Pregenerated sensors for LINC01618 (Homo sapiens)
Ensembl gene IDs: ENSG00000250302Ensembl transcript IDs: ENST00000514957.1, ENST00000650700.1, ENST00000652441.1, ENST00000653034.1
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCGCGTCAGCCCGCGCAACTCCAGCTGACAAAGAGGCCTGCGACCTaGGACGGGCGCACAAACCAGAGAGGCGGCGCGGGGCGGGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: ARQPAQLQLTKRPAT*DGRTNQRGGAGRGG Trigger: CCCTCCCCGCCCCGCGCCGCCTCTCTGGTTTGTGCGCCCGTCGCAGGTCGCAGGCCTCTTTGTCAGCTGGAGTTGCGCGGGCTGACGCGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650700.1 |
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| CDS GCA 90 bp | CATAGTGGCGCGTCAGCCCGCGCAACTCCAGCTGACAAAGAGGCCTaGGACCTGCGACGGGCGCACAAACCAGAGAGGCGGCGCGGGGCG | + |
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Preference number: 5 (lower is better) Translates to: HSGASARATPADKEA*DLRRAHKPERRRGA Trigger: CGCCCCGCGCCGCCTCTCTGGTTTGTGCGCCCGTCGCAGGTCGCAGGCCTCTTTGTCAGCTGGAGTTGCGCGGGCTGACGCGCCACTATG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650700.1 |
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| CDS GCA 90 bp | GGGCTGGCAGAGCCCAGACCAGAGGCGTGGGAGCCGCGCTGCTGGTaGTGGGGGTGCTCCAGCCGGCAGAACAGTGGGAAGGGAAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: GLAEPRPEAWEPRCW*WGCSSRQNSGKGKA Trigger: TGCTTTTCCCTTCCCACTGTTCTGCCGGCTGGAGCACCCCCAGCACCAGCAGCGCGGCTCCCACGCCTCTGGTCTGGGCTCTGCCAGCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653034.1 |
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| CDS CCA 90 bp | CTGGCAGAGCCCAGACCAGAGGCGTGGGAGCCGCGCTGCTGGTGCTaGGGGTGCTCCAGCCGGCAGAACAGTGGGAAGGGAAAAGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: LAEPRPEAWEPRCWC*GCSSRQNSGKGKAV Trigger: CACTGCTTTTCCCTTCCCACTGTTCTGCCGGCTGGAGCACCCCCAGCACCAGCAGCGCGGCTCCCACGCCTCTGGTCTGGGCTCTGCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653034.1 |
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| CDS TCA 90 bp | GCCTGGCGGCGATCGTCGGCCAGTTTATCCCTCGGAGTTGCACTGTaGGTGCGTTTCTGCCCTTTGGTCTCCGGCGGGGAGGGCTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: AWRRSSASLSLGVAL*VRFCPLVSGGEGSQ Trigger: CTGGGAGCCCTCCCCGCCGGAGACCAAAGGGCAGAAACGCACTCACAGTGCAACTCCGAGGGATAAACTGGCCGACGATCGCCGCCAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000652441.1 ENST00000653034.1 |
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| CDS GCA 90 bp | GGCGGCGATCGTCGGCCAGTTTATCCCTCGGAGTTGCACTGTGAGTaGGTTTCTGCCCTTTGGTCTCCGGCGGGGAGGGCTCCCAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: GGDRRPVYPSELHCE*VSALWSPAGRAPRQ Trigger: CTGCCTGGGAGCCCTCCCCGCCGGAGACCAAAGGGCAGAAACGCACTCACAGTGCAACTCCGAGGGATAAACTGGCCGACGATCGCCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000652441.1 ENST00000653034.1 |
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| CDS GCA 90 bp | TCTTCTGGCCTGGCGGCGATCGTCGGCCAGTTTATCCCTCGGAGTTaGACTGTGAGTGCGTTTCTGCCCTTTGGTCTCCGGCGGGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: SSGLAAIVGQFIPRS*TVSAFLPFGLRRGG Trigger: CCCTCCCCGCCGGAGACCAAAGGGCAGAAACGCACTCACAGTGCAACTCCGAGGGATAAACTGGCCGACGATCGCCGCCAGGCCAGAAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000652441.1 ENST00000653034.1 |
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| CDS CCA 90 bp | GCGAGAGTCTTCAGGAGTTTCAGTTCCCGCCGCGAGCCTTCTTCTTaGTCTTCTGGCCTGGCGGCGATCGTCGGCCAGTTTATCCCTCGG | + |
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Preference number: 5 (lower is better) Translates to: ARVFRSFSSRREPSS*SSGLAAIVGQFIPR Trigger: CCGAGGGATAAACTGGCCGACGATCGCCGCCAGGCCAGAAGACCAAGAAGAAGGCTCGCGGCGGGAACTGAAACTCCTGAAGACTCTCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652441.1 |
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| CDS CCA 90 bp | CTTCAGGAGTTTCAGTTCCCGCCGCGAGCCTTCTTCTTGGTCTTCTaGCCTGGCGGCGATCGTCGGCCAGTTTATCCCTCGGAGTTGCAC | + |
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Preference number: 5 (lower is better) Translates to: LQEFQFPPRAFFLVF*PGGDRRPVYPSELH Trigger: GTGCAACTCCGAGGGATAAACTGGCCGACGATCGCCGCCAGGCCAGAAGACCAAGAAGAAGGCTCGCGGCGGGAACTGAAACTCCTGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652441.1 |
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| CDS TCA 90 bp | ACTAGGAGAACCTCAGGCCCTCTTCCTGGGAAGACCAAACCCCCTTaGGTGCTCCTCCTGCTTCAGACGGAGGTGACAGTCCTCACTTTG | + |
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Preference number: 5 (lower is better) Translates to: TRRTSGPLPGKTKPP*VLLLLQTEVTVLTL Trigger: CAAAGTGAGGACTGTCACCTCCGTCTGAAGCAGGAGGAGCACTCAAGGGGGTTTGGTCTTCCCAGGAAGAGGGCCTGAGGTTCTCCTAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000650700.1 ENST00000652441.1 |
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| CDS GCA 90 bp | CGGACCACCAGTGCTCAGATGGAAATGCAGAAATCACCCGTCTTCTaGGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTC | + |
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Preference number: 5 (lower is better) Translates to: RTTSAQMEMQKSPVF*VAHAGSCRPELFLF Trigger: GAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGCACTGGTGGTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650700.1 |
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| CDS CCA 90 bp | CCGGCCGCCCCTTGTCTCTTTAGGTCTCTTCTGCTTTATCAAACATaGACACAAAAAGGGTGCTCCTCAGGCGTACAGGCGCCGCCAACC | + |
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Preference number: 5 (lower is better) Translates to: PAAPCLFRSLLLYQT*TQKGCSSGVQAPPT Trigger: GGTTGGCGGCGCCTGTACGCCTGAGGAGCACCCTTTTTGTGTCCATGTTTGATAAAGCAGAAGAGACCTAAAGAGACAAGGGGCGGCCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653034.1 |
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| CDS TCA 90 bp | CTAGCATGCTGGCTAGCTGCAGTCCAAGCTGAGGGTCAACCTGTTTaGTGTGCAACAGGTCAGCTTTGTTGGCCACGACCACCACAGGCA | + |
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Preference number: 5 (lower is better) Translates to: LACWLAAVQAEGQPV*CATGQLCWPRPPQA Trigger: TGCCTGTGGTGGTCGTGGCCAACAAAGCTGACCTGTTGCACATCAAACAGGTTGACCCTCAGCTTGGACTGCAGCTAGCCAGCATGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650700.1 ENST00000652441.1 |
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| CDS GCA 90 bp | TCACACTCCCTTGACACCGGCCTCTGTTACCACCTTCGTTCTCCCTaGTTAACCCCACACTTGTTGCTTCCGTGGAGAAGCGTCATGTCA | + |
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Preference number: 5 (lower is better) Translates to: SHSLDTGLCYHLRSP*LTPHLLLPWRSVMS Trigger: TGACATGACGCTTCTCCACGGAAGCAACAAGTGTGGGGTTAAGCAGGGAGAACGAAGGTGGTAACAGAGGCCGGTGTCAAGGGAGTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514957.1 |
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| CDS TCA 90 bp | AGGGAAAAGCAGTGGGCCCATTTAGAGGTTGAAAGAGGCAGGGACTaGGAAGCTCCAGGGTTTGAGGACCACTCCCCCATCCATACAACA | + |
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Preference number: 5 (lower is better) Translates to: REKQWAHLEVERGRD*EAPGFEDHSPIHTT Trigger: TGTTGTATGGATGGGGGAGTGGTCCTCAAACCCTGGAGCTTCTCAGTCCCTGCCTCTTTCAACCTCTAAATGGGCCCACTGCTTTTCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653034.1 |
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| CDS GCA 90 bp | CTCTTTAGGTCTCTTCTGCTTTATCAAACATGGACACAAAAAGGGTaGTCCTCAGGCGTACAGGCGCCGCCAACCAGCCACTGCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: LFRSLLLYQTWTQKG*SSGVQAPPTSHCFW Trigger: CCAGAAGCAGTGGCTGGTTGGCGGCGCCTGTACGCCTGAGGAGCACCCTTTTTGTGTCCATGTTTGATAAAGCAGAAGAGACCTAAAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653034.1 |
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| CDS TCA 90 bp | TTAGAAGATTGCCTGGCACAGAGTACACACCTGATGAAGGCGTGCTaGATACTTCAGTTCCCGCCGCGAGCCTTCTTCTTGGTCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: LEDCLAQSTHLMKAC*ILQFPPRAFFLVFW Trigger: CCAGAAGACCAAGAAGAAGGCTCGCGGCGGGAACTGAAGTATTCAGCACGCCTTCATCAGGTGTGTACTCTGTGCCAGGCAATCTTCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653034.1 |
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| CDS GCA 90 bp | TCACCACAGCATCTGCCCAGCGAATGCACCTATTCAGCTGTTCACTaGAGCTCAGGCTGTTCTCATGGACCTGAATACCTGGAGTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: SPQHLPSECTYSAVH*SSGCSHGPEYLECL Trigger: AAGACACTCCAGGTATTCAGGTCCATGAGAACAGCCTGAGCTGCAGTGAACAGCTGAATAGGTGCATTCGCTGGGCAGATGCTGTGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650700.1 ENST00000652441.1 |
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| CDS GCA 90 bp | TTCATAGTCACCGATGAATCGTTTGGTGAGGAACCGGACCACCAGTaGTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCA | + |
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Preference number: 5 (lower is better) Translates to: FIVTDESFGEEPDHQ*SDGNAEITRLLRRS Trigger: TGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGCACTGGTGGTCCGGTTCCTCACCAAACGATTCATCGGTGACTATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650700.1 |
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| CDS TCA 90 bp | TTTCGAGATAGTGGTCACGAGCCTTCGGTCGACGGCTCACCTTGCTaGGATAAACAACCAGGATGTAGTTTCCAGGAATCTGGAAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: FRDSGHEPSVDGSPC*DKQPGCSFQESGRV Trigger: AACCCTTCCAGATTCCTGGAAACTACATCCTGGTTGTTTATCTCAGCAAGGTGAGCCGTCGACCGAAGGCTCGTGACCACTATCTCGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000514957.1 ENST00000650700.1 |
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| CDS GCA 90 bp | ATAGCTCTTGTAGTCAGTGATGGAGAAAACGATCACCACAGCATCTaGCCAGCGAATGCACCTATTCAGCTGTTCACTGCAGCTCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: IALVVSDGENDHHSI*PANAPIQLFTAAQA Trigger: AGCCTGAGCTGCAGTGAACAGCTGAATAGGTGCATTCGCTGGGCAGATGCTGTGGTGATCGTTTTCTCCATCACTGACTACAAGAGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000650700.1 ENST00000652441.1 |
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| CDS CCA 90 bp | CTGATTAAGAGCATGAATGGATGTGCAGATCACCCTTCACCCATATaGCTAAAAGCGAGAGTCTTCAGGAGTTTCAGTTCCCGCCGCGAG | + |
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Preference number: 5 (lower is better) Translates to: LIKSMNGCADHPSPI*LKARVFRSFSSRRE Trigger: CTCGCGGCGGGAACTGAAACTCCTGAAGACTCTCGCTTTTAGCCATATGGGTGAAGGGTGATCTGCACATCCATTCATGCTCTTAATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652441.1 |
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| CDS CCA 90 bp | TTTAAGGAAATGGTTCACATGATTATGGAGGCGGGGCCCACAAGCTaGAAAGCCAGGAAGAGCCGGTATTGCAGTTCAAGTCTGATAGCT | + |
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Preference number: 5 (lower is better) Translates to: FKEMVHMIMEAGPTS*KARKSRYCSSSLIA Trigger: AGCTATCAGACTTGAACTGCAATACCGGCTCTTCCTGGCTTTCCAGCTTGTGGGCCCCGCCTCCATAATCATGTGAACCATTTCCTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514957.1 |
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| CDS GCA 90 bp | AAAGCCAGGAAGAGCCGGTATTGCAGTTCAAGTCTGATAGCTGCCTaGCACAGAATTCCCTCTACTGCAAAGATTGATAAGCAGCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: KARKSRYCSSSLIAA*HRIPSTAKIDKQQV Trigger: GACTTGCTGCTTATCAATCTTTGCAGTAGAGGGAATTCTGTGGCAGGCAGCTATCAGACTTGAACTGCAATACCGGCTCTTCCTGGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514957.1 |
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| CDS CCA 90 bp | TACCACCTTCGTTCTCCCTGCTTAACCCCACACTTGTTGCTTCCGTaGAGAAGCGTCATGTCACATTTGTGTTCTGTTGGAAAACATGAG | + |
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Preference number: 5 (lower is better) Translates to: YHLRSPCLTPHLLLP*RSVMSHLCSVGKHE Trigger: CTCATGTTTTCCAACAGAACACAAATGTGACATGACGCTTCTCCACGGAAGCAACAAGTGTGGGGTTAAGCAGGGAGAACGAAGGTGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514957.1 |
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| CDS TCA 90 bp | TACAGAGGACGTGGAAGGCGCTGTAGACATCATTATAATTTTCACTaGCAGACACTTCATAGAATGAGCAGCCTAGCATGCTGGCTAGCT | + |
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Preference number: 5 (lower is better) Translates to: YRGRGRRCRHHYNFH*QTLHRMSSLACWLA Trigger: AGCTAGCCAGCATGCTAGGCTGCTCATTCTATGAAGTGTCTGTCAGTGAAAATTATAATGATGTCTACAGCGCCTTCCACGTCCTCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000650700.1 ENST00000652441.1 |
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| CDS TCA 90 bp | TCCTATTCGGCCATCTTGGCTCCACTCTCTATGGTATTTTGCAGATaGGGAGATGGTCTCAGAAGATTCATAGACATGCTTAAGCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: SYSAILAPLSMVFCR*GDGLRRFIDMLKPR Trigger: TCTTGGCTTAAGCATGTCTATGAATCTTCTGAGACCATCTCCTCATCTGCAAAATACCATAGAGAGTGGAGCCAAGATGGCCGAATAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650700.1 |
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| CDS TCA 90 bp | TGCTTCAAAAGTATTAAATCCAGTGCCTATGACTCCATGTGCTTGTaGCTTGACTGGCTTTGCTGTCCTCTGTGTCAGCATCATCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: CFKSIKSSAYDSMCL*LDWLCCPLCQHHLQ Trigger: TTGAAGATGATGCTGACACAGAGGACAGCAAAGCCAGTCAAGTCACAAGCACATGGAGTCATAGGCACTGGATTTAATACTTTTGAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000650700.1 ENST00000652441.1 |
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| CDS GCA 90 bp | GGGTTGGTGACCAGTGTTATGAATGTAAAAGTGTCTAAAGACATATaGAGAAAGGATTCTTCTAAGAGTATTGCTTTCTTTTGCGTAGTT | + |
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Preference number: 5 (lower is better) Translates to: GLVTSVMNVKVSKDI*RKDSSKSIAFFCVV Trigger: AACTACGCAAAAGAAAGCAATACTCTTAGAAGAATCCTTTCTGCATATGTCTTTAGACACTTTTACATTCATAACACTGGTCACCAACCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653034.1 |
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| CDS GCA 72 bp | GAGCCCAGACCAGAGGCGTGGGAGCCGCGCTGCTGGTaGTGGGGGTGCTCCAGCCGGCAGAACAGTGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: EPRPEAWEPRCW*WGCSSRQNSGK Trigger: CTTCCCACTGTTCTGCCGGCTGGAGCACCCCCAGCACCAGCAGCGCGGCTCCCACGCCTCTGGTCTGGGCTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653034.1 |
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| CDS GCA 72 bp | CCCGCGCAACTCCAGCTGACAAAGAGGCCTGCGACCTaGGACGGGCGCACAAACCAGAGAGGCGGCGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: PAQLQLTKRPAT*DGRTNQRGGAG Trigger: CCCCGCGCCGCCTCTCTGGTTTGTGCGCCCGTCGCAGGTCGCAGGCCTCTTTGTCAGCTGGAGTTGCGCGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650700.1 |
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| CDS GCA 72 bp | GCGTCAGCCCGCGCAACTCCAGCTGACAAAGAGGCCTaGGACCTGCGACGGGCGCACAAACCAGAGAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: ASARATPADKEA*DLRRAHKPERR Trigger: CCGCCTCTCTGGTTTGTGCGCCCGTCGCAGGTCGCAGGCCTCTTTGTCAGCTGGAGTTGCGCGGGCTGACGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650700.1 |
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| CDS CCA 72 bp | CCCTCGGAGTTGCACTGTGAGTGCGTTTCTGCCCTTTaGTCTCCGGCGGGGAGGGCTCCCAGGCAGGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: PSELHCECVSAL*SPAGRAPRQGL Trigger: CAGACCCTGCCTGGGAGCCCTCCCCGCCGGAGACCAAAGGGCAGAAACGCACTCACAGTGCAACTCCGAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000652441.1 ENST00000653034.1 |
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| CDS CAA 72 bp | GAGAATCCCGGGGCAGGTCCCGGCGCGGTAACAAGTTaGCGCTTTGCCTCCCTAGGGCAGACACGCCGCTAC | + |
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Preference number: 6 (lower is better) Translates to: ENPGAGPGAVTS*RFASLGQTRRY Trigger: GTAGCGGCGTGTCTGCCCTAGGGAGGCAAAGCGCAAACTTGTTACCGCGCCGGGACCTGCCCCGGGATTCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653034.1 |
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| CDS GCA 72 bp | CGGGGCAGGTCCCGGCGCGGTAACAAGTTTGCGCTTTaGCTCCCTAGGGCAGACACGCCGCTACTTTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: RGRSRRGNKFAL*LPRADTPLLCS Trigger: GCTACAAAGTAGCGGCGTGTCTGCCCTAGGGAGGCAAAGCGCAAACTTGTTACCGCGCCGGGACCTGCCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653034.1 |
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| CDS CAA 90 bp | GTCTTCTGGCCTGGCGGCGATCGTCGGCCAGTTTATCCCTCGGAGTaGCACTGTGAGTGCGTTTCTGCCCTTTGGTCTCCGGCGGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: VFWPGGDRRPVYPSE*HCECVSALWSPAGR Trigger: CCTCCCCGCCGGAGACCAAAGGGCAGAAACGCACTCACAGTGCAACTCCGAGGGATAAACTGGCCGACGATCGCCGCCAGGCCAGAAGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000652441.1 ENST00000653034.1 |
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| CDS GCA 72 bp | CGTCGGCCAGTTTATCCCTCGGAGTTGCACTGTGAGTaGGTTTCTGCCCTTTGGTCTCCGGCGGGGAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: RRPVYPSELHCE*VSALWSPAGRA Trigger: AGCCCTCCCCGCCGGAGACCAAAGGGCAGAAACGCACTCACAGTGCAACTCCGAGGGATAAACTGGCCGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000652441.1 ENST00000653034.1 |
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| CDS CCA 72 bp | GTTCCCGCCGCGAGCCTTCTTCTTGGTCTTCTGGCCTaGCGGCGATCGTCGGCCAGTTTATCCCTCGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: VPAASLLLGLLA*RRSSASLSLGV Trigger: AACTCCGAGGGATAAACTGGCCGACGATCGCCGCCAGGCCAGAAGACCAAGAAGAAGGCTCGCGGCGGGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000652441.1 ENST00000653034.1 |
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| CDS CCA 72 bp | CTTCAGTTCCCGCCGCGAGCCTTCTTCTTGGTCTTCTaGCCTGGCGGCGATCGTCGGCCAGTTTATCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: LQFPPRAFFLVF*PGGDRRPVYPS Trigger: CGAGGGATAAACTGGCCGACGATCGCCGCCAGGCCAGAAGACCAAGAAGAAGGCTCGCGGCGGGAACTGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653034.1 |
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| CDS TCA 72 bp | CGATCGTCGGCCAGTTTATCCCTCGGAGTTGCACTGTaGGTGCGTTTCTGCCCTTTGGTCTCCGGCGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: RSSASLSLGVAL*VRFCPLVSGGE Trigger: CTCCCCGCCGGAGACCAAAGGGCAGAAACGCACTCACAGTGCAACTCCGAGGGATAAACTGGCCGACGATCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000652441.1 ENST00000653034.1 |
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| CDS GCA 72 bp | CTGGCGGCGATCGTCGGCCAGTTTATCCCTCGGAGTTaGACTGTGAGTGCGTTTCTGCCCTTTGGTCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: LAAIVGQFIPRS*TVSAFLPFGLR Trigger: CCGGAGACCAAAGGGCAGAAACGCACTCACAGTGCAACTCCGAGGGATAAACTGGCCGACGATCGCCGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000652441.1 ENST00000653034.1 |
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| CDS CCA 72 bp | TTTCAGTTCCCGCCGCGAGCCTTCTTCTTGGTCTTCTaGCCTGGCGGCGATCGTCGGCCAGTTTATCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: FQFPPRAFFLVF*PGGDRRPVYPS Trigger: CGAGGGATAAACTGGCCGACGATCGCCGCCAGGCCAGAAGACCAAGAAGAAGGCTCGCGGCGGGAACTGAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652441.1 |
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| CDS CAA 72 bp | CTTCAGGAGTTTCAGTTCCCGCCGCGAGCCTTCTTCTaGGTCTTCTGGCCTGGCGGCGATCGTCGGCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: LQEFQFPPRAFF*VFWPGGDRRPV Trigger: AACTGGCCGACGATCGCCGCCAGGCCAGAAGACCAAGAAGAAGGCTCGCGGCGGGAACTGAAACTCCTGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652441.1 |
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| CDS CAA 90 bp | AGCGAGAGTCTTCAGGAGTTTCAGTTCCCGCCGCGAGCCTTCTTCTaGGTCTTCTGGCCTGGCGGCGATCGTCGGCCAGTTTATCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: SESLQEFQFPPRAFF*VFWPGGDRRPVYPS Trigger: CGAGGGATAAACTGGCCGACGATCGCCGCCAGGCCAGAAGACCAAGAAGAAGGCTCGCGGCGGGAACTGAAACTCCTGAAGACTCTCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652441.1 |
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| CDS GCA 72 bp | GCCGACCTTGGGCTCCAGGAATTCGTTGTCTACGTCTaGGGAGGTGCGGCAGCCTCAGTTTTAAGCGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: ADLGLQEFVVYV*GGAAASVLSAG Trigger: ACCTGCGCTTAAAACTGAGGCTGCCGCACCTCCGCAGACGTAGACAACGAATTCCTGGAGCCCAAGGTCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653034.1 |
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| CDS CCA 72 bp | TTCAGGAGTTTCAGTTCCCGCCGCGAGCCTTCTTCTTaGTCTTCTGGCCTGGCGGCGATCGTCGGCCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: FRSFSSRREPSS*SSGLAAIVGQF Trigger: AAACTGGCCGACGATCGCCGCCAGGCCAGAAGACCAAGAAGAAGGCTCGCGGCGGGAACTGAAACTCCTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652441.1 |
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| CDS CCA 72 bp | GCTGAATACTTCAGTTCCCGCCGCGAGCCTTCTTCTTaGTCTTCTGGCCTGGCGGCGATCGTCGGCCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: AEYFSSRREPSS*SSGLAAIVGQF Trigger: AAACTGGCCGACGATCGCCGCCAGGCCAGAAGACCAAGAAGAAGGCTCGCGGCGGGAACTGAAGTATTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653034.1 |
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| CDS TCA 72 bp | CAGTGGGCCCATTTAGAGGTTGAAAGAGGCAGGGACTaGGAAGCTCCAGGGTTTGAGGACCACTCCCCCATC | + |
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Preference number: 6 (lower is better) Translates to: QWAHLEVERGRD*EAPGFEDHSPI Trigger: GATGGGGGAGTGGTCCTCAAACCCTGGAGCTTCTCAGTCCCTGCCTCTTTCAACCTCTAAATGGGCCCACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653034.1 |
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| CDS GCA 72 bp | AGTGCTCAGATGGAAATGCAGAAATCACCCGTCTTCTaGGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SAQMEMQKSPVF*VAHAGSCRPEL Trigger: CAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650700.1 |
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| CDS CAA 90 bp | TATGGAGGCGGGGCCCACAAGCTGGAAAGCCAGGAAGAGCCGGTATaGCAGTTCAAGTCTGATAGCTGCCTGCCACAGAATTCCCTCTAC | + |
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Preference number: 6 (lower is better) Translates to: YGGGAHKLESQEEPV*QFKSDSCLPQNSLY Trigger: GTAGAGGGAATTCTGTGGCAGGCAGCTATCAGACTTGAACTGCAATACCGGCTCTTCCTGGCTTTCCAGCTTGTGGGCCCCGCCTCCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514957.1 |
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| CDS GCA 72 bp | TCTCTTCTGCTTTATCAAACATGGACACAAAAAGGGTaGTCCTCAGGCGTACAGGCGCCGCCAACCAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SLLLYQTWTQKG*SSGVQAPPTSH Trigger: GTGGCTGGTTGGCGGCGCCTGTACGCCTGAGGAGCACCCTTTTTGTGTCCATGTTTGATAAAGCAGAAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653034.1 |
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| CDS CCA 72 bp | ATGGTTCACATGATTATGGAGGCGGGGCCCACAAGCTaGAAAGCCAGGAAGAGCCGGTATTGCAGTTCAAGT | + |
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Preference number: 6 (lower is better) Translates to: MVHMIMEAGPTS*KARKSRYCSSS Trigger: ACTTGAACTGCAATACCGGCTCTTCCTGGCTTTCCAGCTTGTGGGCCCCGCCTCCATAATCATGTGAACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514957.1 |
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| CDS CAA 90 bp | GGCCTCTGTTACCACCTTCGTTCTCCCTGCTTAACCCCACACTTGTaGCTTCCGTGGAGAAGCGTCATGTCACATTTGTGTTCTGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: GLCYHLRSPCLTPHL*LPWRSVMSHLCSVG Trigger: TCCAACAGAACACAAATGTGACATGACGCTTCTCCACGGAAGCAACAAGTGTGGGGTTAAGCAGGGAGAACGAAGGTGGTAACAGAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514957.1 |
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| CDS CAA 90 bp | ACCGGCCTCTGTTACCACCTTCGTTCTCCCTGCTTAACCCCACACTaGTTGCTTCCGTGGAGAAGCGTCATGTCACATTTGTGTTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: TGLCYHLRSPCLTPH*LLPWRSVMSHLCSV Trigger: AACAGAACACAAATGTGACATGACGCTTCTCCACGGAAGCAACAAGTGTGGGGTTAAGCAGGGAGAACGAAGGTGGTAACAGAGGCCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514957.1 |
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| CDS TCA 72 bp | AGTGGTCACGAGCCTTCGGTCGACGGCTCACCTTGCTaGGATAAACAACCAGGATGTAGTTTCCAGGAATCT | + |
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Preference number: 6 (lower is better) Translates to: SGHEPSVDGSPC*DKQPGCSFQES Trigger: AGATTCCTGGAAACTACATCCTGGTTGTTTATCTCAGCAAGGTGAGCCGTCGACCGAAGGCTCGTGACCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000514957.1 ENST00000650700.1 |
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| CDS TCA 72 bp | CTGTCCTCTGTGTCAGCATCATCTTCAAGCATGTGCTaGTGGTTACAGCAGTGTCGGGCCTTGGATCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: LSSVSASSSSMC*WLQQCRALDLL Trigger: CAACAGATCCAAGGCCCGACACTGCTGTAACCATCAGCACATGCTTGAAGATGATGCTGACACAGAGGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650700.1 ENST00000652441.1 |
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| CDS GCA 72 bp | ACCGATGAATCGTTTGGTGAGGAACCGGACCACCAGTaGTCAGATGGAAATGCAGAAATCACCCGTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: TDESFGEEPDHQ*SDGNAEITRLL Trigger: CAGAAGACGGGTGATTTCTGCATTTCCATCTGAGCACTGGTGGTCCGGTTCCTCACCAAACGATTCATCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650700.1 |
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| CDS CAA 72 bp | AGGTTGAAAGAGGCAGGGACTGAGAAGCTCCAGGGTTaGAGGACCACTCCCCCATCCATACAACAGTTAGTA | + |
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Preference number: 6 (lower is better) Translates to: RLKEAGTEKLQG*RTTPPSIQQLV Trigger: TACTAACTGTTGTATGGATGGGGGAGTGGTCCTCAAACCCTGGAGCTTCTCAGTCCCTGCCTCTTTCAACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653034.1 |
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| CDS CAA 72 bp | TACCACCTTCGTTCTCCCTGCTTAACCCCACACTTGTaGCTTCCGTGGAGAAGCGTCATGTCACATTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: YHLRSPCLTPHL*LPWRSVMSHLC Trigger: ACACAAATGTGACATGACGCTTCTCCACGGAAGCAACAAGTGTGGGGTTAAGCAGGGAGAACGAAGGTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514957.1 |
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| CDS CAA 72 bp | TGTTACCACCTTCGTTCTCCCTGCTTAACCCCACACTaGTTGCTTCCGTGGAGAAGCGTCATGTCACATTTG | + |
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Preference number: 6 (lower is better) Translates to: CYHLRSPCLTPH*LLPWRSVMSHL Trigger: CAAATGTGACATGACGCTTCTCCACGGAAGCAACAAGTGTGGGGTTAAGCAGGGAGAACGAAGGTGGTAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514957.1 |
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| CDS TCA 72 bp | CCAGCCTGGCGGCAGAGTGAGACTCAGTCTGGAAATTaGTCGATTTACCTCACTGAAAGTCCTGAAGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: PAWRQSETQSGN*SIYLTESPEVE Trigger: TTCTACTTCAGGACTTTCAGTGAGGTAAATCGATCAATTTCCAGACTGAGTCTCACTCTGCCGCCAGGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650700.1 |
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| CDS CAA 72 bp | GGAGGCCTTTGTTTCGTCCATTTAAGGATTAGAAGATaGCCTGGCACAGAGTACACACCTGATGAAGGCGTG | + |
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Preference number: 6 (lower is better) Translates to: GGLCFVHLRIRR*PGTEYTPDEGV Trigger: CACGCCTTCATCAGGTGTGTACTCTGTGCCAGGCAATCTTCTAATCCTTAAATGGACGAAACAAAGGCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653034.1 |
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| CDS CCA 72 bp | AGCATGAATGGATGTGCAGATCACCCTTCACCCATATaGCTAAAAGCGAGAGTCTTCAGGAGTTTCAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: SMNGCADHPSPI*LKARVFRSFSS Trigger: GGAACTGAAACTCCTGAAGACTCTCGCTTTTAGCCATATGGGTGAAGGGTGATCTGCACATCCATTCATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652441.1 |
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| CDS CAA 72 bp | TTAAATCCAGTGCCTATGACTCCATGTGCTTGTGACTaGACTGGCTTTGCTGTCCTCTGTGTCAGCATCATC | + |
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Preference number: 6 (lower is better) Translates to: LNPVPMTPCACD*TGFAVLCVSII Trigger: GATGATGCTGACACAGAGGACAGCAAAGCCAGTCAAGTCACAAGCACATGGAGTCATAGGCACTGGATTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650700.1 ENST00000652441.1 |
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| CDS TCA 72 bp | GCCATCTTGGCTCCACTCTCTATGGTATTTTGCAGATaGGGAGATGGTCTCAGAAGATTCATAGACATGCTT | + |
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Preference number: 6 (lower is better) Translates to: AILAPLSMVFCR*GDGLRRFIDML Trigger: AAGCATGTCTATGAATCTTCTGAGACCATCTCCTCATCTGCAAAATACCATAGAGAGTGGAGCCAAGATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650700.1 |
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| CDS CAA 72 bp | ATTCCCTCTACTGCAAAGATTGATAAGCAGCAAGTCTaGTCCCCAATTTTGCAGATGAGGAGATGGTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: IPSTAKIDKQQV*SPILQMRRWSQ Trigger: CTGAGACCATCTCCTCATCTGCAAAATTGGGGACAAGACTTGCTGCTTATCAATCTTTGCAGTAGAGGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514957.1 |
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| CDS CAA 72 bp | CTATTCGGCCATCTTGGCTCCACTCTCTATGGTATTTaGCAGATGAGGAGATGGTCTCAGAAGATTCATAGA | + |
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Preference number: 6 (lower is better) Translates to: LFGHLGSTLYGI*QMRRWSQKIHR Trigger: TCTATGAATCTTCTGAGACCATCTCCTCATCTGCAAAATACCATAGAGAGTGGAGCCAAGATGGCCGAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650700.1 |
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| CDS CAA 90 bp | TGCCACAGAATTCCCTCTACTGCAAAGATTGATAAGCAGCAAGTCTaGTCCCCAATTTTGCAGATGAGGAGATGGTCTCAGAAGATTCAT | + |
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Preference number: 6 (lower is better) Translates to: CHRIPSTAKIDKQQV*SPILQMRRWSQKIH Trigger: ATGAATCTTCTGAGACCATCTCCTCATCTGCAAAATTGGGGACAAGACTTGCTGCTTATCAATCTTTGCAGTAGAGGGAATTCTGTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514957.1 |
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| CDS CAA 90 bp | TCAAAAGTATTAAATCCAGTGCCTATGACTCCATGTGCTTGTGACTaGACTGGCTTTGCTGTCCTCTGTGTCAGCATCATCTTCAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: SKVLNPVPMTPCACD*TGFAVLCVSIIFKH Trigger: ATGCTTGAAGATGATGCTGACACAGAGGACAGCAAAGCCAGTCAAGTCACAAGCACATGGAGTCATAGGCACTGGATTTAATACTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000650700.1 ENST00000652441.1 |
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| CDS CAA 90 bp | AAGGGAGAAGGAGAAAAAGTCAAGTTACTTAAACATAGAAATGGGTaGGTGACCAGTGTTATGAATGTAAAAGTGTCTAAAGACATATGC | + |
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Preference number: 6 (lower is better) Translates to: KGEGEKVKLLKHRNG*VTSVMNVKVSKDIC Trigger: GCATATGTCTTTAGACACTTTTACATTCATAACACTGGTCACCAACCCATTTCTATGTTTAAGTAACTTGACTTTTTCTCCTTCTCCCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653034.1 |
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