Pregenerated sensors for LINC01647 (Homo sapiens)

Ensembl gene IDs: ENSG00000235643

Ensembl transcript IDs: ENST00000453135.2

Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GGGAGAAGCTGGTGGAGTGTCTCCGATGCTTCCTCTGAGGCAGGTTaGGGCAGGCCGGGCTGTGACAACAACTGTGTCCGCAACTGGTGG	+
Preference number: 5 (lower is better) Translates to: GRSWWSVSDASSEAG*GRPGCDNNCVRNWW Trigger: CCACCAGTTGCGGACACAGTTGTTGTCACAGCCCGGCCTGCCCCAACCTGCCTCAGAGGAAGCATCGGAGACACTCCACCAGCTTCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS CCA 90 bp	CAGATGCTGCCTTGGCCCCAGGATGAGGGAAGCCATGGGAGAAGCTaGTGGAGTGTCTCCGATGCTTCCTCTGAGGCAGGTTGGGGCAGG	+
Preference number: 5 (lower is better) Translates to: QMLPWPQDEGSHGRS*WSVSDASSEAGWGR Trigger: CCTGCCCCAACCTGCCTCAGAGGAAGCATCGGAGACACTCCACCAGCTTCTCCCATGGCTTCCCTCATCCTGGGGCCAAGGCAGCATCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS CCA 90 bp	TTAAGGCAGCACGTCTGGAGTTGTTCGTTCCTCCCGGTGGGCTCGTaGTCTCGCTGGCTCAGGAGTGAACCTGCAGACCTTCGTGGTGAG	+
Preference number: 5 (lower is better) Translates to: LRQHVWSCSFLPVGS*SRWLRSEPADLRGE Trigger: CTCACCACGAAGGTCTGCAGGTTCACTCCTGAGCCAGCGAGACCACGAGCCCACCGGGAGGAACGAACAACTCCAGACGTGCTGCCTTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS CCA 90 bp	GCAGGGCCTGACCAGTACAGGCCCCCTTTAGCCATTGTCTCCCTTTaGCATGAGGCAGAACAGATGTGCGCAGGGAGAGGACAGCAGCTG	+
Preference number: 5 (lower is better) Translates to: AGPDQYRPPLAIVSL*HEAEQMCAGRGQQL Trigger: CAGCTGCTGTCCTCTCCCTGCGCACATCTGTTCTGCCTCATGCCAAAGGGAGACAATGGCTAAAGGGGGCCTGTACTGGTCAGGCCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS CCA 90 bp	TCCTGTGAAGCCATTAGCTGGGTTGATGTGAGCTGGAGCTGTCTGTaGCCTCACCCCGCCCCTGCCACATGGAAGAAGCCTGAGTTGCTC	+
Preference number: 5 (lower is better) Translates to: SCEAISWVDVSWSCL*PHPAPATWKKPELL Trigger: GAGCAACTCAGGCTTCTTCCATGTGGCAGGGGCGGGGTGAGGCCACAGACAGCTCCAGCTCACATCAACCCAGCTAATGGCTTCACAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS CCA 90 bp	GGTTGGGGCAGGCCGGGCTGTGACAACAACTGTGTCCGCAACTGGTaGGTTTTTGGTCTCACTGACTTCAAGAATGAAGCCGCGGACCCT	+
Preference number: 5 (lower is better) Translates to: GWGRPGCDNNCVRNW*VFGLTDFKNEAADP Trigger: AGGGTCCGCGGCTTCATTCTTGAAGTCAGTGAGACCAAAAACCCACCAGTTGCGGACACAGTTGTTGTCACAGCCCGGCCTGCCCCAACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS CCA 90 bp	TGCTTCCCTCTTTCCTGTGAAGCCATTAGCTGGGTTGATGTGAGCTaGAGCTGTCTGTGGCCTCACCCCGCCCCTGCCACATGGAAGAAG	+
Preference number: 5 (lower is better) Translates to: CFPLSCEAISWVDVS*SCLWPHPAPATWKK Trigger: CTTCTTCCATGTGGCAGGGGCGGGGTGAGGCCACAGACAGCTCCAGCTCACATCAACCCAGCTAATGGCTTCACAGGAAAGAGGGAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS TCA 90 bp	GCAGCTGTTCTCCAGTTCCCTCAGCTTTTCCATTGCCCACAGCCATaGGATCCAGGCCGGGCCAATCAGACTTCTCTGGGATTTTGCTTC	+
Preference number: 5 (lower is better) Translates to: AAVLQFPQLFHCPQP*DPGRANQTSLGFCF Trigger: GAAGCAAAATCCCAGAGAAGTCTGATTGGCCCGGCCTGGATCTCATGGCTGTGGGCAATGGAAAAGCTGAGGGAACTGGAGAACAGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS CCA 90 bp	CTCACAATCACGGTGGAAGGCAAAGGAGCAAAGGCACGTCTTCCATaGCAGCAGGCAAGAGGGAGCTTGGGCAGGGAACTCCCTTTTATA	+
Preference number: 5 (lower is better) Translates to: LTITVEGKGAKARLP*QQARGSLGRELPFI Trigger: TATAAAAGGGAGTTCCCTGCCCAAGCTCCCTCTTGCCTGCTGCCATGGAAGACGTGCCTTTGCTCCTTTGCCTTCCACCGTGATTGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS CCA 90 bp	AGCAAGATTTATTACAAAGAGCAAAAGAACAAAGCTTCCACAGTGTaGAAGGGGACCCGAGCGGGTTGCCACTGCTGGCTCGGGCAGCCT	+
Preference number: 5 (lower is better) Translates to: SKIYYKEQKNKASTV*KGTRAGCHCWLGQP Trigger: AGGCTGCCCGAGCCAGCAGTGGCAACCCGCTCGGGTCCCCTTCCACACTGTGGAAGCTTTGTTCTTTTGCTCTTTGTAATAAATCTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS CCA 72 bp	TGGTGGAGTGTCTCCGATGCTTCCTCTGAGGCAGGTTaGGGCAGGCCGGGCTGTGACAACAACTGTGTCCGC	+
Preference number: 6 (lower is better) Translates to: WWSVSDASSEAG*GRPGCDNNCVR Trigger: GCGGACACAGTTGTTGTCACAGCCCGGCCTGCCCCAACCTGCCTCAGAGGAAGCATCGGAGACACTCCACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS CCA 72 bp	GCCATTAGCTGGGTTGATGTGAGCTGGAGCTGTCTGTaGCCTCACCCCGCCCCTGCCACATGGAAGAAGCCT	+
Preference number: 6 (lower is better) Translates to: AISWVDVSWSCL*PHPAPATWKKP Trigger: AGGCTTCTTCCATGTGGCAGGGGCGGGGTGAGGCCACAGACAGCTCCAGCTCACATCAACCCAGCTAATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS CAA 90 bp	ACCTTCACGGTGAGTGTTACAGCTCTTAAGGCAGCACGTCTGGAGTaGTTCGTTCCTCCCGGTGGGCTCGTGGTCTCGCTGGCTCAGGAG	+
Preference number: 6 (lower is better) Translates to: TFTVSVTALKAARLE*FVPPGGLVVSLAQE Trigger: CTCCTGAGCCAGCGAGACCACGAGCCCACCGGGAGGAACGAACAACTCCAGACGTGCTGCCTTAAGAGCTGTAACACTCACCGTGAAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS GCA 72 bp	TCCACAGTGTGGAAGGGGACCCGAGCGGGTTGCCACTaGTGGCTCGGGCAGCCTGCTTTTATTCTCTTATCT	+
Preference number: 6 (lower is better) Translates to: STVWKGTRAGCH*WLGQPAFILLS Trigger: AGATAAGAGAATAAAAGCAGGCTGCCCGAGCCAGCAGTGGCAACCCGCTCGGGTCCCCTTCCACACTGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS GCA 72 bp	AAGGATATCTCTCCCCTGCCTCAGCTCTGTACCAGATaGTGCCTTGGCCCCAGGATGAGGGAAGCCATGGGA	+
Preference number: 6 (lower is better) Translates to: KDISPLPQLCTR*CLGPRMREAMG Trigger: TCCCATGGCTTCCCTCATCCTGGGGCCAAGGCAGCATCTGGTACAGAGCTGAGGCAGGGGAGAGATATCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS CCA 72 bp	CGGAGTTTCTTCCTTCTGGTGGGTTCGTGGCCTCGCTaGTTCAGGAGTGAAGCTGCAGACCTTCACGGTGAG	+
Preference number: 6 (lower is better) Translates to: RSFFLLVGSWPR*FRSEAADLHGE Trigger: CTCACCGTGAAGGTCTGCAGCTTCACTCCTGAACCAGCGAGGCCACGAACCCACCAGAAGGAAGAAACTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS CAA 90 bp	CAGGGAGAGGACAGCAGCTGTTCTCCAGTTCCCTCAGCTTTTCCATaGCCCACAGCCATGAGATCCAGGCCGGGCCAATCAGACTTCTCT	+
Preference number: 6 (lower is better) Translates to: QGEDSSCSPVPSAFP*PTAMRSRPGQSDFS Trigger: AGAGAAGTCTGATTGGCCCGGCCTGGATCTCATGGCTGTGGGCAATGGAAAAGCTGAGGGAACTGGAGAACAGCTGCTGTCCTCTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS TCA 72 bp	GTACAGGCCCCCTTTAGCCATTGTCTCCCTTTGGCATaGGGCAGAACAGATGTGCGCAGGGAGAGGACAGCA	+
Preference number: 6 (lower is better) Translates to: VQAPFSHCLPLA*GRTDVRRERTA Trigger: TGCTGTCCTCTCCCTGCGCACATCTGTTCTGCCTCATGCCAAAGGGAGACAATGGCTAAAGGGGGCCTGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS CCA 72 bp	AGATGTGTTCGGAGTTTCTTCCTTCTGGTGGGTTCGTaGCCTCGCTGGTTCAGGAGTGAAGCTGCAGACCTT	+
Preference number: 6 (lower is better) Translates to: RCVRSFFLLVGS*PRWFRSEAADL Trigger: AAGGTCTGCAGCTTCACTCCTGAACCAGCGAGGCCACGAACCCACCAGAAGGAAGAAACTCCGAACACATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS CCA 72 bp	TATTACAAAGAGCAAAAGAACAAAGCTTCCACAGTGTaGAAGGGGACCCGAGCGGGTTGCCACTGCTGGCTC	+
Preference number: 6 (lower is better) Translates to: YYKEQKNKASTV*KGTRAGCHCWL Trigger: GAGCCAGCAGTGGCAACCCGCTCGGGTCCCCTTCCACACTGTGGAAGCTTTGTTCTTTTGCTCTTTGTAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS CCA 72 bp	GGCAGGCCGGGCTGTGACAACAACTGTGTCCGCAACTaGTGGGTTTTTGGTCTCACTGACTTCAAGAATGAA	+
Preference number: 6 (lower is better) Translates to: GRPGCDNNCVRN*WVFGLTDFKNE Trigger: TTCATTCTTGAAGTCAGTGAGACCAAAAACCCACCAGTTGCGGACACAGTTGTTGTCACAGCCCGGCCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS CAA 72 bp	GCTGTGACAACAACTGTGTCCGCAACTGGTGGGTTTTaGGTCTCACTGACTTCAAGAATGAAGCCGCGGACC	+
Preference number: 6 (lower is better) Translates to: AVTTTVSATGGF*VSLTSRMKPRT Trigger: GGTCCGCGGCTTCATTCTTGAAGTCAGTGAGACCAAAAACCCACCAGTTGCGGACACAGTTGTTGTCACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS CCA 72 bp	GGAATTACAGGAGCTACAATTCAAGATGAGATTTGGTaGGGGGACACAGCCAAACCGTATCACCCACCCTGC	+
Preference number: 6 (lower is better) Translates to: GITGATIQDEIW*GDTAKPYHPPC Trigger: GCAGGGTGGGTGATACGGTTTGGCTGTGTCCCCCCACCAAATCTCATCTTGAATTGTAGCTCCTGTAATTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS CCA 72 bp	AAAAAGAGGTTTAATGGACTGACAGTTCCACGAGGCTaGGGAGGCCTCACAATCACGGTGGAAGGCAAAGGA	+
Preference number: 6 (lower is better) Translates to: KKRFNGLTVPRG*GGLTITVEGKG Trigger: TCCTTTGCCTTCCACCGTGATTGTGAGGCCTCCCCAGCCTCGTGGAACTGTCAGTCCATTAAACCTCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS GCA 72 bp	CTCTCCCCACTCTCTGTCTCCCTACCTACCTATACATaGATACACAACCTGTGTGTTCTGTTTCTCTGCAGG	+
Preference number: 6 (lower is better) Translates to: LSPLSVSLPTYT*IHNLCVLFLCR Trigger: CCTGCAGAGAAACAGAACACACAGGTTGTGTATGCATGTATAGGTAGGTAGGGAGACAGAGAGTGGGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS TCA 72 bp	CTGCAAATTTTGGACTTGCCAGCCTCTGTAATCACATaGGCCAATTTCTCGAACCTCTCTCTCTCCCCACTC	+
Preference number: 6 (lower is better) Translates to: LQILDLPASVIT*ANFSNLSLSPL Trigger: GAGTGGGGAGAGAGAGAGGTTCGAGAAATTGGCTCATGTGATTACAGAGGCTGGCAAGTCCAAAATTTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453135.2
CDS TCA 72 bp	CCCATGAGTCAATTACCTCCCATGGGGTCCCTCCCATaGCATGTGGGAATTACAGGAGCTACAATTCAAGAT	+
Preference number: 6 (lower is better) Translates to: PMSQLPPMGSLP*HVGITGATIQD Trigger: ATCTTGAATTGTAGCTCCTGTAATTCCCACATGTCATGGGAGGGACCCCATGGGAGGTAATTGACTCATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453135.2