Pregenerated sensors for LINC01637 (Homo sapiens)
Ensembl gene IDs: ENSG00000237476Ensembl transcript IDs: ENST00000444039.1
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GACGCGGAGAGCGCCGGTCAGGAAGCCCGGACTGAGCGCGGGGGCTaGGATCTGGGATCCAAACGCCGTGGCCGCGGGCCCGCGCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: DAESAGQEARTERGG*DLGSKRRGRGPAPG Trigger: CCCGGGCGCGGGCCCGCGGCCACGGCGTTTGGATCCCAGATCCCAGCCCCCGCGCTCAGTCCGGGCTTCCTGACCGGCGCTCTCCGCGTC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000444039.1 |
||
| CDS TCA 90 bp | GCGCGCGAGAAGGGACGCGGAGAGCGCCGGTCAGGAAGCCCGGACTaGGCGCGGGGGCTGGGATCTGGGATCCAAACGCCGTGGCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AREKGRGERRSGSPD*ARGLGSGIQTPWPR Trigger: CCGCGGCCACGGCGTTTGGATCCCAGATCCCAGCCCCCGCGCTCAGTCCGGGCTTCCTGACCGGCGCTCTCCGCGTCCCTTCTCGCGCGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000444039.1 |
||
| CDS TCA 90 bp | CGGGCGGGGACCGAAGGTGCAGCTCGGCCTGGCGATGCGGGGACATaGGTAAAGGTCTGGAGGACACGGAGCTGGCCAGGGTCCGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RAGTEGAARPGDAGT*VKVWRTRSWPGSGL Trigger: CAACCCGGACCCTGGCCAGCTCCGTGTCCTCCAGACCTTTACTCATGTCCCCGCATCGCCAGGCCGAGCTGCACCTTCGGTCCCCGCCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444039.1 |
||
| CDS GCA 90 bp | GGCCTTGCTCTCCTCTCCTCGGCTGCCGCGGGCGGGGACCGAAGGTaGAGCTCGGCCTGGCGATGCGGGGACATGAGTAAAGGTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GLALLSSAAAGGDRR*SSAWRCGDMSKGLE Trigger: CTCCAGACCTTTACTCATGTCCCCGCATCGCCAGGCCGAGCTGCACCTTCGGTCCCCGCCCGCGGCAGCCGAGGAGAGGAGAGCAAGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444039.1 |
||
| CDS CCA 72 bp | GTCAGGAAGCCCGGACTGAGCGCGGGGGCTGGGATCTaGGATCCAAACGCCGTGGCCGCGGGCCCGCGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: VRKPGLSAGAGI*DPNAVAAGPRP Trigger: CGGGCGCGGGCCCGCGGCCACGGCGTTTGGATCCCAGATCCCAGCCCCCGCGCTCAGTCCGGGCTTCCTGAC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000444039.1 |
||
| CDS GCA 72 bp | AGGTCTGGAGGACACGGAGCTGGCCAGGGTCCGGGTTaGACGCCCCGCGGCCACACCGGAGTCCACGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RSGGHGAGQGPG*TPRGHTGVHAA Trigger: TGCAGCGTGGACTCCGGTGTGGCCGCGGGGCGTGCAACCCGGACCCTGGCCAGCTCCGTGTCCTCCAGACCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444039.1 |
||
| CDS CAA 72 bp | AAGGTCTGGAGGACACGGAGCTGGCCAGGGTCCGGGTaGCACGCCCCGCGGCCACACCGGAGTCCACGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KVWRTRSWPGSG*HAPRPHRSPRC Trigger: GCAGCGTGGACTCCGGTGTGGCCGCGGGGCGTGCAACCCGGACCCTGGCCAGCTCCGTGTCCTCCAGACCTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444039.1 |
||
| CDS CAA 72 bp | CACAGAGGCTGTGTGGGTTCCTCCCCGGTCTGGGCCTaGCTCTCCTCTCCTCGGCTGCCGCGGGCGGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: HRGCVGSSPVWA*LSSPRLPRAGT Trigger: GGTCCCCGCCCGCGGCAGCCGAGGAGAGGAGAGCAAGGCCCAGACCGGGGAGGAACCCACACAGCCTCTGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444039.1 |
||
| CDS TCA 72 bp | AAGGGACGCGGAGAGCGCCGGTCAGGAAGCCCGGACTaGGCGCGGGGGCTGGGATCTGGGATCCAAACGCCG | + |
|
Preference number: 6 (lower is better) Translates to: KGRGERRSGSPD*ARGLGSGIQTP Trigger: CGGCGTTTGGATCCCAGATCCCAGCCCCCGCGCTCAGTCCGGGCTTCCTGACCGGCGCTCTCCGCGTCCCTT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000444039.1 |
||
| CDS CCA 72 bp | CTGGAGCACAGAGGCTGTGTGGGTTCCTCCCCGGTCTaGGCCTTGCTCTCCTCTCCTCGGCTGCCGCGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LEHRGCVGSSPV*ALLSSPRLPRA Trigger: CGCCCGCGGCAGCCGAGGAGAGGAGAGCAAGGCCCAGACCGGGGAGGAACCCACACAGCCTCTGTGCTCCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444039.1 |
||
| CDS GCA 72 bp | CTCCTCTCCTCGGCTGCCGCGGGCGGGGACCGAAGGTaGAGCTCGGCCTGGCGATGCGGGGACATGAGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: LLSSAAAGGDRR*SSAWRCGDMSK Trigger: TTTACTCATGTCCCCGCATCGCCAGGCCGAGCTGCACCTTCGGTCCCCGCCCGCGGCAGCCGAGGAGAGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444039.1 |
||
| CDS CCA 72 bp | GCTGCCGCGGGCGGGGACCGAAGGTGCAGCTCGGCCTaGCGATGCGGGGACATGAGTAAAGGTCTGGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: AAAGGDRRCSSA*RCGDMSKGLED Trigger: GTCCTCCAGACCTTTACTCATGTCCCCGCATCGCCAGGCCGAGCTGCACCTTCGGTCCCCGCCCGCGGCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444039.1 |
||
| CDS TCA 72 bp | ACCGAAGGTGCAGCTCGGCCTGGCGATGCGGGGACATaGGTAAAGGTCTGGAGGACACGGAGCTGGCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TEGAARPGDAGT*VKVWRTRSWPG Trigger: CCCTGGCCAGCTCCGTGTCCTCCAGACCTTTACTCATGTCCCCGCATCGCCAGGCCGAGCTGCACCTTCGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444039.1 |
||