Pregenerated sensors for LINC01622 (Homo sapiens)
Ensembl gene IDs: ENSG00000286785Ensembl transcript IDs: ENST00000612554.2, ENST00000655659.1, ENST00000661526.1, ENST00000662378.1, ENST00000663447.1, ENST00000664781.1, ENST00000668813.1, ENST00000669177.1
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCCCATGTTCCCGGGCATCCCACTGCACTGCAGCTCCAGCACATCTaGACAGGGGTCTGTGCCCTCACCTGCAACCTGTCTAGGGCATTG | + |
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Preference number: 5 (lower is better) Translates to: PHVPGHPTALQLQHI*TGVCALTCNLSRAL Trigger: CAATGCCCTAGACAGGTTGCAGGTGAGGGCACAGACCCCTGTGCAGATGTGCTGGAGCTGCAGTGCAGTGGGATGCCCGGGAACATGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669177.1 |
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| CDS GCA 90 bp | CAATGGCTCTGGATCCTGCTCCAAGCCAGACCACACCCGTGGCCTTaGCAGAGGAGAGAACCCACCTGCCCCTCCTCTCCCAACAACAAC | + |
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Preference number: 5 (lower is better) Translates to: QWLWILLQARPHPWP*QRREPTCPSSPNNN Trigger: GTTGTTGTTGGGAGAGGAGGGGCAGGTGGGTTCTCTCCTCTGGCAAGGCCACGGGTGTGGTCTGGCTTGGAGCAGGATCCAGAGCCATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669177.1 |
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| CDS GCA 90 bp | CAGCAGGAGCTTCATAGTTCCTCAGAGTTCAATGGCTCTGGATCCTaGTCCAAGCCAGACCACACCCGTGGCCTTGCCAGAGGAGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: QQELHSSSEFNGSGS*SKPDHTRGLARGEN Trigger: GTTCTCTCCTCTGGCAAGGCCACGGGTGTGGTCTGGCTTGGAGCAGGATCCAGAGCCATTGAACTCTGAGGAACTATGAAGCTCCTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669177.1 |
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| CDS TCA 90 bp | GGACTGGTGGGAGGTGTCTGGGTCATGGAGCAGTTCCCTCATGCGTaGCTTGCTGCTGCGGGAGAGCTGCTTATTAAAGAGTCTGAAACC | + |
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Preference number: 5 (lower is better) Translates to: GLVGGVWVMEQFPHA*LAAAGELLIKESET Trigger: GGTTTCAGACTCTTTAATAAGCAGCTCTCCCGCAGCAGCAAGTCACGCATGAGGGAACTGCTCCATGACCCAGACACCTCCCACCAGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668813.1 |
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| CDS TCA 90 bp | GTTTTCCTATGGAGAAGGATCCCCCTGTGTGGGACTGGCATCCTCTaGGGACTGCAGGACTGTACCTGGGTGATGAGAAAGGAAGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: VFLWRRIPLCGTGIL*GLQDCTWVMRKEAK Trigger: CTTGGCTTCCTTTCTCATCACCCAGGTACAGTCCTGCAGTCCTCAGAGGATGCCAGTCCCACACAGGGGGATCCTTCTCCATAGGAAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000612554.2 ENST00000655659.1 ENST00000661526.1 ENST00000662378.1 ENST00000663447.1 ENST00000664781.1 ENST00000668813.1 |
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| CDS TCA 90 bp | ATCCCAGATGCCTGGTACTGTCTCAAGACTGCAGGCACTGAAACGTaGCCCCGGTGTCTCAGGCTGAAACAGCAAACTCCCAACCGAGTT | + |
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Preference number: 5 (lower is better) Translates to: IPDAWYCLKTAGTET*PRCLRLKQQTPNRV Trigger: AACTCGGTTGGGAGTTTGCTGTTTCAGCCTGAGACACCGGGGTCACGTTTCAGTGCCTGCAGTCTTGAGACAGTACCAGGCATCTGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000655659.1 ENST00000661526.1 ENST00000662378.1 ENST00000663447.1 ENST00000664781.1 ENST00000668813.1 |
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| CDS TCA 90 bp | CAGCTTCATCCCAGATGCCTGGTACTGTCTCAAGACTGCAGGCACTaGAACGTGACCCCGGTGTCTCAGGCTGAAACAGCAAACTCCCAA | + |
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Preference number: 5 (lower is better) Translates to: QLHPRCLVLSQDCRH*NVTPVSQAETANSQ Trigger: TTGGGAGTTTGCTGTTTCAGCCTGAGACACCGGGGTCACGTTTCAGTGCCTGCAGTCTTGAGACAGTACCAGGCATCTGGGATGAAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000655659.1 ENST00000661526.1 ENST00000662378.1 ENST00000663447.1 ENST00000664781.1 ENST00000668813.1 |
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| CDS GCA 90 bp | CAGGTCTCTCTGCAGTTTGGAAGGAGGAGATCACACTTCTCATCGTaGAGCTCGCCATCTCCACGTGCCTTTGACTTCCAGGCATCTCAG | + |
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Preference number: 5 (lower is better) Translates to: QVSLQFGRRRSHFSS*SSPSPRAFDFQASQ Trigger: CTGAGATGCCTGGAAGTCAAAGGCACGTGGAGATGGCGAGCTGCACGATGAGAAGTGTGATCTCCTCCTTCCAAACTGCAGAGAGACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669177.1 |
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| CDS GCA 90 bp | GATCCCTGGAACCAGGCCCGCCTTGTGCCAGTTTTGGAATTTCATTaGCGCGTAGCTACCGTATTGGGCAAATTAGCACCAGATCGACCA | + |
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Preference number: 5 (lower is better) Translates to: DPWNQARLVPVLEFH*RVATVLGKLAPDRP Trigger: TGGTCGATCTGGTGCTAATTTGCCCAATACGGTAGCTACGCGGCAATGAAATTCCAAAACTGGCACAAGGCGGGCCTGGTTCCAGGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000612554.2 ENST00000655659.1 |
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| CDS GCA 90 bp | TGGTGGGCTGGGGACAACACGGAGGAGGGAGATTTTTCTATTCAGTaGCCAGTTGACTCCACCGCTGAGGGCCAGTATAGTGAAGTTAAA | + |
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Preference number: 5 (lower is better) Translates to: WWAGDNTEEGDFSIQ*PVDSTAEGQYSEVK Trigger: TTTAACTTCACTATACTGGCCCTCAGCGGTGGAGTCAACTGGGCACTGAATAGAAAAATCTCCCTCCTCCGTGTTGTCCCCAGCCCACCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663447.1 |
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| CDS GCA 90 bp | TTCATAAAGCCCATCACATACAGACCTACACAGAATCTCCAGTCCTaGCACACCTCTCGCTGGCTTGTCCTTGTGTCTGCCGGCTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: FIKPITYRPTQNLQS*HTSRWLVLVSAGSE Trigger: TTCTGAGCCGGCAGACACAAGGACAAGCCAGCGAGAGGTGTGGCAGGACTGGAGATTCTGTGTAGGTCTGTATGTGATGGGCTTTATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664781.1 ENST00000669177.1 |
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| CDS GCA 90 bp | TCGTCCTGGAGAAGGGCTAGGTTGATCTGTCTCCTCAGAGCAGACTaGACAGCCTTCCCGAAGAAAAACATGCAGGGCCTTTCATTTTTC | + |
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Preference number: 5 (lower is better) Translates to: SSWRRARLICLLRAD*TAFPKKNMQGLSFF Trigger: GAAAAATGAAAGGCCCTGCATGTTTTTCTTCGGGAAGGCTGTGCAGTCTGCTCTGAGGAGACAGATCAACCTAGCCCTTCTCCAGGACGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000612554.2 ENST00000655659.1 ENST00000662378.1 ENST00000664781.1 |
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| CDS GCA 90 bp | AAATCCTGGAACCAGGCCCGCCTTGTGCCAGTTTTGGAATTTCATTaGCGCGTAGCTACCGTATTGGGCAAATTAGCACCAGATCGACCA | + |
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Preference number: 5 (lower is better) Translates to: KSWNQARLVPVLEFH*RVATVLGKLAPDRP Trigger: TGGTCGATCTGGTGCTAATTTGCCCAATACGGTAGCTACGCGGCAATGAAATTCCAAAACTGGCACAAGGCGGGCCTGGTTCCAGGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662378.1 |
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| CDS TCA 90 bp | CAAACCAGACTCTGTGCTGCTTCTGCTTTATACACAGGCCCTGGCTaGAAACCCTTGACTTTACCAGGCATGCAAGGAGATGCTAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: QTRLCAASALYTGPG*KPLTLPGMQGDAKS Trigger: GGACTTAGCATCTCCTTGCATGCCTGGTAAAGTCAAGGGTTTTCAGCCAGGGCCTGTGTATAAAGCAGAAGCAGCACAGAGTCTGGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000655659.1 ENST00000661526.1 ENST00000662378.1 ENST00000663447.1 ENST00000664781.1 ENST00000668813.1 |
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| CDS GCA 90 bp | CACTCGCTGCTGCGATGTGTTTGTCAAAGAGTTTACTTAGAGAGCTaGAGAGCTATCAGAGAGGAGAAGAGAAGCGCTTCGCCCTCACTT | + |
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Preference number: 5 (lower is better) Translates to: HSLLRCVCQRVYLES*RAIREEKRSASPSL Trigger: AAGTGAGGGCGAAGCGCTTCTCTTCTCCTCTCTGATAGCTCTGCAGCTCTCTAAGTAAACTCTTTGACAAACACATCGCAGCAGCGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663447.1 |
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| CDS CCA 90 bp | GTGGACTTTCATTGGGAGGCACAGAAGGTCTGGTTGTCTCCCTTTTaGGGTGATGGTTGCCCGGAGTATGGTTTACTCTTAACTCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: VDFHWEAQKVWLSPF*GDGCPEYGLLLTPF Trigger: GAAAGGAGTTAAGAGTAAACCATACTCCGGGCAACCATCACCCCAAAAGGGAGACAACCAGACCTTCTGTGCCTCCCAATGAAAGTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661526.1 |
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| CDS TCA 90 bp | TTCCCTTCCAGGTCATCACCAGCACCTCTCCCAGAGTTTAGTTCATaGGTTTGCATGGCCTGGAGTTTCTCTCTGAAGCTTTTGCTGTAC | + |
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Preference number: 5 (lower is better) Translates to: FPSRSSPAPLPEFSS*VCMAWSFSLKLLLY Trigger: GTACAGCAAAAGCTTCAGAGAGAAACTCCAGGCCATGCAAACTCATGAACTAAACTCTGGGAGAGGTGCTGGTGATGACCTGGAAGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669177.1 |
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| CDS TCA 90 bp | CATCTGAAGGTAGCATTAGCATTTGAGAGGAAAGATCTTGAGGACTaGGTGTGCTTAGCCACTGTGCACCTCGAACCTGCATTGTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: HLKVALAFERKDLED*VCLATVHLEPALFL Trigger: GAGGAACAATGCAGGTTCGAGGTGCACAGTGGCTAAGCACACTCAGTCCTCAAGATCTTTCCTCTCAAATGCTAATGCTACCTTCAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000612554.2 ENST00000655659.1 ENST00000661526.1 ENST00000662378.1 ENST00000663447.1 ENST00000664781.1 ENST00000668813.1 |
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| CDS TCA 90 bp | CACGCTCACTTTCTTAGGATGCCATGGCAAAGCCCCGCAGACTGGTaGGCCTTAAATAACAGGAATTTATTGTCTCACAGTTCTGGAGTC | + |
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Preference number: 5 (lower is better) Translates to: HAHFLRMPWQSPADW*ALNNRNLLSHSSGV Trigger: GACTCCAGAACTGTGAGACAATAAATTCCTGTTATTTAAGGCTCACCAGTCTGCGGGGCTTTGCCATGGCATCCTAAGAAAGTGAGCGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669177.1 |
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| CDS GCA 90 bp | AGTAAAGGCTTCCTGAGGCCTCTCCAGAAGCAGTTCCTGACACTATaGTTCTTGTACAGTCTTTCATTTTTCTTGGCCTCTTGCTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: SKGFLRPLQKQFLTL*FLYSLSFFLASCFP Trigger: GGGGAAGCAAGAGGCCAAGAAAAATGAAAGACTGTACAAGAAGCATAGTGTCAGGAACTGCTTCTGGAGAGGCCTCAGGAAGCCTTTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668813.1 |
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| CDS TCA 90 bp | CTTTCATTGGGAGGCACAGAAGGTCTGGTTGTCTCCCTTTTGGGGTaGTGGTTGCCCGGAGTATGGTTTACTCTTAACTCCTTTCATTTT | + |
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Preference number: 5 (lower is better) Translates to: LSLGGTEGLVVSLLG*WLPGVWFTLNSFHF Trigger: AAAATGAAAGGAGTTAAGAGTAAACCATACTCCGGGCAACCATCACCCCAAAAGGGAGACAACCAGACCTTCTGTGCCTCCCAATGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661526.1 |
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| CDS TCA 90 bp | TCCCAGAGTTTAGTTCATGAGTTTGCATGGCCTGGAGTTTCTCTCTaGAGCTTTTGCTGTACATACATACTGAGGAAGAGAGCAGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: SQSLVHEFAWPGVSL*SFCCTYILRKRAEK Trigger: TTTTTCTGCTCTCTTCCTCAGTATGTATGTACAGCAAAAGCTTCAGAGAGAAACTCCAGGCCATGCAAACTCATGAACTAAACTCTGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669177.1 |
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| CDS CCA 72 bp | TGGCTCTGGATCCTGCTCCAAGCCAGACCACACCCGTaGCCTTGCCAGAGGAGAGAACCCACCTGCCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: WLWILLQARPHP*PCQRREPTCPS Trigger: GGAGGGGCAGGTGGGTTCTCTCCTCTGGCAAGGCCACGGGTGTGGTCTGGCTTGGAGCAGGATCCAGAGCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669177.1 |
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| CDS CAA 72 bp | CTGGATCCTGCTCCAAGCCAGACCACACCCGTGGCCTaGCCAGAGGAGAGAACCCACCTGCCCCTCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LDPAPSQTTPVA*PEERTHLPLLS Trigger: GGAGAGGAGGGGCAGGTGGGTTCTCTCCTCTGGCAAGGCCACGGGTGTGGTCTGGCTTGGAGCAGGATCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669177.1 |
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| CDS GCA 72 bp | CCCGGGCATCCCACTGCACTGCAGCTCCAGCACATCTaGACAGGGGTCTGTGCCCTCACCTGCAACCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: PGHPTALQLQHI*TGVCALTCNLS Trigger: AGACAGGTTGCAGGTGAGGGCACAGACCCCTGTGCAGATGTGCTGGAGCTGCAGTGCAGTGGGATGCCCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669177.1 |
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| CDS CAA 90 bp | TCAATGGCTCTGGATCCTGCTCCAAGCCAGACCACACCCGTGGCCTaGCCAGAGGAGAGAACCCACCTGCCCCTCCTCTCCCAACAACAA | + |
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Preference number: 6 (lower is better) Translates to: SMALDPAPSQTTPVA*PEERTHLPLLSQQQ Trigger: TTGTTGTTGGGAGAGGAGGGGCAGGTGGGTTCTCTCCTCTGGCAAGGCCACGGGTGTGGTCTGGCTTGGAGCAGGATCCAGAGCCATTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669177.1 |
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| CDS CCA 72 bp | GCCGGCTCAGAATCTGACCACATAAATCCGAGCCACTaGCTCACTAAAGGCCACCTGGAAGGCAGGGACTGC | + |
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Preference number: 6 (lower is better) Translates to: AGSESDHINPSH*LTKGHLEGRDC Trigger: GCAGTCCCTGCCTTCCAGGTGGCCTTTAGTGAGCCAGTGGCTCGGATTTATGTGGTCAGATTCTGAGCCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669177.1 |
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| CDS TCA 72 bp | GCCTGGTACTGTCTCAAGACTGCAGGCACTGAAACGTaGCCCCGGTGTCTCAGGCTGAAACAGCAAACTCCC | + |
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Preference number: 6 (lower is better) Translates to: AWYCLKTAGTET*PRCLRLKQQTP Trigger: GGGAGTTTGCTGTTTCAGCCTGAGACACCGGGGTCACGTTTCAGTGCCTGCAGTCTTGAGACAGTACCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000655659.1 ENST00000661526.1 ENST00000662378.1 ENST00000663447.1 ENST00000664781.1 ENST00000668813.1 |
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| CDS TCA 72 bp | CCCAGATGCCTGGTACTGTCTCAAGACTGCAGGCACTaGAACGTGACCCCGGTGTCTCAGGCTGAAACAGCA | + |
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Preference number: 6 (lower is better) Translates to: PRCLVLSQDCRH*NVTPVSQAETA Trigger: TGCTGTTTCAGCCTGAGACACCGGGGTCACGTTTCAGTGCCTGCAGTCTTGAGACAGTACCAGGCATCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000655659.1 ENST00000661526.1 ENST00000662378.1 ENST00000663447.1 ENST00000664781.1 ENST00000668813.1 |
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| CDS TCA 72 bp | CTTCTCATCGTGCAGCTCGCCATCTCCACGTGCCTTTaGCTTCCAGGCATCTCAGCACTAAGTCAGGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: LLIVQLAISTCL*LPGISALSQEP Trigger: GGGCTCCTGACTTAGTGCTGAGATGCCTGGAAGTCAAAGGCACGTGGAGATGGCGAGCTGCACGATGAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669177.1 |
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| CDS CCA 72 bp | GGTTTTCCTATGGAGAAGGATCCCCCTGTGTGGGACTaGCATCCTCTGAGGACTGCAGGACTGTACCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: GFPMEKDPPVWD*HPLRTAGLYLG Trigger: ACCCAGGTACAGTCCTGCAGTCCTCAGAGGATGCCAGTCCCACACAGGGGGATCCTTCTCCATAGGAAAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000612554.2 ENST00000655659.1 ENST00000661526.1 ENST00000662378.1 ENST00000663447.1 ENST00000664781.1 ENST00000668813.1 |
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| CDS CCA 72 bp | CCTACACAGAATCTCCAGTCCTGCCACACCTCTCGCTaGCTTGTCCTTGTGTCTGCCGGCTCAGAATCTGAC | + |
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Preference number: 6 (lower is better) Translates to: PTQNLQSCHTSR*LVLVSAGSESD Trigger: GTCAGATTCTGAGCCGGCAGACACAAGGACAAGCCAGCGAGAGGTGTGGCAGGACTGGAGATTCTGTGTAGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664781.1 ENST00000669177.1 |
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| CDS TCA 72 bp | GTGGTTTTCGGAGTTCGTCCTGGAGAAGGGCTAGGTTaGTCTGTCTCCTCAGAGCAGACTGCACAGCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: VVFGVRPGEGLG*SVSSEQTAQPS Trigger: GGAAGGCTGTGCAGTCTGCTCTGAGGAGACAGATCAACCTAGCCCTTCTCCAGGACGAACTCCGAAAACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000612554.2 ENST00000655659.1 ENST00000662378.1 ENST00000664781.1 |
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| CDS GCA 72 bp | CCCATCACATACAGACCTACACAGAATCTCCAGTCCTaGCACACCTCTCGCTGGCTTGTCCTTGTGTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PITYRPTQNLQS*HTSRWLVLVSA Trigger: GGCAGACACAAGGACAAGCCAGCGAGAGGTGTGGCAGGACTGGAGATTCTGTGTAGGTCTGTATGTGATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664781.1 ENST00000669177.1 |
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| CDS GCA 72 bp | CTTCATAGTTCCTCAGAGTTCAATGGCTCTGGATCCTaGTCCAAGCCAGACCACACCCGTGGCCTTGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: LHSSSEFNGSGS*SKPDHTRGLAR Trigger: TCTGGCAAGGCCACGGGTGTGGTCTGGCTTGGAGCAGGATCCAGAGCCATTGAACTCTGAGGAACTATGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669177.1 |
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| CDS CCA 72 bp | TGCACCTCGAACCTGCATTGTTCCTCGGTTTTCCTATaGAGAAGGATCCCCCTGTGTGGGACTGGCATCCTC | + |
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Preference number: 6 (lower is better) Translates to: CTSNLHCSSVFL*RRIPLCGTGIL Trigger: GAGGATGCCAGTCCCACACAGGGGGATCCTTCTCCATAGGAAAACCGAGGAACAATGCAGGTTCGAGGTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000612554.2 ENST00000655659.1 ENST00000661526.1 ENST00000662378.1 ENST00000663447.1 ENST00000664781.1 ENST00000668813.1 |
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| CDS CCA 72 bp | ACTACACAGAATCTCCAGTCCTGCCACACCTCTCGCTaGCTTGTCCTTGTGTCTGCCGGCTCAGAATCTGAC | + |
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Preference number: 6 (lower is better) Translates to: TTQNLQSCHTSR*LVLVSAGSESD Trigger: GTCAGATTCTGAGCCGGCAGACACAAGGACAAGCCAGCGAGAGGTGTGGCAGGACTGGAGATTCTGTGTAGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000612554.2 ENST00000662378.1 |
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| CDS CAA 72 bp | AGTGATCCCTGGAACCAGGCCCGCCTTGTGCCAGTTTaGGAATTTCATTGCCGCGTAGCTACCGTATTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SDPWNQARLVPV*EFHCRVATVLG Trigger: GCCCAATACGGTAGCTACGCGGCAATGAAATTCCAAAACTGGCACAAGGCGGGCCTGGTTCCAGGGATCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000612554.2 ENST00000655659.1 |
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| CDS CAA 90 bp | TGGTGGGAGGTGTCTGGGTCATGGAGCAGTTCCCTCATGCGTGACTaGCTGCTGCGGGAGAGCTGCTTATTAAAGAGTCTGAAACCTCTC | + |
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Preference number: 6 (lower is better) Translates to: WWEVSGSWSSSLMRD*LLRESCLLKSLKPL Trigger: GAGAGGTTTCAGACTCTTTAATAAGCAGCTCTCCCGCAGCAGCAAGTCACGCATGAGGGAACTGCTCCATGACCCAGACACCTCCCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668813.1 |
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| CDS GCA 72 bp | GGGGACAACACGGAGGAGGGAGATTTTTCTATTCAGTaGCCAGTTGACTCCACCGCTGAGGGCCAGTATAGT | + |
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Preference number: 6 (lower is better) Translates to: GDNTEEGDFSIQ*PVDSTAEGQYS Trigger: ACTATACTGGCCCTCAGCGGTGGAGTCAACTGGGCACTGAATAGAAAAATCTCCCTCCTCCGTGTTGTCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663447.1 |
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| CDS CCA 72 bp | GCCGGCTCAGAATCTGACCACATAAATCCGAGCCACTaGCTCACTAAAGGCCACCTGATTCTGAGATGCGTC | + |
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Preference number: 6 (lower is better) Translates to: AGSESDHINPSH*LTKGHLILRCV Trigger: GACGCATCTCAGAATCAGGTGGCCTTTAGTGAGCCAGTGGCTCGGATTTATGTGGTCAGATTCTGAGCCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000612554.2 ENST00000662378.1 ENST00000664781.1 |
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| CDS CCA 72 bp | ATTGGCCTGGTGTCAAGCCCTTTGGAAGTGTTCCACTaGCCTGTAGCCCCACAAGTTTCGTGGAAATCCTGG | + |
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Preference number: 6 (lower is better) Translates to: IGLVSSPLEVFH*PVAPQVSWKSW Trigger: CCAGGATTTCCACGAAACTTGTGGGGCTACAGGCCAGTGGAACACTTCCAAAGGGCTTGACACCAGGCCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662378.1 |
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| CDS CAA 72 bp | TGTGGTTTTCGGAGTTCGTCCTGGAGAAGGGCTAGGTaGATCTGTCTCCTCAGAGCAGACTGCACAGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: CGFRSSSWRRAR*ICLLRADCTAF Trigger: GAAGGCTGTGCAGTCTGCTCTGAGGAGACAGATCAACCTAGCCCTTCTCCAGGACGAACTCCGAAAACCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000612554.2 ENST00000655659.1 ENST00000662378.1 ENST00000664781.1 |
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| CDS CAA 72 bp | TGGAAATCCTGGAACCAGGCCCGCCTTGTGCCAGTTTaGGAATTTCATTGCCGCGTAGCTACCGTATTGGGC | + |
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Preference number: 6 (lower is better) Translates to: WKSWNQARLVPV*EFHCRVATVLG Trigger: GCCCAATACGGTAGCTACGCGGCAATGAAATTCCAAAACTGGCACAAGGCGGGCCTGGTTCCAGGATTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662378.1 |
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| CDS CAA 72 bp | GTGTCTGGGTCATGGAGCAGTTCCCTCATGCGTGACTaGCTGCTGCGGGAGAGCTGCTTATTAAAGAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: VSGSWSSSLMRD*LLRESCLLKSL Trigger: CAGACTCTTTAATAAGCAGCTCTCCCGCAGCAGCAAGTCACGCATGAGGGAACTGCTCCATGACCCAGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668813.1 |
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| CDS TCA 72 bp | GGAGGCACAGAAGGTCTGGTTGTCTCCCTTTTGGGGTaGTGGTTGCCCGGAGTATGGTTTACTCTTAACTCC | + |
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Preference number: 6 (lower is better) Translates to: GGTEGLVVSLLG*WLPGVWFTLNS Trigger: GGAGTTAAGAGTAAACCATACTCCGGGCAACCATCACCCCAAAAGGGAGACAACCAGACCTTCTGTGCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661526.1 |
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| CDS GCA 72 bp | GGACTGAGTGTGCTTAGCCACTGTGCACCTCGAACCTaGATTGTTCCTCGGTTTTCCTATGGAGAAGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: GLSVLSHCAPRT*IVPRFSYGEGS Trigger: GGATCCTTCTCCATAGGAAAACCGAGGAACAATGCAGGTTCGAGGTGCACAGTGGCTAAGCACACTCAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000612554.2 ENST00000655659.1 ENST00000661526.1 ENST00000662378.1 ENST00000663447.1 ENST00000664781.1 ENST00000668813.1 |
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| CDS GCA 72 bp | AGAAGGGCTAGGTTGATCTGTCTCCTCAGAGCAGACTaGACAGCCTTCCCGAAGAAAAACATGCAGGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RRARLICLLRAD*TAFPKKNMQGL Trigger: AAGGCCCTGCATGTTTTTCTTCGGGAAGGCTGTGCAGTCTGCTCTGAGGAGACAGATCAACCTAGCCCTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000612554.2 ENST00000655659.1 ENST00000662378.1 ENST00000664781.1 |
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| CDS GCA 72 bp | CACTGGCTCACTAAAGGCCACCTGGAAGGCAGGGACTaGATTGAATGGGATCTACATCAGGCTAGTGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: HWLTKGHLEGRD*IEWDLHQASVT Trigger: AGTGACACTAGCCTGATGTAGATCCCATTCAATGCAGTCCCTGCCTTCCAGGTGGCCTTTAGTGAGCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669177.1 |
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| CDS CAA 72 bp | GAACCAGGCCCGCCTTGTGCCAGTTTTGGAATTTCATaGCCGCGTAGCTACCGTATTGGGCAAATTAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: EPGPPCASFGIS*PRSYRIGQIST Trigger: GGTGCTAATTTGCCCAATACGGTAGCTACGCGGCAATGAAATTCCAAAACTGGCACAAGGCGGGCCTGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000612554.2 ENST00000655659.1 ENST00000662378.1 |
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| CDS CAA 72 bp | GGCTCACTAAAGGCCACCTGGAAGGCAGGGACTGCATaGAATGGGATCTACATCAGGCTAGTGTCACTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSLKATWKAGTA*NGIYIRLVSLR Trigger: CCTAAGTGACACTAGCCTGATGTAGATCCCATTCAATGCAGTCCCTGCCTTCCAGGTGGCCTTTAGTGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669177.1 |
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| CDS CAA 90 bp | GTGAATTCCTGTGGTTTTCGGAGTTCGTCCTGGAGAAGGGCTAGGTaGATCTGTCTCCTCAGAGCAGACTGCACAGCCTTCCCGAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: VNSCGFRSSSWRRAR*ICLLRADCTAFPKK Trigger: TTTCTTCGGGAAGGCTGTGCAGTCTGCTCTGAGGAGACAGATCAACCTAGCCCTTCTCCAGGACGAACTCCGAAAACCACAGGAATTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000612554.2 ENST00000655659.1 ENST00000662378.1 ENST00000664781.1 |
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| CDS CAA 90 bp | GAAATCCTGGAACCAGGCCCGCCTTGTGCCAGTTTTGGAATTTCATaGCCGCGTAGCTACCGTATTGGGCAAATTAGCACCAGATCGACC | + |
|
Preference number: 6 (lower is better) Translates to: EILEPGPPCASFGIS*PRSYRIGQISTRST Trigger: GGTCGATCTGGTGCTAATTTGCCCAATACGGTAGCTACGCGGCAATGAAATTCCAAAACTGGCACAAGGCGGGCCTGGTTCCAGGATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662378.1 |
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| CDS CAA 90 bp | GTGGTGTTGAATGTGGACTTTCATTGGGAGGCACAGAAGGTCTGGTaGTCTCCCTTTTGGGGTGATGGTTGCCCGGAGTATGGTTTACTC | + |
|
Preference number: 6 (lower is better) Translates to: VVLNVDFHWEAQKVW*SPFWGDGCPEYGLL Trigger: GAGTAAACCATACTCCGGGCAACCATCACCCCAAAAGGGAGACAACCAGACCTTCTGTGCCTCCCAATGAAAGTCCACATTCAACACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661526.1 |
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| CDS GCA 72 bp | AACCAGGCCCGCCTTGTGCCAGTTTTGGAATTTCATTaGCGCGTAGCTACCGTATTGGGCAAATTAGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: NQARLVPVLEFH*RVATVLGKLAP Trigger: TGGTGCTAATTTGCCCAATACGGTAGCTACGCGGCAATGAAATTCCAAAACTGGCACAAGGCGGGCCTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000612554.2 ENST00000655659.1 ENST00000662378.1 |
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| CDS CCA 72 bp | CAGACTCTGTGCTGCTTCTGCTTTATACACAGGCCCTaGCTGAAAACCCTTGACTTTACCAGGCATGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: QTLCCFCFIHRP*LKTLDFTRHAR Trigger: CCTTGCATGCCTGGTAAAGTCAAGGGTTTTCAGCCAGGGCCTGTGTATAAAGCAGAAGCAGCACAGAGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000655659.1 ENST00000661526.1 ENST00000662378.1 ENST00000663447.1 ENST00000664781.1 ENST00000668813.1 |
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| CDS CCA 72 bp | CATTGGGAGGCACAGAAGGTCTGGTTGTCTCCCTTTTaGGGTGATGGTTGCCCGGAGTATGGTTTACTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: HWEAQKVWLSPF*GDGCPEYGLLL Trigger: TAAGAGTAAACCATACTCCGGGCAACCATCACCCCAAAAGGGAGACAACCAGACCTTCTGTGCCTCCCAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661526.1 |
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| CDS CAA 72 bp | AATGTGGACTTTCATTGGGAGGCACAGAAGGTCTGGTaGTCTCCCTTTTGGGGTGATGGTTGCCCGGAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: NVDFHWEAQKVW*SPFWGDGCPEY Trigger: ATACTCCGGGCAACCATCACCCCAAAAGGGAGACAACCAGACCTTCTGTGCCTCCCAATGAAAGTCCACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661526.1 |
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| CDS CAA 90 bp | TTTAGATCCAGTGATCCCTGGAACCAGGCCCGCCTTGTGCCAGTTTaGGAATTTCATTGCCGCGTAGCTACCGTATTGGGCAAATTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: FRSSDPWNQARLVPV*EFHCRVATVLGKLA Trigger: TGCTAATTTGCCCAATACGGTAGCTACGCGGCAATGAAATTCCAAAACTGGCACAAGGCGGGCCTGGTTCCAGGGATCACTGGATCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000612554.2 ENST00000655659.1 |
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| CDS CAA 90 bp | CAAGTTTCGTGGAAATCCTGGAACCAGGCCCGCCTTGTGCCAGTTTaGGAATTTCATTGCCGCGTAGCTACCGTATTGGGCAAATTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QVSWKSWNQARLVPV*EFHCRVATVLGKLA Trigger: TGCTAATTTGCCCAATACGGTAGCTACGCGGCAATGAAATTCCAAAACTGGCACAAGGCGGGCCTGGTTCCAGGATTTCCACGAAACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662378.1 |
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| CDS CCA 72 bp | GAGCCTGCGGCTCGATTTTCCAGTAAGCTGAGAGCATaGAGAACACCAGAAAGCCATTTCGGTTTCTGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: EPAARFSSKLRA*RTPESHFGFCL Trigger: TAAGCAGAAACCGAAATGGCTTTCTGGTGTTCTCCATGCTCTCAGCTTACTGGAAAATCGAGCCGCAGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000612554.2 ENST00000655659.1 ENST00000661526.1 ENST00000662378.1 ENST00000663447.1 ENST00000664781.1 ENST00000668813.1 |
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| CDS CCA 72 bp | TTGAACGTGAATTCCTGTGGTTTTCGGAGTTCGTCCTaGAGAAGGGCTAGGTTGATCTGTCTCCTCAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LNVNSCGFRSSS*RRARLICLLRA Trigger: TGCTCTGAGGAGACAGATCAACCTAGCCCTTCTCCAGGACGAACTCCGAAAACCACAGGAATTCACGTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000612554.2 ENST00000655659.1 ENST00000662378.1 ENST00000664781.1 |
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| CDS CCA 72 bp | ATCAATGATGACAGTGTTCTAAGAAGGCCATTGGCCTaGTGTCAAGCCCTTTGGAAGTGTTCCACTGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: INDDSVLRRPLA*CQALWKCSTGL Trigger: CAGGCCAGTGGAACACTTCCAAAGGGCTTGACACCAGGCCAATGGCCTTCTTAGAACACTGTCATCATTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662378.1 |
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| CDS TCA 72 bp | GTAGCATTAGCATTTGAGAGGAAAGATCTTGAGGACTaGGTGTGCTTAGCCACTGTGCACCTCGAACCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VALAFERKDLED*VCLATVHLEPA Trigger: TGCAGGTTCGAGGTGCACAGTGGCTAAGCACACTCAGTCCTCAAGATCTTTCCTCTCAAATGCTAATGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000612554.2 ENST00000655659.1 ENST00000661526.1 ENST00000662378.1 ENST00000663447.1 ENST00000664781.1 ENST00000668813.1 |
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| CDS TCA 72 bp | AGGTCATCACCAGCACCTCTCCCAGAGTTTAGTTCATaGGTTTGCATGGCCTGGAGTTTCTCTCTGAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RSSPAPLPEFSS*VCMAWSFSLKL Trigger: AAGCTTCAGAGAGAAACTCCAGGCCATGCAAACTCATGAACTAAACTCTGGGAGAGGTGCTGGTGATGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669177.1 |
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| CDS GCA 72 bp | ATTTTCCTAAAATTCACTACACAGAATCTCCAGTCCTaGCACACCTCTCGCTGGCTTGTCCTTGTGTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: IFLKFTTQNLQS*HTSRWLVLVSA Trigger: GGCAGACACAAGGACAAGCCAGCGAGAGGTGTGGCAGGACTGGAGATTCTGTGTAGTGAATTTTAGGAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000612554.2 ENST00000662378.1 |
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| CDS CCA 72 bp | CCCGTTGCAGGCGAGTTCCAAGCACAGAGAACCAAATaGTTTCCACAGAGAACATGTGTAGAAGGGATTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PVAGEFQAQRTK*FPQRTCVEGIV Trigger: TACAATCCCTTCTACACATGTTCTCTGTGGAAACCATTTGGTTCTCTGTGCTTGGAACTCGCCTGCAACGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000655659.1 ENST00000661526.1 ENST00000662378.1 ENST00000663447.1 ENST00000664781.1 ENST00000668813.1 |
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| CDS CAA 72 bp | CCAGTTTTGGAATTTCATTGCCGCGTAGCTACCGTATaGGGCAAATTAGCACCAGATCGACCATCTGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PVLEFHCRVATV*GKLAPDRPSAL Trigger: GAGAGCAGATGGTCGATCTGGTGCTAATTTGCCCAATACGGTAGCTACGCGGCAATGAAATTCCAAAACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000612554.2 ENST00000655659.1 ENST00000662378.1 |
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| CDS TCA 72 bp | AGCCATCCATCGTCTGACCCCGTAAATTTGTCTTTCTaGGGTAATAAGATGACACAGCCTTTGCCAGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SHPSSDPVNLSF*GNKMTQPLPGQ Trigger: CTGACCTGGCAAAGGCTGTGTCATCTTATTACCTCAGAAAGACAAATTTACGGGGTCAGACGATGGATGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000655659.1 ENST00000661526.1 ENST00000662378.1 ENST00000663447.1 ENST00000664781.1 ENST00000668813.1 |
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| CDS TCA 72 bp | TACCATCTTGAACGGAGCAAAAGATGGCTCATATGTTaGCAGCTCCCAATCCCCCACTTCTGGAGCAGATTT | + |
|
Preference number: 6 (lower is better) Translates to: YHLERSKRWLIC*QLPIPHFWSRF Trigger: AAATCTGCTCCAGAAGTGGGGGATTGGGAGCTGTCAACATATGAGCCATCTTTTGCTCCGTTCAAGATGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000655659.1 ENST00000661526.1 ENST00000662378.1 ENST00000663447.1 ENST00000664781.1 ENST00000668813.1 |
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| CDS GCA 72 bp | CTGCGATGTGTTTGTCAAAGAGTTTACTTAGAGAGCTaGAGAGCTATCAGAGAGGAGAAGAGAAGCGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: LRCVCQRVYLES*RAIREEKRSAS Trigger: CGAAGCGCTTCTCTTCTCCTCTCTGATAGCTCTGCAGCTCTCTAAGTAAACTCTTTGACAAACACATCGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663447.1 |
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| CDS GCA 72 bp | GCCTTCCTCCAACAGTCTCATGAACATTTTAAGATTTaGTTGCCTGAACTGGGATCCCAACGAGGTCTACAC | + |
|
Preference number: 6 (lower is better) Translates to: AFLQQSHEHFKI*LPELGSQRGLH Trigger: GTGTAGACCTCGTTGGGATCCCAGTTCAGGCAAGCAAATCTTAAAATGTTCATGAGACTGTTGGAGGAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661526.1 |
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| CDS CCA 72 bp | TCTTCCTTGAGCTTCAGCAATGACGCCCACTTTTCATaGATTGTTACTCAGGGAGGACGCATAAATGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSLSFSNDAHFS*IVTQGGRINAS Trigger: AGAGGCATTTATGCGTCCTCCCTGAGTAACAATCCATGAAAAGTGGGCGTCATTGCTGAAGCTCAAGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000655659.1 ENST00000661526.1 ENST00000662378.1 ENST00000663447.1 ENST00000664781.1 ENST00000668813.1 |
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| CDS CCA 72 bp | TCTGAGGTCTATAAGGGAAGCTCTGTTCCAAATAGATaGCCGTCTCCTTCCTGTGTCTCTTCACACAACCTT | + |
|
Preference number: 6 (lower is better) Translates to: SEVYKGSSVPNR*PSPSCVSSHNL Trigger: AAGGTTGTGTGAAGAGACACAGGAAGGAGACGGCCATCTATTTGGAACAGAGCTTCCCTTATAGACCTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669177.1 |
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| CDS TCA 72 bp | TTGGTGTCTTTGGTAAGAATCCTTCGTAGGTGGTGTTaGATGTGGACTTTCATTGGGAGGCACAGAAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LVSLVRILRRWC*MWTFIGRHRRS Trigger: AGACCTTCTGTGCCTCCCAATGAAAGTCCACATTCAACACCACCTACGAAGGATTCTTACCAAAGACACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661526.1 |
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| CDS GCA 72 bp | AGATTTTCCAGGGGGAAGGACATTACAGAGTCCAGATaGCTCTTCCATGATTCCAGCACCTCTAATGTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: RFSRGKDITESR*LFHDSSTSNVV Trigger: TACAACATTAGAGGTGCTGGAATCATGGAAGAGGCATCTGGACTCTGTAATGTCCTTCCCCCTGGAAAATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000655659.1 ENST00000661526.1 ENST00000662378.1 ENST00000663447.1 ENST00000664781.1 ENST00000668813.1 |
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| CDS GCA 72 bp | TTCCTGAGGCCTCTCCAGAAGCAGTTCCTGACACTATaGTTCTTGTACAGTCTTTCATTTTTCTTGGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FLRPLQKQFLTL*FLYSLSFFLAS Trigger: AGAGGCCAAGAAAAATGAAAGACTGTACAAGAAGCATAGTGTCAGGAACTGCTTCTGGAGAGGCCTCAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668813.1 |
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| CDS CAA 72 bp | GTCTCAGACATGTTTCCACTCGCTGCTGCGATGTGTTaGTCAAAGAGTTTACTTAGAGAGCTGCAGAGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: VSDMFPLAAAMC*SKSLLRELQSY Trigger: ATAGCTCTGCAGCTCTCTAAGTAAACTCTTTGACAAACACATCGCAGCAGCGAGTGGAAACATGTCTGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663447.1 |
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| CDS CAA 72 bp | TACAGAATCAATGATGACAGTGTTCTAAGAAGGCCATaGGCCTGGTGTCAAGCCCTTTGGAAGTGTTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: YRINDDSVLRRP*AWCQALWKCST Trigger: AGTGGAACACTTCCAAAGGGCTTGACACCAGGCCAATGGCCTTCTTAGAACACTGTCATCATTGATTCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662378.1 |
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| CDS CAA 90 bp | GTGTTTGCCTTCCTCCAACAGTCTCATGAACATTTTAAGATTTGCTaGCCTGAACTGGGATCCCAACGAGGTCTACACTTTGTTCTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: VFAFLQQSHEHFKIC*PELGSQRGLHFVLN Trigger: GTTCAGAACAAAGTGTAGACCTCGTTGGGATCCCAGTTCAGGCAAGCAAATCTTAAAATGTTCATGAGACTGTTGGAGGAAGGCAAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661526.1 |
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| CDS TCA 72 bp | GATTTGAACCTGAGTCGTTACAGTGCCTCTTGCCAATaGGTCGTTTTGTTTTCTGAAATCTCAAGGGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: DLNLSRYSASCQ*VVLFSEISRVG Trigger: CCCAACCCTTGAGATTTCAGAAAACAAAACGACTCATTGGCAAGAGGCACTGTAACGACTCAGGTTCAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000612554.2 ENST00000655659.1 |
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| CDS TCA 72 bp | TTTCTTAGGATGCCATGGCAAAGCCCCGCAGACTGGTaGGCCTTAAATAACAGGAATTTATTGTCTCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: FLRMPWQSPADW*ALNNRNLLSHS Trigger: ACTGTGAGACAATAAATTCCTGTTATTTAAGGCTCACCAGTCTGCGGGGCTTTGCCATGGCATCCTAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669177.1 |
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| CDS CAA 72 bp | TTCCTCCAACAGTCTCATGAACATTTTAAGATTTGCTaGCCTGAACTGGGATCCCAACGAGGTCTACACTTT | + |
|
Preference number: 6 (lower is better) Translates to: FLQQSHEHFKIC*PELGSQRGLHF Trigger: AAAGTGTAGACCTCGTTGGGATCCCAGTTCAGGCAAGCAAATCTTAAAATGTTCATGAGACTGTTGGAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661526.1 |
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| CDS CCA 72 bp | AATAACAGGAATTTATTGTCTCACAGTTCTGGAGTCTaGAAGCCCAAAACCAAGGTATCAGAGTTGGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: NNRNLLSHSSGV*KPKTKVSELVP Trigger: AGGAACCAACTCTGATACCTTGGTTTTGGGCTTCCAGACTCCAGAACTGTGAGACAATAAATTCCTGTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669177.1 |
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| CDS CAA 90 bp | AGGGTTGGGGTTTCTGAGCCCAAACCCATAATTTCTTTTGTTTACTaGCTCTTTGGAATGCCAGTGGGATGCATCATTCATTGGATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: RVGVSEPKPIISFVY*LFGMPVGCIIHWIF Trigger: AAAAATCCAATGAATGATGCATCCCACTGGCATTCCAAAGAGCAAGTAAACAAAAGAAATTATGGGTTTGGGCTCAGAAACCCCAACCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000612554.2 ENST00000655659.1 |
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| CDS CAA 90 bp | ATCGACCATCTGCTCTCTAAAGTAGACACACACATGACATCACCGTaGCAGTTATCGAGTCATTTTCCTAAAATTCACTACACAGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: IDHLLSKVDTHMTSP*QLSSHFPKIHYTES Trigger: AGATTCTGTGTAGTGAATTTTAGGAAAATGACTCGATAACTGCAACGGTGATGTCATGTGTGTGTCTACTTTAGAGAGCAGATGGTCGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000612554.2 ENST00000662378.1 |
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| CDS CAA 72 bp | CTGCTCTCTAAAGTAGACACACACATGACATCACCGTaGCAGTTATCGAGTCATTTTCCTAAAATTCACTAC | + |
|
Preference number: 6 (lower is better) Translates to: LLSKVDTHMTSP*QLSSHFPKIHY Trigger: GTAGTGAATTTTAGGAAAATGACTCGATAACTGCAACGGTGATGTCATGTGTGTGTCTACTTTAGAGAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000612554.2 ENST00000662378.1 |
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| CDS CAA 72 bp | GTTTCTGAGCCCAAACCCATAATTTCTTTTGTTTACTaGCTCTTTGGAATGCCAGTGGGATGCATCATTCAT | + |
|
Preference number: 6 (lower is better) Translates to: VSEPKPIISFVY*LFGMPVGCIIH Trigger: ATGAATGATGCATCCCACTGGCATTCCAAAGAGCAAGTAAACAAAAGAAATTATGGGTTTGGGCTCAGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000612554.2 ENST00000655659.1 |
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| CDS CAA 90 bp | CCCAATGCCGTGAATAAGGATATAATCAAATTTCATATTTCTTCCTaGAGCTTCAGCAATGACGCCCACTTTTCATGGATTGTTACTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PNAVNKDIIKFHISS*SFSNDAHFSWIVTQ Trigger: CTGAGTAACAATCCATGAAAAGTGGGCGTCATTGCTGAAGCTCAAGGAAGAAATATGAAATTTGATTATATCCTTATTCACGGCATTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000655659.1 ENST00000661526.1 ENST00000662378.1 ENST00000663447.1 ENST00000664781.1 ENST00000668813.1 |
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| CDS TCA 72 bp | GAGTTTCTCTCTGAAGCTTTTGCTGTACATACATACTaGGGAAGAGAGCAGAAAAATTCTGAAACACGTATC | + |
|
Preference number: 6 (lower is better) Translates to: EFLSEAFAVHTY*GREQKNSETRI Trigger: GATACGTGTTTCAGAATTTTTCTGCTCTCTTCCTCAGTATGTATGTACAGCAAAAGCTTCAGAGAGAAACTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669177.1 |
||
| CDS GCA 72 bp | CTTTTCATGGATTGTTACTCAGGGAGGACGCATAAATaGCTCTCAGAATCACCTAATTCAATCTTCATAACA | + |
|
Preference number: 6 (lower is better) Translates to: LFMDCYSGRTHK*LSESPNSIFIT Trigger: TGTTATGAAGATTGAATTAGGTGATTCTGAGAGGCATTTATGCGTCCTCCCTGAGTAACAATCCATGAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000655659.1 ENST00000661526.1 ENST00000662378.1 ENST00000663447.1 ENST00000664781.1 ENST00000668813.1 |
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