTCACCCATAGAATGCGACGGAAGTAACAGAGGCCAGTCCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS GCA 72 bp | GTGGGAAACAGAGTGGGCCTCTTTAGAGAGGAGAACTaGAAAGTGACAGGCATGGGATGTAGACACAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: VGNRVGLFREEN*KVTGMGCRHRE Trigger: TTCCCTGTGTCTACATCCCATGCCTGTCACTTTGCAGTTCTCCTCTCTAAAGAGGCCCACTCTGTTTCCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CCA 72 bp | CATTCTATGGGTGAAAGCCAGCCCAGACTTAAGGGGTaGGAAACAGAGTGGGCCTCTTTAGAGAGGAGAACT | + |
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Preference number: 6 (lower is better) Translates to: HSMGESQPRLKG*ETEWASLERRT Trigger: AGTTCTCCTCTCTAAAGAGGCCCACTCTGTTTCCCACCCCTTAAGTCTGGGCTGGCTTTCACCCATAGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CAA 90 bp | ATTGCTCCCACAGAGTATATGCTATTTGAAAGCCTGCTTTATAGCTaGTCTGAGGGTGATGGAGCCCACCCCGTTCCCCAGAGGGAAACA | + |
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Preference number: 6 (lower is better) Translates to: IAPTEYMLFESLLYS*SEGDGAHPVPQRET Trigger: TGTTTCCCTCTGGGGAACGGGGTGGGCTCCATCACCCTCAGACAAGCTATAAAGCAGGCTTTCAAATAGCATATACTCTGTGGGAGCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS TCA 72 bp | GGTTTATTGCACAATCCTGAGAGTAACAAGAATCCATaGGGGGTCTTCACCAGGAAGGCTGGGGGAGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: GLLHNPESNKNP*GVFTRKAGGGL Trigger: TAAGCCTCCCCCAGCCTTCCTGGTGAAGACCCCTCATGGATTCTTGTTACTCTCAGGATTGTGCAATAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CAA 72 bp | CTGTTTAAGAGCCGCCTCCTACTCCTGCAGAGGATTTaGCCCTCGGGTTCTCAAAGATACTGTTCTGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: LFKSRLLLLQRI*PSGSQRYCSVS Trigger: TGAGACAGAACAGTATCTTTGAGAACCCGAGGGCAAAATCCTCTGCAGGAGTAGGAGGCGGCTCTTAAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CAA 72 bp | CCACGCTGCAGCATCCTTGACAGAATCCCTTTCCTCTaGAAGGCTGAATGTTCCATTGTATGGATGTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: PRCSILDRIPFL*KAECSIVWMSH Trigger: GTGGGACATCCATACAATGGAACATTCAGCCTTCAAGAGGAAAGGGATTCTGTCAAGGATGCTGCAGCGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS TCA 72 bp | CAGGCATGGGATGTAGACACAGGGAAGGTTGACGCATaGATGCAATCCGTGCAATTCATACCACAGCTTCTA | + |
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Preference number: 6 (lower is better) Translates to: QAWDVDTGKVDA*MQSVQFIPQLL Trigger: TAGAAGCTGTGGTATGAATTGCACGGATTGCATTCATGCGTCAACCTTCCCTGTGTCTACATCCCATGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS TCA 72 bp | GATGTCCCACATTTTGTTCATCCATGCATCCGTCAATaGACGCCTGGGTTGCTTCTACCTCTGGGCTATTGT | + |
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Preference number: 6 (lower is better) Translates to: DVPHFVHPCIRQ*TPGLLLPLGYC Trigger: ACAATAGCCCAGAGGTAGAAGCAACCCAGGCGTTCATTGACGGATGCATGGATGAACAAAATGTGGGACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CAA 90 bp | AGCAGCATCCATCGACTGTTTACTTTGTGTCAGGCAACAACATATTaGCAGACTGGACCAGAGATCACCATAACGTGGTGTGTGCATGAC | + |
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Preference number: 6 (lower is better) Translates to: SSIHRLFTLCQATTY*QTGPEITITWCVHD Trigger: GTCATGCACACACCACGTTATGGTGATCTCTGGTCCAGTCTGCAAATATGTTGTTGCCTGACACAAAGTAAACAGTCGATGGATGCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CAA 90 bp | TCCAGCCCAGGTTCAGACTGGTGTAAATACTCAGCCCCTGTGAAATaGACTTGTCTACTGCTCTCTCTCTCTCTCTCTTTCTCTCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: SSPGSDWCKYSAPVK*TCLLLSLSLSFSLK Trigger: TTTGAGAGAGAAAGAGAGAGAGAGAGAGAGCAGTAGACAAGTCAATTTCACAGGGGCTGAGTATTTACACCAGTCTGAACCTGGGCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS TCA 72 bp | AAAGTGACAGGCATGGGATGTAGACACAGGGAAGGTTaGCGCATGAATGCAATCCGTGCAATTCATACCACA | + |
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Preference number: 6 (lower is better) Translates to: KVTGMGCRHREG*RMNAIRAIHTT Trigger: TGTGGTATGAATTGCACGGATTGCATTCATGCGTCAACCTTCCCTGTGTCTACATCCCATGCCTGTCACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS TCA 72 bp | GCCAGAAATAGACTTTCCCGTCACGTCTACTCTGCGTaGAGGAGAAGGGTTTATTGCACAATCCTGAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: ARNRLSRHVYSA*RRRVYCTILRV Trigger: TACTCTCAGGATTGTGCAATAAACCCTTCTCCTTCACGCAGAGTAGACGTGACGGGAAAGTCTATTTCTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS TCA 72 bp | ACGCCTGGGTTGCTTCTACCTCTGGGCTATTGTGTATaGTGCTGCTACGAACATGAGTATGTACACATCTCT | + |
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Preference number: 6 (lower is better) Translates to: TPGLLLPLGYCV*CCYEHEYVHIS Trigger: AGAGATGTGTACATACTCATGTTCGTAGCAGCATCATACACAATAGCCCAGAGGTAGAAGCAACCCAGGCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS GCA 72 bp | GAATTGCTCCCACAGAGTATATGCTATTTGAAAGCCTaGTTTATAGCTTGTCTGAGGGTGATGGAGCCCACC | + |
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Preference number: 6 (lower is better) Translates to: ELLPQSICYLKA*FIACLRVMEPT Trigger: GGTGGGCTCCATCACCCTCAGACAAGCTATAAAGCAGGCTTTCAAATAGCATATACTCTGTGGGAGCAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CAA 72 bp | CCGAACGCCTGGCAACATTTTTCCCTAGGACTTAGCTaGCTCCTTTCGGTGGCTTCTGTATCAGTTATCAAT | + |
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Preference number: 6 (lower is better) Translates to: PNAWQHFSLGLS*LLSVASVSVIN Trigger: ATTGATAACTGATACAGAAGCCACCGAAAGGAGCAAGCTAAGTCCTAGGGAAAAATGTTGCCAGGCGTTCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CAA 90 bp | CTGAGAAGACCGAACGCCTGGCAACATTTTTCCCTAGGACTTAGCTaGCTCCTTTCGGTGGCTTCTGTATCAGTTATCAATTGCTACTAT | + |
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Preference number: 6 (lower is better) Translates to: LRRPNAWQHFSLGLS*LLSVASVSVINCYY Trigger: ATAGTAGCAATTGATAACTGATACAGAAGCCACCGAAAGGAGCAAGCTAAGTCCTAGGGAAAAATGTTGCCAGGCGTTCGGTCTTCTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CAA 90 bp | AATCTATCTCCAGAAGTGGAATTGCTCCCACAGAGTATATGCTATTaGAAAGCCTGCTTTATAGCTTGTCTGAGGGTGATGGAGCCCACC | + |
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Preference number: 6 (lower is better) Translates to: NLSPEVELLPQSICY*KACFIACLRVMEPT Trigger: GGTGGGCTCCATCACCCTCAGACAAGCTATAAAGCAGGCTTTCAAATAGCATATACTCTGTGGGAGCAATTCCACTTCTGGAGATAGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS GCA 72 bp | TTTACTTGGCATACTGTCCTCAAGCTTTATCCACGCTaGAGCATCCTTGACAGAATCCCTTTCCTCTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: FTWHTVLKLYPR*SILDRIPFLLK Trigger: CTTCAAGAGGAAAGGGATTCTGTCAAGGATGCTGCAGCGTGGATAAAGCTTGAGGACAGTATGCCAAGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CCA 72 bp | ACATTTTGTTCATCCATGCATCCGTCAATGAACGCCTaGGTTGCTTCTACCTCTGGGCTATTGTGTATGATG | + |
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Preference number: 6 (lower is better) Translates to: TFCSSMHPSMNA*VASTSGLLCMM Trigger: CATCATACACAATAGCCCAGAGGTAGAAGCAACCCAGGCGTTCATTGACGGATGCATGGATGAACAAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CAA 72 bp | GGTTCAGACTGGTGTAAATACTCAGCCCCTGTGAAATaGACTTGTCTACTGCTCTCTCTCTCTCTCTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: GSDWCKYSAPVK*TCLLLSLSLSF Trigger: GAAAGAGAGAGAGAGAGAGAGCAGTAGACAAGTCAATTTCACAGGGGCTGAGTATTTACACCAGTCTGAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CAA 72 bp | AAGGCTGAATGTTCCATTGTATGGATGTCCCACATTTaGTTCATCCATGCATCCGTCAATGAACGCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: KAECSIVWMSHI*FIHASVNERLG Trigger: ACCCAGGCGTTCATTGACGGATGCATGGATGAACAAAATGTGGGACATCCATACAATGGAACATTCAGCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CCA 72 bp | ATCCCTTTCCTCTTGAAGGCTGAATGTTCCATTGTATaGATGTCCCACATTTTGTTCATCCATGCATCCGTC | + |
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Preference number: 6 (lower is better) Translates to: IPFLLKAECSIV*MSHILFIHASV Trigger: GACGGATGCATGGATGAACAAAATGTGGGACATCCATACAATGGAACATTCAGCCTTCAAGAGGAAAGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CAA 72 bp | CATCGACTGTTTACTTTGTGTCAGGCAACAACATATTaGCAGACTGGACCAGAGATCACCATAACGTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: HRLFTLCQATTY*QTGPEITITWC Trigger: ACACCACGTTATGGTGATCTCTGGTCCAGTCTGCAAATATGTTGTTGCCTGACACAAAGTAAACAGTCGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CAA 72 bp | TCAGGAACATTTGAGACACTTCTCTTTGGTTTTTGGTaGTGCTTTGGGGCTAACATTGGCCTGGAAGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: SGTFETLLFGFW*CFGANIGLEGC Trigger: ACAACCTTCCAGGCCAATGTTAGCCCCAAAGCACAACCAAAAACCAAAGAGAAGTGTCTCAAATGTTCCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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| CDS CAA 90 bp | AACATTGGCCTGGAAGGTTGTCTAATATTTGGAACGTCTGATGTTTaGGCTGACTCAGGGCCAATGAAACAAAGCTGTGTTGGTGATTTC | + |
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Preference number: 6 (lower is better) Translates to: NIGLEGCLIFGTSDV*ADSGPMKQSCVGDF Trigger: GAAATCACCAACACAGCTTTGTTTCATTGGCCCTGAGTCAGCCAAAACATCAGACGTTCCAAATATTAGACAACCTTCCAGGCCAATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569711.1 |
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