RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC01648 (Homo sapiens)

Ensembl gene IDs: ENSG00000233399

Ensembl transcript IDs: ENST00000445180.2

Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp TGGGCTCAGACGGTTCCAGAGGCTCCAGATGGCTCCAGGAGCCCTTaGGGGCTCAGAGCTAAAATCTGGCCCTGGCCTGACTCCTGCATC +
Preference number: 5 (lower is better)
Translates to: WAQTVPEAPDGSRSP*GLRAKIWPWPDSCI
Trigger: GATGCAGGAGTCAGGCCAGGGCCAGATTTTAGCTCTGAGCCCTCAAGGGCTCCTGGAGCCATCTGGAGCCTCTGGAACCGTCTGAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS CCA 90 bp TGGCTCCATCAGAGCAGGTGCATGGGCCTCAGTTCAGAAGAGAGTTaGGCTCAGACGGTTCCAGAGGCTCCAGATGGCTCCAGGAGCCCT +
Preference number: 5 (lower is better)
Translates to: WLHQSRCMGLSSEES*AQTVPEAPDGSRSP
Trigger: AGGGCTCCTGGAGCCATCTGGAGCCTCTGGAACCGTCTGAGCCCAACTCTCTTCTGAACTGAGGCCCATGCACCTGCTCTGATGGAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS TCA 90 bp CGGCCAGTGAGACCTCCAGCTCCCAGTACCAGTCATTTTAACAGCTaGGGCTCCGGGTGCTTTGCTCTGGTTCCTGCTGGCCTATGTGGA +
Preference number: 5 (lower is better)
Translates to: RPVRPPAPSTSHFNS*GSGCFALVPAGLCG
Trigger: TCCACATAGGCCAGCAGGAACCAGAGCAAAGCACCCGGAGCCTCAGCTGTTAAAATGACTGGTACTGGGAGCTGGAGGTCTCACTGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS CCA 90 bp AGAGGAAACTTGCAGTCAGGGCCTGGCTCCATCAGAGCAGGTGCATaGGCCTCAGTTCAGAAGAGAGTTGGGCTCAGACGGTTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: RGNLQSGPGSIRAGA*ASVQKRVGLRRFQR
Trigger: CCTCTGGAACCGTCTGAGCCCAACTCTCTTCTGAACTGAGGCCCATGCACCTGCTCTGATGGAGCCAGGCCCTGACTGCAAGTTTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS TCA 90 bp CTGCACTCATCAGATGCACCCTGGGTTCGACCCAGTCACGGCCAGTaGGACCTCCAGCTCCCAGTACCAGTCATTTTAACAGCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: LHSSDAPWVRPSHGQ*DLQLPVPVILTAEA
Trigger: AGCCTCAGCTGTTAAAATGACTGGTACTGGGAGCTGGAGGTCTCACTGGCCGTGACTGGGTCGAACCCAGGGTGCATCTGATGAGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS GCA 90 bp TCCTCTCCCTCAAAACCCACCTCACAAAGAGGGAGGCAGAGTCCATaGAGAGCTCTTGCTTCAGGAATGGTTGCAGCAGCTCCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: SSPSKPTSQRGRQSP*RALASGMVAAAPAF
Trigger: GAAGGCTGGAGCTGCTGCAACCATTCCTGAAGCAAGAGCTCTGCATGGACTCTGCCTCCCTCTTTGTGAGGTGGGTTTTGAGGGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS TCA 90 bp TCCCTGAGCTTCCTGGGACAGCTCACTCAGGGCTGGCCAGCTGTGTaGCCATTAGAAAGTGCTTCTTCTCTTCGAATTCAAAACTGCCTC +
Preference number: 5 (lower is better)
Translates to: SLSFLGQLTQGWPAV*PLESASSLRIQNCL
Trigger: GAGGCAGTTTTGAATTCGAAGAGAAGAAGCACTTTCTAATGGTCACACAGCTGGCCAGCCCTGAGTGAGCTGTCCCAGGAAGCTCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS TCA 90 bp TGTTCTCAGCATGTTCTTCTCAAATGGCATCTGATCCACATCCCCTaGGGTTGCACTTTGGCAGAGGAAACTTGCAGTCAGGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: CSQHVLLKWHLIHIP*GCTLAEETCSQGLA
Trigger: AGCCAGGCCCTGACTGCAAGTTTCCTCTGCCAAAGTGCAACCTCAGGGGATGTGGATCAGATGCCATTTGAGAAGAACATGCTGAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS GCA 90 bp GGGACAGCTCACTCAGGGCTGGCCAGCTGTGTGACCATTAGAAAGTaGTTCTTCTCTTCGAATTCAAAACTGCCTCTGGTGGATTCTACC +
Preference number: 5 (lower is better)
Translates to: GTAHSGLASCVTIRK*FFSSNSKLPLVDST
Trigger: GGTAGAATCCACCAGAGGCAGTTTTGAATTCGAAGAGAAGAAGCACTTTCTAATGGTCACACAGCTGGCCAGCCCTGAGTGAGCTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS TCA 90 bp CACCATGTTCTTAACAACACTTTGAACAGATGGCATCACCCCAGTTaGCAGATGAGGAATCCAAGACTGGAGCAGAGAAGGAGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: HHVLNNTLNRWHHPS*QMRNPRLEQRRRLP
Trigger: GGGCAGCCTCCTTCTCTGCTCCAGTCTTGGATTCCTCATCTGTCAACTGGGGTGATGCCATCTGTTCAAAGTGTTGTTAAGAACATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS TCA 90 bp GGTTGCAGCAGCTCCAGCCTTCACATCTCAGGCTCAATTCCAGAGTaGAAGATTCAGTGTCTTTGTCCTTCCATCTCCAGCAGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: GCSSSSLHISGSIPE*KIQCLCPSISSSFA
Trigger: AGCAAAACTGCTGGAGATGGAAGGACAAAGACACTGAATCTTTCACTCTGGAATTGAGCCTGAGATGTGAAGGCTGGAGCTGCTGCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS TCA 90 bp TGCCATCTCTCAGTTGTTCTCAGCATGTTCTTCTCAAATGGCATCTaGTCCACATCCCCTGAGGTTGCACTTTGGCAGAGGAAACTTGCA +
Preference number: 5 (lower is better)
Translates to: CHLSVVLSMFFSNGI*STSPEVALWQRKLA
Trigger: TGCAAGTTTCCTCTGCCAAAGTGCAACCTCAGGGGATGTGGATCAGATGCCATTTGAGAAGAACATGCTGAGAACAACTGAGAGATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS CCA 90 bp TTCTTCTCTTCGAATTCAAAACTGCCTCTGGTGGATTCTACCAAGTaGTTCTTCTTTTGCCCTCTGGAGCTACAGAGAGTTAGTCTAATC +
Preference number: 5 (lower is better)
Translates to: FFSSNSKLPLVDSTK*FFFCPLELQRVSLI
Trigger: GATTAGACTAACTCTCTGTAGCTCCAGAGGGCAAAAGAAGAACCACTTGGTAGAATCCACCAGAGGCAGTTTTGAATTCGAAGAGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS CAA 90 bp CTGGCTCCATCAGAGCAGGTGCATGGGCCTCAGTTCAGAAGAGAGTaGGGCTCAGACGGTTCCAGAGGCTCCAGATGGCTCCAGGAGCCC +
Preference number: 6 (lower is better)
Translates to: LAPSEQVHGPQFRRE*GSDGSRGSRWLQEP
Trigger: GGGCTCCTGGAGCCATCTGGAGCCTCTGGAACCGTCTGAGCCCAACTCTCTTCTGAACTGAGGCCCATGCACCTGCTCTGATGGAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS CCA 72 bp CAGAGCAGGTGCATGGGCCTCAGTTCAGAAGAGAGTTaGGCTCAGACGGTTCCAGAGGCTCCAGATGGCTCC +
Preference number: 6 (lower is better)
Translates to: QSRCMGLSSEES*AQTVPEAPDGS
Trigger: GGAGCCATCTGGAGCCTCTGGAACCGTCTGAGCCCAACTCTCTTCTGAACTGAGGCCCATGCACCTGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS CCA 72 bp AGAGAAGGAGGCTGCCCAAGGCCACATGCAGTCCCATaGCAGAAGACAGAGTTTCCAGCCCTAGGCAGACTC +
Preference number: 6 (lower is better)
Translates to: REGGCPRPHAVP*QKTEFPALGRL
Trigger: GAGTCTGCCTAGGGCTGGAAACTCTGTCTTCTGCCATGGGACTGCATGTGGCCTTGGGCAGCCTCCTTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS CAA 72 bp TCAGAGCAGGTGCATGGGCCTCAGTTCAGAAGAGAGTaGGGCTCAGACGGTTCCAGAGGCTCCAGATGGCTC +
Preference number: 6 (lower is better)
Translates to: SEQVHGPQFRRE*GSDGSRGSRWL
Trigger: GAGCCATCTGGAGCCTCTGGAACCGTCTGAGCCCAACTCTCTTCTGAACTGAGGCCCATGCACCTGCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS CAA 72 bp CCACATCCCCTGAGGTTGCACTTTGGCAGAGGAAACTaGCAGTCAGGGCCTGGCTCCATCAGAGCAGGTGCA +
Preference number: 6 (lower is better)
Translates to: PHPLRLHFGRGN*QSGPGSIRAGA
Trigger: TGCACCTGCTCTGATGGAGCCAGGCCCTGACTGCAAGTTTCCTCTGCCAAAGTGCAACCTCAGGGGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS TCA 72 bp AGACCTCCAGCTCCCAGTACCAGTCATTTTAACAGCTaGGGCTCCGGGTGCTTTGCTCTGGTTCCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: RPPAPSTSHFNS*GSGCFALVPAG
Trigger: GCCAGCAGGAACCAGAGCAAAGCACCCGGAGCCTCAGCTGTTAAAATGACTGGTACTGGGAGCTGGAGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS GCA 72 bp GAGTTTCCAGCCCTAGGCAGACTCATCCACCCACCCTaGTCTCTCCCCGAGCTGAAAAATGCTGCCATCTCT +
Preference number: 6 (lower is better)
Translates to: EFPALGRLIHPP*SLPELKNAAIS
Trigger: AGAGATGGCAGCATTTTTCAGCTCGGGGAGAGAGCAGGGTGGGTGGATGAGTCTGCCTAGGGCTGGAAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS TCA 72 bp TCAGATGCACCCTGGGTTCGACCCAGTCACGGCCAGTaGGACCTCCAGCTCCCAGTACCAGTCATTTTAACA +
Preference number: 6 (lower is better)
Translates to: SDAPWVRPSHGQ*DLQLPVPVILT
Trigger: TGTTAAAATGACTGGTACTGGGAGCTGGAGGTCTCACTGGCCGTGACTGGGTCGAACCCAGGGTGCATCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS GCA 72 bp CTGAACCAAAAGATTCTGGGTCACCTGAGTCTACCATaGCTGCACTCATCAGATGCACCCTGGGTTCGACCC +
Preference number: 6 (lower is better)
Translates to: LNQKILGHLSLP*LHSSDAPWVRP
Trigger: GGGTCGAACCCAGGGTGCATCTGATGAGTGCAGGCATGGTAGACTCAGGTGACCCAGAATCTTTTGGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS CAA 90 bp TCAGCATGTTCTTCTCAAATGGCATCTGATCCACATCCCCTGAGGTaGCACTTTGGCAGAGGAAACTTGCAGTCAGGGCCTGGCTCCATC +
Preference number: 6 (lower is better)
Translates to: SACSSQMASDPHPLR*HFGRGNLQSGPGSI
Trigger: GATGGAGCCAGGCCCTGACTGCAAGTTTCCTCTGCCAAAGTGCAACCTCAGGGGATGTGGATCAGATGCCATTTGAGAAGAACATGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS CAA 90 bp CCACCCTGCTCTCTCCCCGAGCTGAAAAATGCTGCCATCTCTCAGTaGTTCTCAGCATGTTCTTCTCAAATGGCATCTGATCCACATCCC +
Preference number: 6 (lower is better)
Translates to: PPCSLPELKNAAISQ*FSACSSQMASDPHP
Trigger: GGGATGTGGATCAGATGCCATTTGAGAAGAACATGCTGAGAACAACTGAGAGATGGCAGCATTTTTCAGCTCGGGGAGAGAGCAGGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS CAA 72 bp CACAGCCTTGCCCACTTTCCTGGGTTGGTGCTGGGATaGAAAGAGGTAATGGATAGAAGACGATGTCCAGGT +
Preference number: 6 (lower is better)
Translates to: HSLAHFPGLVLG*KEVMDRRRCPG
Trigger: ACCTGGACATCGTCTTCTATCCATTACCTCTTTCAATCCCAGCACCAACCCAGGAAAGTGGGCAAGGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS CAA 72 bp TCTTCTCAAATGGCATCTGATCCACATCCCCTGAGGTaGCACTTTGGCAGAGGAAACTTGCAGTCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: SSQMASDPHPLR*HFGRGNLQSGP
Trigger: AGGCCCTGACTGCAAGTTTCCTCTGCCAAAGTGCAACCTCAGGGGATGTGGATCAGATGCCATTTGAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS GCA 72 bp CACTCAGGGCTGGCCAGCTGTGTGACCATTAGAAAGTaGTTCTTCTCTTCGAATTCAAAACTGCCTCTGGTG +
Preference number: 6 (lower is better)
Translates to: HSGLASCVTIRK*FFSSNSKLPLV
Trigger: CACCAGAGGCAGTTTTGAATTCGAAGAGAAGAAGCACTTTCTAATGGTCACACAGCTGGCCAGCCCTGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS CAA 72 bp TTGTCCTTCCATCTCCAGCAGTTTTGCTGCATCTCATaGGCTCTTACTGGGCTATGTGACCTCCCTGAACCA +
Preference number: 6 (lower is better)
Translates to: LSFHLQQFCCIS*ALTGLCDLPEP
Trigger: TGGTTCAGGGAGGTCACATAGCCCAGTAAGAGCCAATGAGATGCAGCAAAACTGCTGGAGATGGAAGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS TCA 72 bp AGCTCCAGCCTTCACATCTCAGGCTCAATTCCAGAGTaGAAGATTCAGTGTCTTTGTCCTTCCATCTCCAGC +
Preference number: 6 (lower is better)
Translates to: SSSLHISGSIPE*KIQCLCPSISS
Trigger: GCTGGAGATGGAAGGACAAAGACACTGAATCTTTCACTCTGGAATTGAGCCTGAGATGTGAAGGCTGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS TCA 72 bp CATGTTCTTCTCAAATGGCATCTGATCCACATCCCCTaGGGTTGCACTTTGGCAGAGGAAACTTGCAGTCAG +
Preference number: 6 (lower is better)
Translates to: HVLLKWHLIHIP*GCTLAEETCSQ
Trigger: CTGACTGCAAGTTTCCTCTGCCAAAGTGCAACCTCAGGGGATGTGGATCAGATGCCATTTGAGAAGAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS GCA 72 bp TCAGTGTCTTTGTCCTTCCATCTCCAGCAGTTTTGCTaGATCTCATTGGCTCTTACTGGGCTATGTGACCTC +
Preference number: 6 (lower is better)
Translates to: SVSLSFHLQQFC*ISLALTGLCDL
Trigger: GAGGTCACATAGCCCAGTAAGAGCCAATGAGATGCAGCAAAACTGCTGGAGATGGAAGGACAAAGACACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS CAA 90 bp TCAGTGTCTTTGTCCTTCCATCTCCAGCAGTTTTGCTGCATCTCATaGGCTCTTACTGGGCTATGTGACCTCCCTGAACCAAAAGATTCT +
Preference number: 6 (lower is better)
Translates to: SVSLSFHLQQFCCIS*ALTGLCDLPEPKDS
Trigger: AGAATCTTTTGGTTCAGGGAGGTCACATAGCCCAGTAAGAGCCAATGAGATGCAGCAAAACTGCTGGAGATGGAAGGACAAAGACACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS TCA 72 bp CTTAACAACACTTTGAACAGATGGCATCACCCCAGTTaGCAGATGAGGAATCCAAGACTGGAGCAGAGAAGG +
Preference number: 6 (lower is better)
Translates to: LNNTLNRWHHPS*QMRNPRLEQRR
Trigger: CCTTCTCTGCTCCAGTCTTGGATTCCTCATCTGTCAACTGGGGTGATGCCATCTGTTCAAAGTGTTGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS GCA 72 bp CTGCCTCTGGTGGATTCTACCAAGTGGTTCTTCTTTTaGCCTCTGGAGCTACAGAGAGTTAGTCTAATCTCT +
Preference number: 6 (lower is better)
Translates to: LPLVDSTKWFFF*PLELQRVSLIS
Trigger: AGAGATTAGACTAACTCTCTGTAGCTCCAGAGGGCAAAAGAAGAACCACTTGGTAGAATCCACCAGAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS CCA 72 bp TCGAATTCAAAACTGCCTCTGGTGGATTCTACCAAGTaGTTCTTCTTTTGCCCTCTGGAGCTACAGAGAGTT +
Preference number: 6 (lower is better)
Translates to: SNSKLPLVDSTK*FFFCPLELQRV
Trigger: AACTCTCTGTAGCTCCAGAGGGCAAAAGAAGAACCACTTGGTAGAATCCACCAGAGGCAGTTTTGAATTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS CAA 72 bp CTCAGGCTCAATTCCAGAGTGAAAGATTCAGTGTCTTaGTCCTTCCATCTCCAGCAGTTTTGCTGCATCTCA +
Preference number: 6 (lower is better)
Translates to: LRLNSRVKDSVS*SFHLQQFCCIS
Trigger: TGAGATGCAGCAAAACTGCTGGAGATGGAAGGACAAAGACACTGAATCTTTCACTCTGGAATTGAGCCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS CAA 72 bp TCTCTCCCCGAGCTGAAAAATGCTGCCATCTCTCAGTaGTTCTCAGCATGTTCTTCTCAAATGGCATCTGAT +
Preference number: 6 (lower is better)
Translates to: SLPELKNAAISQ*FSACSSQMASD
Trigger: ATCAGATGCCATTTGAGAAGAACATGCTGAGAACAACTGAGAGATGGCAGCATTTTTCAGCTCGGGGAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS CCA 72 bp GAAAGTGCTTCTTCTCTTCGAATTCAAAACTGCCTCTaGTGGATTCTACCAAGTGGTTCTTCTTTTGCCCTC +
Preference number: 6 (lower is better)
Translates to: ESASSLRIQNCL*WILPSGSSFAL
Trigger: GAGGGCAAAAGAAGAACCACTTGGTAGAATCCACCAGAGGCAGTTTTGAATTCGAAGAGAAGAAGCACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445180.2
CDS GCA 72 bp CCATTAGAAAGTGCTTCTTCTCTTCGAATTCAAAACTaGCTCTGGTGGATTCTACCAAGTGGTTCTTCTTTT +
Preference number: 6 (lower is better)
Translates to: PLESASSLRIQN*LWWILPSGSSF
Trigger: AAAAGAAGAACCACTTGGTAGAATCCACCAGAGGCAGTTTTGAATTCGAAGAGAAGAAGCACTTTCTAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445180.2