Pregenerated sensors for LINC01649 (Homo sapiens)
Ensembl gene IDs: ENSG00000228127Ensembl transcript IDs: ENST00000438885.3, ENST00000634255.2, ENST00000659309.1, ENST00000659738.1, ENST00000665767.1, ENST00000669586.1, ENST00000671350.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TTAAGCAAGCGCAATATTCATCTGTGCGATCCATCTTCAGTGAAATaGAGCCTCCTGACCTTTTGCCAGCTTAGCCCCGCTGTCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: LSKRNIHLCDPSSVK*SLLTFCQLSPAVSS Trigger: GCTGCTGACAGCGGGGCTAAGCTGGCAAAAGGTCAGGAGGCTGCATTTCACTGAAGATGGATCGCACAGATGAATATTGCGCTTGCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000438885.3 ENST00000634255.2 ENST00000659309.1 ENST00000659738.1 ENST00000665767.1 ENST00000669586.1 ENST00000671350.1 |
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| CDS CCA 90 bp | TTCTTCTTGCTGTCTTCAGTTTCTGGGTGGGATGGCAGAACAAGTTaGGCCAGTTTACCAGTCTGGGTGGTGCCAGTTGGTTCATCAGGA | + |
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Preference number: 5 (lower is better) Translates to: FFLLSSVSGWDGRTS*ASLPVWVVPVGSSG Trigger: TCCTGATGAACCAACTGGCACCACCCAGACTGGTAAACTGGCCCAACTTGTTCTGCCATCCCACCCAGAAACTGAAGACAGCAAGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000634255.2 ENST00000659738.1 ENST00000669586.1 ENST00000671350.1 |
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| CDS GCA 90 bp | TTACCAGTCTGGGTGGTGCCAGTTGGTTCATCAGGATGCAGGGTCTaGAGAATGAAGGTAGGAATGTCGGCTCCATATATCTCACAGAGT | + |
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Preference number: 5 (lower is better) Translates to: LPVWVVPVGSSGCRV*RMKVGMSAPYISQS Trigger: ACTCTGTGAGATATATGGAGCCGACATTCCTACCTTCATTCTGCAGACCCTGCATCCTGATGAACCAACTGGCACCACCCAGACTGGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671350.1 |
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| CDS CCA 90 bp | AATCATAGGGGGTTGAAGCAGGTTCTTCTTGCTGTCTTCAGTTTCTaGGTGGGATGGCAGAACAAGTTGGGCCAGTTTACCAGTCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: NHRGLKQVLLAVFSF*VGWQNKLGQFTSLG Trigger: ACCCAGACTGGTAAACTGGCCCAACTTGTTCTGCCATCCCACCCAGAAACTGAAGACAGCAAGAAGAACCTGCTTCAACCCCCTATGATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000634255.2 ENST00000659738.1 ENST00000669586.1 ENST00000671350.1 |
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| CDS TCA 90 bp | TCGCTGAGCACTGACAAACTCAATTTACGAAAGGCAAGAGTGAGTTaGCACCATGCTGTGGCAGTTGTCCTGATGGGAGGAAACGACTCA | + |
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Preference number: 5 (lower is better) Translates to: SLSTDKLNLRKARVS*HHAVAVVLMGGNDS Trigger: TGAGTCGTTTCCTCCCATCAGGACAACTGCCACAGCATGGTGTCAACTCACTCTTGCCTTTCGTAAATTGAGTTTGTCAGTGCTCAGCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000438885.3 ENST00000634255.2 ENST00000659309.1 ENST00000659738.1 ENST00000665767.1 ENST00000669586.1 ENST00000671350.1 |
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| CDS TCA 90 bp | CAGCCCGCATCACACAACATTTCACTCAGCTGTGTCGCTGAGCACTaGCAAACTCAATTTACGAAAGGCAAGAGTGAGTTGACACCATGC | + |
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Preference number: 5 (lower is better) Translates to: QPASHNISLSCVAEH*QTQFTKGKSELTPC Trigger: GCATGGTGTCAACTCACTCTTGCCTTTCGTAAATTGAGTTTGTCAGTGCTCAGCGACACAGCTGAGTGAAATGTTGTGTGATGCGGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000438885.3 ENST00000634255.2 ENST00000659309.1 ENST00000659738.1 ENST00000665767.1 ENST00000669586.1 ENST00000671350.1 |
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| CDS CCA 90 bp | TGGCAGAACAAGTTGGGCCAGTTTACCAGTCTGGGTGGTGCCAGTTaGTTCATCAGGATGCAGGGTCTGAAAAATATCTGCAGAATGAAG | + |
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Preference number: 5 (lower is better) Translates to: WQNKLGQFTSLGGAS*FIRMQGLKNICRMK Trigger: CTTCATTCTGCAGATATTTTTCAGACCCTGCATCCTGATGAACCAACTGGCACCACCCAGACTGGTAAACTGGCCCAACTTGTTCTGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000634255.2 ENST00000659738.1 |
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| CDS CCA 90 bp | TGGCAGAACAAGTTGGGCCAGTTTACCAGTCTGGGTGGTGCCAGTTaGTTCATCAGGATGCAGGGTCTGAAAAATATCTCAAACACCAAT | + |
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Preference number: 5 (lower is better) Translates to: WQNKLGQFTSLGGAS*FIRMQGLKNISNTN Trigger: ATTGGTGTTTGAGATATTTTTCAGACCCTGCATCCTGATGAACCAACTGGCACCACCCAGACTGGTAAACTGGCCCAACTTGTTCTGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669586.1 |
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| CDS TCA 90 bp | GCTTGGTTCTGCAGCTCTCTAGAGTGGAGCAGATGTCGACAGCTCTaGAAGATCCCATGCTATTACACAGCAGAACAAATGAGAATGTCA | + |
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Preference number: 5 (lower is better) Translates to: AWFCSSLEWSRCRQL*KIPCYYTAEQMRMS Trigger: TGACATTCTCATTTGTTCTGCTGTGTAATAGCATGGGATCTTTCAGAGCTGTCGACATCTGCTCCACTCTAGAGAGCTGCAGAACCAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659309.1 |
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| CDS GCA 90 bp | TCATTCACGCTTCTTTGTTTCTGGATCCCATTAGGATGTGGTTTATaGCAGTTTCTCTCTCCCAGGAGACAGCCCGCATCACACAACATT | + |
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Preference number: 5 (lower is better) Translates to: SFTLLCFWIPLGCGL*QFLSPRRQPASHNI Trigger: AATGTTGTGTGATGCGGGCTGTCTCCTGGGAGAGAGAAACTGGCATAAACCACATCCTAATGGGATCCAGAAACAAAGAAGCGTGAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000438885.3 ENST00000634255.2 ENST00000659309.1 ENST00000659738.1 ENST00000665767.1 ENST00000669586.1 ENST00000671350.1 |
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| CDS GCA 90 bp | GGTGGTGCCAGTTGGTTCATCAGGATGCAGGGTCTGAAAAATATCTaGAGAATGAAGGTAGGAATGTCGGCTCCATATATCTCACAGAGT | + |
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Preference number: 5 (lower is better) Translates to: GGASWFIRMQGLKNI*RMKVGMSAPYISQS Trigger: ACTCTGTGAGATATATGGAGCCGACATTCCTACCTTCATTCTGCAGATATTTTTCAGACCCTGCATCCTGATGAACCAACTGGCACCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000634255.2 ENST00000659738.1 |
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| CDS GCA 90 bp | CTCATCTCTTGCATTCTTTTCAGCCCATTTGGGCATAATTATTATTaGTCTGCTGGCTTGGTTCTGCAGCTCTCTAGAGTGGAGCAGATG | + |
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Preference number: 5 (lower is better) Translates to: LISCILFSPFGHNYY*SAGLVLQLSRVEQM Trigger: CATCTGCTCCACTCTAGAGAGCTGCAGAACCAAGCCAGCAGAGCAATAATAATTATGCCCAAATGGGCTGAAAAGAATGCAAGAGATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659309.1 |
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| CDS CCA 90 bp | GTCTTTATGAATGCAATTAACACTTCATTCACGCTTCTTTGTTTCTaGATCCCATTAGGATGTGGTTTATGCCAGTTTCTCTCTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: VFMNAINTSFTLLCF*IPLGCGLCQFLSPR Trigger: CCTGGGAGAGAGAAACTGGCATAAACCACATCCTAATGGGATCCAGAAACAAAGAAGCGTGAATGAAGTGTTAATTGCATTCATAAAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000438885.3 ENST00000634255.2 ENST00000659309.1 ENST00000659738.1 ENST00000665767.1 ENST00000669586.1 ENST00000671350.1 |
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| CDS GCA 90 bp | ATCCTGAGACTTTACTTAATGTCTTTGAGTTTTAGCTTTCTTACCTaGAGAATGAAGGTAGGAATGTCGGCTCCATATATCTCACAGAGT | + |
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Preference number: 5 (lower is better) Translates to: ILRLYLMSLSFSFLT*RMKVGMSAPYISQS Trigger: ACTCTGTGAGATATATGGAGCCGACATTCCTACCTTCATTCTGCAGGTAAGAAAGCTAAAACTCAAAGACATTAAGTAAAGTCTCAGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000438885.3 ENST00000665767.1 |
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| CDS CCA 90 bp | ACCAGTTGCACATATCTACAAAATGATTGGCTGGGATTAGTGGCGTaGTCTATGAAGGTGAAATTGAGTGAAACAAGAAGAACCATAAAA | + |
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Preference number: 5 (lower is better) Translates to: TSCTYLQNDWLGLVA*SMKVKLSETRRTIK Trigger: TTTTATGGTTCTTCTTGTTTCACTCAATTTCACCTTCATAGACCACGCCACTAATCCCAGCCAATCATTTTGTAGATATGTGCAACTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000438885.3 ENST00000634255.2 ENST00000659309.1 ENST00000659738.1 ENST00000665767.1 ENST00000669586.1 ENST00000671350.1 |
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| CDS CAA 72 bp | CCACAGGGCTGGGGAGGGAGCCCCGGGTTGCCCACATaGCAGATCATCTCAGGAATATTCAAGAGGGACTGT | + |
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Preference number: 6 (lower is better) Translates to: PQGWGGSPGLPT*QIISGIFKRDC Trigger: ACAGTCCCTCTTGAATATTCCTGAGATGATCTGCAATGTGGGCAACCCGGGGCTCCCTCCCCAGCCCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000438885.3 ENST00000634255.2 ENST00000659309.1 ENST00000659738.1 ENST00000665767.1 ENST00000669586.1 ENST00000671350.1 |
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| CDS CAA 72 bp | GCTGTCTTCAGTTTCTGGGTGGGATGGCAGAACAAGTaGGGCCAGTTTACCAGTCTGGGTGGTGCCAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: AVFSFWVGWQNK*GQFTSLGGASW Trigger: CCAACTGGCACCACCCAGACTGGTAAACTGGCCCAACTTGTTCTGCCATCCCACCCAGAAACTGAAGACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000634255.2 ENST00000659738.1 ENST00000669586.1 ENST00000671350.1 |
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| CDS GCA 72 bp | GCAGAACAAGTTGGGCCAGTTTACCAGTCTGGGTGGTaGCAGTTGGTTCATCAGGATGCAGGGTCTGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: AEQVGPVYQSGW*QLVHQDAGSAE Trigger: TTCTGCAGACCCTGCATCCTGATGAACCAACTGGCACCACCCAGACTGGTAAACTGGCCCAACTTGTTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671350.1 |
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| CDS CCA 72 bp | CTGTCTTCAGTTTCTGGGTGGGATGGCAGAACAAGTTaGGCCAGTTTACCAGTCTGGGTGGTGCCAGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: LSSVSGWDGRTS*ASLPVWVVPVG Trigger: ACCAACTGGCACCACCCAGACTGGTAAACTGGCCCAACTTGTTCTGCCATCCCACCCAGAAACTGAAGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000634255.2 ENST00000659738.1 ENST00000669586.1 ENST00000671350.1 |
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| CDS CCA 72 bp | AAGTTGGGCCAGTTTACCAGTCTGGGTGGTGCCAGTTaGTTCATCAGGATGCAGGGTCTGCAGAATGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: KLGQFTSLGGAS*FIRMQGLQNEG Trigger: ACCTTCATTCTGCAGACCCTGCATCCTGATGAACCAACTGGCACCACCCAGACTGGTAAACTGGCCCAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671350.1 |
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| CDS CAA 90 bp | GTTCTTCTTGCTGTCTTCAGTTTCTGGGTGGGATGGCAGAACAAGTaGGGCCAGTTTACCAGTCTGGGTGGTGCCAGTTGGTTCATCAGG | + |
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Preference number: 6 (lower is better) Translates to: VLLAVFSFWVGWQNK*GQFTSLGGASWFIR Trigger: CCTGATGAACCAACTGGCACCACCCAGACTGGTAAACTGGCCCAACTTGTTCTGCCATCCCACCCAGAAACTGAAGACAGCAAGAAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000634255.2 ENST00000659738.1 ENST00000669586.1 ENST00000671350.1 |
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| CDS GCA 72 bp | CGCAATATTCATCTGTGCGATCCATCTTCAGTGAAATaGAGCCTCCTGACCTTTTGCCAGCTTAGCCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: RNIHLCDPSSVK*SLLTFCQLSPA Trigger: AGCGGGGCTAAGCTGGCAAAAGGTCAGGAGGCTGCATTTCACTGAAGATGGATCGCACAGATGAATATTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000438885.3 ENST00000634255.2 ENST00000659309.1 ENST00000659738.1 ENST00000665767.1 ENST00000669586.1 ENST00000671350.1 |
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| CDS GCA 72 bp | TGGGTGGTGCCAGTTGGTTCATCAGGATGCAGGGTCTaGAGAATGAAGGTAGGAATGTCGGCTCCATATATC | + |
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Preference number: 6 (lower is better) Translates to: WVVPVGSSGCRV*RMKVGMSAPYI Trigger: GATATATGGAGCCGACATTCCTACCTTCATTCTGCAGACCCTGCATCCTGATGAACCAACTGGCACCACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671350.1 |
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| CDS CCA 72 bp | CAGGTTCTTCTTGCTGTCTTCAGTTTCTGGGTGGGATaGCAGAACAAGTTGGGCCAGTTTACCAGTCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: QVLLAVFSFWVG*QNKLGQFTSLG Trigger: ACCCAGACTGGTAAACTGGCCCAACTTGTTCTGCCATCCCACCCAGAAACTGAAGACAGCAAGAAGAACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000634255.2 ENST00000659738.1 ENST00000669586.1 ENST00000671350.1 |
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| CDS CCA 72 bp | GGGTTGAAGCAGGTTCTTCTTGCTGTCTTCAGTTTCTaGGTGGGATGGCAGAACAAGTTGGGCCAGTTTACC | + |
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Preference number: 6 (lower is better) Translates to: GLKQVLLAVFSF*VGWQNKLGQFT Trigger: GGTAAACTGGCCCAACTTGTTCTGCCATCCCACCCAGAAACTGAAGACAGCAAGAAGAACCTGCTTCAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000634255.2 ENST00000659738.1 ENST00000669586.1 ENST00000671350.1 |
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| CDS TCA 72 bp | TGCTTTGGTTGGGTTGGGGCTGAAATCATAGGGGGTTaGAGCAGGTTCTTCTTGCTGTCTTCAGTTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: CFGWVGAEIIGG*SRFFLLSSVSG Trigger: CCCAGAAACTGAAGACAGCAAGAAGAACCTGCTTCAACCCCCTATGATTTCAGCCCCAACCCAACCAAAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000634255.2 ENST00000659738.1 ENST00000669586.1 ENST00000671350.1 |
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| CDS GCA 72 bp | ACTCAATTTACGAAAGGCAAGAGTGAGTTGACACCATaGTGTGGCAGTTGTCCTGATGGGAGGAAACGACTC | + |
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Preference number: 6 (lower is better) Translates to: TQFTKGKSELTP*CGSCPDGRKRL Trigger: GAGTCGTTTCCTCCCATCAGGACAACTGCCACAGCATGGTGTCAACTCACTCTTGCCTTTCGTAAATTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000438885.3 ENST00000634255.2 ENST00000659309.1 ENST00000659738.1 ENST00000665767.1 ENST00000669586.1 ENST00000671350.1 |
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| CDS GCA 72 bp | CTTCTTTGTTTCTGGATCCCATTAGGATGTGGTTTATaGCAGTTTCTCTCTCCCAGGAGACAGCCCGCATCA | + |
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Preference number: 6 (lower is better) Translates to: LLCFWIPLGCGL*QFLSPRRQPAS Trigger: TGATGCGGGCTGTCTCCTGGGAGAGAGAAACTGGCATAAACCACATCCTAATGGGATCCAGAAACAAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000438885.3 ENST00000634255.2 ENST00000659309.1 ENST00000659738.1 ENST00000665767.1 ENST00000669586.1 ENST00000671350.1 |
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| CDS CCA 72 bp | GATGAGACCTTTCAGGGGACTGTATGCATCAATACCTaGTATGTTTGTCAGCCCATCCCCAGCAGTGTTCTA | + |
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Preference number: 6 (lower is better) Translates to: DETFQGTVCINT*YVCQPIPSSVL Trigger: TAGAACACTGCTGGGGATGGGCTGACAAACATACCAGGTATTGATGCATACAGTCCCCTGAAAGGTCTCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000438885.3 ENST00000659738.1 |
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| CDS CAA 72 bp | AGCCCATTTGGGCATAATTATTATTGCTCTGCTGGCTaGGTTCTGCAGCTCTCTAGAGTGGAGCAGATGTCG | + |
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Preference number: 6 (lower is better) Translates to: SPFGHNYYCSAG*VLQLSRVEQMS Trigger: CGACATCTGCTCCACTCTAGAGAGCTGCAGAACCAAGCCAGCAGAGCAATAATAATTATGCCCAAATGGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659309.1 |
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| CDS CAA 90 bp | ATGGCAGAACAAGTTGGGCCAGTTTACCAGTCTGGGTGGTGCCAGTaGGTTCATCAGGATGCAGGGTCTGAAAAATATCTGCAGAATGAA | + |
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Preference number: 6 (lower is better) Translates to: MAEQVGPVYQSGWCQ*VHQDAGSEKYLQNE Trigger: TTCATTCTGCAGATATTTTTCAGACCCTGCATCCTGATGAACCAACTGGCACCACCCAGACTGGTAAACTGGCCCAACTTGTTCTGCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000634255.2 ENST00000659738.1 |
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| CDS CAA 90 bp | ATGGCAGAACAAGTTGGGCCAGTTTACCAGTCTGGGTGGTGCCAGTaGGTTCATCAGGATGCAGGGTCTGAAAAATATCTCAAACACCAA | + |
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Preference number: 6 (lower is better) Translates to: MAEQVGPVYQSGWCQ*VHQDAGSEKYLKHQ Trigger: TTGGTGTTTGAGATATTTTTCAGACCCTGCATCCTGATGAACCAACTGGCACCACCCAGACTGGTAAACTGGCCCAACTTGTTCTGCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669586.1 |
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| CDS CAA 90 bp | ATTCTTTTCAGCCCATTTGGGCATAATTATTATTGCTCTGCTGGCTaGGTTCTGCAGCTCTCTAGAGTGGAGCAGATGTCGACAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: ILFSPFGHNYYCSAG*VLQLSRVEQMSTAL Trigger: CAGAGCTGTCGACATCTGCTCCACTCTAGAGAGCTGCAGAACCAAGCCAGCAGAGCAATAATAATTATGCCCAAATGGGCTGAAAAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659309.1 |
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| CDS TCA 72 bp | ACTGACAAACTCAATTTACGAAAGGCAAGAGTGAGTTaGCACCATGCTGTGGCAGTTGTCCTGATGGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: TDKLNLRKARVS*HHAVAVVLMGG Trigger: TCCTCCCATCAGGACAACTGCCACAGCATGGTGTCAACTCACTCTTGCCTTTCGTAAATTGAGTTTGTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000438885.3 ENST00000634255.2 ENST00000659309.1 ENST00000659738.1 ENST00000665767.1 ENST00000669586.1 ENST00000671350.1 |
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| CDS GCA 72 bp | GCCTTGACTTCATTAAGCAAGCGCAATATTCATCTGTaGGATCCATCTTCAGTGAAATGCAGCCTCCTGACC | + |
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Preference number: 6 (lower is better) Translates to: ALTSLSKRNIHL*DPSSVKCSLLT Trigger: GGTCAGGAGGCTGCATTTCACTGAAGATGGATCGCACAGATGAATATTGCGCTTGCTTAATGAAGTCAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000438885.3 ENST00000634255.2 ENST00000659309.1 ENST00000659738.1 ENST00000665767.1 ENST00000669586.1 ENST00000671350.1 |
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| CDS CAA 72 bp | CTTTCAGGGGACTGTATGCATCAATACCTGGTATGTTaGTCAGCCCATCCCCAGCAGTGTTCTAATACTCCT | + |
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Preference number: 6 (lower is better) Translates to: LSGDCMHQYLVC*SAHPQQCSNTP Trigger: AGGAGTATTAGAACACTGCTGGGGATGGGCTGACAAACATACCAGGTATTGATGCATACAGTCCCCTGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000438885.3 ENST00000659738.1 |
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| CDS CCA 72 bp | CCCTTAGTCACCAGTTGCACATATCTACAAAATGATTaGCTGGGATTAGTGGCGTGGTCTATGAAGGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: PLVTSCTYLQND*LGLVAWSMKVK Trigger: TTTCACCTTCATAGACCACGCCACTAATCCCAGCCAATCATTTTGTAGATATGTGCAACTGGTGACTAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000438885.3 ENST00000634255.2 ENST00000659309.1 ENST00000659738.1 ENST00000665767.1 ENST00000669586.1 ENST00000671350.1 |
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| CDS TCA 72 bp | TGTTATGTGGCAAGCACTGTCATAGAGAAACTAGTATaGTATCATTCCTGCCTTGAAGAGGCTAAGTTAGTT | + |
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Preference number: 6 (lower is better) Translates to: CYVASTVIEKLV*YHSCLEEAKLV Trigger: AACTAACTTAGCCTCTTCAAGGCAGGAATGATATCATACTAGTTTCTCTATGACAGTGCTTGCCACATAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659309.1 |
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| CDS CCA 72 bp | AATGCAATTAACACTTCATTCACGCTTCTTTGTTTCTaGATCCCATTAGGATGTGGTTTATGCCAGTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: NAINTSFTLLCF*IPLGCGLCQFL Trigger: GAGAAACTGGCATAAACCACATCCTAATGGGATCCAGAAACAAAGAAGCGTGAATGAAGTGTTAATTGCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000438885.3 ENST00000634255.2 ENST00000659309.1 ENST00000659738.1 ENST00000665767.1 ENST00000669586.1 ENST00000671350.1 |
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| CDS GCA 72 bp | ATTCATTTACTTTTATCTAGTCCCTTAGTCACCAGTTaGACATATCTACAAAATGATTGGCTGGGATTAGTG | + |
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Preference number: 6 (lower is better) Translates to: IHLLLSSPLVTS*TYLQNDWLGLV Trigger: CACTAATCCCAGCCAATCATTTTGTAGATATGTGCAACTGGTGACTAAGGGACTAGATAAAAGTAAATGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000438885.3 ENST00000634255.2 ENST00000659309.1 ENST00000659738.1 ENST00000665767.1 ENST00000669586.1 ENST00000671350.1 |
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