Pregenerated sensors for LINC01619 (Homo sapiens)
Ensembl gene IDs: ENSG00000257242Ensembl transcript IDs: ENST00000546975.4, ENST00000548552.2, ENST00000549802.5, ENST00000551306.1, ENST00000551563.6, ENST00000551764.5, ENST00000551843.5, ENST00000552106.5, ENST00000552277.3, ENST00000553207.5, ENST00000664336.1, ENST00000671521.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTCCCAGGTCAATTGCAATCTCAGGACATGTTTGTCACTCCCACCTaGTGGGCCCCCAGATGTTTCCATCTGAAGCCACGTGAATATGTC | + |
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Preference number: 5 (lower is better) Translates to: FPGQLQSQDMFVTPT*WAPRCFHLKPREYV Trigger: GACATATTCACGTGGCTTCAGATGGAAACATCTGGGGGCCCATCAGGTGGGAGTGACAAACATGTCCTGAGATTGCAATTGACCTGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664336.1 |
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| CDS TCA 90 bp | CTGTCAGGGTGGTGTGGACAATGGAGGCTGAACATGTCAATGACATaGCAAATTCCTCGAGCAGAGTGCCAGATGTATTGTTGCCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: LSGWCGQWRLNMSMT*QIPRAECQMYCCPG Trigger: TCCTGGGCAACAATACATCTGGCACTCTGCTCGAGGAATTTGTCATGTCATTGACATGTTCAGCCTCCATTGTCCACACCACCCTGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671521.1 |
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| CDS CCA 90 bp | CCCACCGTATCTTCACATAGTCAGAGGTCTGCTGTCAGGGTGGTGTaGACAATGGAGGCTGAACATGTCAATGACATGACAAATTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: PTVSSHSQRSAVRVV*TMEAEHVNDMTNSS Trigger: CGAGGAATTTGTCATGTCATTGACATGTTCAGCCTCCATTGTCCACACCACCCTGACAGCAGACCTCTGACTATGTGAAGATACGGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671521.1 |
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| CDS GCA 90 bp | TGTGACGTTATTAATGTGCATGCTCATCAACCTTCCCAGGTCAATTaGAATCTCAGGACATGTTTGTCACTCCCACCTGATGGGCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: CDVINVHAHQPSQVN*NLRTCLSLPPDGPP Trigger: TGGGGGCCCATCAGGTGGGAGTGACAAACATGTCCTGAGATTGCAATTGACCTGGGAAGGTTGATGAGCATGCACATTAATAACGTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664336.1 |
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| CDS CCA 90 bp | CTCAACTACGGAAGGATCCACTTCCAGGCTCACTCATGTAACTGTTaGCAGACTTCAGTCCTTGCTGGATGTTGTCTGGAGACATCAGTT | + |
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Preference number: 5 (lower is better) Translates to: LNYGRIHFQAHSCNC*QTSVLAGCCLETSV Trigger: AACTGATGTCTCCAGACAACATCCAGCAAGGACTGAAGTCTGCCAACAGTTACATGAGTGAGCCTGGAAGTGGATCCTTCCGTAGTTGAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552277.3 |
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| CDS TCA 90 bp | CTCTGTGAGTGCCAAATTTGCCAGCCTCCTTCTGACACCTTGTCATaGACCAATAACAAGCAGTTTGCAGATCAAACTCATCCATGGACC | + |
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Preference number: 5 (lower is better) Translates to: LCECQICQPPSDTLS*TNNKQFADQTHPWT Trigger: GGTCCATGGATGAGTTTGATCTGCAAACTGCTTGTTATTGGTTCATGACAAGGTGTCAGAAGGAGGCTGGCAAATTTGGCACTCACAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000549802.5 ENST00000671521.1 |
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| CDS TCA 90 bp | CATTGCAGAGAGCAGCAGGCCAGTGTTGTCTTTGTTTCTCTTTCCTaGGGCTTCCTAGAAGTCATCACAATCTCCAATTTATCCAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: HCREQQASVVFVSLS*GFLEVITISNLSRL Trigger: CAGCCTGGATAAATTGGAGATTGTGATGACTTCTAGGAAGCCTCAGGAAAGAGAAACAAAGACAACACTGGCCTGCTGCTCTCTGCAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000546975.4 ENST00000549802.5 ENST00000551563.6 ENST00000551843.5 ENST00000552106.5 ENST00000664336.1 ENST00000671521.1 |
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| CDS TCA 90 bp | CCAACAGTGAGCCAAACGGACAAAGATGCTTGCTCTCATGGACATTaGCTGGGTGGCTTGAACAGCAGACATTCATTTCTCATGGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: PTVSQTDKDACSHGH*LGGLNSRHSFLMVL Trigger: AAGAACCATGAGAAATGAATGTCTGCTGTTCAAGCCACCCAGTCAATGTCCATGAGAGCAAGCATCTTTGTCCGTTTGGCTCACTGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000551764.5 ENST00000551843.5 ENST00000552106.5 ENST00000671521.1 |
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| CDS TCA 90 bp | CCATGTATGTCTCTCCTTAGCCACAACCAGCTGGCAGCAGCTGTTTaGTTTGGGACAAAAGATGTTACCTCTCTGAGCCTTGGTTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: PCMSLLSHNQLAAAV*FGTKDVTSLSLGCF Trigger: AAAACAACCAAGGCTCAGAGAGGTAACATCTTTTGTCCCAAATCAAACAGCTGCTGCCAGCTGGTTGTGGCTAAGGAGAGACATACATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552277.3 |
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| CDS GCA 90 bp | TCAATGCTCATTAAATTCATATGCGCTCTCTTGGTCAGCTGGGGCTaGCATAACAAAATACCATTGACTGGGTGGCTTGAACAGCAGACA | + |
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Preference number: 5 (lower is better) Translates to: SMLIKFICALLVSWG*HNKIPLTGWLEQQT Trigger: TGTCTGCTGTTCAAGCCACCCAGTCAATGGTATTTTGTTATGGCAGCCCCAGCTGACCAAGAGAGCGCATATGAATTTAATGAGCATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551306.1 |
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| CDS GCA 90 bp | CCCACCCATCTGCATAGAAAATCCATTTGTGTGACGTTATTAATGTaGATGCTCATCAACCTTCCCAGGTCAATTGCAATCTCAGGACAT | + |
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Preference number: 5 (lower is better) Translates to: PTHLHRKSICVTLLM*MLINLPRSIAISGH Trigger: ATGTCCTGAGATTGCAATTGACCTGGGAAGGTTGATGAGCATGCACATTAATAACGTCACACAAATGGATTTTCTATGCAGATGGGTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664336.1 |
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| CDS TCA 90 bp | ATCAAACTCATCCATGGACCACACTTTGCTAGACCACTTTCTAGATaGAGGTTTCCAAACTTTTTCTACGCTGGGCCGGGTGATATTTTT | + |
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Preference number: 5 (lower is better) Translates to: IKLIHGPHFARPLSR*RFPNFFYAGPGDIF Trigger: AAAAATATCACCCGGCCCAGCGTAGAAAAAGTTTGGAAACCTTCATCTAGAAAGTGGTCTAGCAAAGTGTGGTCCATGGATGAGTTTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551764.5 |
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| CDS TCA 90 bp | CTCTCAGATATGAAGCAACACATTACAACTGTATTAGCTGATAAGTaGACTGTGGCTGGCCCACCCATCTGCATAGAAAATCCATTTGTG | + |
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Preference number: 5 (lower is better) Translates to: LSDMKQHITTVLADK*TVAGPPICIENPFV Trigger: CACAAATGGATTTTCTATGCAGATGGGTGGGCCAGCCACAGTTCACTTATCAGCTAATACAGTTGTAATGTGTTGCTTCATATCTGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664336.1 |
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| CDS GCA 90 bp | TTCTCGTTTCTTTTGAGCCAGATTGCTCTCCTGGCTAGGGAAATATaGGGTCACTTTATTTACCAGTGTTCAGATCAAGCATTCCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: FSFLLSQIALLAREI*GHFIYQCSDQAFLS Trigger: TGAAAGGAATGCTTGATCTGAACACTGGTAAATAAAGTGACCGCATATTTCCCTAGCCAGGAGAGCAATCTGGCTCAAAAGAAACGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000546975.4 ENST00000549802.5 ENST00000551563.6 ENST00000551843.5 ENST00000552106.5 ENST00000664336.1 ENST00000671521.1 |
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| CDS GCA 72 bp | GACCCAAACCACCACATGAAGGTAGCAAGAGCAGCGTaGTTCTCATCCATGACCAGGCAGGCTAGCAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: DPNHHMKVARAA*FSSMTRQASKG Trigger: CCCTTTGCTAGCCTGCCTGGTCATGGATGAGAAGCACGCTGCTCTTGCTACCTTCATGTGGTGGTTTGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664336.1 |
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| CDS CAA 90 bp | AGATACTGGCCAATTTGGTTCCTCGGTGAGGGCTCTCTTCCTGTCTaGCGGTCAGTCATCTTCCCACCGTATCTTCACATAGTCAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: RYWPIWFLGEGSLPV*RSVIFPPYLHIVRG Trigger: ACCTCTGACTATGTGAAGATACGGTGGGAAGATGACTGACCGCAAGACAGGAAGAGAGCCCTCACCGAGGAACCAAATTGGCCAGTATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000546975.4 ENST00000549802.5 ENST00000551306.1 ENST00000551563.6 ENST00000551764.5 ENST00000551843.5 ENST00000552106.5 ENST00000552277.3 ENST00000553207.5 ENST00000671521.1 |
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| CDS CAA 90 bp | CAGGCTAGCAAAGGGAAAAGCAGAGGTGATCAGGTCTATGTCCGCTaGCTGGAATTAGTCATGGCAGAATTCAGGAAGCAAGGAGCCGTG | + |
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Preference number: 6 (lower is better) Translates to: QASKGKSRGDQVYVR*LELVMAEFRKQGAV Trigger: CACGGCTCCTTGCTTCCTGAATTCTGCCATGACTAATTCCAGCAAGCGGACATAGACCTGATCACCTCTGCTTTTCCCTTTGCTAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664336.1 |
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| CDS TCA 72 bp | CAATTGCAATCTCAGGACATGTTTGTCACTCCCACCTaGTGGGCCCCCAGATGTTTCCATCTGAAGCCACGT | + |
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Preference number: 6 (lower is better) Translates to: QLQSQDMFVTPT*WAPRCFHLKPR Trigger: ACGTGGCTTCAGATGGAAACATCTGGGGGCCCATCAGGTGGGAGTGACAAACATGTCCTGAGATTGCAATTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664336.1 |
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| CDS GCA 72 bp | GTCCTTGCTGGATGTTGTCTGGAGACATCAGTTCTCTaGCATGTATGTCTCTCCTTAGCCACAACCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VLAGCCLETSVL*HVCLSLATTSW Trigger: CCAGCTGGTTGTGGCTAAGGAGAGACATACATGGCAGAGAACTGATGTCTCCAGACAACATCCAGCAAGGAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552277.3 |
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| CDS CCA 72 bp | GGAAGGATCCACTTCCAGGCTCACTCATGTAACTGTTaGCAGACTTCAGTCCTTGCTGGATGTTGTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: GRIHFQAHSCNC*QTSVLAGCCLE Trigger: CTCCAGACAACATCCAGCAAGGACTGAAGTCTGCCAACAGTTACATGAGTGAGCCTGGAAGTGGATCCTTCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552277.3 |
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| CDS CCA 72 bp | CCCACCGTATCTTCACATAGTCAGAGGTCTAGGCTGTaGTCATCTCAAGGCTCAACTACGGAAGGATCCACT | + |
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Preference number: 6 (lower is better) Translates to: PTVSSHSQRSRL*SSQGSTTEGST Trigger: AGTGGATCCTTCCGTAGTTGAGCCTTGAGATGACCACAGCCTAGACCTCTGACTATGTGAAGATACGGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552277.3 |
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| CDS CAA 72 bp | CCAATTTGGTTCCTCGGTGAGGGCTCTCTTCCTGTCTaGCGGTCAGTCATCTTCCCACCGTATCTTCACATA | + |
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Preference number: 6 (lower is better) Translates to: PIWFLGEGSLPV*RSVIFPPYLHI Trigger: TATGTGAAGATACGGTGGGAAGATGACTGACCGCAAGACAGGAAGAGAGCCCTCACCGAGGAACCAAATTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000546975.4 ENST00000549802.5 ENST00000551306.1 ENST00000551563.6 ENST00000551764.5 ENST00000551843.5 ENST00000552106.5 ENST00000552277.3 ENST00000553207.5 ENST00000671521.1 |
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| CDS CCA 72 bp | CCGTATCTTCACATAGTCAGAGGTCTGCTGTCAGGGTaGTGTGGACAATGGAGGCTGAACATGTCAATGACA | + |
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Preference number: 6 (lower is better) Translates to: PYLHIVRGLLSG*CGQWRLNMSMT Trigger: TGTCATTGACATGTTCAGCCTCCATTGTCCACACCACCCTGACAGCAGACCTCTGACTATGTGAAGATACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671521.1 |
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| CDS CAA 72 bp | AGGCTCACTCATGTAACTGTTGGCAGACTTCAGTCCTaGCTGGATGTTGTCTGGAGACATCAGTTCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: RLTHVTVGRLQS*LDVVWRHQFSA Trigger: GGCAGAGAACTGATGTCTCCAGACAACATCCAGCAAGGACTGAAGTCTGCCAACAGTTACATGAGTGAGCCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552277.3 |
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| CDS CCA 72 bp | ACTGTTGGCAGACTTCAGTCCTTGCTGGATGTTGTCTaGAGACATCAGTTCTCTGCCATGTATGTCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: TVGRLQSLLDVV*RHQFSAMYVSP Trigger: AGGAGAGACATACATGGCAGAGAACTGATGTCTCCAGACAACATCCAGCAAGGACTGAAGTCTGCCAACAGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552277.3 |
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| CDS CAA 72 bp | AGCCAAAGGCTTAGGAGCAGCCTGGCAGTAATGTCATaGTTCTCGTTTCTTTTGAGCCAGATTGCTCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: SQRLRSSLAVMS*FSFLLSQIALL Trigger: CAGGAGAGCAATCTGGCTCAAAAGAAACGAGAACAATGACATTACTGCCAGGCTGCTCCTAAGCCTTTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000546975.4 ENST00000549802.5 ENST00000551563.6 ENST00000551843.5 ENST00000552106.5 ENST00000664336.1 ENST00000671521.1 |
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| CDS CAA 90 bp | AGGCTTAGGAGCAGCCTGGCAGTAATGTCATTGTTCTCGTTTCTTTaGAGCCAGATTGCTCTCCTGGCTAGGGAAATATGCGGTCACTTT | + |
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Preference number: 6 (lower is better) Translates to: RLRSSLAVMSLFSFL*SQIALLAREICGHF Trigger: AAAGTGACCGCATATTTCCCTAGCCAGGAGAGCAATCTGGCTCAAAAGAAACGAGAACAATGACATTACTGCCAGGCTGCTCCTAAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000546975.4 ENST00000549802.5 ENST00000551563.6 ENST00000551843.5 ENST00000552106.5 ENST00000664336.1 ENST00000671521.1 |
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| CDS CAA 90 bp | GAACAGAATAGCCAAAGGCTTAGGAGCAGCCTGGCAGTAATGTCATaGTTCTCGTTTCTTTTGAGCCAGATTGCTCTCCTGGCTAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: EQNSQRLRSSLAVMS*FSFLLSQIALLARE Trigger: TTCCCTAGCCAGGAGAGCAATCTGGCTCAAAAGAAACGAGAACAATGACATTACTGCCAGGCTGCTCCTAAGCCTTTGGCTATTCTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000546975.4 ENST00000549802.5 ENST00000551563.6 ENST00000551843.5 ENST00000552106.5 ENST00000664336.1 ENST00000671521.1 |
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| CDS CAA 90 bp | GCCAGCCTCCTTCTGACACCTTGTCATGAACCAATAACAAGCAGTTaGCAGATCAAACTCATCCATGGACCACACTTTGCTAGACCACTT | + |
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Preference number: 6 (lower is better) Translates to: ASLLLTPCHEPITSS*QIKLIHGPHFARPL Trigger: AAGTGGTCTAGCAAAGTGTGGTCCATGGATGAGTTTGATCTGCAAACTGCTTGTTATTGGTTCATGACAAGGTGTCAGAAGGAGGCTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000549802.5 ENST00000671521.1 |
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| CDS TCA 72 bp | AGCCAAACGGACAAAGATGCTTGCTCTCATGGACATTaGCTGGGTGGCTTGAACAGCAGACATTCATTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SQTDKDACSHGH*LGGLNSRHSFL Trigger: GAGAAATGAATGTCTGCTGTTCAAGCCACCCAGTCAATGTCCATGAGAGCAAGCATCTTTGTCCGTTTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000551764.5 ENST00000551843.5 ENST00000552106.5 ENST00000671521.1 |
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| CDS TCA 72 bp | GGCCGGGTGATATTTTTAAAACAGGGAATCCAACAGTaGGCCAAACGGACAAAGATGCTTGCTCTCATGGAC | + |
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Preference number: 6 (lower is better) Translates to: GRVIFLKQGIQQ*AKRTKMLALMD Trigger: GTCCATGAGAGCAAGCATCTTTGTCCGTTTGGCTCACTGTTGGATTCCCTGTTTTAAAAATATCACCCGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000551764.5 ENST00000551843.5 ENST00000552106.5 ENST00000671521.1 |
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| CDS TCA 72 bp | ATCCATGGACCACACTTTGCTAGACCACTTTCTAGATaGAGGTTTCCAAACTTTTTCTACGCTGGGCCGGGT | + |
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Preference number: 6 (lower is better) Translates to: IHGPHFARPLSR*RFPNFFYAGPG Trigger: ACCCGGCCCAGCGTAGAAAAAGTTTGGAAACCTTCATCTAGAAAGTGGTCTAGCAAAGTGTGGTCCATGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551764.5 |
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| CDS CAA 72 bp | AGCAGCCTGGCAGTAATGTCATTGTTCTCGTTTCTTTaGAGCCAGATTGCTCTCCTGGCTAGGGAAATATGC | + |
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Preference number: 6 (lower is better) Translates to: SSLAVMSLFSFL*SQIALLAREIC Trigger: GCATATTTCCCTAGCCAGGAGAGCAATCTGGCTCAAAAGAAACGAGAACAATGACATTACTGCCAGGCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000546975.4 ENST00000549802.5 ENST00000551563.6 ENST00000551843.5 ENST00000552106.5 ENST00000664336.1 ENST00000671521.1 |
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| CDS CAA 72 bp | GAGCCAAACGGACAAAGATGCTTGCTCTCATGGACATaGACTGGGTGGCTTGAACAGCAGACATTCATTTCT | + |
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Preference number: 6 (lower is better) Translates to: EPNGQRCLLSWT*TGWLEQQTFIS Trigger: AGAAATGAATGTCTGCTGTTCAAGCCACCCAGTCAATGTCCATGAGAGCAAGCATCTTTGTCCGTTTGGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000551764.5 ENST00000551843.5 ENST00000552106.5 ENST00000671521.1 |
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| CDS CCA 72 bp | TGGTTCTTGAGGTTGAGAAATCCAAAATCAAGATACTaGCCAATTTGGTTCCTCGGTGAGGGCTCTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: WFLRLRNPKSRY*PIWFLGEGSLP Trigger: AGGAAGAGAGCCCTCACCGAGGAACCAAATTGGCCAGTATCTTGATTTTGGATTTCTCAACCTCAAGAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000546975.4 ENST00000549802.5 ENST00000551306.1 ENST00000551563.6 ENST00000551764.5 ENST00000551843.5 ENST00000552106.5 ENST00000552277.3 ENST00000553207.5 ENST00000671521.1 |
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| CDS CCA 72 bp | GGACAAAGATGCTTGCTCTCATGGACATTGACTGGGTaGCTTGAACAGCAGACATTCATTTCTCATGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: GQRCLLSWTLTG*LEQQTFISHGS Trigger: AGAACCATGAGAAATGAATGTCTGCTGTTCAAGCCACCCAGTCAATGTCCATGAGAGCAAGCATCTTTGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000551764.5 ENST00000551843.5 ENST00000552106.5 ENST00000671521.1 |
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| CDS CCA 72 bp | AGCTGGGGCTGCCATAACAAAATACCATTGACTGGGTaGCTTGAACAGCAGACATTCATTTCTCATGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: SWGCHNKIPLTG*LEQQTFISHGS Trigger: AGAACCATGAGAAATGAATGTCTGCTGTTCAAGCCACCCAGTCAATGGTATTTTGTTATGGCAGCCCCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551306.1 |
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| CDS CAA 72 bp | AAAGGGAAAAGCAGAGGTGATCAGGTCTATGTCCGCTaGCTGGAATTAGTCATGGCAGAATTCAGGAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: KGKSRGDQVYVR*LELVMAEFRKQ Trigger: TTGCTTCCTGAATTCTGCCATGACTAATTCCAGCAAGCGGACATAGACCTGATCACCTCTGCTTTTCCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664336.1 |
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| CDS TCA 72 bp | TCCTTCTGTGACAAATTGCATTGCTCTCTGCTTATCTaGGCTCTCAAAATGCAATTGGTAGACCTGCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: SFCDKLHCSLLI*ALKMQLVDLQR Trigger: CCTCTGCAGGTCTACCAATTGCATTTTGAGAGCTCAGATAAGCAGAGAGCAATGCAATTTGTCACAGAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000549802.5 ENST00000664336.1 |
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| CDS GCA 72 bp | CTTTTGAGCCAGATTGCTCTCCTGGCTAGGGAAATATaGGGTCACTTTATTTACCAGTGTTCAGATCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: LLSQIALLAREI*GHFIYQCSDQA Trigger: TGCTTGATCTGAACACTGGTAAATAAAGTGACCGCATATTTCCCTAGCCAGGAGAGCAATCTGGCTCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000546975.4 ENST00000549802.5 ENST00000551563.6 ENST00000551843.5 ENST00000552106.5 ENST00000664336.1 ENST00000671521.1 |
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| CDS GCA 72 bp | ATTAATGTGCATGCTCATCAACCTTCCCAGGTCAATTaGAATCTCAGGACATGTTTGTCACTCCCACCTGAT | + |
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Preference number: 6 (lower is better) Translates to: INVHAHQPSQVN*NLRTCLSLPPD Trigger: ATCAGGTGGGAGTGACAAACATGTCCTGAGATTGCAATTGACCTGGGAAGGTTGATGAGCATGCACATTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664336.1 |
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| CDS TCA 72 bp | TGCCAAATTTGCCAGCCTCCTTCTGACACCTTGTCATaGACCAATAACAAGCAGTTTGCAGATCAAACTCAT | + |
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Preference number: 6 (lower is better) Translates to: CQICQPPSDTLS*TNNKQFADQTH Trigger: ATGAGTTTGATCTGCAAACTGCTTGTTATTGGTTCATGACAAGGTGTCAGAAGGAGGCTGGCAAATTTGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000549802.5 ENST00000671521.1 |
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| CDS TCA 72 bp | GGTCTCAATTTCTTAAAGTGGAGCCCCAAAGAATTGTaGTACTACCAACAAGGCAGGTCACAGCTATGTTCA | + |
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Preference number: 6 (lower is better) Translates to: GLNFLKWSPKEL*YYQQGRSQLCS Trigger: TGAACATAGCTGTGACCTGCCTTGTTGGTAGTATCACAATTCTTTGGGGCTCCACTTTAAGAAATTGAGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000546975.4 ENST00000549802.5 ENST00000551563.6 ENST00000551843.5 ENST00000552106.5 ENST00000664336.1 ENST00000671521.1 |
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| CDS CAA 72 bp | GCAGTTTGCAGATCAAACTCATCCATGGACCACACTTaGCTAGACCACTTTCTAGATGAAGGTTTCCAAACT | + |
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Preference number: 6 (lower is better) Translates to: AVCRSNSSMDHT*LDHFLDEGFQT Trigger: AGTTTGGAAACCTTCATCTAGAAAGTGGTCTAGCAAAGTGTGGTCCATGGATGAGTTTGATCTGCAAACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000546975.4 ENST00000549802.5 ENST00000551563.6 ENST00000551764.5 ENST00000551843.5 ENST00000552106.5 ENST00000553207.5 ENST00000671521.1 |
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| CDS TCA 72 bp | TCCTTCTGTGACAAATTGCATTGCTCTCTGCTTATCTaGGCTCTCAAAATGCAATTGGTAGACCTTGTCATG | + |
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Preference number: 6 (lower is better) Translates to: SFCDKLHCSLLI*ALKMQLVDLVM Trigger: CATGACAAGGTCTACCAATTGCATTTTGAGAGCTCAGATAAGCAGAGAGCAATGCAATTTGTCACAGAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000546975.4 ENST00000551563.6 ENST00000551843.5 ENST00000552106.5 |
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| CDS TCA 72 bp | ATGAAGCAACACATTACAACTGTATTAGCTGATAAGTaGACTGTGGCTGGCCCACCCATCTGCATAGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: MKQHITTVLADK*TVAGPPICIEN Trigger: ATTTTCTATGCAGATGGGTGGGCCAGCCACAGTTCACTTATCAGCTAATACAGTTGTAATGTGTTGCTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664336.1 |
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| CDS CAA 72 bp | ACTAGCCATCGGGAATACGGCTTCCTTCCTTTTAACTaGAAGGCCAATTTCATAAACTGCAACACCTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: TSHREYGFLPFN*KANFINCNTFC Trigger: ACAAAAGGTGTTGCAGTTTATGAAATTGGCCTTCAAGTTAAAAGGAAGGAAGCCGTATTCCCGATGGCTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548552.2 |
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| CDS CAA 90 bp | CAAAATGCAATTGGTAGACCTTGTCATGAACCAATAACAAGCAGTTaGCAGATCAAACTCATCCATGGACCACACTTTGCTAGACCACTT | + |
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Preference number: 6 (lower is better) Translates to: QNAIGRPCHEPITSS*QIKLIHGPHFARPL Trigger: AAGTGGTCTAGCAAAGTGTGGTCCATGGATGAGTTTGATCTGCAAACTGCTTGTTATTGGTTCATGACAAGGTCTACCAATTGCATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000546975.4 ENST00000551563.6 ENST00000551843.5 ENST00000552106.5 |
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| CDS CAA 90 bp | ACTTTGCTAGACCACTTTCTAGATGAAGGTTTCCAAACTTTTTCATaGACTGGGTGGCTTGAACAGCAGACATTCATTTCTCATGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: TLLDHFLDEGFQTFS*TGWLEQQTFISHGS Trigger: AGAACCATGAGAAATGAATGTCTGCTGTTCAAGCCACCCAGTCAATGAAAAAGTTTGGAAACCTTCATCTAGAAAGTGGTCTAGCAAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000546975.4 ENST00000549802.5 ENST00000551563.6 ENST00000553207.5 |
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| CDS CAA 90 bp | TTACTGTTTGGAACCAATTCTTGTCATGAACCAATAACAAGCAGTTaGCAGATCAAACTCATCCATGGACCACACTTTGCTAGACCACTT | + |
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Preference number: 6 (lower is better) Translates to: LLFGTNSCHEPITSS*QIKLIHGPHFARPL Trigger: AAGTGGTCTAGCAAAGTGTGGTCCATGGATGAGTTTGATCTGCAAACTGCTTGTTATTGGTTCATGACAAGAATTGGTTCCAAACAGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000551764.5 ENST00000553207.5 |
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| CDS TCA 72 bp | TCTGGCGGCTTTACTGTTTGGAACCAATTCTTGTCATaGACCAATAACAAGCAGTTTGCAGATCAAACTCAT | + |
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Preference number: 6 (lower is better) Translates to: SGGFTVWNQFLS*TNNKQFADQTH Trigger: ATGAGTTTGATCTGCAAACTGCTTGTTATTGGTTCATGACAAGAATTGGTTCCAAACAGTAAAGCCGCCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000551764.5 ENST00000553207.5 |
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| CDS GCA 72 bp | CTGCATAGAAAATCCATTTGTGTGACGTTATTAATGTaGATGCTCATCAACCTTCCCAGGTCAATTGCAATC | + |
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Preference number: 6 (lower is better) Translates to: LHRKSICVTLLM*MLINLPRSIAI Trigger: GATTGCAATTGACCTGGGAAGGTTGATGAGCATGCACATTAATAACGTCACACAAATGGATTTTCTATGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664336.1 |
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| CDS CCA 72 bp | CTAGATGAAGGTTTCCAAACTTTTTCATTGACTGGGTaGCTTGAACAGCAGACATTCATTTCTCATGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LDEGFQTFSLTG*LEQQTFISHGS Trigger: AGAACCATGAGAAATGAATGTCTGCTGTTCAAGCCACCCAGTCAATGAAAAAGTTTGGAAACCTTCATCTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000546975.4 ENST00000549802.5 ENST00000551563.6 ENST00000553207.5 |
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| CDS CCA 72 bp | TACAAAGTTAACTATTTTCTGATGAGTAACGCAGGATaGAGTCTTTGCAATAAACAGCTGGACCACAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: YKVNYFLMSNAG*SLCNKQLDHKS Trigger: CGACTTGTGGTCCAGCTGTTTATTGCAAAGACTCCATCCTGCGTTACTCATCAGAAAATAGTTAACTTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000549802.5 ENST00000551843.5 ENST00000664336.1 |
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| CDS CAA 72 bp | GACCACTTTCTAGATGAAGGTTTCCAAACTTTTTCATaGACTGGGTGGCTTGAACAGCAGACATTCATTTCT | + |
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Preference number: 6 (lower is better) Translates to: DHFLDEGFQTFS*TGWLEQQTFIS Trigger: AGAAATGAATGTCTGCTGTTCAAGCCACCCAGTCAATGAAAAAGTTTGGAAACCTTCATCTAGAAAGTGGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000546975.4 ENST00000549802.5 ENST00000551563.6 ENST00000553207.5 |
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| CDS CAA 72 bp | AAAATGCCTTCTTGTAACAGTGTCGAGAAGACTTGCTaGTACCTAAGAGCTCCATCCTTAATTGTAACAATG | + |
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Preference number: 6 (lower is better) Translates to: KMPSCNSVEKTC*YLRAPSLIVTM Trigger: CATTGTTACAATTAAGGATGGAGCTCTTAGGTACAAGCAAGTCTTCTCGACACTGTTACAAGAAGGCATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552277.3 |
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