Pregenerated sensors for LINC01638 (Homo sapiens)
Ensembl gene IDs: ENSG00000233521Ensembl transcript IDs: ENST00000418271.1, ENST00000444114.5, ENST00000650737.1, ENST00000659538.1, ENST00000660027.1
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACTGGGGCTGAAGGCTCCACTTCCCAGGTGGCTCTCAAACATGCTTaGCAAGTTAGTGCTGGCTGTTGGCAGGAGGCCTCAGTTTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: TGAEGSTSQVALKHA*QVSAGCWQEASVSL Trigger: GAGAGAAACTGAGGCCTCCTGCCAACAGCCAGCACTAACTTGGCAAGCATGTTTGAGAGCCACCTGGGAAGTGGAGCCTTCAGCCCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000418271.1 ENST00000650737.1 ENST00000659538.1 ENST00000660027.1 |
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| CDS TCA 90 bp | GCTCAGGTGTGCATTCAAGCAGGCCAGCCTCAAAGGCAACAGTGCTaGTGTATTCCAGAGGGAATGCTGGAGACAGGGGAGGCATGGGAT | + |
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Preference number: 5 (lower is better) Translates to: AQVCIQAGQPQRQQC*CIPEGMLETGEAWD Trigger: ATCCCATGCCTCCCCTGTCTCCAGCATTCCCTCTGGAATACATCAGCACTGTTGCCTTTGAGGCTGGCCTGCTTGAATGCACACCTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000418271.1 ENST00000444114.5 ENST00000660027.1 |
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| CDS GCA 90 bp | GGCAGGAGGCCTCAGTTTCTCTCCATACATACATCTCCAAAAAGTTaGTTGAGCACCCTCATGACATGGCATCTGGCTTCCTCCACTGTG | + |
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Preference number: 5 (lower is better) Translates to: GRRPQFLSIHTSPKS*LSTLMTWHLASSTV Trigger: CACAGTGGAGGAAGCCAGATGCCATGTCATGAGGGTGCTCAAGCAACTTTTTGGAGATGTATGTATGGAGAGAAACTGAGGCCTCCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000418271.1 ENST00000650737.1 ENST00000659538.1 ENST00000660027.1 |
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| CDS TCA 90 bp | GCTCAGGTGTGCATTCAAGCAGGCCAGCCTCAAAGGCAACAGTGCTaGTGTATTCCAGAGGGAATGCTGCAAGGAACATACAGAGACATT | + |
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Preference number: 5 (lower is better) Translates to: AQVCIQAGQPQRQQC*CIPEGMLQGTYRDI Trigger: AATGTCTCTGTATGTTCCTTGCAGCATTCCCTCTGGAATACATCAGCACTGTTGCCTTTGAGGCTGGCCTGCTTGAATGCACACCTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650737.1 |
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| CDS CCA 90 bp | TCCATACATACATCTCCAAAAAGTTGCTTGAGCACCCTCATGACATaGCATCTGGCTTCCTCCACTGTGAATCCGGAGCTCAGGTGTGCA | + |
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Preference number: 5 (lower is better) Translates to: SIHTSPKSCLSTLMT*HLASSTVNPELRCA Trigger: TGCACACCTGAGCTCCGGATTCACAGTGGAGGAAGCCAGATGCCATGTCATGAGGGTGCTCAAGCAACTTTTTGGAGATGTATGTATGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418271.1 |
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| CDS CCA 90 bp | TCCCAGGTGGCTCTCAAACATGCTTGCCAAGTTAGTGCTGGCTGTTaGCAGGAGGCCTCAGTTTCTCTCCATACATACATCTCCAAAAAG | + |
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Preference number: 5 (lower is better) Translates to: SQVALKHACQVSAGC*QEASVSLHTYISKK Trigger: CTTTTTGGAGATGTATGTATGGAGAGAAACTGAGGCCTCCTGCCAACAGCCAGCACTAACTTGGCAAGCATGTTTGAGAGCCACCTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000418271.1 ENST00000650737.1 ENST00000659538.1 ENST00000660027.1 |
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| CDS CCA 90 bp | TCCATACATACATCTCCAAAAAGTTGCTTGAGCACCCTCATGACATaGCATCTGGCTTCCTCCACTGTGAATCATCCAAGAAATTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: SIHTSPKSCLSTLMT*HLASSTVNHPRNCC Trigger: ACAGCAATTTCTTGGATGATTCACAGTGGAGGAAGCCAGATGCCATGTCATGAGGGTGCTCAAGCAACTTTTTGGAGATGTATGTATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000650737.1 ENST00000659538.1 ENST00000660027.1 |
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| CDS TCA 72 bp | ATCTTGCCACTGCACCACTCCAGCCTGGCGATAGAGTaGGACTCTGTGAATCCGGAGCTCAGGTGTGCATTC | + |
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Preference number: 6 (lower is better) Translates to: ILPLHHSSLAIE*DSVNPELRCAF Trigger: GAATGCACACCTGAGCTCCGGATTCACAGAGTCTCACTCTATCGCCAGGCTGGAGTGGTGCAGTGGCAAGAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444114.5 |
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| CDS GCA 72 bp | CTCAAAGGCAACAGTGCTGATGTATTCCAGAGGGAATaGTGGAGACAGGGGAGGCATGGGATGGAGGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: LKGNSADVFQRE*WRQGRHGMEEV Trigger: CACCTCCTCCATCCCATGCCTCCCCTGTCTCCAGCATTCCCTCTGGAATACATCAGCACTGTTGCCTTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000418271.1 ENST00000444114.5 ENST00000660027.1 |
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| CDS TCA 72 bp | TGCATTCAAGCAGGCCAGCCTCAAAGGCAACAGTGCTaGTGTATTCCAGAGGGAATGCTGGAGACAGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: CIQAGQPQRQQC*CIPEGMLETGE Trigger: CTCCCCTGTCTCCAGCATTCCCTCTGGAATACATCAGCACTGTTGCCTTTGAGGCTGGCCTGCTTGAATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000418271.1 ENST00000444114.5 ENST00000660027.1 |
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| CDS CAA 72 bp | CATCTGCATGGCTCTGGCTTAGGAGCTCTTGTGAAGTaGCAGTCCAGATGGTGGCCAGGACTGCAGTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: HLHGSGLGALVK*QSRWWPGLQSH Trigger: ATGAGACTGCAGTCCTGGCCACCATCTGGACTGCAACTTCACAAGAGCTCCTAAGCCAGAGCCATGCAGATG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000418271.1 ENST00000650737.1 ENST00000659538.1 ENST00000660027.1 |
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| CDS CAA 90 bp | CCAAGAATCCATCTGCATGGCTCTGGCTTAGGAGCTCTTGTGAAGTaGCAGTCCAGATGGTGGCCAGGACTGCAGTCTCATCTGAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: PRIHLHGSGLGALVK*QSRWWPGLQSHLKA Trigger: AGCCTTCAGATGAGACTGCAGTCCTGGCCACCATCTGGACTGCAACTTCACAAGAGCTCCTAAGCCAGAGCCATGCAGATGGATTCTTGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000418271.1 ENST00000650737.1 ENST00000659538.1 ENST00000660027.1 |
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| CDS CCA 72 bp | GTGGCACAATTTCTGGGGGCCAAGAATCCATCTGCATaGCTCTGGCTTAGGAGCTCTTGTGAAGTTGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: VAQFLGAKNPSA*LWLRSSCEVAV Trigger: GACTGCAACTTCACAAGAGCTCCTAAGCCAGAGCCATGCAGATGGATTCTTGGCCCCCAGAAATTGTGCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000418271.1 ENST00000650737.1 ENST00000659538.1 ENST00000660027.1 |
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| CDS CCA 72 bp | ACATCTCCAAAAAGTTGCTTGAGCACCCTCATGACATaGCATCTGGCTTCCTCCACTGTGAATCCGGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: TSPKSCLSTLMT*HLASSTVNPEL Trigger: GAGCTCCGGATTCACAGTGGAGGAAGCCAGATGCCATGTCATGAGGGTGCTCAAGCAACTTTTTGGAGATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418271.1 |
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| CDS CAA 90 bp | TGGCAGGAGGCCTCAGTTTCTCTCCATACATACATCTCCAAAAAGTaGCTTGAGCACCCTCATGACATGGCATCTGGCTTCCTCCACTGT | + |
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Preference number: 6 (lower is better) Translates to: WQEASVSLHTYISKK*LEHPHDMASGFLHC Trigger: ACAGTGGAGGAAGCCAGATGCCATGTCATGAGGGTGCTCAAGCAACTTTTTGGAGATGTATGTATGGAGAGAAACTGAGGCCTCCTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000418271.1 ENST00000650737.1 ENST00000659538.1 ENST00000660027.1 |
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| CDS TCA 72 bp | TGCATTCAAGCAGGCCAGCCTCAAAGGCAACAGTGCTaGTGTATTCCAGAGGGAATGCTGCAAGGAACATAC | + |
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Preference number: 6 (lower is better) Translates to: CIQAGQPQRQQC*CIPEGMLQGTY Trigger: GTATGTTCCTTGCAGCATTCCCTCTGGAATACATCAGCACTGTTGCCTTTGAGGCTGGCCTGCTTGAATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650737.1 |
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| CDS CAA 90 bp | AGGAGGCCTCAGTTTCTCTCCATACATACATCTCCAAAAAGTTGCTaGAGCACCCTCATGACATGGCATCTGGCTTCCTCCACTGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: RRPQFLSIHTSPKSC*STLMTWHLASSTVN Trigger: ATTCACAGTGGAGGAAGCCAGATGCCATGTCATGAGGGTGCTCAAGCAACTTTTTGGAGATGTATGTATGGAGAGAAACTGAGGCCTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000418271.1 ENST00000650737.1 ENST00000659538.1 ENST00000660027.1 |
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| CDS GCA 72 bp | CCTCAGTTTCTCTCCATACATACATCTCCAAAAAGTTaGTTGAGCACCCTCATGACATGGCATCTGGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: PQFLSIHTSPKS*LSTLMTWHLAS Trigger: GGAAGCCAGATGCCATGTCATGAGGGTGCTCAAGCAACTTTTTGGAGATGTATGTATGGAGAGAAACTGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000418271.1 ENST00000650737.1 ENST00000659538.1 ENST00000660027.1 |
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| CDS CCA 72 bp | ACATCTCCAAAAAGTTGCTTGAGCACCCTCATGACATaGCATCTGGCTTCCTCCACTGTGAATCATCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: TSPKSCLSTLMT*HLASSTVNHPR Trigger: TCTTGGATGATTCACAGTGGAGGAAGCCAGATGCCATGTCATGAGGGTGCTCAAGCAACTTTTTGGAGATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000650737.1 ENST00000659538.1 ENST00000660027.1 |
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| CDS CAA 72 bp | CAGTTTCTCTCCATACATACATCTCCAAAAAGTTGCTaGAGCACCCTCATGACATGGCATCTGGCTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: QFLSIHTSPKSC*STLMTWHLASS Trigger: GGAGGAAGCCAGATGCCATGTCATGAGGGTGCTCAAGCAACTTTTTGGAGATGTATGTATGGAGAGAAACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000418271.1 ENST00000650737.1 ENST00000659538.1 ENST00000660027.1 |
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| CDS CAA 72 bp | GCCTCAGTTTCTCTCCATACATACATCTCCAAAAAGTaGCTTGAGCACCCTCATGACATGGCATCTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: ASVSLHTYISKK*LEHPHDMASGF Trigger: GAAGCCAGATGCCATGTCATGAGGGTGCTCAAGCAACTTTTTGGAGATGTATGTATGGAGAGAAACTGAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000418271.1 ENST00000650737.1 ENST00000659538.1 ENST00000660027.1 |
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| CDS CCA 72 bp | TCCAGAGGGAATGCTGCAAGGAACATACAGAGACATTaGGGTGAAAATGCTTCTGAAGGGAAAATAGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SRGNAARNIQRH*GENASEGKIGG Trigger: TCCACCTATTTTCCCTTCAGAAGCATTTTCACCCCAATGTCTCTGTATGTTCCTTGCAGCATTCCCTCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650737.1 |
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