Pregenerated sensors for LINC01650 (Homo sapiens)
Ensembl gene IDs: ENSG00000230434Ensembl transcript IDs: ENST00000438093.1, ENST00000650223.1, ENST00000664351.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCTAGGATTCTCTGTGGGTGGGTCTGGTGGGTGCTCACATTCGCCTaGTTCTCTTGTTTTCGACTCTGGGTTCTGCTGGGACCTTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: ARILCGWVWWVLTFA*FSCFRLWVLLGPCL Trigger: CAAACAAGGTCCCAGCAGAACCCAGAGTCGAAAACAAGAGAACCAGGCGAATGTGAGCACCCACCAGACCCACCCACAGAGAATCCTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000438093.1 ENST00000650223.1 ENST00000664351.1 |
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| CDS GCA 90 bp | GGGTGCTCACATTCGCCTGGTTCTCTTGTTTTCGACTCTGGGTTCTaGTGGGACCTTGTTTGCCATCTTGTTTTCTGTAGCTCCTGTTAC | + |
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Preference number: 5 (lower is better) Translates to: GCSHSPGSLVFDSGF*WDLVCHLVFCSSCY Trigger: GTAACAGGAGCTACAGAAAACAAGATGGCAAACAAGGTCCCAGCAGAACCCAGAGTCGAAAACAAGAGAACCAGGCGAATGTGAGCACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000438093.1 ENST00000650223.1 ENST00000664351.1 |
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| CDS GCA 90 bp | GTTTGTAACTTGAGTGTCATGCCCTCTTGCACACCTACTGTAATGTaGCTCCTGGAGTTGTGCAATGAGGCATCCTGGTCTCCACATCCT | + |
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Preference number: 5 (lower is better) Translates to: VCNLSVMPSCTPTVM*LLELCNEASWSPHP Trigger: AGGATGTGGAGACCAGGATGCCTCATTGCACAACTCCAGGAGGCACATTACAGTAGGTGTGCAAGAGGGCATGACACTCAAGTTACAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000438093.1 ENST00000650223.1 ENST00000664351.1 |
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| CDS CCA 90 bp | CATAAAATGACTTCAGTCGCTAGGATTCTCTGTGGGTGGGTCTGGTaGGTGCTCACATTCGCCTGGTTCTCTTGTTTTCGACTCTGGGTT | + |
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Preference number: 5 (lower is better) Translates to: HKMTSVARILCGWVW*VLTFAWFSCFRLWV Trigger: AACCCAGAGTCGAAAACAAGAGAACCAGGCGAATGTGAGCACCCACCAGACCCACCCACAGAGAATCCTAGCGACTGAAGTCATTTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000438093.1 ENST00000650223.1 ENST00000664351.1 |
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| CDS CCA 90 bp | AAACATAAAATGACTTCAGTCGCTAGGATTCTCTGTGGGTGGGTCTaGTGGGTGCTCACATTCGCCTGGTTCTCTTGTTTTCGACTCTGG | + |
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Preference number: 5 (lower is better) Translates to: KHKMTSVARILCGWV*WVLTFAWFSCFRLW Trigger: CCAGAGTCGAAAACAAGAGAACCAGGCGAATGTGAGCACCCACCAGACCCACCCACAGAGAATCCTAGCGACTGAAGTCATTTTATGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000438093.1 ENST00000650223.1 ENST00000664351.1 |
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| CDS TCA 90 bp | CTCCAATTTTCTGGGACTTATCTCAAGTTGAAGGCAAACATAAAATaGCTTCAGTCGCTAGGATTCTCTGTGGGTGGGTCTGGTGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: LQFSGTYLKLKANIK*LQSLGFSVGGSGGC Trigger: GCACCCACCAGACCCACCCACAGAGAATCCTAGCGACTGAAGTCATTTTATGTTTGCCTTCAACTTGAGATAAGTCCCAGAAAATTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000438093.1 ENST00000650223.1 ENST00000664351.1 |
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| CDS GCA 90 bp | CCTGGTTCTCTTGTTTTCGACTCTGGGTTCTGCTGGGACCTTGTTTaGCATCTTGTTTTCTGTAGCTCCTGTTACAGATCTAGCTCCATT | + |
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Preference number: 5 (lower is better) Translates to: PGSLVFDSGFCWDLV*HLVFCSSCYRSSSI Trigger: AATGGAGCTAGATCTGTAACAGGAGCTACAGAAAACAAGATGGCAAACAAGGTCCCAGCAGAACCCAGAGTCGAAAACAAGAGAACCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000438093.1 ENST00000650223.1 ENST00000664351.1 |
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| CDS CCA 90 bp | GAGTTGTGCAATGAGGCATCCTGGTCTCCACATCCTCCAATTTTCTaGGACTTATCTCAAGTTGAAGGCAAACATAAAATGACTTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: ELCNEASWSPHPPIF*DLSQVEGKHKMTSV Trigger: GACTGAAGTCATTTTATGTTTGCCTTCAACTTGAGATAAGTCCCAGAAAATTGGAGGATGTGGAGACCAGGATGCCTCATTGCACAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000438093.1 ENST00000650223.1 ENST00000664351.1 |
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| CDS CCA 72 bp | CTCTGTGGGTGGGTCTGGTGGGTGCTCACATTCGCCTaGTTCTCTTGTTTTCGACTCTGGGTTCTGCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: LCGWVWWVLTFA*FSCFRLWVLLG Trigger: TCCCAGCAGAACCCAGAGTCGAAAACAAGAGAACCAGGCGAATGTGAGCACCCACCAGACCCACCCACAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000438093.1 ENST00000650223.1 ENST00000664351.1 |
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| CDS CAA 90 bp | TCTCTGTGGGTGGGTCTGGTGGGTGCTCACATTCGCCTGGTTCTCTaGTTTTCGACTCTGGGTTCTGCTGGGACCTTGTTTGCCATCTTG | + |
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Preference number: 6 (lower is better) Translates to: SLWVGLVGAHIRLVL*FSTLGSAGTLFAIL Trigger: CAAGATGGCAAACAAGGTCCCAGCAGAACCCAGAGTCGAAAACAAGAGAACCAGGCGAATGTGAGCACCCACCAGACCCACCCACAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000438093.1 ENST00000650223.1 ENST00000664351.1 |
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| CDS CAA 72 bp | GTGGGTCTGGTGGGTGCTCACATTCGCCTGGTTCTCTaGTTTTCGACTCTGGGTTCTGCTGGGACCTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: VGLVGAHIRLVL*FSTLGSAGTLF Trigger: AAACAAGGTCCCAGCAGAACCCAGAGTCGAAAACAAGAGAACCAGGCGAATGTGAGCACCCACCAGACCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000438093.1 ENST00000650223.1 ENST00000664351.1 |
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| CDS CCA 72 bp | ACTTCAGTCGCTAGGATTCTCTGTGGGTGGGTCTGGTaGGTGCTCACATTCGCCTGGTTCTCTTGTTTTCGA | + |
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Preference number: 6 (lower is better) Translates to: TSVARILCGWVW*VLTFAWFSCFR Trigger: TCGAAAACAAGAGAACCAGGCGAATGTGAGCACCCACCAGACCCACCCACAGAGAATCCTAGCGACTGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000438093.1 ENST00000650223.1 ENST00000664351.1 |
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| CDS CAA 90 bp | AGTGTCATGCCCTCTTGCACACCTACTGTAATGTGCCTCCTGGAGTaGTGCAATGAGGCATCCTGGTCTCCACATCCTCCAATTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SVMPSCTPTVMCLLE*CNEASWSPHPPIFW Trigger: CCAGAAAATTGGAGGATGTGGAGACCAGGATGCCTCATTGCACAACTCCAGGAGGCACATTACAGTAGGTGTGCAAGAGGGCATGACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000438093.1 ENST00000650223.1 ENST00000664351.1 |
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| CDS CCA 72 bp | ATGACTTCAGTCGCTAGGATTCTCTGTGGGTGGGTCTaGTGGGTGCTCACATTCGCCTGGTTCTCTTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: MTSVARILCGWV*WVLTFAWFSCF Trigger: AAAACAAGAGAACCAGGCGAATGTGAGCACCCACCAGACCCACCCACAGAGAATCCTAGCGACTGAAGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000438093.1 ENST00000650223.1 ENST00000664351.1 |
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| CDS GCA 72 bp | CATTCGCCTGGTTCTCTTGTTTTCGACTCTGGGTTCTaGTGGGACCTTGTTTGCCATCTTGTTTTCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: HSPGSLVFDSGF*WDLVCHLVFCS Trigger: GCTACAGAAAACAAGATGGCAAACAAGGTCCCAGCAGAACCCAGAGTCGAAAACAAGAGAACCAGGCGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000438093.1 ENST00000650223.1 ENST00000664351.1 |
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| CDS CCA 72 bp | GTGCTCACATTCGCCTGGTTCTCTTGTTTTCGACTCTaGGTTCTGCTGGGACCTTGTTTGCCATCTTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: VLTFAWFSCFRL*VLLGPCLPSCF Trigger: AAAACAAGATGGCAAACAAGGTCCCAGCAGAACCCAGAGTCGAAAACAAGAGAACCAGGCGAATGTGAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000438093.1 ENST00000650223.1 ENST00000664351.1 |
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| CDS CAA 72 bp | TCGACTCTGGGTTCTGCTGGGACCTTGTTTGCCATCTaGTTTTCTGTAGCTCCTGTTACAGATCTAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: STLGSAGTLFAI*FSVAPVTDLAP Trigger: TGGAGCTAGATCTGTAACAGGAGCTACAGAAAACAAGATGGCAAACAAGGTCCCAGCAGAACCCAGAGTCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000438093.1 ENST00000650223.1 ENST00000664351.1 |
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| CDS CAA 90 bp | ATTCGCCTGGTTCTCTTGTTTTCGACTCTGGGTTCTGCTGGGACCTaGTTTGCCATCTTGTTTTCTGTAGCTCCTGTTACAGATCTAGCT | + |
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Preference number: 6 (lower is better) Translates to: IRLVLLFSTLGSAGT*FAILFSVAPVTDLA Trigger: AGCTAGATCTGTAACAGGAGCTACAGAAAACAAGATGGCAAACAAGGTCCCAGCAGAACCCAGAGTCGAAAACAAGAGAACCAGGCGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000438093.1 ENST00000650223.1 ENST00000664351.1 |
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| CDS TCA 72 bp | ACAGATCCAGAAGGCCAAACAGACTTAGAACTGGTCTaGACATGTTCTGAGCATGATTTGAGCTTGGGACAC | + |
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Preference number: 6 (lower is better) Translates to: TDPEGQTDLELV*TCSEHDLSLGH Trigger: GTGTCCCAAGCTCAAATCATGCTCAGAACATGTTCAGACCAGTTCTAAGTCTGTTTGGCCTTCTGGATCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650223.1 ENST00000664351.1 |
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| CDS CCA 72 bp | CATGTGGTTCCCATCTTCATACTGGTGAAACGTCACTaGATTCTGGCGTTGGTAGAAGAGGAGTTCATTCAA | + |
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Preference number: 6 (lower is better) Translates to: HVVPIFILVKRH*ILALVEEEFIQ Trigger: TTGAATGAACTCCTCTTCTACCAACGCCAGAATCCAGTGACGTTTCACCAGTATGAAGATGGGAACCACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650223.1 ENST00000664351.1 |
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| CDS CAA 72 bp | GTTCTCTTGTTTTCGACTCTGGGTTCTGCTGGGACCTaGTTTGCCATCTTGTTTTCTGTAGCTCCTGTTACA | + |
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Preference number: 6 (lower is better) Translates to: VLLFSTLGSAGT*FAILFSVAPVT Trigger: TGTAACAGGAGCTACAGAAAACAAGATGGCAAACAAGGTCCCAGCAGAACCCAGAGTCGAAAACAAGAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000438093.1 ENST00000650223.1 ENST00000664351.1 |
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| CDS TCA 72 bp | TCTGGGACTTATCTCAAGTTGAAGGCAAACATAAAATaGCTTCAGTCGCTAGGATTCTCTGTGGGTGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SGTYLKLKANIK*LQSLGFSVGGS Trigger: AGACCCACCCACAGAGAATCCTAGCGACTGAAGTCATTTTATGTTTGCCTTCAACTTGAGATAAGTCCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000438093.1 ENST00000650223.1 ENST00000664351.1 |
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| CDS CAA 72 bp | TCAAATAGGCCATTCACATGGCTTGGGTTTGTGCCTTaGTATGAGTTATCCATGGCACGGATGATATTCAGC | + |
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Preference number: 6 (lower is better) Translates to: SNRPFTWLGFVP*YELSMARMIFS Trigger: GCTGAATATCATCCGTGCCATGGATAACTCATACAAAGGCACAAACCCAAGCCATGTGAATGGCCTATTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650223.1 ENST00000664351.1 |
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| CDS TCA 72 bp | GGTTTGTGCCTTTGTATGAGTTATCCATGGCACGGATaGTATTCAGCGAATTATCCCACATATGGCACAAAA | + |
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Preference number: 6 (lower is better) Translates to: GLCLCMSYPWHG*YSANYPTYGTK Trigger: TTTTGTGCCATATGTGGGATAATTCGCTGAATATCATCCGTGCCATGGATAACTCATACAAAGGCACAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650223.1 ENST00000664351.1 |
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| CDS CAA 90 bp | AGATCTAGCTCCATTCTCCTTCATTCCCTAAAGACAATAGGAAAGTaGTTGTACACAGCAGATTTTACTGAGGGTTTTGATGATGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: RSSSILLHSLKTIGK*LYTADFTEGFDDGG Trigger: TCCTCCATCATCAAAACCCTCAGTAAAATCTGCTGTGTACAACAACTTTCCTATTGTCTTTAGGGAATGAAGGAGAATGGAGCTAGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650223.1 |
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| CDS CCA 72 bp | AAAAGGCTAGAAATAAGGAAAATTCTGCAAGTATTCTaGACCACAGATCCAGAAGGCCAAACAGACTTAGAA | + |
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Preference number: 6 (lower is better) Translates to: KRLEIRKILQVF*TTDPEGQTDLE Trigger: TTCTAAGTCTGTTTGGCCTTCTGGATCTGTGGTCCAGAATACTTGCAGAATTTTCCTTATTTCTAGCCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000650223.1 ENST00000664351.1 |
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| CDS CAA 72 bp | TCCATTCTCCTTCATTCCCTAAAGACAATAGGAAAGTaGTTGTACACAGCAGATTTTACTGAGGGTTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: SILLHSLKTIGK*LYTADFTEGFD Trigger: ATCAAAACCCTCAGTAAAATCTGCTGTGTACAACAACTTTCCTATTGTCTTTAGGGAATGAAGGAGAATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650223.1 |
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| CDS CAA 72 bp | ATTCTCCTTCATTCCCTAAAGACAATAGGAAAGTTGTaGTACACAGCAGATTTTACTGAGGGTTTTGATGAT | + |
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Preference number: 6 (lower is better) Translates to: ILLHSLKTIGKL*YTADFTEGFDD Trigger: ATCATCAAAACCCTCAGTAAAATCTGCTGTGTACAACAACTTTCCTATTGTCTTTAGGGAATGAAGGAGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650223.1 |
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