Pregenerated sensors for LINC01634 (Homo sapiens)
Ensembl gene IDs: ENSG00000235295Ensembl transcript IDs: ENST00000443243.1
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTCATGTTTCAGAGGGAGAGAGCAGCCGGTGATGCAACTGCTGAGTaGCGTCCCAAGGTAACAGAGAGGAGACGGGCTGTGAGCTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: FMFQRERAAGDATAE*RPKVTERRRAVSCP Trigger: AGGGCAGCTCACAGCCCGTCTCCTCTCTGTTACCTTGGGACGTCACTCAGCAGTTGCATCACCGGCTGCTCTCTCCCTCTGAAACATGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS GCA 90 bp | GAGACACACAGAAGTGGACACCAAAGGGTGCACAAAAGCTATTCCTaGATCCCAGGCCAGCCAAGGGACAGCCCTCCCATAGAGAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: ETHRSGHQRVHKSYS*IPGQPRDSPPIERR Trigger: CCTTCTCTCTATGGGAGGGCTGTCCCTTGGCTGGCCTGGGATGCAGGAATAGCTTTTGTGCACCCTTTGGTGTCCACTTCTGTGTGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS GCA 90 bp | AAGCAGTGCCACCAAGAGAGACACACAGAAGTGGACACCAAAGGGTaGACAAAAGCTATTCCTGCATCCCAGGCCAGCCAAGGGACAGCC | + |
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Preference number: 5 (lower is better) Translates to: KQCHQERHTEVDTKG*TKAIPASQASQGTA Trigger: GGCTGTCCCTTGGCTGGCCTGGGATGCAGGAATAGCTTTTGTGCACCCTTTGGTGTCCACTTCTGTGTGTCTCTCTTGGTGGCACTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS GCA 90 bp | ACCAGAGCAGGGAGTGCCCATAGTGTTGGCCAATCAGACGAGGACTaGAGAACAGGAGAAATGGGAACTGTGGTCCTGAAAACCTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: TRAGSAHSVGQSDED*RTGEMGTVVLKTCA Trigger: AGCACAGGTTTTCAGGACCACAGTTCCCATTTCTCCTGTTCTGCAGTCCTCGTCTGATTGGCCAACACTATGGGCACTCCCTGCTCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS GCA 90 bp | GGCAAAATAGACAGGAGACTGGAGGCTGGCATAGAGATAGAATGCTaGCCAGAGTCTCTAGTTTTTACATCTGGGTGGGTGGTGGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: GKIDRRLEAGIEIEC*PESLVFTSGWVVGH Trigger: ATGGCCCACCACCCACCCAGATGTAAAAACTAGAGACTCTGGGCAGCATTCTATCTCTATGCCAGCCTCCAGTCTCCTGTCTATTTTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS TCA 90 bp | TTCTGTCCCCCGCCACCAGCTCTCCTACCCAAGATAACCACTTCTTaGGTATTCTCAAAGACGGTCTATGCCTTTCCAAGTCCACGTACA | + |
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Preference number: 5 (lower is better) Translates to: FCPPPPALLPKITTS*VFSKTVYAFPSPRT Trigger: TGTACGTGGACTTGGAAAGGCATAGACCGTCTTTGAGAATACTCAAGAAGTGGTTATCTTGGGTAGGAGAGCTGGTGGCGGGGGACAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS TCA 90 bp | AATCAGACGAGGACTGCAGAACAGGAGAAATGGGAACTGTGGTCCTaGAAACCTGTGCTTTCTCGGCCCGATGAAATGCAGAGTTATGTG | + |
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Preference number: 5 (lower is better) Translates to: NQTRTAEQEKWELWS*KPVLSRPDEMQSYV Trigger: CACATAACTCTGCATTTCATCGGGCCGAGAAAGCACAGGTTTTCAGGACCACAGTTCCCATTTCTCCTGTTCTGCAGTCCTCGTCTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS TCA 90 bp | GGCCCAAGCAAGGAGATGATGATGGCTTGTACCAGATCGGTGATGTaGAGTTCAAGAAAAGTGGGCAAATTAGAGATGTATCTTGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: GPSKEMMMACTRSVM*SSRKVGKLEMYLGG Trigger: GCCTCCAAGATACATCTCTAATTTGCCCACTTTTCTTGAACTTCACATCACCGATCTGGTACAAGCCATCATCATCTCCTTGCTTGGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS TCA 90 bp | ATGCCTTTCCAAGTCCACGTACATATGTATGCACACGTGCCTGTTTaGCGTTTTCCAGCAGAAGTGGTAGCGTATCATACACACTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: MPFQVHVHMYAHVPV*RFPAEVVAYHTHCS Trigger: AGAACAGTGTGTATGATACGCTACCACTTCTGCTGGAAAACGTCAAACAGGCACGTGTGCATACATATGTACGTGGACTTGGAAAGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS GCA 90 bp | CTAGAAAAGTTGCTGCCGAAAAGTCATGCCTTGACCTGGACTTCATaGCTTTGTCTCATAAGTACAGCGATTTGTCACTCCATACTGGAC | + |
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Preference number: 5 (lower is better) Translates to: LEKLLPKSHALTWTS*LCLISTAICHSILD Trigger: GTCCAGTATGGAGTGACAAATCGCTGTACTTATGAGACAAAGGCATGAAGTCCAGGTCAAGGCATGACTTTTCGGCAGCAACTTTTCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS GCA 90 bp | CCTACCCAAGATAACCACTTCTTGAGTATTCTCAAAGACGGTCTATaGCTTTCCAAGTCCACGTACATATGTATGCACACGTGCCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: PTQDNHFLSILKDGL*LSKSTYICMHTCLF Trigger: AAACAGGCACGTGTGCATACATATGTACGTGGACTTGGAAAGGCATAGACCGTCTTTGAGAATACTCAAGAAGTGGTTATCTTGGGTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS TCA 90 bp | GAAATGGGAACTGTGGTCCTGAAAACCTGTGCTTTCTCGGCCCGATaGAATGCAGAGTTATGTGATAGCATGCTTCTGACTTTCAATATT | + |
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Preference number: 5 (lower is better) Translates to: EMGTVVLKTCAFSAR*NAELCDSMLLTFNI Trigger: AATATTGAAAGTCAGAAGCATGCTATCACATAACTCTGCATTTCATCGGGCCGAGAAAGCACAGGTTTTCAGGACCACAGTTCCCATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS TCA 90 bp | CTTTCTCGGCCCGATGAAATGCAGAGTTATGTGATAGCATGCTTCTaGCTTTCAATATTCTCTTCTTCATTGGCAGCCATTCCTATACAT | + |
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Preference number: 5 (lower is better) Translates to: LSRPDEMQSYVIACF*LSIFSSSLAAIPIH Trigger: ATGTATAGGAATGGCTGCCAATGAAGAAGAGAATATTGAAAGTCAGAAGCATGCTATCACATAACTCTGCATTTCATCGGGCCGAGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS TCA 72 bp | CAGAGGGAGAGAGCAGCCGGTGATGCAACTGCTGAGTaGCGTCCCAAGGTAACAGAGAGGAGACGGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: QRERAAGDATAE*RPKVTERRRAV Trigger: CACAGCCCGTCTCCTCTCTGTTACCTTGGGACGTCACTCAGCAGTTGCATCACCGGCTGCTCTCTCCCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS CCA 72 bp | TTCAGAAGACTCCAGGCTAGACATGCTCAACTGCAGTaGCCCCTCATCCTGCTGAGCAGTGCCCAAGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: FRRLQARHAQLQ*PLILLSSAQGL Trigger: CAGGCCTTGGGCACTGCTCAGCAGGATGAGGGGCCACTGCAGTTGAGCATGTCTAGCCTGGAGTCTTCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS TCA 72 bp | TCCCAGCACTGTTTCTGTCTCTGGGAGTCAGGCAGGTaGCTTCCCCTCTGTGGGTCTCCTCACCTGATGAGT | + |
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Preference number: 6 (lower is better) Translates to: SQHCFCLWESGR*LPLCGSPHLMS Trigger: ACTCATCAGGTGAGGAGACCCACAGAGGGGAAGTCACCTGCCTGACTCCCAGAGACAGAAACAGTGCTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS GCA 72 bp | AGAAGTGGACACCAAAGGGTGCACAAAAGCTATTCCTaGATCCCAGGCCAGCCAAGGGACAGCCCTCCCATA | + |
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Preference number: 6 (lower is better) Translates to: RSGHQRVHKSYS*IPGQPRDSPPI Trigger: TATGGGAGGGCTGTCCCTTGGCTGGCCTGGGATGCAGGAATAGCTTTTGTGCACCCTTTGGTGTCCACTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS TCA 72 bp | AGGACTGCAGAACAGGAGAAATGGGAACTGTGGTCCTaGAAACCTGTGCTTTCTCGGCCCGATGAAATGCAG | + |
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Preference number: 6 (lower is better) Translates to: RTAEQEKWELWS*KPVLSRPDEMQ Trigger: CTGCATTTCATCGGGCCGAGAAAGCACAGGTTTTCAGGACCACAGTTCCCATTTCTCCTGTTCTGCAGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS GCA 72 bp | GACAGGAGACTGGAGGCTGGCATAGAGATAGAATGCTaGCCAGAGTCTCTAGTTTTTACATCTGGGTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: DRRLEAGIEIEC*PESLVFTSGWV Trigger: CACCCACCCAGATGTAAAAACTAGAGACTCTGGGCAGCATTCTATCTCTATGCCAGCCTCCAGTCTCCTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS CCA 72 bp | AGTACAGCGATTTGTCACTCCATACTGGACAGAGCTTaGGGGGAAACCGAGGTCTTCTCTGTGGAATGTGAG | + |
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Preference number: 6 (lower is better) Translates to: STAICHSILDRA*GETEVFSVECE Trigger: CTCACATTCCACAGAGAAGACCTCGGTTTCCCCCCAAGCTCTGTCCAGTATGGAGTGACAAATCGCTGTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS CAA 90 bp | TTTCTGTCCCCCGCCACCAGCTCTCCTACCCAAGATAACCACTTCTaGAGTATTCTCAAAGACGGTCTATGCCTTTCCAAGTCCACGTAC | + |
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Preference number: 6 (lower is better) Translates to: FLSPATSSPTQDNHF*SILKDGLCLSKSTY Trigger: GTACGTGGACTTGGAAAGGCATAGACCGTCTTTGAGAATACTCAAGAAGTGGTTATCTTGGGTAGGAGAGCTGGTGGCGGGGGACAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS CCA 72 bp | ATTAAGTTCCTGGGACTTGGGAGTCAGGACCCTTCTTaGGTTTTAGTCCCAGCACTGTTTCTGTCTCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: IKFLGLGSQDPS*VLVPALFLSLG Trigger: TCCCAGAGACAGAAACAGTGCTGGGACTAAAACCCAAGAAGGGTCCTGACTCCCAAGTCCCAGGAACTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS CAA 72 bp | CCCGCCACCAGCTCTCCTACCCAAGATAACCACTTCTaGAGTATTCTCAAAGACGGTCTATGCCTTTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: PATSSPTQDNHF*SILKDGLCLSK Trigger: CTTGGAAAGGCATAGACCGTCTTTGAGAATACTCAAGAAGTGGTTATCTTGGGTAGGAGAGCTGGTGGCGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS CCA 72 bp | GTATCTTGGAGGCAAAATAGACAGGAGACTGGAGGCTaGCATAGAGATAGAATGCTGCCCAGAGTCTCTAGT | + |
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Preference number: 6 (lower is better) Translates to: VSWRQNRQETGG*HRDRMLPRVSS Trigger: ACTAGAGACTCTGGGCAGCATTCTATCTCTATGCCAGCCTCCAGTCTCCTGTCTATTTTGCCTCCAAGATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS TCA 72 bp | ACTGTGGTCCTGAAAACCTGTGCTTTCTCGGCCCGATaGAATGCAGAGTTATGTGATAGCATGCTTCTGACT | + |
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Preference number: 6 (lower is better) Translates to: TVVLKTCAFSAR*NAELCDSMLLT Trigger: AGTCAGAAGCATGCTATCACATAACTCTGCATTTCATCGGGCCGAGAAAGCACAGGTTTTCAGGACCACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS GCA 72 bp | TTGCTGCCGAAAAGTCATGCCTTGACCTGGACTTCATaGCTTTGTCTCATAAGTACAGCGATTTGTCACTCC | + |
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Preference number: 6 (lower is better) Translates to: LLPKSHALTWTS*LCLISTAICHS Trigger: GGAGTGACAAATCGCTGTACTTATGAGACAAAGGCATGAAGTCCAGGTCAAGGCATGACTTTTCGGCAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS CAA 72 bp | CCAAGTCCACGTACATATGTATGCACACGTGCCTGTTaGACGTTTTCCAGCAGAAGTGGTAGCGTATCATAC | + |
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Preference number: 6 (lower is better) Translates to: PSPRTYVCTRAC*TFSSRSGSVSY Trigger: GTATGATACGCTACCACTTCTGCTGGAAAACGTCAAACAGGCACGTGTGCATACATATGTACGTGGACTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS CAA 90 bp | TATGCCTTTCCAAGTCCACGTACATATGTATGCACACGTGCCTGTTaGACGTTTTCCAGCAGAAGTGGTAGCGTATCATACACACTGTTC | + |
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Preference number: 6 (lower is better) Translates to: YAFPSPRTYVCTRAC*TFSSRSGSVSYTLF Trigger: GAACAGTGTGTATGATACGCTACCACTTCTGCTGGAAAACGTCAAACAGGCACGTGTGCATACATATGTACGTGGACTTGGAAAGGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS TCA 72 bp | CAAGTCCACGTACATATGTATGCACACGTGCCTGTTTaGCGTTTTCCAGCAGAAGTGGTAGCGTATCATACA | + |
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Preference number: 6 (lower is better) Translates to: QVHVHMYAHVPV*RFPAEVVAYHT Trigger: TGTATGATACGCTACCACTTCTGCTGGAAAACGTCAAACAGGCACGTGTGCATACATATGTACGTGGACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS CAA 72 bp | TGTCTTGGTAGGCCCAAGCAAGGAGATGATGATGGCTaGTACCAGATCGGTGATGTGAAGTTCAAGAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: CLGRPKQGDDDG*YQIGDVKFKKS Trigger: ACTTTTCTTGAACTTCACATCACCGATCTGGTACAAGCCATCATCATCTCCTTGCTTGGGCCTACCAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS TCA 72 bp | CCCTCCCATAGAGAGAAGGGTACAAGGGAGGAATTTTaGCAACGATTAATCAGTTTCAGTGGGAGAGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: PSHREKGTREEF*QRLISFSGREN Trigger: GTTTTCTCTCCCACTGAAACTGATTAATCGTTGTCAAAATTCCTCCCTTGTACCCTTCTCTCTATGGGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS CCA 72 bp | CTAGAAAAGTTGCTGCCGAAAAGTCATGCCTTGACCTaGACTTCATGCCTTTGTCTCATAAGTACAGCGATT | + |
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Preference number: 6 (lower is better) Translates to: LEKLLPKSHALT*TSCLCLISTAI Trigger: AATCGCTGTACTTATGAGACAAAGGCATGAAGTCCAGGTCAAGGCATGACTTTTCGGCAGCAACTTTTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS GCA 72 bp | AGAAGTGGTAGCGTATCATACACACTGTTCTGCATCTaGTGTTCCCATTTAGCAGTATGTCTCAGGGATTAT | + |
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Preference number: 6 (lower is better) Translates to: RSGSVSYTLFCI*CSHLAVCLRDY Trigger: ATAATCCCTGAGACATACTGCTAAATGGGAACAGCAGATGCAGAACAGTGTGTATGATACGCTACCACTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS GCA 72 bp | GATAACCACTTCTTGAGTATTCTCAAAGACGGTCTATaGCTTTCCAAGTCCACGTACATATGTATGCACACG | + |
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Preference number: 6 (lower is better) Translates to: DNHFLSILKDGL*LSKSTYICMHT Trigger: CGTGTGCATACATATGTACGTGGACTTGGAAAGGCATAGACCGTCTTTGAGAATACTCAAGAAGTGGTTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS CCA 72 bp | AAGTTCAAGAAAAGTGGGCAAATTAGAGATGTATCTTaGAGGCAAAATAGACAGGAGACTGGAGGCTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: KFKKSGQIRDVS*RQNRQETGGWH Trigger: ATGCCAGCCTCCAGTCTCCTGTCTATTTTGCCTCCAAGATACATCTCTAATTTGCCCACTTTTCTTGAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS TCA 72 bp | AAGGAGATGATGATGGCTTGTACCAGATCGGTGATGTaGAGTTCAAGAAAAGTGGGCAAATTAGAGATGTAT | + |
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Preference number: 6 (lower is better) Translates to: KEMMMACTRSVM*SSRKVGKLEMY Trigger: ATACATCTCTAATTTGCCCACTTTTCTTGAACTTCACATCACCGATCTGGTACAAGCCATCATCATCTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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| CDS TCA 72 bp | CCTTCCAATAAAATGGCTCTACAAACTACTAGACCTTaGCATGTCAGTGAATATTCGTTTCTGAGGCTAGTT | + |
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Preference number: 6 (lower is better) Translates to: PSNKMALQTTRP*HVSEYSFLRLV Trigger: AACTAGCCTCAGAAACGAATATTCACTGACATGTCAAGGTCTAGTAGTTTGTAGAGCCATTTTATTGGAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443243.1 |
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