Pregenerated sensors for LINC01640 (Homo sapiens)
Ensembl gene IDs: ENSG00000231253Ensembl transcript IDs: ENST00000452505.1, ENST00000653890.1, ENST00000659583.1, ENST00000670696.1
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTGGCCATTCCCACCGCTGCACCAGTGTCACGCACAAGCTTCTTGTaGGGTGGCTGCAGTATCCCCAGAACTCATATCCACACACAGCAA | + |
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Preference number: 5 (lower is better) Translates to: LAIPTAAPVSRTSFL*GGCSIPRTHIHTQQ Trigger: TTGCTGTGTGTGGATATGAGTTCTGGGGATACTGCAGCCACCTCACAAGAAGCTTGTGCGTGACACTGGTGCAGCGGTGGGAATGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000452505.1 ENST00000653890.1 |
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| CDS TCA 90 bp | AACTCAGGCGCAACGGGATGTTTCTTACAAGGAGCAGCCGTGCAGTaGTTGCTCCACTCTGAGGGTCTGACTCAGCCCTTCCTCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: NSGATGCFLQGAAVQ*LLHSEGLTQPFLSF Trigger: GAAGCTGAGGAAGGGCTGAGTCAGACCCTCAGAGTGGAGCAATCACTGCACGGCTGCTCCTTGTAAGAAACATCCCGTTGCGCCTGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653890.1 |
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| CDS GCA 90 bp | GCTTTATCCAGTGGTCTCTGTGATGCTCCTGGCCATTCCCACCGCTaGACCAGTGTCACGCACAAGCTTCTTGTGAGGTGGCTGCAGTAT | + |
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Preference number: 5 (lower is better) Translates to: ALSSGLCDAPGHSHR*TSVTHKLLVRWLQY Trigger: ATACTGCAGCCACCTCACAAGAAGCTTGTGCGTGACACTGGTGCAGCGGTGGGAATGGCCAGGAGCATCACAGAGACCACTGGATAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452505.1 ENST00000653890.1 |
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| CDS GCA 90 bp | CCATTGTCACTCGCATGTACCCCATCTCTCCAATGCAGCATTTCTTaGTGCCCTGGGCCACAAGGTCCCCTCCATAGGCCTCTATCAGCA | + |
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Preference number: 5 (lower is better) Translates to: PLSLACTPSLQCSIS*CPGPQGPLHRPLSA Trigger: TGCTGATAGAGGCCTATGGAGGGGACCTTGTGGCCCAGGGCAGCAAGAAATGCTGCATTGGAGAGATGGGGTACATGCGAGTGACAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653890.1 |
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| CDS GCA 90 bp | TACCAACTCTTCCCATTGTCACTCGCATGTACCCCATCTCTCCAATaGAGCATTTCTTGCTGCCCTGGGCCACAAGGTCCCCTCCATAGG | + |
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Preference number: 5 (lower is better) Translates to: YQLFPLSLACTPSLQ*SISCCPGPQGPLHR Trigger: CCTATGGAGGGGACCTTGTGGCCCAGGGCAGCAAGAAATGCTGCATTGGAGAGATGGGGTACATGCGAGTGACAATGGGAAGAGTTGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653890.1 |
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| CDS CCA 90 bp | CCAGTCGCCATCGACCTGCTGCAGTCAGAGCTCAGTTCTAGAGACTaGAAGTCCACGATGGAGGTGTCAGTAGGTTTGGTTTCTCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: PVAIDLLQSELSSRD*KSTMEVSVGLVSPE Trigger: CTCAGGAGAAACCAAACCTACTGACACCTCCATCGTGGACTTCCAGTCTCTAGAACTGAGCTCTGACTGCAGCAGGTCGATGGCGACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659583.1 |
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| CDS TCA 90 bp | ATGTATGCCACCCCTTTTATACTGGCACAGAACGTTTCCAAGCTGTaGAGCATCGTGCCATCTCCAGGAAGAGGAGCCTGCTCCCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: MYATPFILAQNVSKL*SIVPSPGRGACSQP Trigger: AGGCTGGGAGCAGGCTCCTCTTCCTGGAGATGGCACGATGCTTCACAGCTTGGAAACGTTCTGTGCCAGTATAAAAGGGGTGGCATACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653890.1 |
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| CDS GCA 90 bp | TTGTCACTCGCATGTACCCCATCTCTCCAATGCAGCATTTCTTGCTaGCCTGGGCCACAAGGTCCCCTCCATAGGCCTCTATCAGCATTT | + |
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Preference number: 5 (lower is better) Translates to: LSLACTPSLQCSISC*PGPQGPLHRPLSAF Trigger: AAATGCTGATAGAGGCCTATGGAGGGGACCTTGTGGCCCAGGGCAGCAAGAAATGCTGCATTGGAGAGATGGGGTACATGCGAGTGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653890.1 |
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| CDS CCA 90 bp | CATTCCCACCGCTGCACCAGTGTCACGCACAAGCTTCTTGTGAGGTaGCTGCAGTATCCCCAGAACTCATATCCACACACAGCAATGTCA | + |
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Preference number: 5 (lower is better) Translates to: HSHRCTSVTHKLLVR*LQYPQNSYPHTAMS Trigger: TGACATTGCTGTGTGTGGATATGAGTTCTGGGGATACTGCAGCCACCTCACAAGAAGCTTGTGCGTGACACTGGTGCAGCGGTGGGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000452505.1 ENST00000653890.1 |
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| CDS CCA 90 bp | ATCAGGCTTTCCTGCTCCGAGGGATGTATGCCACCCCTTTTATACTaGCACAGAACGTTTCCAAGCTGTGAAGCATCGTGCCATCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: IRLSCSEGCMPPLLY*HRTFPSCEASCHLQ Trigger: CTGGAGATGGCACGATGCTTCACAGCTTGGAAACGTTCTGTGCCAGTATAAAAGGGGTGGCATACATCCCTCGGAGCAGGAAAGCCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653890.1 |
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| CDS GCA 90 bp | TCTTCTGGGGGCCTGGGGTGTGCTGGAGGTCCAGCAACTTCTACATaGTCAATGACTGCCGTTATTAAGACAGGTATGACCACTATCCTT | + |
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Preference number: 5 (lower is better) Translates to: SSGGLGCAGGPATST*SMTAVIKTGMTTIL Trigger: AAGGATAGTGGTCATACCTGTCTTAATAACGGCAGTCATTGAGCATGTAGAAGTTGCTGGACCTCCAGCACACCCCAGGCCCCCAGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000653890.1 ENST00000670696.1 |
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| CDS CCA 90 bp | TGGTATACACGAGGGTGGTGCAGGAGAATGAAGAACACACTCCAGTaGCCAGGTCAGAATGATTCTGATGGTTGTACAGAGCTTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: WYTRGWCRRMKNTLQ*PGQNDSDGCTELPG Trigger: TCCAGGAAGCTCTGTACAACCATCAGAATCATTCTGACCTGGCCACTGGAGTGTGTTCTTCATTCTCCTGCACCACCCTCGTGTATACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653890.1 ENST00000659583.1 ENST00000670696.1 |
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| CDS CCA 90 bp | TCCCCAGAACTCATATCCACACACAGCAATGTCAGAGGATCAAACTaGCTCCTGCTGATGCTTTCTCCAGAGAGAGAGGACAATATCTGG | + |
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Preference number: 5 (lower is better) Translates to: SPELISTHSNVRGSN*LLLMLSPEREDNIW Trigger: CCAGATATTGTCCTCTCTCTCTGGAGAAAGCATCAGCAGGAGCCAGTTTGATCCTCTGACATTGCTGTGTGTGGATATGAGTTCTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452505.1 |
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| CDS TCA 90 bp | AGACTTCCTGGGTTTGAATCCAGAACCTTCAAATTACTGGCCAGGTaGCCTTTGAAATGTGACCTCCTCTCCCCAAGCCTCAGTTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: RLPGFESRTFKLLAR*PLKCDLLSPSLSFL Trigger: GAGAAAACTGAGGCTTGGGGAGAGGAGGTCACATTTCAAAGGTCACCTGGCCAGTAATTTGAAGGTTCTGGATTCAAACCCAGGAAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000452505.1 |
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| CDS TCA 90 bp | AGACTGGAAGTCCACGATGGAGGTGTCAGTAGGTTTGGTTTCTCCTaGGGCCTCTCTTTATGTCTTACAGATGGTCACTTTCATGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: RLEVHDGGVSRFGFS*GLSLCLTDGHFHAV Trigger: CACAGCATGAAAGTGACCATCTGTAAGACATAAAGAGAGGCCTCAGGAGAAACCAAACCTACTGACACCTCCATCGTGGACTTCCAGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659583.1 |
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| CDS CCA 90 bp | TCCCCAGAACTCATATCCACACACAGCAATGTCAGAGGATCAAACTaGCTCCTGCTGATGCTTTCTCCAGAGAGAGAGGACAATATCCTA | + |
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Preference number: 5 (lower is better) Translates to: SPELISTHSNVRGSN*LLLMLSPEREDNIL Trigger: TAGGATATTGTCCTCTCTCTCTGGAGAAAGCATCAGCAGGAGCCAGTTTGATCCTCTGACATTGCTGTGTGTGGATATGAGTTCTGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653890.1 |
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| CDS TCA 90 bp | TCATATCCACACACAGCAATGTCAGAGGATCAAACTGGCTCCTGCTaGTGCTTTCTCCAGAGAGAGAGGACAATATCTGGCTTGTTAGAT | + |
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Preference number: 5 (lower is better) Translates to: SYPHTAMSEDQTGSC*CFLQRERTISGLLD Trigger: ATCTAACAAGCCAGATATTGTCCTCTCTCTCTGGAGAAAGCATCAGCAGGAGCCAGTTTGATCCTCTGACATTGCTGTGTGTGGATATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452505.1 |
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| CDS GCA 72 bp | AGTGGTCTCTGTGATGCTCCTGGCCATTCCCACCGCTaGACCAGTGTCACGCACAAGCTTCTTGTGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: SGLCDAPGHSHR*TSVTHKLLVRW Trigger: CCACCTCACAAGAAGCTTGTGCGTGACACTGGTGCAGCGGTGGGAATGGCCAGGAGCATCACAGAGACCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452505.1 ENST00000653890.1 |
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| CDS TCA 72 bp | CCCACCGCTGCACCAGTGTCACGCACAAGCTTCTTGTaGGGTGGCTGCAGTATCCCCAGAACTCATATCCAC | + |
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Preference number: 6 (lower is better) Translates to: PTAAPVSRTSFL*GGCSIPRTHIH Trigger: GTGGATATGAGTTCTGGGGATACTGCAGCCACCTCACAAGAAGCTTGTGCGTGACACTGGTGCAGCGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000452505.1 ENST00000653890.1 |
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| CDS TCA 72 bp | GCAACGGGATGTTTCTTACAAGGAGCAGCCGTGCAGTaGTTGCTCCACTCTGAGGGTCTGACTCAGCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: ATGCFLQGAAVQ*LLHSEGLTQPF Trigger: GAAGGGCTGAGTCAGACCCTCAGAGTGGAGCAATCACTGCACGGCTGCTCCTTGTAAGAAACATCCCGTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653890.1 |
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| CDS CCA 72 bp | CGCTGCACCAGTGTCACGCACAAGCTTCTTGTGAGGTaGCTGCAGTATCCCCAGAACTCATATCCACACACA | + |
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Preference number: 6 (lower is better) Translates to: RCTSVTHKLLVR*LQYPQNSYPHT Trigger: TGTGTGTGGATATGAGTTCTGGGGATACTGCAGCCACCTCACAAGAAGCTTGTGCGTGACACTGGTGCAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000452505.1 ENST00000653890.1 |
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| CDS TCA 72 bp | ACCCCTTTTATACTGGCACAGAACGTTTCCAAGCTGTaGAGCATCGTGCCATCTCCAGGAAGAGGAGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: TPFILAQNVSKL*SIVPSPGRGAC Trigger: GCAGGCTCCTCTTCCTGGAGATGGCACGATGCTTCACAGCTTGGAAACGTTCTGTGCCAGTATAAAAGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653890.1 |
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| CDS CCA 72 bp | TCCTGCTCCGAGGGATGTATGCCACCCCTTTTATACTaGCACAGAACGTTTCCAAGCTGTGAAGCATCGTGC | + |
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Preference number: 6 (lower is better) Translates to: SCSEGCMPPLLY*HRTFPSCEASC Trigger: GCACGATGCTTCACAGCTTGGAAACGTTCTGTGCCAGTATAAAAGGGGTGGCATACATCCCTCGGAGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653890.1 |
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| CDS CCA 72 bp | ATCGACCTGCTGCAGTCAGAGCTCAGTTCTAGAGACTaGAAGTCCACGATGGAGGTGTCAGTAGGTTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: IDLLQSELSSRD*KSTMEVSVGLV Trigger: AACCAAACCTACTGACACCTCCATCGTGGACTTCCAGTCTCTAGAACTGAGCTCTGACTGCAGCAGGTCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659583.1 |
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| CDS CAA 72 bp | CTGAAACTTGCTCATGGCTGTCCTTGGTCTCCTTGTTaGTCCCTGACCTGGATACCATTCCTCATGAGACCC | + |
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Preference number: 6 (lower is better) Translates to: LKLAHGCPWSPC*SLTWIPFLMRP Trigger: GGGTCTCATGAGGAATGGTATCCAGGTCAGGGACAAACAAGGAGACCAAGGACAGCCATGAGCAAGTTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653890.1 ENST00000659583.1 ENST00000670696.1 |
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| CDS CAA 90 bp | CTCAGCTGTGTGATGGAACTTCCTGAAACTTGCTCATGGCTGTCCTaGGTCTCCTTGTTTGTCCCTGACCTGGATACCATTCCTCATGAG | + |
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Preference number: 6 (lower is better) Translates to: LSCVMELPETCSWLS*VSLFVPDLDTIPHE Trigger: CTCATGAGGAATGGTATCCAGGTCAGGGACAAACAAGGAGACCAAGGACAGCCATGAGCAAGTTTCAGGAAGTTCCATCACACAGCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653890.1 ENST00000659583.1 ENST00000670696.1 |
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| CDS TCA 72 bp | GGGTTTGAATCCAGAACCTTCAAATTACTGGCCAGGTaGCCTTTGAAATGTGACCTCCTCTCCCCAAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: GFESRTFKLLAR*PLKCDLLSPSL Trigger: GAGGCTTGGGGAGAGGAGGTCACATTTCAAAGGTCACCTGGCCAGTAATTTGAAGGTTCTGGATTCAAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452505.1 |
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| CDS TCA 72 bp | CACACAGCAATGTCAGAGGATCAAACTGGCTCCTGCTaGTGCTTTCTCCAGAGAGAGAGGACAATATCTGGC | + |
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Preference number: 6 (lower is better) Translates to: HTAMSEDQTGSC*CFLQRERTISG Trigger: GCCAGATATTGTCCTCTCTCTCTGGAGAAAGCATCAGCAGGAGCCAGTTTGATCCTCTGACATTGCTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452505.1 |
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| CDS CCA 72 bp | CTCATATCCACACACAGCAATGTCAGAGGATCAAACTaGCTCCTGCTGATGCTTTCTCCAGAGAGAGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: LISTHSNVRGSN*LLLMLSPERED Trigger: GTCCTCTCTCTCTGGAGAAAGCATCAGCAGGAGCCAGTTTGATCCTCTGACATTGCTGTGTGTGGATATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452505.1 ENST00000653890.1 |
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| CDS TCA 72 bp | AACCTTCAAATTACTGGCCAGGTGACCTTTGAAATGTaGCCTCCTCTCCCCAAGCCTCAGTTTTCTCCTAGG | + |
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Preference number: 6 (lower is better) Translates to: NLQITGQVTFEM*PPLPKPQFSPR Trigger: CCTAGGAGAAAACTGAGGCTTGGGGAGAGGAGGTCACATTTCAAAGGTCACCTGGCCAGTAATTTGAAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000452505.1 |
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| CDS CAA 72 bp | AGAGACTGGAAGTCCACGATGGAGGTGTCAGTAGGTTaGGTTTCTCCTGAGGCCTCTCTTTATGTCTTACAG | + |
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Preference number: 6 (lower is better) Translates to: RDWKSTMEVSVG*VSPEASLYVLQ Trigger: CTGTAAGACATAAAGAGAGGCCTCAGGAGAAACCAAACCTACTGACACCTCCATCGTGGACTTCCAGTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659583.1 |
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| CDS CAA 90 bp | CTCAGTTCTAGAGACTGGAAGTCCACGATGGAGGTGTCAGTAGGTTaGGTTTCTCCTGAGGCCTCTCTTTATGTCTTACAGATGGTCACT | + |
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Preference number: 6 (lower is better) Translates to: LSSRDWKSTMEVSVG*VSPEASLYVLQMVT Trigger: AGTGACCATCTGTAAGACATAAAGAGAGGCCTCAGGAGAAACCAAACCTACTGACACCTCCATCGTGGACTTCCAGTCTCTAGAACTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659583.1 |
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| CDS TCA 72 bp | AATCCAGAACCTTCAAATTACTGGCCAGGTGACCTTTaGAATGTGACCTCCTCTCCCCAAGCCTCAGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: NPEPSNYWPGDL*NVTSSPQASVF Trigger: GAAAACTGAGGCTTGGGGAGAGGAGGTCACATTTCAAAGGTCACCTGGCCAGTAATTTGAAGGTTCTGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000452505.1 |
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| CDS TCA 72 bp | GTCCACGATGGAGGTGTCAGTAGGTTTGGTTTCTCCTaGGGCCTCTCTTTATGTCTTACAGATGGTCACTTT | + |
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Preference number: 6 (lower is better) Translates to: VHDGGVSRFGFS*GLSLCLTDGHF Trigger: AAAGTGACCATCTGTAAGACATAAAGAGAGGCCTCAGGAGAAACCAAACCTACTGACACCTCCATCGTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659583.1 |
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