Pregenerated sensors for LINC01646 (Homo sapiens)
Ensembl gene IDs: ENSG00000232596Ensembl transcript IDs: ENST00000420522.1, ENST00000634256.1, ENST00000635556.1, ENST00000659059.1, ENST00000659083.1, ENST00000661628.1, ENST00000666685.1, ENST00000667354.1
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGCTGGACGTGTCAGCGTGAGCCGGCCTGCCCCACCCTACATGTATaGATGGATTCTGGGCCTTGGGGTGAGCGCGGGAGAACCACTGAG | + |
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Preference number: 5 (lower is better) Translates to: GWTCQREPACPTLHV*MDSGPWGERGRTTE Trigger: CTCAGTGGTTCTCCCGCGCTCACCCCAAGGCCCAGAATCCATGCATACATGTAGGGTGGGGCAGGCCGGCTCACGCTGACACGTCCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000634256.1 ENST00000659059.1 ENST00000659083.1 ENST00000666685.1 |
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| CDS GCA 90 bp | GCAGAGGAGCTGGGCAGAGGCTGGACGTGTCAGCGTGAGCCGGCCTaGCCCACCCTACATGTATGCATGGATTCTGGGCCTTGGGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: AEELGRGWTCQREPA*PTLHVCMDSGPWGE Trigger: CTCACCCCAAGGCCCAGAATCCATGCATACATGTAGGGTGGGGCAGGCCGGCTCACGCTGACACGTCCAGCCTCTGCCCAGCTCCTCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000634256.1 ENST00000659059.1 ENST00000659083.1 ENST00000666685.1 |
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| CDS CCA 90 bp | GGACGTGTCAGCGTGAGCCGGCCTGCCCCACCCTACATGTATGCATaGATTCTGGGCCTTGGGGTGAGCGCGGGAGAACCACTGAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: GRVSVSRPAPPYMYA*ILGLGVSAGEPLSL Trigger: CAGGCTCAGTGGTTCTCCCGCGCTCACCCCAAGGCCCAGAATCCATGCATACATGTAGGGTGGGGCAGGCCGGCTCACGCTGACACGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000634256.1 ENST00000659059.1 ENST00000659083.1 ENST00000666685.1 |
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| CDS CCA 90 bp | GAGCCGGCCTGCCCCACCCTACATGTATGCATGGATTCTGGGCCTTaGGGTGAGCGCGGGAGAACCACTGAGCCTGTTTGCAAAGGATGG | + |
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Preference number: 5 (lower is better) Translates to: EPACPTLHVCMDSGP*GERGRTTEPVCKGW Trigger: CCATCCTTTGCAAACAGGCTCAGTGGTTCTCCCGCGCTCACCCCAAGGCCCAGAATCCATGCATACATGTAGGGTGGGGCAGGCCGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000634256.1 ENST00000659059.1 ENST00000659083.1 ENST00000666685.1 |
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| CDS GCA 90 bp | GCATCTGCACTCAGCCACCAACTAGGAGACCCAGTGCCCATCTCCTaGCAGAACTGCTGCTTTGGGCGGTCTTCTCATTTGCTTCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: ASALSHQLGDPVPIS*QNCCFGRSSHLLLL Trigger: GAGGAGAAGCAAATGAGAAGACCGCCCAAAGCAGCAGTTCTGGCAGGAGATGGGCACTGGGTCTCCTAGTTGGTGGCTGAGTGCAGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635556.1 |
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| CDS CCA 90 bp | GGTGTCATCAGATCCTTGAGCAAGAAGAGACCTCAGGAAAACATCTaGCGCAGGCTCCTGCATAAGCCAGTGGGTGCCCTGGCTAGACGC | + |
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Preference number: 5 (lower is better) Translates to: GVIRSLSKKRPQENI*RRLLHKPVGALARR Trigger: GCGTCTAGCCAGGGCACCCACTGGCTTATGCAGGAGCCTGCGCCAGATGTTTTCCTGAGGTCTCTTCTTGCTCAAGGATCTGATGACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS TCA 90 bp | TCAGCAATAACGTCCTCACTGGAGCCAAGAACCTCAGAATCCAGATaGTGGGTTGAGGCTGGGAAGGTGTGCTGGAGAGCTGGGTTGGGC | + |
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Preference number: 5 (lower is better) Translates to: SAITSSLEPRTSESR*WVEAGKVCWRAGLG Trigger: GCCCAACCCAGCTCTCCAGCACACCTTCCCAGCCTCAACCCATCATCTGGATTCTGAGGTTCTTGGCTCCAGTGAGGACGTTATTGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420522.1 ENST00000635556.1 |
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| CDS GCA 90 bp | AAGGCTTGGGCTGGGGAGATGATCCTGGACCTTCTGGATGGGCCATaGATGCATCACGAGTGTCCTCCTTCCCAGAATTCCTCTTACTCC | + |
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Preference number: 5 (lower is better) Translates to: KAWAGEMILDLLDGP*MHHECPPSQNSSYS Trigger: GGAGTAAGAGGAATTCTGGGAAGGAGGACACTCGTGATGCATGCATGGCCCATCCAGAAGGTCCAGGATCATCTCCCCAGCCCAAGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000634256.1 ENST00000659059.1 ENST00000659083.1 ENST00000666685.1 ENST00000667354.1 |
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| CDS CCA 90 bp | AAAGCCTTAGCACAAGGGGCCCTAGGAGTGAGTCGAGGAACCTGCTaGTACCTCTCCGAAGTGTTCCCATCTAGGATTTCAGATGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: KALAQGALGVSRGTC*YLSEVFPSRISDAA Trigger: GGCTGCATCTGAAATCCTAGATGGGAACACTTCGGAGAGGTACCAGCAGGTTCCTCGACTCACTCCTAGGGCCCCTTGTGCTAAGGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS CCA 90 bp | TTATCAGAATGGATGGGGGATCAACAGTGGGTCCCCCAGTGGCTGTaGTCAGCTGAACAGAGGTGTCTGTGTCCTAATTCCCAGAACCTG | + |
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Preference number: 5 (lower is better) Translates to: LSEWMGDQQWVPQWL*SAEQRCLCPNSQNL Trigger: CAGGTTCTGGGAATTAGGACACAGACACCTCTGTTCAGCTGACCACAGCCACTGGGGGACCCACTGTTGATCCCCCATCCATTCTGATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000634256.1 ENST00000659059.1 ENST00000659083.1 ENST00000666685.1 ENST00000667354.1 |
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| CDS GCA 90 bp | AGAAAAGCCTTAGCACAAGGGGCCCTAGGAGTGAGTCGAGGAACCTaGTGGTACCTCTCCGAAGTGTTCCCATCTAGGATTTCAGATGCA | + |
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Preference number: 5 (lower is better) Translates to: RKALAQGALGVSRGT*WYLSEVFPSRISDA Trigger: TGCATCTGAAATCCTAGATGGGAACACTTCGGAGAGGTACCAGCAGGTTCCTCGACTCACTCCTAGGGCCCCTTGTGCTAAGGCTTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS GCA 90 bp | ATAAGCCAGTGGGTGCCCTGGCTAGACGCAACGGAACAGATGATTTaGATTCTCTTACTGAAGGTCCCCAGGGACAAGATGCCACATCTC | + |
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Preference number: 5 (lower is better) Translates to: ISQWVPWLDATEQMI*ILLLKVPRDKMPHL Trigger: GAGATGTGGCATCTTGTCCCTGGGGACCTTCAGTAAGAGAATGCAAATCATCTGTTCCGTTGCGTCTAGCCAGGGCACCCACTGGCTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS CCA 90 bp | GGCCTCAAAGTGGCAGTCACCTCTAGTCCCCAGGATGAGAGGAAATaGCTCAGACCTGTTAACTGGGTGGCTTTTCTACAACGGCTGAAT | + |
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Preference number: 5 (lower is better) Translates to: GLKVAVTSSPQDERK*LRPVNWVAFLQRLN Trigger: ATTCAGCCGTTGTAGAAAAGCCACCCAGTTAACAGGTCTGAGCCATTTCCTCTCATCCTGGGGACTAGAGGTGACTGCCACTTTGAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000634256.1 ENST00000659059.1 ENST00000659083.1 ENST00000666685.1 |
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| CDS CCA 90 bp | CCAACTAGGAGACCCAGTGCCCATCTCCTGCCAGAACTGCTGCTTTaGGCGGTCTTCTCATTTGCTTCTCCTCATTATTTCTCCATGTGG | + |
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Preference number: 5 (lower is better) Translates to: PTRRPSAHLLPELLL*AVFSFASPHYFSMW Trigger: CCACATGGAGAAATAATGAGGAGAAGCAAATGAGAAGACCGCCCAAAGCAGCAGTTCTGGCAGGAGATGGGCACTGGGTCTCCTAGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635556.1 |
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| CDS TCA 90 bp | GCCACAGAAAGCAGAAATCTGTTCACTCCATCATCAGGCATTGACTaGGCAGCAGGCACTGTTCCTCAGAATCCAGATGATGGGTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: ATESRNLFTPSSGID*AAGTVPQNPDDGLR Trigger: CCTCAACCCATCATCTGGATTCTGAGGAACAGTGCCTGCTGCTCAGTCAATGCCTGATGATGGAGTGAACAGATTTCTGCTTTCTGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659059.1 ENST00000667354.1 |
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| CDS GCA 90 bp | TTGGAATTCATTCTCAGAAGTGTGTGTCCACCCACTTCCCAGCAGTaGAGGGTTTCCAGGAAGGGCCAAGAACTCTTAACTGGCCTCAAA | + |
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Preference number: 5 (lower is better) Translates to: LEFILRSVCPPTSQQ*RVSRKGQELLTGLK Trigger: TTTGAGGCCAGTTAAGAGTTCTTGGCCCTTCCTGGAAACCCTGCACTGCTGGGAAGTGGGTGGACACACACTTCTGAGAATGAATTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000634256.1 ENST00000659059.1 ENST00000659083.1 ENST00000666685.1 |
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| CDS CCA 90 bp | GAGCAGACCACTGGAGCCTGGTTTGAGGATGGAAGGACCCTGACTTaGACTCTGTTTTGGTTGCTTTTACTCTGGTTTACTCCAAAGCTC | + |
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Preference number: 5 (lower is better) Translates to: EQTTGAWFEDGRTLT*TLFWLLLLWFTPKL Trigger: GAGCTTTGGAGTAAACCAGAGTAAAAGCAACCAAAACAGAGTCCAAGTCAGGGTCCTTCCATCCTCAAACCAGGCTCCAGTGGTCTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635556.1 |
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| CDS CCA 90 bp | AATGCAAATCTAATCACGCCTGAGCTAGAGCAGACCACTGGAGCCTaGTTTGAGGATGGAAGGACCCTGACTTGGACTCTGTTTTGGTTG | + |
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Preference number: 5 (lower is better) Translates to: NANLITPELEQTTGA*FEDGRTLTWTLFWL Trigger: CAACCAAAACAGAGTCCAAGTCAGGGTCCTTCCATCCTCAAACCAGGCTCCAGTGGTCTGCTCTAGCTCAGGCGTGATTAGATTTGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635556.1 |
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| CDS TCA 90 bp | GGAAATGGCTCAGACCTGTTAACTGGGTGGCTTTTCTACAACGGCTaGATTAGTGAAGGAATGACCAAGCTCTGCCAAATTCCCTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: GNGSDLLTGWLFYNG*ISEGMTKLCQIPCR Trigger: TCTGCAGGGAATTTGGCAGAGCTTGGTCATTCCTTCACTAATTCAGCCGTTGTAGAAAAGCCACCCAGTTAACAGGTCTGAGCCATTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000634256.1 ENST00000659059.1 ENST00000659083.1 ENST00000666685.1 |
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| CDS GCA 90 bp | TTAAATAGAACAAAAGATTTAGCTCCTCCGAGCAGGAGGGAAGTTTaGTGGCAGAGGGTCTTTGGACTTGAACTGCAACATCGTCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: LNRTKDLAPPSRREV*WQRVFGLELQHRRL Trigger: GAGCCGACGATGTTGCAGTTCAAGTCCAAAGACCCTCTGCCAGCAAACTTCCCTCCTGCTCGGAGGAGCTAAATCTTTTGTTCTATTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS TCA 90 bp | GCCACAGAAAGCAGAAATCTGTTCACTCCATCATCAGGCATTGACTaGGCAGCAGGCACTGTTTTTGTCTTACTTCCTCCTTGGAACACA | + |
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Preference number: 5 (lower is better) Translates to: ATESRNLFTPSSGID*AAGTVFVLLPPWNT Trigger: TGTGTTCCAAGGAGGAAGTAAGACAAAAACAGTGCCTGCTGCTCAGTCAATGCCTGATGATGGAGTGAACAGATTTCTGCTTTCTGTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659083.1 |
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| CDS GCA 90 bp | GCCAGACTCCTCCATCAGATTTTGGACTTGCCAAATCTTCACCATTaGCTGAGCCAATTCCTTAGGGATGTGGATATGTTCTGTCATCTG | + |
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Preference number: 5 (lower is better) Translates to: ARLLHQILDLPNLHH*LSQFLRDVDMFCHL Trigger: CAGATGACAGAACATATCCACATCCCTAAGGAATTGGCTCAGGCAATGGTGAAGATTTGGCAAGTCCAAAATCTGATGGAGGAGTCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS TCA 90 bp | GCCACAGAAAGCAGAAATCTGTTCACTCCATCATCAGGCATTGACTaGGCAGCAGGCACTGTTCTTTCACTCAGTATTTCCCAACCTTTT | + |
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Preference number: 5 (lower is better) Translates to: ATESRNLFTPSSGID*AAGTVLSLSISQPF Trigger: AAAAGGTTGGGAAATACTGAGTGAAAGAACAGTGCCTGCTGCTCAGTCAATGCCTGATGATGGAGTGAACAGATTTCTGCTTTCTGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000634256.1 ENST00000666685.1 |
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| CDS CCA 90 bp | CTCCTGCTTGCAGGAATTAATAGCTTTCAGGGAATATTGTTTGGGTaGGGAGAGAGAGAGAGAGAGAGAGAGTTTCTACTCAATTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: LLLAGINSFQGILFG*GEREREREFLLNSW Trigger: CCAGGAATTGAGTAGAAACTCTCTCTCTCTCTCTCTCTCTCCCCACCCAAACAATATTCCCTGAAAGCTATTAATTCCTGCAAGCAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS TCA 90 bp | GACTCCTCCATCAGATTTTGGACTTGCCAAATCTTCACCATTGCCTaGGCCAATTCCTTAGGGATGTGGATATGTTCTGTCATCTGTGTA | + |
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Preference number: 5 (lower is better) Translates to: DSSIRFWTCQIFTIA*ANSLGMWICSVICV Trigger: TACACAGATGACAGAACATATCCACATCCCTAAGGAATTGGCTCAGGCAATGGTGAAGATTTGGCAAGTCCAAAATCTGATGGAGGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS TCA 90 bp | CCCAAGCCGCCCATTGCTGACTGGCCATTTATAGAAACATTTGTTTaGGTTGAGCTCCTGCTTGCAGGAATTAATAGCTTTCAGGGAATA | + |
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Preference number: 5 (lower is better) Translates to: PKPPIADWPFIETFV*VELLLAGINSFQGI Trigger: TATTCCCTGAAAGCTATTAATTCCTGCAAGCAGGAGCTCAACTCAAACAAATGTTTCTATAAATGGCCAGTCAGCAATGGGCGGCTTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS CCA 90 bp | GTGGAGAGGAGACATTTGTTTCCTGTTTCAGCCCAGATTGGAGAATaGGTGAAAGTAAAATATTTATGTTCTTTGTACCCAGCTTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: VERRHLFPVSAQIGE*VKVKYLCSLYPACF Trigger: AAAACAAGCTGGGTACAAAGAACATAAATATTTTACTTTCACCCATTCTCCAATCTGGGCTGAAACAGGAAACAAATGTCTCCTCTCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS TCA 72 bp | AGCAGAGGAGCTGGGCAGAGGCTGGACGTGTCAGCGTaGGCCGGCCTGCCCCACCCTACATGTATGCATGGA | + |
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Preference number: 6 (lower is better) Translates to: SRGAGQRLDVSA*AGLPHPTCMHG Trigger: TCCATGCATACATGTAGGGTGGGGCAGGCCGGCTCACGCTGACACGTCCAGCCTCTGCCCAGCTCCTCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000634256.1 ENST00000659059.1 ENST00000659083.1 ENST00000666685.1 |
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| CDS GCA 72 bp | TGTCAGCGTGAGCCGGCCTGCCCCACCCTACATGTATaGATGGATTCTGGGCCTTGGGGTGAGCGCGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: CQREPACPTLHV*MDSGPWGERGR Trigger: TCTCCCGCGCTCACCCCAAGGCCCAGAATCCATGCATACATGTAGGGTGGGGCAGGCCGGCTCACGCTGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000634256.1 ENST00000659059.1 ENST00000659083.1 ENST00000666685.1 |
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| CDS GCA 72 bp | CTGGGCAGAGGCTGGACGTGTCAGCGTGAGCCGGCCTaGCCCACCCTACATGTATGCATGGATTCTGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LGRGWTCQREPA*PTLHVCMDSGP Trigger: AGGCCCAGAATCCATGCATACATGTAGGGTGGGGCAGGCCGGCTCACGCTGACACGTCCAGCCTCTGCCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000634256.1 ENST00000659059.1 ENST00000659083.1 ENST00000666685.1 |
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| CDS CCA 72 bp | AGCGTGAGCCGGCCTGCCCCACCCTACATGTATGCATaGATTCTGGGCCTTGGGGTGAGCGCGGGAGAACCA | + |
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Preference number: 6 (lower is better) Translates to: SVSRPAPPYMYA*ILGLGVSAGEP Trigger: TGGTTCTCCCGCGCTCACCCCAAGGCCCAGAATCCATGCATACATGTAGGGTGGGGCAGGCCGGCTCACGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000634256.1 ENST00000659059.1 ENST00000659083.1 ENST00000666685.1 |
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| CDS CAA 72 bp | GGCAATGCCACCTCCAAGGGTTTGCAGCCATCGCTGTaGGGGCCTCCCTTGTGGCAGACACCCATCTGGATG | + |
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Preference number: 6 (lower is better) Translates to: GNATSKGLQPSL*GPPLWQTPIWM Trigger: CATCCAGATGGGTGTCTGCCACAAGGGAGGCCCCAACAGCGATGGCTGCAAACCCTTGGAGGTGGCATTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634256.1 |
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| CDS CAA 72 bp | TTGACGTCCGCTTTTGGCAATGCCACCTCCAAGGGTTaGCAGCCATCGCTGTTGGGGCCTCCCTTGTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LTSAFGNATSKG*QPSLLGPPLWQ Trigger: CTGCCACAAGGGAGGCCCCAACAGCGATGGCTGCAAACCCTTGGAGGTGGCATTGCCAAAAGCGGACGTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000634256.1 ENST00000667354.1 |
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| CDS GCA 72 bp | AGAAGAGACCTCAGGAAAACATCTGGCGCAGGCTCCTaGATAAGCCAGTGGGTGCCCTGGCTAGACGCAACG | + |
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Preference number: 6 (lower is better) Translates to: RRDLRKTSGAGS*ISQWVPWLDAT Trigger: CGTTGCGTCTAGCCAGGGCACCCACTGGCTTATGCAGGAGCCTGCGCCAGATGTTTTCCTGAGGTCTCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS CAA 72 bp | GCAGCAGGCACTGTTCCTCAGAATCCAGATGATGGGTaGAGGCTGGGAAGGTGTGCTGGAGAGCTGGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: AAGTVPQNPDDG*RLGRCAGELGW Trigger: CCAACCCAGCTCTCCAGCACACCTTCCCAGCCTCAACCCATCATCTGGATTCTGAGGAACAGTGCCTGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659059.1 ENST00000667354.1 |
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| CDS GCA 72 bp | GCTGGGGAGATGATCCTGGACCTTCTGGATGGGCCATaGATGCATCACGAGTGTCCTCCTTCCCAGAATTCC | + |
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Preference number: 6 (lower is better) Translates to: AGEMILDLLDGP*MHHECPPSQNS Trigger: GGAATTCTGGGAAGGAGGACACTCGTGATGCATGCATGGCCCATCCAGAAGGTCCAGGATCATCTCCCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000634256.1 ENST00000659059.1 ENST00000659083.1 ENST00000666685.1 ENST00000667354.1 |
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| CDS TCA 72 bp | ACGTCCTCACTGGAGCCAAGAACCTCAGAATCCAGATaGTGGGTTGAGGCTGGGAAGGTGTGCTGGAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: TSSLEPRTSESR*WVEAGKVCWRA Trigger: AGCTCTCCAGCACACCTTCCCAGCCTCAACCCATCATCTGGATTCTGAGGTTCTTGGCTCCAGTGAGGACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420522.1 ENST00000635556.1 |
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| CDS GCA 72 bp | CAACTAGGAGACCCAGTGCCCATCTCCTGCCAGAACTaGTGCTTTGGGCGGTCTTCTCATTTGCTTCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: QLGDPVPISCQN*CFGRSSHLLLL Trigger: GAGGAGAAGCAAATGAGAAGACCGCCCAAAGCAGCAGTTCTGGCAGGAGATGGGCACTGGGTCTCCTAGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635556.1 |
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| CDS GCA 72 bp | CACTCCATTCTACCTTCAGGACATCCTGCCAGCATCTaGACTCAGCCACCAACTAGGAGACCCAGTGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: HSILPSGHPASI*TQPPTRRPSAH Trigger: ATGGGCACTGGGTCTCCTAGTTGGTGGCTGAGTGCAGATGCTGGCAGGATGTCCTGAAGGTAGAATGGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635556.1 |
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| CDS CCA 72 bp | CTAATCACGCCTGAGCTAGAGCAGACCACTGGAGCCTaGTTTGAGGATGGAAGGACCCTGACTTGGACTCTG | + |
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Preference number: 6 (lower is better) Translates to: LITPELEQTTGA*FEDGRTLTWTL Trigger: CAGAGTCCAAGTCAGGGTCCTTCCATCCTCAAACCAGGCTCCAGTGGTCTGCTCTAGCTCAGGCGTGATTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635556.1 |
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| CDS CCA 72 bp | GCACAAGGGGCCCTAGGAGTGAGTCGAGGAACCTGCTaGTACCTCTCCGAAGTGTTCCCATCTAGGATTTCA | + |
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Preference number: 6 (lower is better) Translates to: AQGALGVSRGTC*YLSEVFPSRIS Trigger: TGAAATCCTAGATGGGAACACTTCGGAGAGGTACCAGCAGGTTCCTCGACTCACTCCTAGGGCCCCTTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS CCA 72 bp | AGATCCTTGAGCAAGAAGAGACCTCAGGAAAACATCTaGCGCAGGCTCCTGCATAAGCCAGTGGGTGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: RSLSKKRPQENI*RRLLHKPVGAL Trigger: CAGGGCACCCACTGGCTTATGCAGGAGCCTGCGCCAGATGTTTTCCTGAGGTCTCTTCTTGCTCAAGGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS TCA 72 bp | CAGGAGGGAAGTTTGCTGGCAGAGGGTCTTTGGACTTaGACTGCAACATCGTCGGCTCTTCCTAGCTCACTG | + |
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Preference number: 6 (lower is better) Translates to: QEGSLLAEGLWT*TATSSALPSSL Trigger: CAGTGAGCTAGGAAGAGCCGACGATGTTGCAGTTCAAGTCCAAAGACCCTCTGCCAGCAAACTTCCCTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS GCA 72 bp | TGGGTGCCCTGGCTAGACGCAACGGAACAGATGATTTaGATTCTCTTACTGAAGGTCCCCAGGGACAAGATG | + |
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Preference number: 6 (lower is better) Translates to: WVPWLDATEQMI*ILLLKVPRDKM Trigger: CATCTTGTCCCTGGGGACCTTCAGTAAGAGAATGCAAATCATCTGTTCCGTTGCGTCTAGCCAGGGCACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS CCA 72 bp | AGACCAGAGGTTGCTTGTAACCTCTGGGCCTTTCTGTaGCCCAGAGGTGGCCACAGAAAGCAGAAATCTGTT | + |
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Preference number: 6 (lower is better) Translates to: RPEVACNLWAFL*PRGGHRKQKSV Trigger: AACAGATTTCTGCTTTCTGTGGCCACCTCTGGGCCACAGAAAGGCCCAGAGGTTACAAGCAACCTCTGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000634256.1 ENST00000659059.1 ENST00000659083.1 ENST00000666685.1 ENST00000667354.1 |
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| CDS CAA 90 bp | CATAAGCCAGTGGGTGCCCTGGCTAGACGCAACGGAACAGATGATTaGCATTCTCTTACTGAAGGTCCCCAGGGACAAGATGCCACATCT | + |
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Preference number: 6 (lower is better) Translates to: HKPVGALARRNGTDD*HSLTEGPQGQDATS Trigger: AGATGTGGCATCTTGTCCCTGGGGACCTTCAGTAAGAGAATGCAAATCATCTGTTCCGTTGCGTCTAGCCAGGGCACCCACTGGCTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS GCA 72 bp | GGGATGTGGATATGTTCTGTCATCTGTGTAGACCATTaGTCATCTCTCTCCATACCTACCCACGAGCCCCTC | + |
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Preference number: 6 (lower is better) Translates to: GMWICSVICVDH*SSLSIPTHEPL Trigger: GAGGGGCTCGTGGGTAGGTATGGAGAGAGATGAGCAATGGTCTACACAGATGACAGAACATATCCACATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420522.1 ENST00000661628.1 |
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| CDS CAA 90 bp | AGGTGGCCACAGAAAGCAGAAATCTGTTCACTCCATCATCAGGCATaGACTGAGCAGCAGGCACTGTTCCTCAGAATCCAGATGATGGGT | + |
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Preference number: 6 (lower is better) Translates to: RWPQKAEICSLHHQA*TEQQALFLRIQMMG Trigger: ACCCATCATCTGGATTCTGAGGAACAGTGCCTGCTGCTCAGTCAATGCCTGATGATGGAGTGAACAGATTTCTGCTTTCTGTGGCCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659059.1 ENST00000667354.1 |
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| CDS TCA 72 bp | TCCAAGGCCATGGTGACCATGGTAAACTTGAGTTCCTaGGGCAGTGAGATGGCTGCTACTAGTGACATGCAT | + |
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Preference number: 6 (lower is better) Translates to: SKAMVTMVNLSS*GSEMAATSDMH Trigger: ATGCATGTCACTAGTAGCAGCCATCTCACTGCCTCAGGAACTCAAGTTTACCATGGTCACCATGGCCTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420522.1 ENST00000635556.1 |
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| CDS TCA 72 bp | AGACCACTGGAGCCTGGTTTGAGGATGGAAGGACCCTaGCTTGGACTCTGTTTTGGTTGCTTTTACTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: RPLEPGLRMEGP*LGLCFGCFYSG Trigger: ACCAGAGTAAAAGCAACCAAAACAGAGTCCAAGTCAGGGTCCTTCCATCCTCAAACCAGGCTCCAGTGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635556.1 |
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| CDS GCA 72 bp | TTTTGCATTACATCTATTGACGTCCGCTTTTGGCAATaGCACCTCCAAGGGTTTGCAGCCATCGCTGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: FCITSIDVRFWQ*HLQGFAAIAVG Trigger: CCCAACAGCGATGGCTGCAAACCCTTGGAGGTGGCATTGCCAAAAGCGGACGTCAATAGATGTAATGCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000634256.1 ENST00000635556.1 ENST00000659059.1 ENST00000659083.1 ENST00000666685.1 ENST00000667354.1 |
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| CDS CCA 72 bp | AAAGATTTAGCTCCTCCGAGCAGGAGGGAAGTTTGCTaGCAGAGGGTCTTTGGACTTGAACTGCAACATCGT | + |
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Preference number: 6 (lower is better) Translates to: KDLAPPSRREVC*QRVFGLELQHR Trigger: ACGATGTTGCAGTTCAAGTCCAAAGACCCTCTGCCAGCAAACTTCCCTCCTGCTCGGAGGAGCTAAATCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS CAA 72 bp | CTCCATCCCGCCAGACTCCTCCATCAGATTTTGGACTaGCCAAATCTTCACCATTGCCTGAGCCAATTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LHPARLLHQILD*PNLHHCLSQFL Trigger: AAGGAATTGGCTCAGGCAATGGTGAAGATTTGGCAAGTCCAAAATCTGATGGAGGAGTCTGGCGGGATGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS GCA 72 bp | ACAAAAGATTTAGCTCCTCCGAGCAGGAGGGAAGTTTaGTGGCAGAGGGTCTTTGGACTTGAACTGCAACAT | + |
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Preference number: 6 (lower is better) Translates to: TKDLAPPSRREV*WQRVFGLELQH Trigger: ATGTTGCAGTTCAAGTCCAAAGACCCTCTGCCAGCAAACTTCCCTCCTGCTCGGAGGAGCTAAATCTTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS CAA 90 bp | GCCTGGTTTGAGGATGGAAGGACCCTGACTTGGACTCTGTTTTGGTaGCTTTTACTCTGGTTTACTCCAAAGCTGCTTAGGGATGTGGAT | + |
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Preference number: 6 (lower is better) Translates to: AWFEDGRTLTWTLFW*LLLWFTPKLLRDVD Trigger: ATCCACATCCCTAAGCAGCTTTGGAGTAAACCAGAGTAAAAGCAACCAAAACAGAGTCCAAGTCAGGGTCCTTCCATCCTCAAACCAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420522.1 |
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| CDS CAA 90 bp | AGGTGGCCACAGAAAGCAGAAATCTGTTCACTCCATCATCAGGCATaGACTGAGCAGCAGGCACTGTTCTTTCACTCAGTATTTCCCAAC | + |
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Preference number: 6 (lower is better) Translates to: RWPQKAEICSLHHQA*TEQQALFFHSVFPN Trigger: GTTGGGAAATACTGAGTGAAAGAACAGTGCCTGCTGCTCAGTCAATGCCTGATGATGGAGTGAACAGATTTCTGCTTTCTGTGGCCACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000634256.1 ENST00000666685.1 |
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| CDS CAA 90 bp | GTGCCCATCTCCTGCCAGAACTGCTGCTTTGGGCGGTCTTCTCATTaGCTTCTCCTCATTATTTCTCCATGTGGTAGCCAAAGTTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: VPISCQNCCFGRSSH*LLLIISPCGSQSFF Trigger: AAAGAAACTTTGGCTACCACATGGAGAAATAATGAGGAGAAGCAAATGAGAAGACCGCCCAAAGCAGCAGTTCTGGCAGGAGATGGGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635556.1 |
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| CDS CAA 90 bp | TGTTCACTCCATCATCAGGCATTGACTGAGCAGCAGGCACTGTTTTaGTCTTACTTCCTCCTTGGAACACATCTCCTCTTGACTCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: CSLHHQALTEQQALF*SYFLLGTHLLLTPV Trigger: CACAGGAGTCAAGAGGAGATGTGTTCCAAGGAGGAAGTAAGACAAAAACAGTGCCTGCTGCTCAGTCAATGCCTGATGATGGAGTGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659083.1 |
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| CDS CAA 90 bp | AGGTGGCCACAGAAAGCAGAAATCTGTTCACTCCATCATCAGGCATaGACTGAGCAGCAGGCACTGTTTTTGTCTTACTTCCTCCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: RWPQKAEICSLHHQA*TEQQALFLSYFLLG Trigger: TCCAAGGAGGAAGTAAGACAAAAACAGTGCCTGCTGCTCAGTCAATGCCTGATGATGGAGTGAACAGATTTCTGCTTTCTGTGGCCACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659083.1 |
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| CDS CCA 72 bp | ACTGGAGCCTGGTTTGAGGATGGAAGGACCCTGACTTaGACTCTGTTTTGGTTGCTTTTACTCTGGTTTACT | + |
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Preference number: 6 (lower is better) Translates to: TGAWFEDGRTLT*TLFWLLLLWFT Trigger: AGTAAACCAGAGTAAAAGCAACCAAAACAGAGTCCAAGTCAGGGTCCTTCCATCCTCAAACCAGGCTCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000420522.1 ENST00000635556.1 |
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| CDS CCA 72 bp | CACTATTTTTGCATTACATCTATTGACGTCCGCTTTTaGCAATGCCACCTCCAAGGGTTTGCAGCCATCGCT | + |
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Preference number: 6 (lower is better) Translates to: HYFCITSIDVRF*QCHLQGFAAIA Trigger: AGCGATGGCTGCAAACCCTTGGAGGTGGCATTGCCAAAAGCGGACGTCAATAGATGTAATGCAAAAATAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000634256.1 ENST00000635556.1 ENST00000659059.1 ENST00000659083.1 ENST00000661628.1 ENST00000666685.1 ENST00000667354.1 |
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| CDS CAA 72 bp | GAGGATGGAAGGACCCTGACTTGGACTCTGTTTTGGTaGCTTTTACTCTGGTTTACTCCAAAGCTGCTTAGG | + |
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Preference number: 6 (lower is better) Translates to: EDGRTLTWTLFW*LLLWFTPKLLR Trigger: CCTAAGCAGCTTTGGAGTAAACCAGAGTAAAAGCAACCAAAACAGAGTCCAAGTCAGGGTCCTTCCATCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420522.1 |
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| CDS TCA 72 bp | AGCAGAAATCTGTTCACTCCATCATCAGGCATTGACTaGGCAGCAGGCACTGTTTTTGTCTTACTTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SRNLFTPSSGID*AAGTVFVLLPP Trigger: AGGAGGAAGTAAGACAAAAACAGTGCCTGCTGCTCAGTCAATGCCTGATGATGGAGTGAACAGATTTCTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659083.1 |
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| CDS CCA 72 bp | GAGAGAGAGAGAGAGAGAGAGTTTCTACTCAATTCCTaGAAATGGCTTGAGAGCCACAGAAAAGCCTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: EREREREFLLNS*KWLESHRKALA Trigger: TGCTAAGGCTTTTCTGTGGCTCTCAAGCCATTTCCAGGAATTGAGTAGAAACTCTCTCTCTCTCTCTCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS CAA 72 bp | GAGGATGGAAGGACCCTGACTTGGACTCTGTTTTGGTaGCTTTTACTCTGGTTTACTCCAAAGCTCTGTGAA | + |
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Preference number: 6 (lower is better) Translates to: EDGRTLTWTLFW*LLLWFTPKLCE Trigger: TTCACAGAGCTTTGGAGTAAACCAGAGTAAAAGCAACCAAAACAGAGTCCAAGTCAGGGTCCTTCCATCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635556.1 |
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| CDS TCA 72 bp | GGCACACGTGGACATGTTCAATTCCTGATAATTCCTTaGGCTGTGTGCCTATGGTTTGTGCACTATTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: GTRGHVQFLIIP*AVCLWFVHYSF Trigger: GAAAGAATAGTGCACAAACCATAGGCACACAGCTCAAGGAATTATCAGGAATTGAACATGTCCACGTGTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000420522.1 ENST00000635556.1 ENST00000659059.1 ENST00000661628.1 ENST00000667354.1 |
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| CDS TCA 72 bp | TCAGACCTGTTAACTGGGTGGCTTTTCTACAACGGCTaGATTAGTGAAGGAATGACCAAGCTCTGCCAAATT | + |
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Preference number: 6 (lower is better) Translates to: SDLLTGWLFYNG*ISEGMTKLCQI Trigger: AATTTGGCAGAGCTTGGTCATTCCTTCACTAATTCAGCCGTTGTAGAAAAGCCACCCAGTTAACAGGTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000634256.1 ENST00000659059.1 ENST00000659083.1 ENST00000666685.1 |
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| CDS GCA 72 bp | CTCCATCAGATTTTGGACTTGCCAAATCTTCACCATTaGCTGAGCCAATTCCTTAGGGATGTGGATATGTTC | + |
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Preference number: 6 (lower is better) Translates to: LHQILDLPNLHH*LSQFLRDVDMF Trigger: GAACATATCCACATCCCTAAGGAATTGGCTCAGGCAATGGTGAAGATTTGGCAAGTCCAAAATCTGATGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS CAA 72 bp | GGGCACACGTGGACATGTTCAATTCCTGATAATTCCTaGAGCTGTGTGCCTATGGTTTGTGCACTATTCTTT | + |
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Preference number: 6 (lower is better) Translates to: GHTWTCSIPDNS*SCVPMVCALFF Trigger: AAAGAATAGTGCACAAACCATAGGCACACAGCTCAAGGAATTATCAGGAATTGAACATGTCCACGTGTGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000420522.1 ENST00000635556.1 ENST00000659059.1 ENST00000661628.1 ENST00000667354.1 |
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| CDS CAA 90 bp | GGATTTCAGATGCAGCCCTTGTGGAGGTTAACTTTATGTGTCAACTaGATTGGGCCGAGATATTGGCCAAATATTATTCTGAATGTATCT | + |
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Preference number: 6 (lower is better) Translates to: GFQMQPLWRLTLCVN*IGPRYWPNIILNVS Trigger: AGATACATTCAGAATAATATTTGGCCAATATCTCGGCCCAATCAAGTTGACACATAAAGTTAACCTCCACAAGGGCTGCATCTGAAATCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS TCA 72 bp | TTGGTTGCTTTTACTCTGGTTTACTCCAAAGCTCTGTaGATCTTAACAGCAAGCAGAGTTACTTCCCATTAC | + |
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Preference number: 6 (lower is better) Translates to: LVAFTLVYSKAL*ILTASRVTSHY Trigger: GTAATGGGAAGTAACTCTGCTTGCTGTTAAGATTCACAGAGCTTTGGAGTAAACCAGAGTAAAAGCAACCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635556.1 |
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| CDS TCA 72 bp | CCCATTGCTGACTGGCCATTTATAGAAACATTTGTTTaGGTTGAGCTCCTGCTTGCAGGAATTAATAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: PIADWPFIETFV*VELLLAGINSF Trigger: AAAGCTATTAATTCCTGCAAGCAGGAGCTCAACTCAAACAAATGTTTCTATAAATGGCCAGTCAGCAATGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS CAA 72 bp | TGTTTTTGGATGAGATTAGCATTCAAATTAGTAGATTaGAGTAGAGCAGATGAGCTCCATAATGCAGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: CFWMRLAFKLVD*SRADELHNAGG Trigger: CCCACCTGCATTATGGAGCTCATCTGCTCTACTCAAATCTACTAATTTGAATGCTAATCTCATCCAAAAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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| CDS TCA 72 bp | TTAACAGCAAGCAGAGTTACTTCCCATTACAAAAGATaGGAATTCCAGATATTTGTATCACCTAGGCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: LTASRVTSHYKR*EFQIFVSPRLC Trigger: GCAAAGCCTAGGTGATACAAATATCTGGAATTCTCATCTTTTGTAATGGGAAGTAACTCTGCTTGCTGTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420522.1 ENST00000635556.1 |
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| CDS CCA 72 bp | TTAACTTTATGTGTCAACTTGATTGGGCCGAGATATTaGCCAAATATTATTCTGAATGTATCTGTGACAGTG | + |
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Preference number: 6 (lower is better) Translates to: LTLCVNLIGPRY*PNIILNVSVTV Trigger: CACTGTCACAGATACATTCAGAATAATATTTGGCCAATATCTCGGCCCAATCAAGTTGACACATAAAGTTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661628.1 |
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