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Pregenerated sensors for LINC01633 (Homo sapiens)

Ensembl gene IDs: ENSG00000260976

Ensembl transcript IDs: ENST00000566476.2

Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp ACTCTTGTAGATTCCAGTGTGGATCTGTCAGCTCATCTTCTCTTGTaGCTTCCAAGCCAAGATAATTATTGCAGGAGAAAAGAGGGATGG +
Preference number: 5 (lower is better)
Translates to: TLVDSSVDLSAHLLL*LPSQDNYCRRKEGW
Trigger: CCATCCCTCTTTTCTCCTGCAATAATTATCTTGGCTTGGAAGCCACAAGAGAAGATGAGCTGACAGATCCACACTGGAATCTACAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566476.2
CDS CCA 90 bp TTTGTAGAGTTGTTTTCATCGCTATTTAACTGGTATGGACTCATATaGCCATGTCAGTCATGTACAGCCGATGACGTTCATTCATTGGTC +
Preference number: 5 (lower is better)
Translates to: FVELFSSLFNWYGLI*PCQSCTADDVHSLV
Trigger: GACCAATGAATGAACGTCATCGGCTGTACATGACTGACATGGCCATATGAGTCCATACCAGTTAAATAGCGATGAAAACAACTCTACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566476.2
CDS CAA 72 bp GGAGCCGTAGACCGGAGCTGTTCCTATTTGGCCATCTaGGCTCCTCCTCTACTGCCTTGTTCCTTATGGAAG +
Preference number: 6 (lower is better)
Translates to: GAVDRSCSYLAI*APPLLPCSLWK
Trigger: CTTCCATAAGGAACAAGGCAGTAGAGGAGGAGCCAAGATGGCCAAATAGGAACAGCTCCGGTCTACGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566476.2
CDS GCA 72 bp GAAACTCTGATGGAAATGCAGAAATCACCCGTCTTTTaGATCTCTCACGCTGGGAGCCGTAGACCGGAGCTG +
Preference number: 6 (lower is better)
Translates to: ETLMEMQKSPVF*ISHAGSRRPEL
Trigger: CAGCTCCGGTCTACGGCTCCCAGCGTGAGAGATGCAAAAGACGGGTGATTTCTGCATTTCCATCAGAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566476.2
CDS CAA 90 bp ATGGTCCCCATCTATCTGCAAGTGAGGCTGGGAGATGCGGACATTTaGCAGTCATTGGTGAGCACTGTAACTGTCTCTGCCATATCACCC +
Preference number: 6 (lower is better)
Translates to: MVPIYLQVRLGDADI*QSLVSTVTVSAISP
Trigger: GGGTGATATGGCAGAGACAGTTACAGTGCTCACCAATGACTGCAAAATGTCCGCATCTCCCAGCCTCACTTGCAGATAGATGGGGACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566476.2
CDS TCA 72 bp TGGGAACTAGTTCCATGGTCCCCATCTATCTGCAAGTaGGGCTGGGAGATGCGGACATTTTGCAGTCATTGG +
Preference number: 6 (lower is better)
Translates to: WELVPWSPSICK*GWEMRTFCSHW
Trigger: CCAATGACTGCAAAATGTCCGCATCTCCCAGCCTCACTTGCAGATAGATGGGGACCATGGAACTAGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566476.2
CDS GCA 72 bp CATGGTCCCCATCTATCTGCAAGTGAGGCTGGGAGATaGGGACATTTTGCAGTCATTGGTGAGCACTGTAAC +
Preference number: 6 (lower is better)
Translates to: HGPHLSASEAGR*GHFAVIGEHCN
Trigger: GTTACAGTGCTCACCAATGACTGCAAAATGTCCGCATCTCCCAGCCTCACTTGCAGATAGATGGGGACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566476.2
CDS CCA 72 bp GGCTCCAGACACATGCTATTTCTACTCATAGTTCTTTaGTGGGAACTAGTTCCATGGTCCCCATCTATCTGC +
Preference number: 6 (lower is better)
Translates to: GSRHMLFLLIVL*WELVPWSPSIC
Trigger: GCAGATAGATGGGGACCATGGAACTAGTTCCCACCAAAGAACTATGAGTAGAAATAGCATGTGTCTGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566476.2
CDS CAA 90 bp ATCTATCTGCAAGTGAGGCTGGGAGATGCGGACATTTTGCAGTCATaGGTGAGCACTGTAACTGTCTCTGCCATATCACCCTTTGTTTTT +
Preference number: 6 (lower is better)
Translates to: IYLQVRLGDADILQS*VSTVTVSAISPFVF
Trigger: AAAAACAAAGGGTGATATGGCAGAGACAGTTACAGTGCTCACCAATGACTGCAAAATGTCCGCATCTCCCAGCCTCACTTGCAGATAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566476.2
CDS CAA 72 bp TGGCTCCAGACACATGCTATTTCTACTCATAGTTCTTaGGTGGGAACTAGTTCCATGGTCCCCATCTATCTG +
Preference number: 6 (lower is better)
Translates to: WLQTHAISTHSS*VGTSSMVPIYL
Trigger: CAGATAGATGGGGACCATGGAACTAGTTCCCACCAAAGAACTATGAGTAGAAATAGCATGTGTCTGGAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566476.2
CDS TCA 72 bp TGGACTCATATGGCCATGTCAGTCATGTACAGCCGATaGCGTTCATTCATTGGTCATTGCATTCATTCTAAT +
Preference number: 6 (lower is better)
Translates to: WTHMAMSVMYSR*RSFIGHCIHSN
Trigger: ATTAGAATGAATGCAATGACCAATGAATGAACGTCATCGGCTGTACATGACTGACATGGCCATATGAGTCCA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566476.2
CDS CCA 72 bp TTGTTTTCATCGCTATTTAACTGGTATGGACTCATATaGCCATGTCAGTCATGTACAGCCGATGACGTTCAT +
Preference number: 6 (lower is better)
Translates to: LFSSLFNWYGLI*PCQSCTADDVH
Trigger: ATGAACGTCATCGGCTGTACATGACTGACATGGCCATATGAGTCCATACCAGTTAAATAGCGATGAAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566476.2
CDS CCA 72 bp GATAAATTTGTAGAGTTGTTTTCATCGCTATTTAACTaGTATGGACTCATATGGCCATGTCAGTCATGTACA +
Preference number: 6 (lower is better)
Translates to: DKFVELFSSLFN*YGLIWPCQSCT
Trigger: TGTACATGACTGACATGGCCATATGAGTCCATACCAGTTAAATAGCGATGAAAACAACTCTACAAATTTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566476.2