Pregenerated sensors for LINC01643 (Homo sapiens)
Ensembl gene IDs: ENSG00000236052Ensembl transcript IDs: ENST00000412218.1, ENST00000652942.1, ENST00000653369.1, ENST00000654009.1, ENST00000655455.1, ENST00000655904.1, ENST00000656244.1, ENST00000656434.1, ENST00000657115.1, ENST00000658014.1, ENST00000658055.1, ENST00000658589.1, ENST00000658699.1, ENST00000659067.1, ENST00000661800.1, ENST00000661903.1, ENST00000663820.1, ENST00000664028.1, ENST00000664480.1, ENST00000664743.1, ENST00000665392.1, ENST00000665458.1, ENST00000665701.1, ENST00000667570.1, ENST00000668175.1, ENST00000668901.1, ENST00000669488.1, ENST00000669802.1, ENST00000670329.1, ENST00000670742.1, ENST00000671554.1
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTCAGCTTTCACCCATTCTGCAGGAGCTGTGGTTCTGCAGCTCCCTaGCCAGGGACAGCTTCATCCTGCACAGGACCATGCATGCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSFHPFCRSCGSAAP*PGTASSCTGPCMQG Trigger: ACCCTGCATGCATGGTCCTGTGCAGGATGAAGCTGTCCCTGGTCAGGGAGCTGCAGAACCACAGCTCCTGCAGAATGGGTGAAAGCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668901.1 |
||
| CDS CCA 90 bp | TTGGACTCCATCTGTGACATTTTCTTTAGCACCTCAGGTCCCTTCTaGGTCAGAGACTGCTGGCTCCAGCACTGGCCTCACACCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LDSICDIFFSTSGPF*VRDCWLQHWPHTPA Trigger: TGCTGGGGTGTGAGGCCAGTGCTGGAGCCAGCAGTCTCTGACCCAGAAGGGACCTGAGGTGCTAAAGAAAATGTCACAGATGGAGTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658589.1 |
||
| CDS CCA 90 bp | AATAGGCAAAGCAAGCCTGTTTTCTTTAGCACCTCAGGTCCCTTCTaGGTCAGAGACTGCTGGCTCCAGCACTGGCCTCACACCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: NRQSKPVFFSTSGPF*VRDCWLQHWPHTPA Trigger: TGCTGGGGTGTGAGGCCAGTGCTGGAGCCAGCAGTCTCTGACCCAGAAGGGACCTGAGGTGCTAAAGAAAACAGGCTTGCTTTGCCTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665392.1 |
||
| CDS GCA 90 bp | GACCAGGGACAGCTTCATCCTGCACAGGACCATGCATGCAGGGTGTaGTCAATCATCAGTGGTGACTGCCGAACTCCTTCCATCATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: DQGQLHPAQDHACRV*SIISGDCRTPSIIL Trigger: GAGAATGATGGAAGGAGTTCGGCAGTCACCACTGATGATTGAGCACACCCTGCATGCATGGTCCTGTGCAGGATGAAGCTGTCCCTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668901.1 |
||
| CDS TCA 90 bp | TCCTGCACAGGACCATGCATGCAGGGTGTGCTCAATCATCAGTGGTaGCTGCCGAACTCCTTCCATCATTCTCACATGCTCCACAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SCTGPCMQGVLNHQW*LPNSFHHSHMLHSN Trigger: GTTGCTGTGGAGCATGTGAGAATGATGGAAGGAGTTCGGCAGTCACCACTGATGATTGAGCACACCCTGCATGCATGGTCCTGTGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668901.1 |
||
| CDS TCA 90 bp | TCTCCCCAACCCTGGCATCTAGCAGATGCTCACCAGATATCTACATaGATATTCTACATCTTCCAACACAGCGGGCTCTCCAGGGGACCG | + |
|
Preference number: 5 (lower is better) Translates to: SPQPWHLADAHQIST*IFYIFQHSGLSRGP Trigger: CGGTCCCCTGGAGAGCCCGCTGTGTTGGAAGATGTAGAATATTCATGTAGATATCTGGTGAGCATCTGCTAGATGCCAGGGTTGGGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656244.1 |
||
| CDS GCA 90 bp | TTTGGAGAAATACCAGGGCAACGAGGAGGAACCAGCAGGAAAAGGTaGACTCCCACAGTTGAGGATGATGAGCCTCTGTGGGTTTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FGEIPGQRGGTSRKR*TPTVEDDEPLWVCG Trigger: TCCACAAACCCACAGAGGCTCATCATCCTCAACTGTGGGAGTGCACCTTTTCCTGCTGGTTCCTCCTCGTTGCCCTGGTATTTCTCCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655904.1 ENST00000665458.1 ENST00000665701.1 ENST00000670742.1 |
||
| CDS CCA 90 bp | GGCCCTCTGGAATTAGGGTCTTATGACCTCTGTAGCGAGTCCACATaGAAGTGCCTACCACACAAAGGGCATCTCTGGGAATCAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: GPLELGSYDLCSEST*KCLPHKGHLWESVM Trigger: CATCACTGATTCCCAGAGATGCCCTTTGTGTGGTAGGCACTTCCATGTGGACTCGCTACAGAGGTCATAAGACCCTAATTCCAGAGGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000652942.1 ENST00000653369.1 ENST00000654009.1 ENST00000656244.1 ENST00000656434.1 ENST00000657115.1 ENST00000658055.1 ENST00000658699.1 ENST00000661903.1 ENST00000664028.1 ENST00000664480.1 ENST00000664743.1 ENST00000665392.1 ENST00000671554.1 |
||
| CDS CCA 90 bp | ACGCCTATCTTGGACCTATGCATGTACCTCTGTAGCGAGTCCACATaGAAGTGCCTACCACACAAAGGGCATCTCTGGGAATCAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TPILDLCMYLCSEST*KCLPHKGHLWESVM Trigger: CATCACTGATTCCCAGAGATGCCCTTTGTGTGGTAGGCACTTCCATGTGGACTCGCTACAGAGGTACATGCATAGGTCCAAGATAGGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655904.1 ENST00000665458.1 ENST00000665701.1 ENST00000670742.1 |
||
| CDS TCA 90 bp | CTTCCTTCTGGTTATAGGGTAGGGCCCTCTGGAATTAGGGTCTTATaGCTTTTCTTTAGCACCTCAGGTCCCTTCTGGGTCAGAGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPSGYRVGPSGIRVL*LFFSTSGPFWVRDC Trigger: GCAGTCTCTGACCCAGAAGGGACCTGAGGTGCTAAAGAAAAGTCATAAGACCCTAATTCCAGAGGGCCCTACCCTATAACCAGAAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659067.1 |
||
| CDS TCA 90 bp | CTTCCTTCTGGTTATAGGGTAGGGCCCTCTGGAATTAGGGTCTTATaGCCACACAAAGGGCATCTCTGGGAATCAGTGATGGACACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPSGYRVGPSGIRVL*PHKGHLWESVMDTW Trigger: CCAAGTGTCCATCACTGATTCCCAGAGATGCCCTTTGTGTGGTCATAAGACCCTAATTCCAGAGGGCCCTACCCTATAACCAGAAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663820.1 |
||
| CDS GCA 90 bp | CTGGAATTAGGGTCTTATGACCTCTGTAGCGAGTCCACATGGAAGTaGCTACCACACAAAGGGCATCTCTGGGAATCAGTGATGGACACT | + |
|
Preference number: 5 (lower is better) Translates to: LELGSYDLCSESTWK*LPHKGHLWESVMDT Trigger: AGTGTCCATCACTGATTCCCAGAGATGCCCTTTGTGTGGTAGGCACTTCCATGTGGACTCGCTACAGAGGTCATAAGACCCTAATTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000652942.1 ENST00000653369.1 ENST00000654009.1 ENST00000656244.1 ENST00000656434.1 ENST00000657115.1 ENST00000658055.1 ENST00000658699.1 ENST00000661903.1 ENST00000664028.1 ENST00000664480.1 ENST00000664743.1 ENST00000665392.1 ENST00000671554.1 |
||
| CDS GCA 90 bp | ATCTTGGACCTATGCATGTACCTCTGTAGCGAGTCCACATGGAAGTaGCTACCACACAAAGGGCATCTCTGGGAATCAGTGATGGACACT | + |
|
Preference number: 5 (lower is better) Translates to: ILDLCMYLCSESTWK*LPHKGHLWESVMDT Trigger: AGTGTCCATCACTGATTCCCAGAGATGCCCTTTGTGTGGTAGGCACTTCCATGTGGACTCGCTACAGAGGTACATGCATAGGTCCAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655904.1 ENST00000665458.1 ENST00000665701.1 ENST00000670742.1 |
||
| CDS CCA 90 bp | CTGTCCATGTTGTTCAGGAACTCCAAACTCTGTAGCGAGTCCACATaGAAGTGCCTACCACACAAAGGGCATCTCTGGGAATCAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LSMLFRNSKLCSEST*KCLPHKGHLWESVM Trigger: CATCACTGATTCCCAGAGATGCCCTTTGTGTGGTAGGCACTTCCATGTGGACTCGCTACAGAGTTTGGAGTTCCTGAACAACATGGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000655455.1 ENST00000661800.1 ENST00000667570.1 ENST00000669488.1 ENST00000669802.1 ENST00000670329.1 |
||
| CDS TCA 90 bp | GAGGGGTCATCCTTAGCAAAAGTCTACAAGCTGGAATATAGGCCATaGGCTGAGGGACGCCTATCTTGGACCTATGCATGTACCTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: EGSSLAKVYKLEYRP*AEGRLSWTYACTSV Trigger: TACAGAGGTACATGCATAGGTCCAAGATAGGCGTCCCTCAGCTCATGGCCTATATTCCAGCTTGTAGACTTTTGCTAAGGATGACCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000655904.1 ENST00000665458.1 ENST00000665701.1 ENST00000670742.1 |
||
| CDS GCA 90 bp | ATGTTGTTCAGGAACTCCAAACTCTGTAGCGAGTCCACATGGAAGTaGCTACCACACAAAGGGCATCTCTGGGAATCAGTGATGGACACT | + |
|
Preference number: 5 (lower is better) Translates to: MLFRNSKLCSESTWK*LPHKGHLWESVMDT Trigger: AGTGTCCATCACTGATTCCCAGAGATGCCCTTTGTGTGGTAGGCACTTCCATGTGGACTCGCTACAGAGTTTGGAGTTCCTGAACAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000655455.1 ENST00000661800.1 ENST00000667570.1 ENST00000669488.1 ENST00000669802.1 ENST00000670329.1 |
||
| CDS CCA 90 bp | GTAAATGAGCTAAAGCAGCTCTGCTTCTGGGCATTGACTGTCTACTaGTTGAGGGTGATGAGGATCACTAGGCCGCATCTTTCTCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: VNELKQLCFWALTVY*LRVMRITRPHLSHH Trigger: GTGATGAGAAAGATGCGGCCTAGTGATCCTCATCACCCTCAACCAGTAGACAGTCAATGCCCAGAAGCAGAGCTGCTTTAGCTCATTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668175.1 |
||
| CDS GCA 90 bp | TGTGTGCAGAGCGATAAGAGATCAAAGCTGAGTAGATTCCTCGGCTaGGTGCTTAGTTGTAATTCTGCAGAACCTCCAGTTCAGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CVQSDKRSKLSRFLG*VLSCNSAEPPVQLS Trigger: GGACAACTGAACTGGAGGTTCTGCAGAATTACAACTAAGCACGCAGCCGAGGAATCTACTCAGCTTTGATCTCTTATCGCTCTGCACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000412218.1 ENST00000652942.1 ENST00000654009.1 ENST00000655455.1 ENST00000655904.1 ENST00000656434.1 ENST00000658014.1 ENST00000658055.1 ENST00000658589.1 ENST00000659067.1 ENST00000661800.1 ENST00000661903.1 ENST00000664480.1 ENST00000664743.1 ENST00000665458.1 ENST00000668175.1 ENST00000668901.1 ENST00000669488.1 |
||
| CDS GCA 90 bp | GCCATCAAGCACCCTGATGTAGAAGCTCATTTCACTCTCAGCTTGTaGAATGAATGTTCCTCCCATCAGGTTGCTGGCTTTCTGGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: AIKHPDVEAHFTLSL*NECSSHQVAGFLVI Trigger: GATAACCAGAAAGCCAGCAACCTGATGGGAGGAACATTCATTGCACAAGCTGAGAGTGAAATGAGCTTCTACATCAGGGTGCTTGATGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665458.1 |
||
| CDS TCA 90 bp | TTACAGAGAAAGGGCTGTGTGTGCAGAGCGATAAGAGATCAAAGCTaGGTAGATTCCTCGGCTGCGTGCTTAGTTGTAATTCTGCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LQRKGCVCRAIRDQS*VDSSAACLVVILQN Trigger: GTTCTGCAGAATTACAACTAAGCACGCAGCCGAGGAATCTACTCAGCTTTGATCTCTTATCGCTCTGCACACACAGCCCTTTCTCTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000412218.1 ENST00000652942.1 ENST00000654009.1 ENST00000655455.1 ENST00000655904.1 ENST00000656434.1 ENST00000658014.1 ENST00000658055.1 ENST00000658589.1 ENST00000659067.1 ENST00000661800.1 ENST00000661903.1 ENST00000664480.1 ENST00000664743.1 ENST00000665458.1 ENST00000668175.1 ENST00000668901.1 ENST00000669488.1 |
||
| CDS TCA 90 bp | AATGACTGGAGGAAGAGATGGAATTCTAGGATATCAGCAGGACAATaGCATGTGTGGGGGTCTATTTATTCCCTTCCTCCCCACAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: NDWRKRWNSRISAGQ*HVWGSIYSLPPHNG Trigger: CCCATTGTGGGGAGGAAGGGAATAAATAGACCCCCACACATGTCATTGTCCTGCTGATATCCTAGAATTCCATCTCTTCCTCCAGTCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665701.1 |
||
| CDS TCA 90 bp | CTGCAATCAGTCACTAGGCTCTTGGGAAAGCAGGGCACAGGCAAATaGGAACTTGAATCAGAATGGAGCAGGCCGTTATTTTGTTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LQSVTRLLGKQGTGK*ELESEWSRPLFCFW Trigger: CCAAAAACAAAATAACGGCCTGCTCCATTCTGATTCAAGTTCTCATTTGCCTGTGCCCTGCTTTCCCAAGAGCCTAGTGACTGATTGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658589.1 |
||
| CDS TCA 90 bp | TTCTTGTCTTGGCTGGCCTCACTCTTGTCTATGGTCACTTGTAAATaGGCTAAAGCAGCTCTGCTTCTGGGCATTGACTGTCTACTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FLSWLASLLSMVTCK*AKAALLLGIDCLLV Trigger: AACCAGTAGACAGTCAATGCCCAGAAGCAGAGCTGCTTTAGCTCATTTACAAGTGACCATAGACAAGAGTGAGGCCAGCCAAGACAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668175.1 |
||
| CDS CCA 90 bp | AACCAAGAAGTGGACCATTACCAGACGCTGAATCTGCTGGTGACTTaGTTTTGGACTTCTCAGCCTCCAGAATTTTCTTTAGCACCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: NQEVDHYQTLNLLVT*FWTSQPPEFSLAPQ Trigger: CTGAGGTGCTAAAGAAAATTCTGGAGGCTGAGAAGTCCAAAACCAAGTCACCAGCAGATTCAGCGTCTGGTAATGGTCCACTTCTTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000658014.1 ENST00000668175.1 ENST00000668901.1 |
||
| CDS CCA 90 bp | CTAAGCTCACAGAAATCAAGGGTCTGCAATCAGTCACTAGGCTCTTaGGAAAGCAGGGCACAGGCAAATGAGAACTTGAATCAGAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSSQKSRVCNQSLGS*ESRAQANENLNQNG Trigger: TCCATTCTGATTCAAGTTCTCATTTGCCTGTGCCCTGCTTTCCCAAGAGCCTAGTGACTGATTGCAGACCCTTGATTTCTGTGAGCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658589.1 |
||
| CDS CCA 90 bp | TTTCTCATCACTTGGCAGGGTAGCTTGGGCAATGCACATGACTCCTaGAAGAGCTTTCAGAGGCAGCCTTGTATTTTGTTCCAATTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FLITWQGSLGNAHDS*KSFQRQPCILFQFS Trigger: AGAGAATTGGAACAAAATACAAGGCTGCCTCTGAAAGCTCTTCCAGGAGTCATGTGCATTGCCCAAGCTACCCTGCCAAGTGATGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668175.1 |
||
| CDS CCA 90 bp | TCTTGTCTATGGTCACTTGTAAATGAGCTAAAGCAGCTCTGCTTCTaGGCATTGACTGTCTACTGGTTGAGGGTGATGAGGATCACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SCLWSLVNELKQLCF*ALTVYWLRVMRITR Trigger: CCTAGTGATCCTCATCACCCTCAACCAGTAGACAGTCAATGCCCAGAAGCAGAGCTGCTTTAGCTCATTTACAAGTGACCATAGACAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668175.1 |
||
| CDS TCA 90 bp | CTTCCTTCTGGTTATAGGGTAGGGCCCTCTGGAATTAGGGTCTTATaGCCTGATGTAGAAGCTCATTTCACTCTCAGCTTGTGCAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: LPSGYRVGPSGIRVL*PDVEAHFTLSLCNE Trigger: TTCATTGCACAAGCTGAGAGTGAAATGAGCTTCTACATCAGGTCATAAGACCCTAATTCCAGAGGGCCCTACCCTATAACCAGAAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658589.1 |
||
| CDS CCA 90 bp | ACAATGACATGTGTGGGGGTCTATTTATTCCCTTCCTCCCCACAATaGGAGCAGAAGAGTCACTCCTCATTTCACAACATGAAAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TMTCVGVYLFPSSPQ*EQKSHSSFHNMKGR Trigger: TCTTCCTTTCATGTTGTGAAATGAGGAGTGACTCTTCTGCTCCCATTGTGGGGAGGAAGGGAATAAATAGACCCCCACACATGTCATTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655904.1 ENST00000665701.1 |
||
| CDS TCA 90 bp | AAAGTATGGACAGCCATGCAGAAATATGACTGGACAAAAGGCAAATaGTCGAATGCTAACAGAGTGGAGAAATCCAGCAAGGGCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KVWTAMQKYDWTKGK*SNANRVEKSSKGCL Trigger: CAGACAGCCCTTGCTGGATTTCTCCACTCTGTTAGCATTCGATCATTTGCCTTTTGTCCAGTCATATTTCTGCATGGCTGTCCATACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 23 transcripts: ENST00000652942.1 ENST00000653369.1 ENST00000654009.1 ENST00000655455.1 ENST00000656244.1 ENST00000656434.1 ENST00000657115.1 ENST00000658055.1 ENST00000658589.1 ENST00000658699.1 ENST00000659067.1 ENST00000661800.1 ENST00000661903.1 ENST00000663820.1 ENST00000664028.1 ENST00000664480.1 ENST00000664743.1 ENST00000665392.1 ENST00000667570.1 ENST00000669488.1 ENST00000669802.1 ENST00000670329.1 ENST00000671554.1 |
||
| CDS TCA 90 bp | CTGCTTGCAAATTACTGGCAAGTGTCACTTCTGTGTATGTTCTCTTaGTGGACACATCAGCACAAAGATATTCCTTTCAGAGGCAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLANYWQVSLLCMFS*WTHQHKDIPFRGSL Trigger: AAGGCTGCCTCTGAAAGGAATATCTTTGTGCTGATGTGTCCATCAAGAGAACATACACAGAAGTGACACTTGCCAGTAATTTGCAAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 27 transcripts: ENST00000412218.1 ENST00000652942.1 ENST00000654009.1 ENST00000655455.1 ENST00000655904.1 ENST00000656244.1 ENST00000656434.1 ENST00000657115.1 ENST00000658055.1 ENST00000658589.1 ENST00000658699.1 ENST00000659067.1 ENST00000661800.1 ENST00000661903.1 ENST00000663820.1 ENST00000664028.1 ENST00000664480.1 ENST00000664743.1 ENST00000665392.1 ENST00000665458.1 ENST00000665701.1 ENST00000667570.1 ENST00000668901.1 ENST00000669488.1 ENST00000669802.1 ENST00000670742.1 ENST00000671554.1 |
||
| CDS TCA 90 bp | GGAAACTTGTTGATCACCTTAGCTAGAGGAAGAGAAAGTCATCACTaGGTAGTTAGTGCTCCAATTCTGTGCCATGAAGCATGGAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: GNLLITLARGRESHH*VVSAPILCHEAWNP Trigger: TGGATTCCATGCTTCATGGCACAGAATTGGAGCACTAACTACTCAGTGATGACTTTCTCTTCCTCTAGCTAAGGTGATCAACAAGTTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000655455.1 ENST00000661800.1 ENST00000667570.1 ENST00000669802.1 ENST00000670329.1 |
||
| CDS TCA 90 bp | CACATCAGCACAAAGATATTCTTAGCTCACAGTTCTACAGGCTGTTaGTCTGAACTGGGCTTAAATGGTCAGTTCTTCTTGTCTTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HISTKIFLAHSSTGC*SELGLNGQFFLSWL Trigger: CAGCCAAGACAAGAAGAACTGACCATTTAAGCCCAGTTCAGATCAACAGCCTGTAGAACTGTGAGCTAAGAATATCTTTGTGCTGATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668175.1 |
||
| CDS TCA 90 bp | CCCTTTTCCAGCTTGTACCCCTGTATTTGTATCTATTTCTTGCCTTaGAATGGTAGGTCCTTGAGGGTTCATGCTTGCTTCAACTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: PFSSLYPCICIYFLP*NGRSLRVHACFNLT Trigger: AGTCAAGTTGAAGCAAGCATGAACCCTCAAGGACCTACCATTTCAAGGCAAGAAATAGATACAAATACAGGGGTACAAGCTGGAAAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670329.1 |
||
| CDS GCA 90 bp | TCAATCATCAGTGGTGACTGCCGAACTCCTTCCATCATTCTCACATaGTCCACAGCAACCACAAACACTTGTTTAACCTATAGAAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SIISGDCRTPSIILT*STATTNTCLTYRKS Trigger: AGACTTTCTATAGGTTAAACAAGTGTTTGTGGTTGCTGTGGAGCATGTGAGAATGATGGAAGGAGTTCGGCAGTCACCACTGATGATTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668901.1 |
||
| CDS TCA 90 bp | CTTCCTTCTGGTTATAGGGTAGGGCCCTCTGGAATTAGGGTCTTATaGCCTTTACTTTCTTCTACTACTTGGAGAAAGAACAAGGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: LPSGYRVGPSGIRVL*PLLSSTTWRKNKET Trigger: AGTTTCCTTGTTCTTTCTCCAAGTAGTAGAAGAAAGTAAAGGTCATAAGACCCTAATTCCAGAGGGCCCTACCCTATAACCAGAAGGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000655455.1 ENST00000661800.1 ENST00000667570.1 ENST00000669802.1 ENST00000670329.1 |
||
| CDS TCA 90 bp | CATTTCTGCATCCTTATGTCTAGTAGCTATCCAGTAAATATTTTCTaGAACAAGAGCAAGCCTCGGTGGAATTTCCCAGAAAGGGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HFCILMSSSYPVNIF*NKSKPRWNFPERGA Trigger: TGCACCCCTTTCTGGGAAATTCCACCGAGGCTTGCTCTTGTTTCAGAAAATATTTACTGGATAGCTACTAGACATAAGGATGCAGAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000667570.1 ENST00000670742.1 |
||
| CDS TCA 90 bp | CTGGCATCTAGCAGATGCTCACCAGATATCTATAGAAAGTCTTCCTaGGGAGACTCTGGTCTAATTGATTCTTTCTCTATTGCCATATTG | + |
|
Preference number: 5 (lower is better) Translates to: LASSRCSPDIYRKSS*GDSGLIDSFSIAIL Trigger: CAATATGGCAATAGAGAAAGAATCAATTAGACCAGAGTCTCCTCAGGAAGACTTTCTATAGATATCTGGTGAGCATCTGCTAGATGCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000655904.1 ENST00000658014.1 ENST00000658055.1 ENST00000658589.1 ENST00000661800.1 ENST00000661903.1 ENST00000664028.1 ENST00000665392.1 ENST00000667570.1 ENST00000668175.1 ENST00000671554.1 |
||
| CDS TCA 90 bp | CTGCTTGCAAATTACTGGCAAGTGTCACTTCTGTGTATGTTCTCTTaGTGGACACATCAGCACAAAGATATTCTTAGCTCACAGTTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: LLANYWQVSLLCMFS*WTHQHKDILSSQFY Trigger: GTAGAACTGTGAGCTAAGAATATCTTTGTGCTGATGTGTCCATCAAGAGAACATACACAGAAGTGACACTTGCCAGTAATTTGCAAGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668175.1 |
||
| CDS GCA 90 bp | CTTCAGAATGACGACCCAAAGATACAGGGAAAACTTTCCATTTTGTaGTTAGGTTCAACAAAGTATGGACAGCCATGCAGAAATATGACT | + |
|
Preference number: 5 (lower is better) Translates to: LQNDDPKIQGKLSIL*LGSTKYGQPCRNMT Trigger: AGTCATATTTCTGCATGGCTGTCCATACTTTGTTGAACCTAAGCACAAAATGGAAAGTTTTCCCTGTATCTTTGGGTCGTCATTCTGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 23 transcripts: ENST00000652942.1 ENST00000653369.1 ENST00000654009.1 ENST00000655455.1 ENST00000656244.1 ENST00000656434.1 ENST00000657115.1 ENST00000658055.1 ENST00000658589.1 ENST00000658699.1 ENST00000659067.1 ENST00000661800.1 ENST00000661903.1 ENST00000663820.1 ENST00000664028.1 ENST00000664480.1 ENST00000664743.1 ENST00000665392.1 ENST00000667570.1 ENST00000669488.1 ENST00000669802.1 ENST00000670329.1 ENST00000671554.1 |
||
| CDS GCA 90 bp | AAACTTTCCATTTTGTGCTTAGGTTCAACAAAGTATGGACAGCCATaGAGAAATATGACTGGACAAAAGGCAAATGATCGAATGCTAACA | + |
|
Preference number: 5 (lower is better) Translates to: KLSILCLGSTKYGQP*RNMTGQKANDRMLT Trigger: TGTTAGCATTCGATCATTTGCCTTTTGTCCAGTCATATTTCTGCATGGCTGTCCATACTTTGTTGAACCTAAGCACAAAATGGAAAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 23 transcripts: ENST00000652942.1 ENST00000653369.1 ENST00000654009.1 ENST00000655455.1 ENST00000656244.1 ENST00000656434.1 ENST00000657115.1 ENST00000658055.1 ENST00000658589.1 ENST00000658699.1 ENST00000659067.1 ENST00000661800.1 ENST00000661903.1 ENST00000663820.1 ENST00000664028.1 ENST00000664480.1 ENST00000664743.1 ENST00000665392.1 ENST00000667570.1 ENST00000669488.1 ENST00000669802.1 ENST00000670329.1 ENST00000671554.1 |
||
| CDS GCA 90 bp | CAGCATAGCTTTGAACAAGGGCGAGGAATTTTTCTAATTCATTTCTaGATCCTTATGTCTAGTAGCTATCCAGTAAATATTTTCTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QHSFEQGRGIFLIHF*ILMSSSYPVNIFSV Trigger: CACTGAGAAAATATTTACTGGATAGCTACTAGACATAAGGATGCAGAAATGAATTAGAAAAATTCCTCGCCCTTGTTCAAAGCTATGCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 18 transcripts: ENST00000412218.1 ENST00000652942.1 ENST00000654009.1 ENST00000655455.1 ENST00000655904.1 ENST00000656434.1 ENST00000658014.1 ENST00000658055.1 ENST00000658589.1 ENST00000659067.1 ENST00000661800.1 ENST00000661903.1 ENST00000664480.1 ENST00000664743.1 ENST00000665458.1 ENST00000668175.1 ENST00000668901.1 ENST00000669488.1 |
||
| CDS GCA 90 bp | CAGCATAGCTTTGAACAAGGGCGAGGAATTTTTCTAATTCATTTCTaGATCCTTATGTCTAGTAGCTATCCAGTAAATATTTTCTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QHSFEQGRGIFLIHF*ILMSSSYPVNIFWQ Trigger: TTGCCAGAAAATATTTACTGGATAGCTACTAGACATAAGGATGCAGAAATGAATTAGAAAAATTCCTCGCCCTTGTTCAAAGCTATGCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653369.1 |
||
| CDS CCA 72 bp | GCCTCCAGAATTTTCTTTAGCACCTCAGGTCCCTTCTaGGTCAGAGACTGCTGGCTCCAGCACTGGCCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: ASRIFFSTSGPF*VRDCWLQHWPH Trigger: GTGAGGCCAGTGCTGGAGCCAGCAGTCTCTGACCCAGAAGGGACCTGAGGTGCTAAAGAAAATTCTGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000658014.1 ENST00000661903.1 ENST00000664743.1 ENST00000668175.1 ENST00000668901.1 ENST00000671554.1 |
||
| CDS CCA 72 bp | AGCAAGCCTGTTTTCTTTAGCACCTCAGGTCCCTTCTaGGTCAGAGACTGCTGGCTCCAGCACTGGCCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: SKPVFFSTSGPF*VRDCWLQHWPH Trigger: GTGAGGCCAGTGCTGGAGCCAGCAGTCTCTGACCCAGAAGGGACCTGAGGTGCTAAAGAAAACAGGCTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665392.1 |
||
| CDS GCA 72 bp | ATACCAGGGCAACGAGGAGGAACCAGCAGGAAAAGGTaGACTCCCACAGTTGAGGATGATGAGCCTCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: IPGQRGGTSRKR*TPTVEDDEPLW Trigger: CCACAGAGGCTCATCATCCTCAACTGTGGGAGTGCACCTTTTCCTGCTGGTTCCTCCTCGTTGCCCTGGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655904.1 ENST00000665458.1 ENST00000665701.1 ENST00000670742.1 |
||
| CDS GCA 72 bp | CAGCTTCATCCTGCACAGGACCATGCATGCAGGGTGTaGTCAATCATCAGTGGTGACTGCCGAACTCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: QLHPAQDHACRV*SIISGDCRTPS Trigger: GGAAGGAGTTCGGCAGTCACCACTGATGATTGAGCACACCCTGCATGCATGGTCCTGTGCAGGATGAAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668901.1 |
||
| CDS CAA 90 bp | CAGGGCAACGAGGAGGAACCAGCAGGAAAAGGTGCACTCCCACAGTaGAGGATGATGAGCCTCTGTGGGTTTGTGGACACTAAAGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: QGNEEEPAGKGALPQ*RMMSLCGFVDTKDC Trigger: GCAGTCTTTAGTGTCCACAAACCCACAGAGGCTCATCATCCTCAACTGTGGGAGTGCACCTTTTCCTGCTGGTTCCTCCTCGTTGCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655904.1 ENST00000665458.1 ENST00000665701.1 ENST00000670742.1 |
||
| CDS TCA 72 bp | TGCAGCCAGGAGCTTGGGACCAGAGCTGGTTACTGGTaGGGGGTCATCCTTAGCAAAAGTCTACAAGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: CSQELGTRAGYW*GVILSKSLQAG Trigger: TCCAGCTTGTAGACTTTTGCTAAGGATGACCCCTCACCAGTAACCAGCTCTGGTCCCAAGCTCCTGGCTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000655904.1 ENST00000665458.1 ENST00000665701.1 ENST00000670742.1 |
||
| CDS CCA 72 bp | ATCTGTGACATTTTCTTTAGCACCTCAGGTCCCTTCTaGGTCAGAGACTGCTGGCTCCAGCACTGGCCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: ICDIFFSTSGPF*VRDCWLQHWPH Trigger: GTGAGGCCAGTGCTGGAGCCAGCAGTCTCTGACCCAGAAGGGACCTGAGGTGCTAAAGAAAATGTCACAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658589.1 |
||
| CDS CAA 72 bp | GAGGAGGAACCAGCAGGAAAAGGTGCACTCCCACAGTaGAGGATGATGAGCCTCTGTGGGTTTGTGGACACT | + |
|
Preference number: 6 (lower is better) Translates to: EEEPAGKGALPQ*RMMSLCGFVDT Trigger: AGTGTCCACAAACCCACAGAGGCTCATCATCCTCAACTGTGGGAGTGCACCTTTTCCTGCTGGTTCCTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655904.1 ENST00000665458.1 ENST00000665701.1 ENST00000670742.1 |
||
| CDS TCA 72 bp | GGACCATGCATGCAGGGTGTGCTCAATCATCAGTGGTaGCTGCCGAACTCCTTCCATCATTCTCACATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GPCMQGVLNHQW*LPNSFHHSHML Trigger: GAGCATGTGAGAATGATGGAAGGAGTTCGGCAGTCACCACTGATGATTGAGCACACCCTGCATGCATGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668901.1 |
||
| CDS GCA 72 bp | GGGTCTTATGACCTCTGTAGCGAGTCCACATGGAAGTaGCTACCACACAAAGGGCATCTCTGGGAATCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GSYDLCSESTWK*LPHKGHLWESV Trigger: CACTGATTCCCAGAGATGCCCTTTGTGTGGTAGGCACTTCCATGTGGACTCGCTACAGAGGTCATAAGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000652942.1 ENST00000653369.1 ENST00000654009.1 ENST00000656244.1 ENST00000656434.1 ENST00000657115.1 ENST00000658055.1 ENST00000658699.1 ENST00000661903.1 ENST00000664028.1 ENST00000664480.1 ENST00000664743.1 ENST00000665392.1 ENST00000671554.1 |
||
| CDS CAA 90 bp | AGGCAAAGCAAGCCTGCAGACGCTGAATCTGCTGGTGACTTGGTTTaGGACTTCTCAGCCTCCAGAATTTTCTTTAGCACCTCAGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RQSKPADAESAGDLV*DFSASRIFFSTSGP Trigger: GGGACCTGAGGTGCTAAAGAAAATTCTGGAGGCTGAGAAGTCCAAAACCAAGTCACCAGCAGATTCAGCGTCTGCAGGCTTGCTTTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664743.1 |
||
| CDS TCA 72 bp | GTGGGGTCTTTGGGAAGTGAAAACAACTTTGGTATGTaGTCAGGTCATGAGGATGGAGCCCTCACGAACGGG | + |
|
Preference number: 6 (lower is better) Translates to: VGSLGSENNFGM*SGHEDGALTNG Trigger: CCCGTTCGTGAGGGCTCCATCCTCATGACCTGATCACATACCAAAGTTGTTTTCACTTCCCAAAGACCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000658014.1 ENST00000668175.1 ENST00000668901.1 |
||
| CDS GCA 72 bp | CTATGCATGTACCTCTGTAGCGAGTCCACATGGAAGTaGCTACCACACAAAGGGCATCTCTGGGAATCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LCMYLCSESTWK*LPHKGHLWESV Trigger: CACTGATTCCCAGAGATGCCCTTTGTGTGGTAGGCACTTCCATGTGGACTCGCTACAGAGGTACATGCATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655904.1 ENST00000665458.1 ENST00000665701.1 ENST00000670742.1 |
||
| CDS GCA 72 bp | CATGCATGCAGGGTGTGCTCAATCATCAGTGGTGACTaGCGAACTCCTTCCATCATTCTCACATGCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: HACRVCSIISGD*RTPSIILTCST Trigger: TGTGGAGCATGTGAGAATGATGGAAGGAGTTCGGCAGTCACCACTGATGATTGAGCACACCCTGCATGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668901.1 |
||
| CDS CCA 72 bp | TTGGACCTATGCATGTACCTCTGTAGCGAGTCCACATaGAAGTGCCTACCACACAAAGGGCATCTCTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LDLCMYLCSEST*KCLPHKGHLWE Trigger: TTCCCAGAGATGCCCTTTGTGTGGTAGGCACTTCCATGTGGACTCGCTACAGAGGTACATGCATAGGTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655904.1 ENST00000665458.1 ENST00000665701.1 ENST00000670742.1 |
||
| CDS CCA 72 bp | GCTCCATGCCTATTTGAGCAGAGGGAGAACAACATTTaGAGAAATACCAGGGCAACGAGGAGGAACCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: APCLFEQRENNI*RNTRATRRNQQ Trigger: CTGCTGGTTCCTCCTCGTTGCCCTGGTATTTCTCCAAATGTTGTTCTCCCTCTGCTCAAATAGGCATGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655904.1 ENST00000665458.1 ENST00000665701.1 ENST00000670742.1 |
||
| CDS CAA 90 bp | TTTCCAGCTTGTACCCCAGACGCTGAATCTGCTGGTGACTTGGTTTaGGACTTCTCAGCCTCCAGAATTTTCTTTAGCACCTCAGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FPACTPDAESAGDLV*DFSASRIFFSTSGP Trigger: GGGACCTGAGGTGCTAAAGAAAATTCTGGAGGCTGAGAAGTCCAAAACCAAGTCACCAGCAGATTCAGCGTCTGGGGTACAAGCTGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000661903.1 ENST00000671554.1 |
||
| CDS TCA 72 bp | GGTTATAGGGTAGGGCCCTCTGGAATTAGGGTCTTATaGCTTTTCTTTAGCACCTCAGGTCCCTTCTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GYRVGPSGIRVL*LFFSTSGPFWV Trigger: GACCCAGAAGGGACCTGAGGTGCTAAAGAAAAGTCATAAGACCCTAATTCCAGAGGGCCCTACCCTATAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659067.1 |
||
| CDS CCA 72 bp | GAATTAGGGTCTTATGACCTCTGTAGCGAGTCCACATaGAAGTGCCTACCACACAAAGGGCATCTCTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: ELGSYDLCSEST*KCLPHKGHLWE Trigger: TTCCCAGAGATGCCCTTTGTGTGGTAGGCACTTCCATGTGGACTCGCTACAGAGGTCATAAGACCCTAATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000652942.1 ENST00000653369.1 ENST00000654009.1 ENST00000656244.1 ENST00000656434.1 ENST00000657115.1 ENST00000658055.1 ENST00000658699.1 ENST00000661903.1 ENST00000664028.1 ENST00000664480.1 ENST00000664743.1 ENST00000665392.1 ENST00000671554.1 |
||
| CDS CCA 72 bp | TTGTTCAGGAACTCCAAACTCTGTAGCGAGTCCACATaGAAGTGCCTACCACACAAAGGGCATCTCTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LFRNSKLCSEST*KCLPHKGHLWE Trigger: TTCCCAGAGATGCCCTTTGTGTGGTAGGCACTTCCATGTGGACTCGCTACAGAGTTTGGAGTTCCTGAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000655455.1 ENST00000661800.1 ENST00000667570.1 ENST00000669488.1 ENST00000669802.1 ENST00000670329.1 |
||
| CDS CCA 72 bp | ACTTGGCAGGGTAGCTTGGGCAATGCACATGACTCCTaGAAGAGCTTTCAGAGGCAGCCTTGTATTTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: TWQGSLGNAHDS*KSFQRQPCILF Trigger: GAACAAAATACAAGGCTGCCTCTGAAAGCTCTTCCAGGAGTCATGTGCATTGCCCAAGCTACCCTGCCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668175.1 |
||
| CDS CAA 90 bp | AGAAGTGGACCATTACCAGACGCTGAATCTGCTGGTGACTTGGTTTaGGACTTCTCAGCCTCCAGAATTTTCTTTAGCACCTCAGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RSGPLPDAESAGDLV*DFSASRIFFSTSGP Trigger: GGGACCTGAGGTGCTAAAGAAAATTCTGGAGGCTGAGAAGTCCAAAACCAAGTCACCAGCAGATTCAGCGTCTGGTAATGGTCCACTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658014.1 ENST00000668175.1 ENST00000668901.1 |
||
| CDS CAA 90 bp | CGAGCCATCAAGCACCCTGATGTAGAAGCTCATTTCACTCTCAGCTaGTGCAATGAATGTTCCTCCCATCAGGTTGCTGGCTTTCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: RAIKHPDVEAHFTLS*CNECSSHQVAGFLV Trigger: AACCAGAAAGCCAGCAACCTGATGGGAGGAACATTCATTGCACAAGCTGAGAGTGAAATGAGCTTCTACATCAGGGTGCTTGATGGCTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665458.1 |
||
| CDS CAA 90 bp | CTATGGTCACTTGTAAATGAGCTAAAGCAGCTCTGCTTCTGGGCATaGACTGTCTACTGGTTGAGGGTGATGAGGATCACTAGGCCGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LWSLVNELKQLCFWA*TVYWLRVMRITRPH Trigger: ATGCGGCCTAGTGATCCTCATCACCCTCAACCAGTAGACAGTCAATGCCCAGAAGCAGAGCTGCTTTAGCTCATTTACAAGTGACCATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668175.1 |
||
| CDS TCA 72 bp | CCAACCCTGGCATCTAGCAGATGCTCACCAGATATATaGATATTCTACATCTTCCAACACAGCGGGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PTLASSRCSPDI*IFYIFQHSGLS Trigger: GGAGAGCCCGCTGTGTTGGAAGATGTAGAATATTCATATATCTGGTGAGCATCTGCTAGATGCCAGGGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000654009.1 ENST00000655455.1 ENST00000656434.1 ENST00000657115.1 ENST00000659067.1 ENST00000663820.1 ENST00000664480.1 ENST00000665458.1 ENST00000665701.1 ENST00000668901.1 ENST00000669802.1 ENST00000670329.1 ENST00000670742.1 |
||
| CDS CCA 72 bp | TGGTCACTTGTAAATGAGCTAAAGCAGCTCTGCTTCTaGGCATTGACTGTCTACTGGTTGAGGGTGATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: WSLVNELKQLCF*ALTVYWLRVMR Trigger: CCTCATCACCCTCAACCAGTAGACAGTCAATGCCCAGAAGCAGAGCTGCTTTAGCTCATTTACAAGTGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668175.1 |
||
| CDS CAA 72 bp | AAGCCTGCAGACGCTGAATCTGCTGGTGACTTGGTTTaGGACTTCTCAGCCTCCAGAATTTTCTTTAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: KPADAESAGDLV*DFSASRIFFST Trigger: GGTGCTAAAGAAAATTCTGGAGGCTGAGAAGTCCAAAACCAAGTCACCAGCAGATTCAGCGTCTGCAGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664743.1 |
||
| CDS CAA 72 bp | AAGCACCCTGATGTAGAAGCTCATTTCACTCTCAGCTaGTGCAATGAATGTTCCTCCCATCAGGTTGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: KHPDVEAHFTLS*CNECSSHQVAG Trigger: GCCAGCAACCTGATGGGAGGAACATTCATTGCACAAGCTGAGAGTGAAATGAGCTTCTACATCAGGGTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665458.1 |
||
| CDS CAA 72 bp | TGTACCCCAGACGCTGAATCTGCTGGTGACTTGGTTTaGGACTTCTCAGCCTCCAGAATTTTCTTTAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: CTPDAESAGDLV*DFSASRIFFST Trigger: GGTGCTAAAGAAAATTCTGGAGGCTGAGAAGTCCAAAACCAAGTCACCAGCAGATTCAGCGTCTGGGGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000661903.1 ENST00000671554.1 |
||
| CDS CAA 90 bp | CTCATTTCACTCTCAGCTTGTGCAATGAATGTTCCTCCCATCAGGTaGCTGGCTTTCTGGTTATCTTCAGCCCAGAATGTATGCCTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LISLSACAMNVPPIR*LAFWLSSAQNVCLQ Trigger: TTGCAGGCATACATTCTGGGCTGAAGATAACCAGAAAGCCAGCAACCTGATGGGAGGAACATTCATTGCACAAGCTGAGAGTGAAATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658589.1 |
||
| CDS TCA 72 bp | AAGGGCTGTGTGTGCAGAGCGATAAGAGATCAAAGCTaGGTAGATTCCTCGGCTGCGTGCTTAGTTGTAATT | + |
|
Preference number: 6 (lower is better) Translates to: KGCVCRAIRDQS*VDSSAACLVVI Trigger: AATTACAACTAAGCACGCAGCCGAGGAATCTACTCAGCTTTGATCTCTTATCGCTCTGCACACACAGCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000412218.1 ENST00000652942.1 ENST00000654009.1 ENST00000655455.1 ENST00000655904.1 ENST00000656434.1 ENST00000658014.1 ENST00000658055.1 ENST00000658589.1 ENST00000659067.1 ENST00000661800.1 ENST00000661903.1 ENST00000664480.1 ENST00000664743.1 ENST00000665458.1 ENST00000668175.1 ENST00000668901.1 ENST00000669488.1 |
||
| CDS TCA 72 bp | GGTTATAGGGTAGGGCCCTCTGGAATTAGGGTCTTATaGCCTGATGTAGAAGCTCATTTCACTCTCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GYRVGPSGIRVL*PDVEAHFTLSL Trigger: CAAGCTGAGAGTGAAATGAGCTTCTACATCAGGTCATAAGACCCTAATTCCAGAGGGCCCTACCCTATAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658589.1 |
||
| CDS CCA 72 bp | GATGATAGTCTAGCACTTTGTTCTTTGGTTGGAGGATaGCTGGACATCATACTTTCTGATCTGCCCCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: DDSLALCSLVGG*LDIILSDLPLL Trigger: GAGCAGGGGCAGATCAGAAAGTATGATGTCCAGCCATCCTCCAACCAAAGAACAAAGTGCTAGACTATCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655904.1 ENST00000665458.1 ENST00000665701.1 ENST00000670742.1 |
||
| CDS CAA 72 bp | CCATTACCAGACGCTGAATCTGCTGGTGACTTGGTTTaGGACTTCTCAGCCTCCAGAATTTTCTTTAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: PLPDAESAGDLV*DFSASRIFFST Trigger: GGTGCTAAAGAAAATTCTGGAGGCTGAGAAGTCCAAAACCAAGTCACCAGCAGATTCAGCGTCTGGTAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658014.1 ENST00000668175.1 ENST00000668901.1 |
||
| CDS CAA 72 bp | ATTTGGAGGTGGGGTCTTTGGGAAGTGAAAACAACTTaGGTATGTGATCAGGTCATGAGGATGGAGCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: IWRWGLWEVKTT*VCDQVMRMEPS Trigger: TGAGGGCTCCATCCTCATGACCTGATCACATACCAAAGTTGTTTTCACTTCCCAAAGACCCCACCTCCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000658014.1 ENST00000668175.1 ENST00000668901.1 |
||
| CDS CAA 72 bp | CAAAGCAAGCCTGCAGACGCTGAATCTGCTGGTGACTaGGTTTTGGACTTCTCAGCCTCCAGAATTTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: QSKPADAESAGD*VLDFSASRIFF Trigger: AAAGAAAATTCTGGAGGCTGAGAAGTCCAAAACCAAGTCACCAGCAGATTCAGCGTCTGCAGGCTTGCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664743.1 |
||
| CDS CAA 72 bp | CTTGTAAATGAGCTAAAGCAGCTCTGCTTCTGGGCATaGACTGTCTACTGGTTGAGGGTGATGAGGATCACT | + |
|
Preference number: 6 (lower is better) Translates to: LVNELKQLCFWA*TVYWLRVMRIT Trigger: AGTGATCCTCATCACCCTCAACCAGTAGACAGTCAATGCCCAGAAGCAGAGCTGCTTTAGCTCATTTACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668175.1 |
||
| CDS CAA 90 bp | CTCGGCTGCGTGCTTAGTTGTAATTCTGCAGAACCTCCAGTTCAGTaGTCCCTTGGTTGCTCTTTAATTGGAGAGATAATTACGCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LGCVLSCNSAEPPVQ*SLGCSLIGEIITLL Trigger: AAGCAGCGTAATTATCTCTCCAATTAAAGAGCAACCAAGGGACAACTGAACTGGAGGTTCTGCAGAATTACAACTAAGCACGCAGCCGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412218.1 |
||
| CDS CAA 90 bp | CTCGGCTGCGTGCTTAGTTGTAATTCTGCAGAACCTCCAGTTCAGTaGTCCCTTGGTTGCTCTTTAATTGGAGAGATAATTACGAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LGCVLSCNSAEPPVQ*SLGCSLIGEIITKE Trigger: CTCCTTCGTAATTATCTCTCCAATTAAAGAGCAACCAAGGGACAACTGAACTGGAGGTTCTGCAGAATTACAACTAAGCACGCAGCCGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654009.1 |
||
| CDS TCA 72 bp | TCATACTTTCTGATCTGCCCCTGCTCCATGCCTATTTaGGCAGAGGGAGAACAACATTTGGAGAAATACCAG | + |
|
Preference number: 6 (lower is better) Translates to: SYFLICPCSMPI*AEGEQHLEKYQ Trigger: CTGGTATTTCTCCAAATGTTGTTCTCCCTCTGCTCAAATAGGCATGGAGCAGGGGCAGATCAGAAAGTATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655904.1 ENST00000665458.1 ENST00000665701.1 ENST00000670742.1 |
||
| CDS GCA 72 bp | AGCGATAAGAGATCAAAGCTGAGTAGATTCCTCGGCTaGGTGCTTAGTTGTAATTCTGCAGAACCTCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SDKRSKLSRFLG*VLSCNSAEPPV Trigger: AACTGGAGGTTCTGCAGAATTACAACTAAGCACGCAGCCGAGGAATCTACTCAGCTTTGATCTCTTATCGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000412218.1 ENST00000652942.1 ENST00000654009.1 ENST00000655455.1 ENST00000655904.1 ENST00000656434.1 ENST00000658014.1 ENST00000658055.1 ENST00000658589.1 ENST00000659067.1 ENST00000661800.1 ENST00000661903.1 ENST00000664480.1 ENST00000664743.1 ENST00000665458.1 ENST00000668175.1 ENST00000668901.1 ENST00000669488.1 |
||
| CDS GCA 72 bp | AGTGGTGACTGCCGAACTCCTTCCATCATTCTCACATaGTCCACAGCAACCACAAACACTTGTTTAACCTAT | + |
|
Preference number: 6 (lower is better) Translates to: SGDCRTPSIILT*STATTNTCLTY Trigger: ATAGGTTAAACAAGTGTTTGTGGTTGCTGTGGAGCATGTGAGAATGATGGAAGGAGTTCGGCAGTCACCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668901.1 |
||
| CDS CCA 72 bp | GTGGACCATTACCAGACGCTGAATCTGCTGGTGACTTaGTTTTGGACTTCTCAGCCTCCAGAATTTTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: VDHYQTLNLLVT*FWTSQPPEFSL Trigger: TAAAGAAAATTCTGGAGGCTGAGAAGTCCAAAACCAAGTCACCAGCAGATTCAGCGTCTGGTAATGGTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000658014.1 ENST00000668175.1 ENST00000668901.1 |
||
| CDS CCA 72 bp | AAAGCAAGCCTGCAGACGCTGAATCTGCTGGTGACTTaGTTTTGGACTTCTCAGCCTCCAGAATTTTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: KASLQTLNLLVT*FWTSQPPEFSL Trigger: TAAAGAAAATTCTGGAGGCTGAGAAGTCCAAAACCAAGTCACCAGCAGATTCAGCGTCTGCAGGCTTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664743.1 |
||
| CDS CCA 72 bp | AGTTCTTCTTGTCTTGGCTGGCCTCACTCTTGTCTATaGTCACTTGTAAATGAGCTAAAGCAGCTCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSSCLGWPHSCL*SLVNELKQLCF Trigger: GAAGCAGAGCTGCTTTAGCTCATTTACAAGTGACCATAGACAAGAGTGAGGCCAGCCAAGACAAGAAGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668175.1 |
||
| CDS CAA 72 bp | GCACAAAGATATTCCTTTCAGAGGCAGCCTTGTATTTaGTTCCAATTCTCTGGCCCTGTTTCCTCGCTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: AQRYSFQRQPCI*FQFSGPVSSLV Trigger: AACGAGCGAGGAAACAGGGCCAGAGAATTGGAACAAAATACAAGGCTGCCTCTGAAAGGAATATCTTTGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000652942.1 ENST00000654009.1 ENST00000655455.1 ENST00000655904.1 ENST00000656244.1 ENST00000656434.1 ENST00000658055.1 ENST00000658589.1 ENST00000658699.1 ENST00000661903.1 ENST00000663820.1 ENST00000664028.1 ENST00000664480.1 ENST00000664743.1 ENST00000665392.1 ENST00000665458.1 ENST00000665701.1 ENST00000667570.1 ENST00000669488.1 ENST00000669802.1 ENST00000670742.1 |
||
| CDS CAA 72 bp | CTGCTTGCAAATTACTTTCAGAGGCAGCCTTGTATTTaGTTCCAATTCTCTGGCCCTGTTTCCTCGCTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: LLANYFQRQPCI*FQFSGPVSSLV Trigger: AACGAGCGAGGAAACAGGGCCAGAGAATTGGAACAAAATACAAGGCTGCCTCTGAAAGTAATTTGCAAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658014.1 |
||
| CDS CAA 72 bp | AGTGGACCATTACCAGACGCTGAATCTGCTGGTGACTaGGTTTTGGACTTCTCAGCCTCCAGAATTTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SGPLPDAESAGD*VLDFSASRIFF Trigger: AAAGAAAATTCTGGAGGCTGAGAAGTCCAAAACCAAGTCACCAGCAGATTCAGCGTCTGGTAATGGTCCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000658014.1 ENST00000668175.1 ENST00000668901.1 |
||
| CDS CAA 90 bp | CTCATTTCACTCTCAGCTTGTGCAATGAATGTTCCTCCCATCAGGTaGCTGGCTTTCTGGTTATCTTCAGCCCAGAATGTATGCTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LISLSACAMNVPPIR*LAFWLSSAQNVCFS Trigger: AGAAAAGCATACATTCTGGGCTGAAGATAACCAGAAAGCCAGCAACCTGATGGGAGGAACATTCATTGCACAAGCTGAGAGTGAAATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412218.1 ENST00000665458.1 |
||
| CDS CAA 90 bp | CTCGGCTGCGTGCTTAGTTGTAATTCTGCAGAACCTCCAGTTCAGTaGTCCCTTGGTTGCTCTTTAATTGGAGAGATAATTACGCTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: LGCVLSCNSAEPPVQ*SLGCSLIGEIITLY Trigger: ATACAGCGTAATTATCTCTCCAATTAAAGAGCAACCAAGGGACAACTGAACTGGAGGTTCTGCAGAATTACAACTAAGCACGCAGCCGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000655455.1 ENST00000655904.1 ENST00000656434.1 ENST00000658014.1 ENST00000658055.1 ENST00000658589.1 ENST00000659067.1 ENST00000661800.1 ENST00000661903.1 ENST00000665458.1 ENST00000668175.1 ENST00000668901.1 |
||
| CDS CAA 90 bp | CTCGGCTGCGTGCTTAGTTGTAATTCTGCAGAACCTCCAGTTCAGTaGTCCCTTGGTTGCTCTTTAATTGGAGAGATAATTACGCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LGCVLSCNSAEPPVQ*SLGCSLIGEIITLK Trigger: TTTCAGCGTAATTATCTCTCCAATTAAAGAGCAACCAAGGGACAACTGAACTGGAGGTTCTGCAGAATTACAACTAAGCACGCAGCCGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664480.1 |
||
| CDS CCA 72 bp | TCTGAACTGGGCTTAAATGGTCAGTTCTTCTTGTCTTaGCTGGCCTCACTCTTGTCTATGGTCACTTGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: SELGLNGQFFLS*LASLLSMVTCK Trigger: TTTACAAGTGACCATAGACAAGAGTGAGGCCAGCCAAGACAAGAAGAACTGACCATTTAAGCCCAGTTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668175.1 |
||
| CDS CAA 72 bp | CACATCAGCACAAAGATATTCCTTTCAGAGGCAGCCTaGTATTTTGTTCCAATTCTCTGGCCCTGTTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: HISTKIFLSEAA*YFVPILWPCFL Trigger: GAGGAAACAGGGCCAGAGAATTGGAACAAAATACAAGGCTGCCTCTGAAAGGAATATCTTTGTGCTGATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 27 transcripts: ENST00000412218.1 ENST00000652942.1 ENST00000653369.1 ENST00000654009.1 ENST00000655455.1 ENST00000655904.1 ENST00000656244.1 ENST00000656434.1 ENST00000658055.1 ENST00000658589.1 ENST00000658699.1 ENST00000659067.1 ENST00000661800.1 ENST00000661903.1 ENST00000663820.1 ENST00000664028.1 ENST00000664480.1 ENST00000664743.1 ENST00000665392.1 ENST00000665458.1 ENST00000665701.1 ENST00000667570.1 ENST00000668901.1 ENST00000669488.1 ENST00000669802.1 ENST00000670742.1 ENST00000671554.1 |
||
| CDS CAA 72 bp | GTTCCATCTGCTTGCAAATTACTTTCAGAGGCAGCCTaGTATTTTGTTCCAATTCTCTGGCCCTGTTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VPSACKLLSEAA*YFVPILWPCFL Trigger: GAGGAAACAGGGCCAGAGAATTGGAACAAAATACAAGGCTGCCTCTGAAAGTAATTTGCAAGCAGATGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658014.1 ENST00000670329.1 |
||
| CDS CAA 72 bp | ATCATACTTTCTGATCTGCCCCTGCTCCATGCCTATTaGAGCAGAGGGAGAACAACATTTGGAGAAATACCA | + |
|
Preference number: 6 (lower is better) Translates to: IILSDLPLLHAY*SRGRTTFGEIP Trigger: TGGTATTTCTCCAAATGTTGTTCTCCCTCTGCTCAAATAGGCATGGAGCAGGGGCAGATCAGAAAGTATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655904.1 ENST00000665458.1 ENST00000665701.1 ENST00000670742.1 |
||
| CDS CAA 90 bp | TCTGCTTGCAAATTACTGGCAAGTGTCACTTCTGTGTATGTTCTCTaGATGGACACATCAGCACAAAGATATTCCTTTCAGAGGCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SACKLLASVTSVYVL*MDTSAQRYSFQRQP Trigger: AGGCTGCCTCTGAAAGGAATATCTTTGTGCTGATGTGTCCATCAAGAGAACATACACAGAAGTGACACTTGCCAGTAATTTGCAAGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 27 transcripts: ENST00000412218.1 ENST00000652942.1 ENST00000654009.1 ENST00000655455.1 ENST00000655904.1 ENST00000656244.1 ENST00000656434.1 ENST00000657115.1 ENST00000658055.1 ENST00000658589.1 ENST00000658699.1 ENST00000659067.1 ENST00000661800.1 ENST00000661903.1 ENST00000663820.1 ENST00000664028.1 ENST00000664480.1 ENST00000664743.1 ENST00000665392.1 ENST00000665458.1 ENST00000665701.1 ENST00000667570.1 ENST00000668901.1 ENST00000669488.1 ENST00000669802.1 ENST00000670742.1 ENST00000671554.1 |
||
| CDS TCA 72 bp | ACAGCCATGCAGAAATATGACTGGACAAAAGGCAAATaGTCGAATGCTAACAGAGTGGAGAAATCCAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: TAMQKYDWTKGK*SNANRVEKSSK Trigger: CTTGCTGGATTTCTCCACTCTGTTAGCATTCGATCATTTGCCTTTTGTCCAGTCATATTTCTGCATGGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 23 transcripts: ENST00000652942.1 ENST00000653369.1 ENST00000654009.1 ENST00000655455.1 ENST00000656244.1 ENST00000656434.1 ENST00000657115.1 ENST00000658055.1 ENST00000658589.1 ENST00000658699.1 ENST00000659067.1 ENST00000661800.1 ENST00000661903.1 ENST00000663820.1 ENST00000664028.1 ENST00000664480.1 ENST00000664743.1 ENST00000665392.1 ENST00000667570.1 ENST00000669488.1 ENST00000669802.1 ENST00000670329.1 ENST00000671554.1 |
||
| CDS TCA 72 bp | TTGATCACCTTAGCTAGAGGAAGAGAAAGTCATCACTaGGTAGTTAGTGCTCCAATTCTGTGCCATGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LITLARGRESHH*VVSAPILCHEA Trigger: TGCTTCATGGCACAGAATTGGAGCACTAACTACTCAGTGATGACTTTCTCTTCCTCTAGCTAAGGTGATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000655455.1 ENST00000661800.1 ENST00000667570.1 ENST00000669802.1 ENST00000670329.1 |
||
| CDS TCA 72 bp | CTTATGACCTTAGCTAGAGGAAGAGAAAGTCATCACTaGGTAGTTAGTGCTCCAATTCTGTGCCATGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LMTLARGRESHH*VVSAPILCHEA Trigger: TGCTTCATGGCACAGAATTGGAGCACTAACTACTCAGTGATGACTTTCTCTTCCTCTAGCTAAGGTCATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669488.1 |
||
| CDS TCA 72 bp | AGCTTGTACCCCTGTATTTGTATCTATTTCTTGCCTTaGAATGGTAGGTCCTTGAGGGTTCATGCTTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLYPCICIYFLP*NGRSLRVHACF Trigger: GAAGCAAGCATGAACCCTCAAGGACCTACCATTTCAAGGCAAGAAATAGATACAAATACAGGGGTACAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670329.1 |
||
| CDS TCA 72 bp | GATATTCTTAGCTCACAGTTCTACAGGCTGTTGATCTaGACTGGGCTTAAATGGTCAGTTCTTCTTGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: DILSSQFYRLLI*TGLKWSVLLVL Trigger: CAAGACAAGAAGAACTGACCATTTAAGCCCAGTTCAGATCAACAGCCTGTAGAACTGTGAGCTAAGAATATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668175.1 |
||
| CDS TCA 72 bp | ACAAAGATATTCTTAGCTCACAGTTCTACAGGCTGTTaGTCTGAACTGGGCTTAAATGGTCAGTTCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TKIFLAHSSTGC*SELGLNGQFFL Trigger: CAAGAAGAACTGACCATTTAAGCCCAGTTCAGATCAACAGCCTGTAGAACTGTGAGCTAAGAATATCTTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668175.1 |
||
| CDS CAA 72 bp | GTGCTTAGTTGTAATTCTGCAGAACCTCCAGTTCAGTaGTCCCTTGGTTGCTCTTTAATTGGAGAGATAATT | + |
|
Preference number: 6 (lower is better) Translates to: VLSCNSAEPPVQ*SLGCSLIGEII Trigger: AATTATCTCTCCAATTAAAGAGCAACCAAGGGACAACTGAACTGGAGGTTCTGCAGAATTACAACTAAGCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000412218.1 ENST00000652942.1 ENST00000654009.1 ENST00000655455.1 ENST00000655904.1 ENST00000656434.1 ENST00000658014.1 ENST00000658055.1 ENST00000658589.1 ENST00000659067.1 ENST00000661800.1 ENST00000661903.1 ENST00000664480.1 ENST00000664743.1 ENST00000665458.1 ENST00000668175.1 ENST00000668901.1 ENST00000669488.1 |
||
| CDS TCA 72 bp | AATTACTGGCAAGTGTCACTTCTGTGTATGTTCTCTTaGTGGACACATCAGCACAAAGATATTCCTTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: NYWQVSLLCMFS*WTHQHKDIPFR Trigger: TCTGAAAGGAATATCTTTGTGCTGATGTGTCCATCAAGAGAACATACACAGAAGTGACACTTGCCAGTAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 27 transcripts: ENST00000412218.1 ENST00000652942.1 ENST00000654009.1 ENST00000655455.1 ENST00000655904.1 ENST00000656244.1 ENST00000656434.1 ENST00000657115.1 ENST00000658055.1 ENST00000658589.1 ENST00000658699.1 ENST00000659067.1 ENST00000661800.1 ENST00000661903.1 ENST00000663820.1 ENST00000664028.1 ENST00000664480.1 ENST00000664743.1 ENST00000665392.1 ENST00000665458.1 ENST00000665701.1 ENST00000667570.1 ENST00000668901.1 ENST00000669488.1 ENST00000669802.1 ENST00000670742.1 ENST00000671554.1 |
||
| CDS TCA 72 bp | AATTACTGGCAAGTGTCACTTCTGTGTATGTTCTCTTaGTGGACACATCAGCACAAAGATATTCTTAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: NYWQVSLLCMFS*WTHQHKDILSS Trigger: TGAGCTAAGAATATCTTTGTGCTGATGTGTCCATCAAGAGAACATACACAGAAGTGACACTTGCCAGTAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668175.1 |
||
| CDS CAA 72 bp | AAATTACTGGCAAGTGTCACTTCTGTGTATGTTCTCTaGATGGACACATCAGCACAAAGATATTCCTTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: KLLASVTSVYVL*MDTSAQRYSFQ Trigger: CTGAAAGGAATATCTTTGTGCTGATGTGTCCATCAAGAGAACATACACAGAAGTGACACTTGCCAGTAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 27 transcripts: ENST00000412218.1 ENST00000652942.1 ENST00000654009.1 ENST00000655455.1 ENST00000655904.1 ENST00000656244.1 ENST00000656434.1 ENST00000657115.1 ENST00000658055.1 ENST00000658589.1 ENST00000658699.1 ENST00000659067.1 ENST00000661800.1 ENST00000661903.1 ENST00000663820.1 ENST00000664028.1 ENST00000664480.1 ENST00000664743.1 ENST00000665392.1 ENST00000665458.1 ENST00000665701.1 ENST00000667570.1 ENST00000668901.1 ENST00000669488.1 ENST00000669802.1 ENST00000670742.1 ENST00000671554.1 |
||
| CDS CAA 72 bp | TTCTTCTACTACTTGGAGAAAGAACAAGGAAACTTGTaGATCACCTTAGCTAGAGGAAGAGAAAGTCATCAC | + |
|
Preference number: 6 (lower is better) Translates to: FFYYLEKEQGNL*ITLARGRESHH Trigger: GTGATGACTTTCTCTTCCTCTAGCTAAGGTGATCAACAAGTTTCCTTGTTCTTTCTCCAAGTAGTAGAAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000655455.1 ENST00000661800.1 ENST00000667570.1 ENST00000669802.1 ENST00000670329.1 |
||
| CDS TCA 72 bp | GCTAAAACCCCCAAACCTTCATTCTATATAAGTAGATaGATGACTGGAGGAAGAGATGGAATTCTAGGATAT | + |
|
Preference number: 6 (lower is better) Translates to: AKTPKPSFYISR*MTGGRDGILGY Trigger: ATATCCTAGAATTCCATCTCTTCCTCCAGTCATTCATCTACTTATATAGAATGAAGGTTTGGGGGTTTTAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665701.1 |
||
| CDS CAA 72 bp | ACTTTCTTCTACTACTTGGAGAAAGAACAAGGAAACTaGTTGATCACCTTAGCTAGAGGAAGAGAAAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: TFFYYLEKEQGN*LITLARGRESH Trigger: ATGACTTTCTCTTCCTCTAGCTAAGGTGATCAACAAGTTTCCTTGTTCTTTCTCCAAGTAGTAGAAGAAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000655455.1 ENST00000661800.1 ENST00000667570.1 ENST00000669802.1 ENST00000670329.1 |
||