Pregenerated sensors for LINC01625 (Homo sapiens)
Ensembl gene IDs: ENSG00000238099Ensembl transcript IDs: ENST00000454788.3, ENST00000654256.1, ENST00000655740.1, ENST00000658080.1, ENST00000664461.1, ENST00000665194.1, ENST00000666511.1, ENST00000668014.1
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTGGTTTGTCCTTGCGCTCCTGCACTGACGACCAGCTTTCCTTCTTaGCTGTTGGCTCAGGTCCACAGCCACTCCATGCCCATGCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: LVCPCAPALTTSFPS*LLAQVHSHSMPMPV Trigger: GACTGGCATGGGCATGGAGTGGCTGTGGACCTGAGCCAACAGTCAAGAAGGAAAGCTGGTCGTCAGTGCAGGAGCGCAAGGACAAACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS GCA 90 bp | GGATGTGGTCTGGCAGAGGCCATTGTCACAGAAGATAGTGCAGGCTaGTGGAAGGAAGGGAAGGAAGCCGTTTCTGCCCACAGACCAAGA | + |
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Preference number: 5 (lower is better) Translates to: GCGLAEAIVTEDSAG*WKEGKEAVSAHRPR Trigger: TCTTGGTCTGTGGGCAGAAACGGCTTCCTTCCCTTCCTTCCAGCAGCCTGCACTATCTTCTGTGACAATGGCCTCTGCCAGACCACATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS GCA 90 bp | TGGCCCACATCCAATCACTCAACCTCTGTTGACTGGGTCCAGATCTaGAGATGCCTCAGGCCACAGAGGTATTTGGCTGGACTCCACGTC | + |
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Preference number: 5 (lower is better) Translates to: WPTSNHSTSVDWVQI*RCLRPQRYLAGLHV Trigger: GACGTGGAGTCCAGCCAAATACCTCTGTGGCCTGAGGCATCTGCAGATCTGGACCCAGTCAACAGAGGTTGAGTGATTGGATGTGGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS CCA 90 bp | TGTGGTCTGGCAGAGGCCATTGTCACAGAAGATAGTGCAGGCTGCTaGAAGGAAGGGAAGGAAGCCGTTTCTGCCCACAGACCAAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: CGLAEAIVTEDSAGC*KEGKEAVSAHRPRR Trigger: TCTTCTTGGTCTGTGGGCAGAAACGGCTTCCTTCCCTTCCTTCCAGCAGCCTGCACTATCTTCTGTGACAATGGCCTCTGCCAGACCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS TCA 90 bp | CCAGTTTATTCTCTTACGCTCTGGTTTGTCCTTGCGCTCCTGCACTaGCGACCAGCTTTCCTTCTTGACTGTTGGCTCAGGTCCACAGCC | + |
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Preference number: 5 (lower is better) Translates to: PVYSLTLWFVLALLH*RPAFLLDCWLRSTA Trigger: GGCTGTGGACCTGAGCCAACAGTCAAGAAGGAAAGCTGGTCGTCAGTGCAGGAGCGCAAGGACAAACCAGAGCGTAAGAGAATAAACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS GCA 90 bp | TTCCTTCTTGACTGTTGGCTCAGGTCCACAGCCACTCCATGCCCATaGCAGTCACAGAAGCCACAGCCTCATGTAGACTTTTCCACTAGC | + |
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Preference number: 5 (lower is better) Translates to: FLLDCWLRSTATPCP*QSQKPQPHVDFSTS Trigger: GCTAGTGGAAAAGTCTACATGAGGCTGTGGCTTCTGTGACTGGCATGGGCATGGAGTGGCTGTGGACCTGAGCCAACAGTCAAGAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS CCA 90 bp | CAGTGGCAGATTATGCAAACTGATGACGGTCATGAGTTCACATTGTaGACCACCCAGGCCACAGCTCCTCCAGCAACCACGGATCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: QWQIMQTDDGHEFTL*TTQATAPPATTDLP Trigger: AGGAAGATCCGTGGTTGCTGGAGGAGCTGTGGCCTGGGTGGTCCACAATGTGAACTCATGACCGTCATCAGTTTGCATAATCTGCCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS GCA 90 bp | ACATCCAATCACTCAACCTCTGTTGACTGGGTCCAGATCTGCAGATaGCTCAGGCCACAGAGGTATTTGGCTGGACTCCACGTCTGTGTA | + |
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Preference number: 5 (lower is better) Translates to: TSNHSTSVDWVQICR*LRPQRYLAGLHVCV Trigger: TACACAGACGTGGAGTCCAGCCAAATACCTCTGTGGCCTGAGGCATCTGCAGATCTGGACCCAGTCAACAGAGGTTGAGTGATTGGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS CCA 90 bp | CTGGGTCCAGATCTGCAGATGCCTCAGGCCACAGAGGTATTTGGCTaGACTCCACGTCTGTGTAGAAGGACAAAAGTCTTGCTATTTGCA | + |
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Preference number: 5 (lower is better) Translates to: LGPDLQMPQATEVFG*TPRLCRRTKVLLFA Trigger: TGCAAATAGCAAGACTTTTGTCCTTCTACACAGACGTGGAGTCCAGCCAAATACCTCTGTGGCCTGAGGCATCTGCAGATCTGGACCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS TCA 90 bp | GTTCACGCCCAACGGGCCCAGTTCCAGGACTGTGTTTGCACTCAATaGCATCCTTTTGGATTCAAACTATTTCCCCTCATTGCATACTCC | + |
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Preference number: 5 (lower is better) Translates to: VHAQRAQFQDCVCTQ*HPFGFKLFPLIAYS Trigger: GGAGTATGCAATGAGGGGAAATAGTTTGAATCCAAAAGGATGTCATTGAGTGCAAACACAGTCCTGGAACTGGGCCCGTTGGGCGTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668014.1 |
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| CDS GCA 90 bp | TTAACTATCATTTCCGTCGGGATCACAGATGGTATTGACATGGAATaGATCTGTGGCACAGGCCAGCGAAGAGATGGGTTGGCTTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: LTIISVGITDGIDME*ICGTGQRRDGLASS Trigger: AGAGGAAGCCAACCCATCTCTTCGCTGGCCTGTGCCACAGATGCATTCCATGTCAATACCATCTGTGATCCCGACGGAAATGATAGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654256.1 ENST00000655740.1 ENST00000658080.1 |
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| CDS TCA 90 bp | AAAGTAAGGAATTTTCTGGCCCACATCCAATCACTCAACCTCTGTTaGCTGGGTCCAGATCTGCAGATGCCTCAGGCCACAGAGGTATTT | + |
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Preference number: 5 (lower is better) Translates to: KVRNFLAHIQSLNLC*LGPDLQMPQATEVF Trigger: AAATACCTCTGTGGCCTGAGGCATCTGCAGATCTGGACCCAGTCAACAGAGGTTGAGTGATTGGATGTGGGCCAGAAAATTCCTTACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS TCA 90 bp | ACACGTACACACCAGCATCTGGGTCTTCATACCCGCTTTTCACACTaGTCGTGTGAACTGATTCACAAGCCTTCAAGTGTCCTAGTTAGA | + |
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Preference number: 5 (lower is better) Translates to: TRTHQHLGLHTRFSH*SCELIHKPSSVLVR Trigger: TCTAACTAGGACACTTGAAGGCTTGTGAATCAGTTCACACGATCAGTGTGAAAAGCGGGTATGAAGACCCAGATGCTGGTGTGTACGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000454788.3 ENST00000654256.1 ENST00000655740.1 ENST00000658080.1 ENST00000664461.1 ENST00000665194.1 ENST00000666511.1 ENST00000668014.1 |
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| CDS TCA 90 bp | TCTAAGGATGCCATGAGGAATTCCATGTGTACATGCAGGTCGTGGTaGGTCAATTATAACAGATTCAGAGCTCATCTGTGGGGAACCTGG | + |
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Preference number: 5 (lower is better) Translates to: SKDAMRNSMCTCRSW*VNYNRFRAHLWGTW Trigger: CCAGGTTCCCCACAGATGAGCTCTGAATCTGTTATAATTGACTCACCACGACCTGCATGTACACATGGAATTCCTCATGGCATCCTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654256.1 ENST00000655740.1 ENST00000658080.1 |
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| CDS TCA 90 bp | TCCAGCAACCACGGATCTTCCTTTGGCTTCTCTGAATCTCTAGCCTaGTATATGCACAGCTCCATGGTAAAGTGTGTTGGCTTTACCATG | + |
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Preference number: 5 (lower is better) Translates to: SSNHGSSFGFSESLA*YMHSSMVKCVGFTM Trigger: CATGGTAAAGCCAACACACTTTACCATGGAGCTGTGCATATATCAGGCTAGAGATTCAGAGAAGCCAAAGGAAGATCCGTGGTTGCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS GCA 90 bp | AGGTATTTGGCTGGACTCCACGTCTGTGTAGAAGGACAAAAGTCTTaGTATTTGCAGATTGTGTGGGTAGCAGGAGTCATGACGATGATG | + |
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Preference number: 5 (lower is better) Translates to: RYLAGLHVCVEGQKS*YLQIVWVAGVMTMM Trigger: CATCATCGTCATGACTCCTGCTACCCACACAATCTGCAAATAGCAAGACTTTTGTCCTTCTACACAGACGTGGAGTCCAGCCAAATACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS TCA 90 bp | GCAACAAATTTTAACTATCATTTCCGTCGGGATCACAGATGGTATTaGCATGGAATGCATCTGTGGCACAGGCCAGCGAAGAGATGGGTT | + |
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Preference number: 5 (lower is better) Translates to: ATNFNYHFRRDHRWY*HGMHLWHRPAKRWV Trigger: AACCCATCTCTTCGCTGGCCTGTGCCACAGATGCATTCCATGTCAATACCATCTGTGATCCCGACGGAAATGATAGTTAAAATTTGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654256.1 ENST00000655740.1 ENST00000658080.1 |
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| CDS TCA 90 bp | AGAACCAGACAGTCTATGCGTAGAATGAAGTGGGTAGAGGTATCTTaGCCGTCCTGCTCTATTTGCCTACAGCCATTAGTATTGGCTTTA | + |
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Preference number: 5 (lower is better) Translates to: RTRQSMRRMKWVEVS*PSCSICLQPLVLAL Trigger: TAAAGCCAATACTAATGGCTGTAGGCAAATAGAGCAGGACGGTCAAGATACCTCTACCCACTTCATTCTACGCATAGACTGTCTGGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000454788.3 ENST00000664461.1 ENST00000665194.1 |
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| CDS GCA 90 bp | TTGTGGGTCCCATTGGCTCAATGGTCCTCCCTGGCAAACAAAATCTaGCAGATCATTGCTCAACTTGAATTTGTTTTCGTAAACATGGCT | + |
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Preference number: 5 (lower is better) Translates to: LWVPLAQWSSLANKI*QIIAQLEFVFVNMA Trigger: AGCCATGTTTACGAAAACAAATTCAAGTTGAGCAATGATCTGGCAGATTTTGTTTGCCAGGGAGGACCATTGAGCCAATGGGACCCACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000454788.3 ENST00000664461.1 ENST00000665194.1 |
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| CDS CCA 90 bp | CACGTCTGTGTAGAAGGACAAAAGTCTTGCTATTTGCAGATTGTGTaGGTAGCAGGAGTCATGACGATGATGATGATGATGACGATCATG | + |
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Preference number: 5 (lower is better) Translates to: HVCVEGQKSCYLQIV*VAGVMTMMMMMTIM Trigger: CATGATCGTCATCATCATCATCATCGTCATGACTCCTGCTACCCACACAATCTGCAAATAGCAAGACTTTTGTCCTTCTACACAGACGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS TCA 90 bp | TGTCGACATCTGGATTTTAGTCGTGTAAGACCCATTTTGGACTTCTaGCCGCCAGAACTCATTGCATACTCCATTAACTGTTTCCACTTC | + |
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Preference number: 5 (lower is better) Translates to: CRHLDFSRVRPILDF*PPELIAYSINCFHF Trigger: GAAGTGGAAACAGTTAATGGAGTATGCAATGAGTTCTGGCGGTCAGAAGTCCAAAATGGGTCTTACACGACTAAAATCCAGATGTCGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000454788.3 ENST00000658080.1 ENST00000664461.1 ENST00000665194.1 |
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| CDS CCA 90 bp | TTGAAGTGGGAAAATTGTGGGTCCCATTGGCTCAATGGTCCTCCCTaGCAAACAAAATCTGCCAGATCATTGCTCAACTTGAATTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: LKWENCGSHWLNGPP*QTKSARSLLNLNLF Trigger: AAACAAATTCAAGTTGAGCAATGATCTGGCAGATTTTGTTTGCCAGGGAGGACCATTGAGCCAATGGGACCCACAATTTTCCCACTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000454788.3 ENST00000664461.1 ENST00000665194.1 |
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| CDS TCA 90 bp | CTTATCTCATTGAACCTTGATTCACACACCCATTCTTACCCTAAATaGATACCAGCATCCCTTTTAAAACGGTGGCCCTGGTGTTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: LISLNLDSHTHSYPK*IPASLLKRWPWCSD Trigger: ATCTGAACACCAGGGCCACCGTTTTAAAAGGGATGCTGGTATTCATTTAGGGTAAGAATGGGTGTGTGAATCAAGGTTCAATGAGATAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS GCA 90 bp | GGCTTTAGAAAGTGTATTCTAGTGAATGAGCTGGTAGGATCAGTGTaGATTGCTGTTCTCGGGGGAATTTTTCATAGCCCTTCATCAAAT | + |
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Preference number: 5 (lower is better) Translates to: GFRKCILVNELVGSV*IAVLGGIFHSPSSN Trigger: ATTTGATGAAGGGCTATGAAAAATTCCCCCGAGAACAGCAATGCACACTGATCCTACCAGCTCATTCACTAGAATACACTTTCTAAAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000454788.3 ENST00000664461.1 ENST00000665194.1 |
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| CDS TCA 90 bp | ATGGTCCTCCCTGGCAAACAAAATCTGCCAGATCATTGCTCAACTTaGATTTGTTTTCGTAAACATGGCTATCTGTTACAGTGCCACAAA | + |
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Preference number: 5 (lower is better) Translates to: MVLPGKQNLPDHCST*ICFRKHGYLLQCHK Trigger: TTTGTGGCACTGTAACAGATAGCCATGTTTACGAAAACAAATTCAAGTTGAGCAATGATCTGGCAGATTTTGTTTGCCAGGGAGGACCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000454788.3 ENST00000664461.1 ENST00000665194.1 |
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| CDS TCA 72 bp | CCTTGCGCTCCTGCACTGACGACCAGCTTTCCTTCTTaGCTGTTGGCTCAGGTCCACAGCCACTCCATGCCC | + |
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Preference number: 6 (lower is better) Translates to: PCAPALTTSFPS*LLAQVHSHSMP Trigger: GGGCATGGAGTGGCTGTGGACCTGAGCCAACAGTCAAGAAGGAAAGCTGGTCGTCAGTGCAGGAGCGCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS CAA 90 bp | TCTGGTTTGTCCTTGCGCTCCTGCACTGACGACCAGCTTTCCTTCTaGACTGTTGGCTCAGGTCCACAGCCACTCCATGCCCATGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SGLSLRSCTDDQLSF*TVGSGPQPLHAHAS Trigger: ACTGGCATGGGCATGGAGTGGCTGTGGACCTGAGCCAACAGTCAAGAAGGAAAGCTGGTCGTCAGTGCAGGAGCGCAAGGACAAACCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS TCA 72 bp | TCAGCCTTCCCAGGGACCTCCCTGGACTCTGAGAAGTaGTTAAAGGGACTGTGCGGCAGTCATGGGGATGCA | + |
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Preference number: 6 (lower is better) Translates to: SAFPGTSLDSEK*LKGLCGSHGDA Trigger: TGCATCCCCATGACTGCCGCACAGTCCCTTTAATCACTTCTCAGAGTCCAGGGAGGTCCCTGGGAAGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS GCA 72 bp | GACTGTTGGCTCAGGTCCACAGCCACTCCATGCCCATaGCAGTCACAGAAGCCACAGCCTCATGTAGACTTT | + |
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Preference number: 6 (lower is better) Translates to: DCWLRSTATPCP*QSQKPQPHVDF Trigger: AAAGTCTACATGAGGCTGTGGCTTCTGTGACTGGCATGGGCATGGAGTGGCTGTGGACCTGAGCCAACAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS GCA 72 bp | CTTCTTGACTGTTGGCTCAGGTCCACAGCCACTCCATaGCCATGCCAGTCACAGAAGCCACAGCCTCATGTA | + |
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Preference number: 6 (lower is better) Translates to: LLDCWLRSTATP*PCQSQKPQPHV Trigger: TACATGAGGCTGTGGCTTCTGTGACTGGCATGGGCATGGAGTGGCTGTGGACCTGAGCCAACAGTCAAGAAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS CCA 72 bp | GGTGGCCCTGGTGTTCAGATGTTGTTTATCCTCTCTTaGGGACCACCAACCCTAGTGGGGGAAGGCATGAAG | + |
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Preference number: 6 (lower is better) Translates to: GGPGVQMLFILS*GPPTLVGEGMK Trigger: CTTCATGCCTTCCCCCACTAGGGTTGGTGGTCCCCAAGAGAGGATAAACAACATCTGAACACCAGGGCCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS CAA 90 bp | CGTGAGCCACCGTGCTTGGCCCAGTTTATTCTCTTACGCTCTGGTTaGTCCTTGCGCTCCTGCACTGACGACCAGCTTTCCTTCTTGACT | + |
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Preference number: 6 (lower is better) Translates to: REPPCLAQFILLRSG*SLRSCTDDQLSFLT Trigger: AGTCAAGAAGGAAAGCTGGTCGTCAGTGCAGGAGCGCAAGGACAAACCAGAGCGTAAGAGAATAAACTGGGCCAAGCACGGTGGCTCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS CAA 72 bp | CAGGTAGATCTGCTAGTGGGGCTTCCAGGGGCTGTCTaGTCTCTGAGAGAATGTCCTTGGTGTCAGTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: QVDLLVGLPGAV*SLRECPWCQLP Trigger: AGGCAACTGACACCAAGGACATTCTCTCAGAGACAAGACAGCCCCTGGAAGCCCCACTAGCAGATCTACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS CCA 72 bp | ATTATGCAAACTGATGACGGTCATGAGTTCACATTGTaGACCACCCAGGCCACAGCTCCTCCAGCAACCACG | + |
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Preference number: 6 (lower is better) Translates to: IMQTDDGHEFTL*TTQATAPPATT Trigger: CGTGGTTGCTGGAGGAGCTGTGGCCTGGGTGGTCCACAATGTGAACTCATGACCGTCATCAGTTTGCATAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS CAA 72 bp | CAGATTATGCAAACTGATGACGGTCATGAGTTCACATaGTGGACCACCCAGGCCACAGCTCCTCCAGCAACC | + |
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Preference number: 6 (lower is better) Translates to: QIMQTDDGHEFT*WTTQATAPPAT Trigger: GGTTGCTGGAGGAGCTGTGGCCTGGGTGGTCCACAATGTGAACTCATGACCGTCATCAGTTTGCATAATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS CAA 90 bp | GTTGACTGGGTCCAGATCTGCAGATGCCTCAGGCCACAGAGGTATTaGGCTGGACTCCACGTCTGTGTAGAAGGACAAAAGTCTTGCTAT | + |
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Preference number: 6 (lower is better) Translates to: VDWVQICRCLRPQRY*AGLHVCVEGQKSCY Trigger: ATAGCAAGACTTTTGTCCTTCTACACAGACGTGGAGTCCAGCCAAATACCTCTGTGGCCTGAGGCATCTGCAGATCTGGACCCAGTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS TCA 72 bp | AATTTTCTGGCCCACATCCAATCACTCAACCTCTGTTaGCTGGGTCCAGATCTGCAGATGCCTCAGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: NFLAHIQSLNLC*LGPDLQMPQAT Trigger: TGTGGCCTGAGGCATCTGCAGATCTGGACCCAGTCAACAGAGGTTGAGTGATTGGATGTGGGCCAGAAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS CCA 72 bp | GATCTGCAGATGCCTCAGGCCACAGAGGTATTTGGCTaGACTCCACGTCTGTGTAGAAGGACAAAAGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: DLQMPQATEVFG*TPRLCRRTKVL Trigger: CAAGACTTTTGTCCTTCTACACAGACGTGGAGTCCAGCCAAATACCTCTGTGGCCTGAGGCATCTGCAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS CAA 72 bp | TTGGCCCAGTTTATTCTCTTACGCTCTGGTTTGTCCTaGCGCTCCTGCACTGACGACCAGCTTTCCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LAQFILLRSGLS*RSCTDDQLSFL Trigger: CAAGAAGGAAAGCTGGTCGTCAGTGCAGGAGCGCAAGGACAAACCAGAGCGTAAGAGAATAAACTGGGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS TCA 72 bp | CTGGCAGAATTACAGTGCTCTTGCTGCTCCCTAACATaGTGTAGGATCCTCAGTTCTTCCTCCCTGTCGACA | + |
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Preference number: 6 (lower is better) Translates to: LAELQCSCCSLT*CRILSSSSLST Trigger: TGTCGACAGGGAGGAAGAACTGAGGATCCTACATCATGTTAGGGAGCAGCAAGAGCACTGTAATTCTGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658080.1 |
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| CDS CCA 72 bp | TGTTGGGGCTTATATGCACACGTACACACCAGCATCTaGGTCTTCATACCCGCTTTTCACACTGATCGTGTG | + |
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Preference number: 6 (lower is better) Translates to: CWGLYAHVHTSI*VFIPAFHTDRV Trigger: CACACGATCAGTGTGAAAAGCGGGTATGAAGACCCAGATGCTGGTGTGTACGTGTGCATATAAGCCCCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000454788.3 ENST00000654256.1 ENST00000655740.1 ENST00000658080.1 ENST00000664461.1 ENST00000665194.1 ENST00000666511.1 ENST00000668014.1 |
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| CDS CCA 72 bp | AATTATAACAGATTCAGAGCTCATCTGTGGGGAACCTaGGGAAAGACTGGGTCCCGGGTGAGCCACAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: NYNRFRAHLWGT*GKTGSRVSHSF Trigger: AAAACTGTGGCTCACCCGGGACCCAGTCTTTCCCCAGGTTCCCCACAGATGAGCTCTGAATCTGTTATAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654256.1 ENST00000655740.1 ENST00000658080.1 |
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| CDS CCA 72 bp | CACCCACTGAAGGTGGATGTAGAACTGCAGGTGCAGTaGCAGATTATGCAAACTGATGACGGTCATGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: HPLKVDVELQVQ*QIMQTDDGHEF Trigger: GAACTCATGACCGTCATCAGTTTGCATAATCTGCCACTGCACCTGCAGTTCTACATCCACCTTCAGTGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS TCA 72 bp | CACCAGCATCTGGGTCTTCATACCCGCTTTTCACACTaGTCGTGTGAACTGATTCACAAGCCTTCAAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: HQHLGLHTRFSH*SCELIHKPSSV Trigger: GACACTTGAAGGCTTGTGAATCAGTTCACACGATCAGTGTGAAAAGCGGGTATGAAGACCCAGATGCTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000454788.3 ENST00000654256.1 ENST00000655740.1 ENST00000658080.1 ENST00000664461.1 ENST00000665194.1 ENST00000666511.1 ENST00000668014.1 |
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| CDS TCA 72 bp | TTAGTCCAGCTCTCCAAGCCTGTGGATGATTTCGTCTaGGTTCCCAGCAGTCTTAAAGCTTTGCCAACAGCA | + |
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Preference number: 6 (lower is better) Translates to: LVQLSKPVDDFV*VPSSLKALPTA Trigger: TGCTGTTGGCAAAGCTTTAAGACTGCTGGGAACTCAGACGAAATCATCCACAGGCTTGGAGAGCTGGACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655740.1 ENST00000665194.1 |
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| CDS CAA 72 bp | GGTTCACGCCCAACGGGCCCAGTTCCAGGACTGTGTTaGCACTCAATGACATCCTTTTGGATTCAAACTATT | + |
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Preference number: 6 (lower is better) Translates to: GSRPTGPVPGLC*HSMTSFWIQTI Trigger: AATAGTTTGAATCCAAAAGGATGTCATTGAGTGCAAACACAGTCCTGGAACTGGGCCCGTTGGGCGTGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668014.1 |
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| CDS CAA 90 bp | GAGGTATTTGGCTGGACTCCACGTCTGTGTAGAAGGACAAAAGTCTaGCTATTTGCAGATTGTGTGGGTAGCAGGAGTCATGACGATGAT | + |
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Preference number: 6 (lower is better) Translates to: EVFGWTPRLCRRTKV*LFADCVGSRSHDDD Trigger: ATCATCGTCATGACTCCTGCTACCCACACAATCTGCAAATAGCAAGACTTTTGTCCTTCTACACAGACGTGGAGTCCAGCCAAATACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS TCA 72 bp | TTTAACTATCATTTCCGTCGGGATCACAGATGGTATTaGCATGGAATGCATCTGTGGCACAGGCCAGCGAAG | + |
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Preference number: 6 (lower is better) Translates to: FNYHFRRDHRWY*HGMHLWHRPAK Trigger: CTTCGCTGGCCTGTGCCACAGATGCATTCCATGTCAATACCATCTGTGATCCCGACGGAAATGATAGTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654256.1 ENST00000655740.1 ENST00000658080.1 |
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| CDS TCA 72 bp | CACGGATCTTCCTTTGGCTTCTCTGAATCTCTAGCCTaGTATATGCACAGCTCCATGGTAAAGTGTGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: HGSSFGFSESLA*YMHSSMVKCVG Trigger: GCCAACACACTTTACCATGGAGCTGTGCATATATCAGGCTAGAGATTCAGAGAAGCCAAAGGAAGATCCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS TCA 72 bp | CAGTCTATGCGTAGAATGAAGTGGGTAGAGGTATCTTaGCCGTCCTGCTCTATTTGCCTACAGCCATTAGTA | + |
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Preference number: 6 (lower is better) Translates to: QSMRRMKWVEVS*PSCSICLQPLV Trigger: TACTAATGGCTGTAGGCAAATAGAGCAGGACGGTCAAGATACCTCTACCCACTTCATTCTACGCATAGACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000454788.3 ENST00000664461.1 ENST00000665194.1 |
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| CDS TCA 72 bp | GCCATGAGGAATTCCATGTGTACATGCAGGTCGTGGTaGGTCAATTATAACAGATTCAGAGCTCATCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: AMRNSMCTCRSW*VNYNRFRAHLW Trigger: CCACAGATGAGCTCTGAATCTGTTATAATTGACTCACCACGACCTGCATGTACACATGGAATTCCTCATGGC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654256.1 ENST00000655740.1 ENST00000658080.1 |
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| CDS TCA 72 bp | CAACGGGCCCAGTTCCAGGACTGTGTTTGCACTCAATaGCATCCTTTTGGATTCAAACTATTTCCCCTCATT | + |
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Preference number: 6 (lower is better) Translates to: QRAQFQDCVCTQ*HPFGFKLFPLI Trigger: AATGAGGGGAAATAGTTTGAATCCAAAAGGATGTCATTGAGTGCAAACACAGTCCTGGAACTGGGCCCGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668014.1 |
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| CDS GCA 72 bp | AAGTGTATTCTAGTGAATGAGCTGGTAGGATCAGTGTaGATTGCTGTTCTCGGGGGAATTTTTCATAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: KCILVNELVGSV*IAVLGGIFHSP Trigger: AGGGCTATGAAAAATTCCCCCGAGAACAGCAATGCACACTGATCCTACCAGCTCATTCACTAGAATACACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000454788.3 ENST00000664461.1 ENST00000665194.1 |
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| CDS CCA 72 bp | AGCCTGATATATGCACAGCTCCATGGTAAAGTGTGTTaGCTTTACCATGCAGATTTCCTTGTCACTGATGCT | + |
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Preference number: 6 (lower is better) Translates to: SLIYAQLHGKVC*LYHADFLVTDA Trigger: AGCATCAGTGACAAGGAAATCTGCATGGTAAAGCCAACACACTTTACCATGGAGCTGTGCATATATCAGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS CAA 72 bp | GAAGTGGGTAGAGGTATCTTGACCGTCCTGCTCTATTaGCCTACAGCCATTAGTATTGGCTTTAGAAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: EVGRGILTVLLY*PTAISIGFRKC Trigger: ACACTTTCTAAAGCCAATACTAATGGCTGTAGGCAAATAGAGCAGGACGGTCAAGATACCTCTACCCACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000454788.3 ENST00000664461.1 ENST00000665194.1 |
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| CDS CAA 90 bp | CAGGCTGAAGGCCAGCAGCCAGCATTTTGCTTAGGTGTGAGGCTGTaGCATAGCAACTTTCTGTTCAAATATGCTAAAAATGGATTCTTA | + |
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Preference number: 6 (lower is better) Translates to: QAEGQQPAFCLGVRL*HSNFLFKYAKNGFL Trigger: TAAGAATCCATTTTTAGCATATTTGAACAGAAAGTTGCTATGCAACAGCCTCACACCTAAGCAAAATGCTGGCTGCTGGCCTTCAGCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS TCA 72 bp | CTGGATTTTAGTCGTGTAAGACCCATTTTGGACTTCTaGCCGCCAGAACTCATTGCATACTCCATTAACTGT | + |
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Preference number: 6 (lower is better) Translates to: LDFSRVRPILDF*PPELIAYSINC Trigger: ACAGTTAATGGAGTATGCAATGAGTTCTGGCGGTCAGAAGTCCAAAATGGGTCTTACACGACTAAAATCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000454788.3 ENST00000658080.1 ENST00000664461.1 ENST00000665194.1 |
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| CDS GCA 72 bp | CCATTGGCTCAATGGTCCTCCCTGGCAAACAAAATCTaGCAGATCATTGCTCAACTTGAATTTGTTTTCGTA | + |
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Preference number: 6 (lower is better) Translates to: PLAQWSSLANKI*QIIAQLEFVFV Trigger: TACGAAAACAAATTCAAGTTGAGCAATGATCTGGCAGATTTTGTTTGCCAGGGAGGACCATTGAGCCAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000454788.3 ENST00000664461.1 ENST00000665194.1 |
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| CDS CCA 72 bp | GCTGTTGTTTCTACAAACTCATTCCGGGGAGAGAAATaGAGACATCTATTGTGTACCTTTGTACTGGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: AVVSTNSFRGEK*RHLLCTFVLGH Trigger: ATGACCCAGTACAAAGGTACACAATAGATGTCTCCATTTCTCTCCCCGGAATGAGTTTGTAGAAACAACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS CCA 72 bp | GTAGAAGGACAAAAGTCTTGCTATTTGCAGATTGTGTaGGTAGCAGGAGTCATGACGATGATGATGATGATG | + |
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Preference number: 6 (lower is better) Translates to: VEGQKSCYLQIV*VAGVMTMMMMM Trigger: CATCATCATCATCATCGTCATGACTCCTGCTACCCACACAATCTGCAAATAGCAAGACTTTTGTCCTTCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS CAA 72 bp | TCCGGGGAGAGAAATGGAGACATCTATTGTGTACCTTaGTACTGGGTCATCTTAGTTAAACTCCATTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: SGERNGDIYCVP*YWVILVKLHFS Trigger: CGAGAAATGGAGTTTAACTAAGATGACCCAGTACAAAGGTACACAATAGATGTCTCCATTTCTCTCCCCGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS GCA 72 bp | GTCAATCAGATCTTAATGGTCACCTTAAGATTATACTaGTGTGACCTCAGAGAACCAGACAGTCTATGCGTA | + |
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Preference number: 6 (lower is better) Translates to: VNQILMVTLRLY*CDLREPDSLCV Trigger: TACGCATAGACTGTCTGGTTCTCTGAGGTCACAGCAGTATAATCTTAAGGTGACCATTAAGATCTGATTGAC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000454788.3 ENST00000664461.1 ENST00000665194.1 |
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| CDS TCA 72 bp | CCTGGCAAACAAAATCTGCCAGATCATTGCTCAACTTaGATTTGTTTTCGTAAACATGGCTATCTGTTACAG | + |
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Preference number: 6 (lower is better) Translates to: PGKQNLPDHCST*ICFRKHGYLLQ Trigger: CTGTAACAGATAGCCATGTTTACGAAAACAAATTCAAGTTGAGCAATGATCTGGCAGATTTTGTTTGCCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000454788.3 ENST00000664461.1 ENST00000665194.1 |
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| CDS TCA 72 bp | TGCTACATCCATTTTATAGATGGTAATACCGAGGAATaGGTTACAGGACAGTTGAAATTAGCACCTACAATC | + |
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Preference number: 6 (lower is better) Translates to: CYIHFIDGNTEE*VTGQLKLAPTI Trigger: GATTGTAGGTGCTAATTTCAACTGTCCTGTAACTCATTCCTCGGTATTACCATCTATAAAATGGATGTAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000454788.3 ENST00000664461.1 ENST00000665194.1 |
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| CDS GCA 72 bp | GTATCTCCCAGTTGTGACTACTTTCAGTGTTTTAATTaGAGGTTAGTTTGGGCTATCTGCATAAAGATGAAT | + |
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Preference number: 6 (lower is better) Translates to: VSPSCDYFQCFN*RLVWAICIKMN Trigger: ATTCATCTTTATGCAGATAGCCCAAACTAACCTGCAATTAAAACACTGAAAGTAGTCACAACTGGGAGATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654256.1 ENST00000655740.1 ENST00000658080.1 |
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| CDS CAA 72 bp | TATTTTACATCACTCACGGTAGTTCTGCTTATCTCATaGAACCTTGATTCACACACCCATTCTTACCCTAAA | + |
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Preference number: 6 (lower is better) Translates to: YFTSLTVVLLIS*NLDSHTHSYPK Trigger: TTTAGGGTAAGAATGGGTGTGTGAATCAAGGTTCAATGAGATAAGCAGAACTACCGTGAGTGATGTAAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS CAA 90 bp | CTCTGTATTTTATCCGGTATGTTAGCTGAACTTGTAAACTTGAACTaGTTTCATGTAACTCAAGTATACTATCCACAGGAGAGAAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: LCILSGMLAELVNLN*FHVTQVYYPQERSS Trigger: ACTACTTCTCTCCTGTGGATAGTATACTTGAGTTACATGAAACAAGTTCAAGTTTACAAGTTCAGCTAACATACCGGATAAAATACAGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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| CDS CAA 90 bp | ATCCTTCTCTGTATTTTATCCGGTATGTTAGCTGAACTTGTAAACTaGAACTTGTTTCATGTAACTCAAGTATACTATCCACAGGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: ILLCILSGMLAELVN*NLFHVTQVYYPQER Trigger: TCTCTCCTGTGGATAGTATACTTGAGTTACATGAAACAAGTTCAAGTTTACAAGTTCAGCTAACATACCGGATAAAATACAGAGAAGGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666511.1 ENST00000668014.1 |
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