Pregenerated sensors for LINC01615 (Homo sapiens)
Ensembl gene IDs: ENSG00000223485Ensembl transcript IDs: ENST00000439703.1, ENST00000449466.1, ENST00000634877.1, ENST00000651190.1, ENST00000657431.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGCAGGCGTTGCCAGGAGCGGACTCAGACAGTGGAGGCCCCTCGCTaGCCCTCTCCGGGGCCACCTCCATCATGTGCTGAAGGTCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: SRRCQERTQTVEAPR*PSPGPPPSCAEGPS Trigger: AGAAGGACCTTCAGCACATGATGGAGGTGGCCCCGGAGAGGGTCAGCGAGGGGCCTCCACTGTCTGAGTCCGCTCCTGGCAACGCCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000634877.1 ENST00000651190.1 |
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| CDS GCA 90 bp | AGAACTTCTGAGCAACGTGGCAGCTGCCGGGACCGGGCCTCTGAGTaGAGAGAGCAGGCGTTGCCAGGAGCGGACTCAGACAGTGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: RTSEQRGSCRDRASE*REQALPGADSDSGG Trigger: GCCTCCACTGTCTGAGTCCGCTCCTGGCAACGCCTGCTCTCTGCACTCAGAGGCCCGGTCCCGGCAGCTGCCACGTTGCTCAGAAGTTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000439703.1 ENST00000449466.1 ENST00000634877.1 ENST00000651190.1 ENST00000657431.1 |
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| CDS TCA 90 bp | GGGAGGGTCACTGCCATGCAGGAGAGGGGAGCAGTGTGGGTTGTGTaGGATTTCCTAGAGGTGCCTCTCGCCATGGCCCTGCCAGCACCT | + |
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Preference number: 5 (lower is better) Translates to: GRVTAMQERGAVWVV*DFLEVPLAMALPAP Trigger: AGGTGCTGGCAGGGCCATGGCGAGAGGCACCTCTAGGAAATCTCACACAACCCACACTGCTCCCCTCTCCTGCATGGCAGTGACCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS GCA 90 bp | GAGGCAGCATCCCCTGCATGCCTGGGTGGTCCCCATCTCCAGGCCTaGGACAAGCACTTCTCATCTTCCCATCCTCTGACGGAGCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: EAASPACLGGPHLQA*DKHFSSSHPLTEPV Trigger: GACTGGCTCCGTCAGAGGATGGGAAGATGAGAAGTGCTTGTCGCAGGCCTGGAGATGGGGACCACCCAGGCATGCAGGGGATGCTGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000439703.1 ENST00000657431.1 |
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| CDS TCA 90 bp | AATATTCATAGGAAGCCAATGAGGCCTCTGTGGCTCCCACTGGCCTaGCAAGGAAGAAGAGGCCCCGGAGGGCACGGAGCCCGCCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: NIHRKPMRPLWLPLA*QGRRGPGGHGARLE Trigger: CTCCAGGCGGGCTCCGTGCCCTCCGGGGCCTCTTCTTCCTTGTCAGGCCAGTGGGAGCCACAGAGGCCTCATTGGCTTCCTATGAATATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS GCA 90 bp | CACGCAGGCTTGTTGTTGGATGGAGGAGAGGCAGCATCCCCTGCATaGCTGGGTGGTCCCCATCTCCAGGCCTGCGACAAGCACTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: HAGLLLDGGEAASPA*LGGPHLQACDKHFS Trigger: TGAGAAGTGCTTGTCGCAGGCCTGGAGATGGGGACCACCCAGGCATGCAGGGGATGCTGCCTCTCCTCCATCCAACAACAAGCCTGCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000439703.1 ENST00000634877.1 ENST00000657431.1 |
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| CDS CCA 90 bp | GAAGCACTCCAAGCCCTCTGGCAATGGAGTTCCGAGAAGAAAGAATaGGGCGCAGTTTCCAGGTTCTGCCTGCCCCTCCTACCCCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: EALQALWQWSSEKKE*GAVSRFCLPLLPQH Trigger: GTGCTGGGGTAGGAGGGGCAGGCAGAACCTGGAAACTGCGCCCCATTCTTTCTTCTCGGAACTCCATTGCCAGAGGGCTTGGAGTGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS CCA 90 bp | GAGGAGAAGCAGATGCCAAATCGCCGAGAAGCACTCCAAGCCCTCTaGCAATGGAGTTCCGAGAAGAAAGAATGGGGCGCAGTTTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: EEKQMPNRREALQAL*QWSSEKKEWGAVSR Trigger: CCTGGAAACTGCGCCCCATTCTTTCTTCTCGGAACTCCATTGCCAGAGGGCTTGGAGTGCTTCTCGGCGATTTGGCATCTGCTTCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS CCA 90 bp | TTCTCATCTTCCCATCCTCTGACGGAGCCAGTCCCACCCACCACGTaGACGTGGGTGTTGTCTGTGGACCAAGGTCAGTGTTTTGTTGGT | + |
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Preference number: 5 (lower is better) Translates to: FSSSHPLTEPVPPTT*TWVLSVDQGQCFVG Trigger: ACCAACAAAACACTGACCTTGGTCCACAGACAACACCCACGTCCACGTGGTGGGTGGGACTGGCTCCGTCAGAGGATGGGAAGATGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657431.1 |
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| CDS GCA 90 bp | TGCAAAGCTGGCACAACAGGCTGTACCCTTTTATGGGAGGGTCACTaGCATGCAGGAGAGGGGAGCAGTGTGGGTTGTGTGAGATTTCCT | + |
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Preference number: 5 (lower is better) Translates to: CKAGTTGCTLLWEGH*HAGEGSSVGCVRFP Trigger: AGGAAATCTCACACAACCCACACTGCTCCCCTCTCCTGCATGGCAGTGACCCTCCCATAAAAGGGTACAGCCTGTTGTGCCAGCTTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS GCA 90 bp | GAGCCCGCCTGGAGTCAAAAAGCCAGAGACTGCAATGATCCCAGTTaGAAAGCTGGCACAACAGGCTGTACCCTTTTATGGGAGGGTCAC | + |
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Preference number: 5 (lower is better) Translates to: EPAWSQKARDCNDPS*KAGTTGCTLLWEGH Trigger: GTGACCCTCCCATAAAAGGGTACAGCCTGTTGTGCCAGCTTTGCAACTGGGATCATTGCAGTCTCTGGCTTTTTGACTCCAGGCGGGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS CCA 90 bp | AAGCAGATGCCAAATCGCCGAGAAGCACTCCAAGCCCTCTGGCAATaGAGTTCCGAGAAGAAAGAATGGGGCGCAGTTTCCAGGTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: KQMPNRREALQALWQ*SSEKKEWGAVSRFC Trigger: GCAGAACCTGGAAACTGCGCCCCATTCTTTCTTCTCGGAACTCCATTGCCAGAGGGCTTGGAGTGCTTCTCGGCGATTTGGCATCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS CCA 90 bp | TCTTCCCATCCTCTGACGGAGCCAGTCCCACCCACCACGTGGACGTaGGTGTTGTCTGTGGACCAAGGTCAGTGTTTTGTTGGTTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: SSHPLTEPVPPTTWT*VLSVDQGQCFVGFS Trigger: AGAAAAACCAACAAAACACTGACCTTGGTCCACAGACAACACCCACGTCCACGTGGTGGGTGGGACTGGCTCCGTCAGAGGATGGGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657431.1 |
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| CDS TCA 90 bp | AGCTTCCCCCACAGAGAATCCCATTTAATATTCATAGGAAGCCAATaGGGCCTCTGTGGCTCCCACTGGCCTGACAAGGAAGAAGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: SFPHRESHLIFIGSQ*GLCGSHWPDKEEEA Trigger: GGCCTCTTCTTCCTTGTCAGGCCAGTGGGAGCCACAGAGGCCTCATTGGCTTCCTATGAATATTAAATGGGATTCTCTGTGGGGGAAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS GCA 90 bp | TTTCTTGCAATGAGAACTCTGAATGAGGGGCAGAGGAGAAGCAGATaGCAAATCGCCGAGAAGCACTCCAAGCCCTCTGGCAATGGAGTT | + |
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Preference number: 5 (lower is better) Translates to: FLAMRTLNEGQRRSR*QIAEKHSKPSGNGV Trigger: AACTCCATTGCCAGAGGGCTTGGAGTGCTTCTCGGCGATTTGGCATCTGCTTCTCCTCTGCCCCTCATTCAGAGTTCTCATTGCAAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS CCA 90 bp | CAGCATGTTTATCACACACTTGGTTACTCTCTGCAATGCTCCCTGTaGCTGGCACTATTCACCGTTTACGTCCTCACCACCCCATCAGGA | + |
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Preference number: 5 (lower is better) Translates to: QHVYHTLGYSLQCSL*LALFTVYVLTTPSG Trigger: TCCTGATGGGGTGGTGAGGACGTAAACGGTGAATAGTGCCAGCCACAGGGAGCATTGCAGAGAGTAACCAAGTGTGTGATAAACATGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS GCA 90 bp | CCATCAGGAAGACATGTAGGTTTAATCCCTACAGCCAGAGATTTCTaGAACGCCAGGGCACAAGCTTCTTACGTCGTCTTTGAAGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: PSGRHVGLIPTARDF*NARAQASYVVFEGA Trigger: TGCTCCTTCAAAGACGACGTAAGAAGCTTGTGCCCTGGCGTTGCAGAAATCTCTGGCTGTAGGGATTAAACCTACATGTCTTCCTGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS CCA 90 bp | CTCTTGGCCGTTTACACACATATGACAGCATGTTTATCACACACTTaGTTACTCTCTGCAATGCTCCCTGTGGCTGGCACTATTCACCGT | + |
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Preference number: 5 (lower is better) Translates to: LLAVYTHMTACLSHT*LLSAMLPVAGTIHR Trigger: ACGGTGAATAGTGCCAGCCACAGGGAGCATTGCAGAGAGTAACCAAGTGTGTGATAAACATGCTGTCATATGTGTGTAAACGGCCAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS GCA 90 bp | TTACACACATATGACAGCATGTTTATCACACACTTGGTTACTCTCTaGAATGCTCCCTGTGGCTGGCACTATTCACCGTTTACGTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: LHTYDSMFITHLVTL*NAPCGWHYSPFTSS Trigger: TGAGGACGTAAACGGTGAATAGTGCCAGCCACAGGGAGCATTGCAGAGAGTAACCAAGTGTGTGATAAACATGCTGTCATATGTGTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS CAA 90 bp | CGTGGCAGCTGCCGGGACCGGGCCTCTGAGTGCAGAGAGCAGGCGTaGCCAGGAGCGGACTCAGACAGTGGAGGCCCCTCGCTGACCCTC | + |
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Preference number: 6 (lower is better) Translates to: RGSCRDRASECREQA*PGADSDSGGPSLTL Trigger: GAGGGTCAGCGAGGGGCCTCCACTGTCTGAGTCCGCTCCTGGCAACGCCTGCTCTCTGCACTCAGAGGCCCGGTCCCGGCAGCTGCCACG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000439703.1 ENST00000449466.1 ENST00000634877.1 ENST00000651190.1 ENST00000657431.1 |
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| CDS CCA 72 bp | CAGAGAGCAGGCGTTGCCAGGAGCGGACTCAGACAGTaGAGGCCCCTCGCTGACCCTCTCCGGGGCCACTGC | + |
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Preference number: 6 (lower is better) Translates to: QRAGVARSGLRQ*RPLADPLRGHC Trigger: GCAGTGGCCCCGGAGAGGGTCAGCGAGGGGCCTCCACTGTCTGAGTCCGCTCCTGGCAACGCCTGCTCTCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000439703.1 ENST00000657431.1 |
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| CDS CCA 72 bp | CAGAGAGCAGGCGTTGCCAGGAGCGGACTCAGACAGTaGAGGCCCCTCGCTGACCCTCTCCGGGGCCACCTC | + |
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Preference number: 6 (lower is better) Translates to: QRAGVARSGLRQ*RPLADPLRGHL Trigger: GAGGTGGCCCCGGAGAGGGTCAGCGAGGGGCCTCCACTGTCTGAGTCCGCTCCTGGCAACGCCTGCTCTCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000634877.1 ENST00000651190.1 |
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| CDS GCA 72 bp | GAGCAACGTGGCAGCTGCCGGGACCGGGCCTCTGAGTaGAGAGAGCAGGCGTTGCCAGGAGCGGACTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: EQRGSCRDRASE*REQALPGADSD Trigger: GTCTGAGTCCGCTCCTGGCAACGCCTGCTCTCTGCACTCAGAGGCCCGGTCCCGGCAGCTGCCACGTTGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000439703.1 ENST00000449466.1 ENST00000634877.1 ENST00000651190.1 ENST00000657431.1 |
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| CDS CCA 72 bp | CAGAGAGCAGGCGTTGCCAGGAGCGGACTCAGACAGTaGAGGCCCCTCGCTGACCCTCTCCGGGGCCACAGA | + |
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Preference number: 6 (lower is better) Translates to: QRAGVARSGLRQ*RPLADPLRGHR Trigger: TCTGTGGCCCCGGAGAGGGTCAGCGAGGGGCCTCCACTGTCTGAGTCCGCTCCTGGCAACGCCTGCTCTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449466.1 |
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| CDS TCA 72 bp | TGCCAGGAGCGGACTCAGACAGTGGAGGCCCCTCGCTaGCCCTCTCCGGGGCCACTGCCTTGGCTCGTACAA | + |
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Preference number: 6 (lower is better) Translates to: CQERTQTVEAPR*PSPGPLPWLVQ Trigger: TTGTACGAGCCAAGGCAGTGGCCCCGGAGAGGGTCAGCGAGGGGCCTCCACTGTCTGAGTCCGCTCCTGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000439703.1 ENST00000657431.1 |
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| CDS CAA 72 bp | GCGTGTACCAGAGGGGGCTGGGCACACGCAGGCTTGTaGTTGGATGGAGGAGAGGCAGCATCCCCTGCATGC | + |
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Preference number: 6 (lower is better) Translates to: ACTRGGWAHAGL*LDGGEAASPAC Trigger: GCATGCAGGGGATGCTGCCTCTCCTCCATCCAACAACAAGCCTGCGTGTGCCCAGCCCCCTCTGGTACACGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000439703.1 ENST00000634877.1 ENST00000657431.1 |
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| CDS CCA 72 bp | CCGAGGATGGGGAGCAATGCGTGTACCAGAGGGGGCTaGGCACACGCAGGCTTGTTGTTGGATGGAGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: PRMGSNACTRGG*AHAGLLLDGGE Trigger: CTCTCCTCCATCCAACAACAAGCCTGCGTGTGCCCAGCCCCCTCTGGTACACGCATTGCTCCCCATCCTCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000439703.1 ENST00000634877.1 ENST00000657431.1 |
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| CDS GCA 72 bp | TTGTTGTTGGATGGAGGAGAGGCAGCATCCCCTGCATaGCTGGGTGGTCCCCATCTCCAGGCCTGCGACAAG | + |
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Preference number: 6 (lower is better) Translates to: LLLDGGEAASPA*LGGPHLQACDK Trigger: CTTGTCGCAGGCCTGGAGATGGGGACCACCCAGGCATGCAGGGGATGCTGCCTCTCCTCCATCCAACAACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000439703.1 ENST00000634877.1 ENST00000657431.1 |
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| CDS CCA 72 bp | TCCCATCCTCTGACGGAGCCAGTCCCACCCACCACGTaGACGTGGGTGTTGTCTGTGGACCAAGGTCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: SHPLTEPVPPTT*TWVLSVDQGQC Trigger: ACACTGACCTTGGTCCACAGACAACACCCACGTCCACGTGGTGGGTGGGACTGGCTCCGTCAGAGGATGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000439703.1 ENST00000657431.1 |
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| CDS CAA 72 bp | AATGCGTGTACCAGAGGGGGCTGGGCACACGCAGGCTaGTTGTTGGATGGAGGAGAGGCAGCATCCCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: NACTRGGWAHAG*LLDGGEAASPA Trigger: TGCAGGGGATGCTGCCTCTCCTCCATCCAACAACAAGCCTGCGTGTGCCCAGCCCCCTCTGGTACACGCATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000439703.1 ENST00000634877.1 ENST00000657431.1 |
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| CDS TCA 72 bp | ACTGCCATGCAGGAGAGGGGAGCAGTGTGGGTTGTGTaGGATTTCCTAGAGGTGCCTCTCGCCATGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: TAMQERGAVWVV*DFLEVPLAMAL Trigger: CAGGGCCATGGCGAGAGGCACCTCTAGGAAATCTCACACAACCCACACTGCTCCCCTCTCCTGCATGGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS TCA 72 bp | TCGCTGACCCTCTCCGGGGCCACCTCCATCATGTGCTaGAGGTCCTTCTCCAAATGCAGTCAACGTGGGGAT | + |
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Preference number: 6 (lower is better) Translates to: SLTLSGATSIMC*RSFSKCSQRGD Trigger: ATCCCCACGTTGACTGCATTTGGAGAAGGACCTTCAGCACATGATGGAGGTGGCCCCGGAGAGGGTCAGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000634877.1 ENST00000651190.1 |
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| CDS GCA 72 bp | GGCACGGAGCCCGCCTGGAGTCAAAAAGCCAGAGACTaGAATGATCCCAGTTGCAAAGCTGGCACAACAGGC | + |
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Preference number: 6 (lower is better) Translates to: GTEPAWSQKARD*NDPSCKAGTTG Trigger: GCCTGTTGTGCCAGCTTTGCAACTGGGATCATTGCAGTCTCTGGCTTTTTGACTCCAGGCGGGCTCCGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS CCA 72 bp | CCTCTGACGGAGCCAGTCCCACCCACCACGTGGACGTaGGTGTTGTCTGTGGACCAAGGTCAGTGTTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: PLTEPVPPTTWT*VLSVDQGQCFV Trigger: AACAAAACACTGACCTTGGTCCACAGACAACACCCACGTCCACGTGGTGGGTGGGACTGGCTCCGTCAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000439703.1 ENST00000657431.1 |
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| CDS TCA 72 bp | AGCAGACGTTATCTTCGGGATCCCCTGTCTTCCCCCTaGCCCTGTGAGGCTCACTGCTCTTCCCACTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: SRRYLRDPLSSP*PCEAHCSSHCC Trigger: ACAACAGTGGGAAGAGCAGTGAGCCTCACAGGGTCAGGGGGAAGACAGGGGATCCCGAAGATAACGTCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000651190.1 |
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| CDS CCA 72 bp | CAAGCCCTCTGGCAATGGAGTTCCGAGAAGAAAGAATaGGGCGCAGTTTCCAGGTTCTGCCTGCCCCTCCTA | + |
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Preference number: 6 (lower is better) Translates to: QALWQWSSEKKE*GAVSRFCLPLL Trigger: TAGGAGGGGCAGGCAGAACCTGGAAACTGCGCCCCATTCTTTCTTCTCGGAACTCCATTGCCAGAGGGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS TCA 72 bp | TTAGGGCTTCAACTTAGGGCCCGGGGCGGATGCAATTaGGTTCGTAGCAGACGTTATCTTCGGGATCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LGLQLRARGGCN*VRSRRYLRDPL Trigger: CAGGGGATCCCGAAGATAACGTCTGCTACGAACTCAATTGCATCCGCCCCGGGCCCTAAGTTGAAGCCCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000449466.1 ENST00000634877.1 ENST00000651190.1 |
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| CDS GCA 72 bp | TTAATCTCTCCTGGCCTTTCGGCAGCGTTTAACGTGTaGGACCCCTCCCTTCTCCTGTCTTCAGCCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LISPGLSAAFNV*DPSLLLSSAFL Trigger: GAGGAAGGCTGAAGACAGGAGAAGGGAGGGGTCGCACACGTTAAACGCTGCCGAAAGGCCAGGAGAGATTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651190.1 |
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| CDS CCA 72 bp | CCAAATCGCCGAGAAGCACTCCAAGCCCTCTGGCAATaGAGTTCCGAGAAGAAAGAATGGGGCGCAGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: PNRREALQALWQ*SSEKKEWGAVS Trigger: GGAAACTGCGCCCCATTCTTTCTTCTCGGAACTCCATTGCCAGAGGGCTTGGAGTGCTTCTCGGCGATTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS TCA 72 bp | CCAGGATTTGGGCATCTCGGTCCCTCCATCATGTGCTaGAGGTCCTTCTCCAAATGCAGTCAACGTGGGGAT | + |
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Preference number: 6 (lower is better) Translates to: PGFGHLGPSIMC*RSFSKCSQRGD Trigger: ATCCCCACGTTGACTGCATTTGGAGAAGGACCTTCAGCACATGATGGAGGGACCGAGATGCCCAAATCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449466.1 |
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| CDS TCA 72 bp | AGCAGACGTTATCTTCGGGATCCCCTGTCTTCCCCCTaGCCCTGTGAGGCTCACCTCAACTTCACTGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: SRRYLRDPLSSP*PCEAHLNFTVF Trigger: AAAAACAGTGAAGTTGAGGTGAGCCTCACAGGGTCAGGGGGAAGACAGGGGATCCCGAAGATAACGTCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449466.1 |
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| CDS GCA 72 bp | ATCAAAACAAAACAGAGTACTTTGGACTGCACTTTCTaGCAGCCACCACCCTCGAGCTCCTGGCCTGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: IKTKQSTLDCTF*QPPPSSSWPVQ Trigger: CTGCACAGGCCAGGAGCTCGAGGGTGGTGGCTGGCAGAAAGTGCAGTCCAAAGTACTCTGTTTTGTTTTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449466.1 |
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| CDS CCA 72 bp | AGACCGGGCAGAAAACACGCAGGTTTTGTTGCGAAGTaGAATGTGCTAGTGTGCTGTCTGCTCAACCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: RPGRKHAGFVAK*NVLVCCLLNQC Trigger: ACACTGGTTGAGCAGACAGCACACTAGCACATTCCACTTCGCAACAAAACCTGCGTGTTTTCTGCCCGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS CCA 72 bp | TATCACACACTTGGTTACTCTCTGCAATGCTCCCTGTaGCTGGCACTATTCACCGTTTACGTCCTCACCACC | + |
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Preference number: 6 (lower is better) Translates to: YHTLGYSLQCSL*LALFTVYVLTT Trigger: GGTGGTGAGGACGTAAACGGTGAATAGTGCCAGCCACAGGGAGCATTGCAGAGAGTAACCAAGTGTGTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS CAA 90 bp | CCTGACCCTGTGAGGCTCACTGCCTTGGCTCGTACAATGTCAGCTTaGCAAGGGGTTCTTCCAAGGTCTTATTTTCAATTGATCAATGCC | + |
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Preference number: 6 (lower is better) Translates to: PDPVRLTALARTMSA*QGVLPRSYFQLINA Trigger: GGCATTGATCAATTGAAAATAAGACCTTGGAAGAACCCCTTGCAAAGCTGACATTGTACGAGCCAAGGCAGTGAGCCTCACAGGGTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634877.1 |
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| CDS TCA 72 bp | CACAGAGAATCCCATTTAATATTCATAGGAAGCCAATaGGGCCTCTGTGGCTCCCACTGGCCTGACAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: HRESHLIFIGSQ*GLCGSHWPDKE Trigger: TTCCTTGTCAGGCCAGTGGGAGCCACAGAGGCCTCATTGGCTTCCTATGAATATTAAATGGGATTCTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS GCA 72 bp | TGGAGTCAAAAAGCCAGAGACTGCAATGATCCCAGTTaGAAAGCTGGCACAACAGGCTGTACCCTTTTATGG | + |
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Preference number: 6 (lower is better) Translates to: WSQKARDCNDPS*KAGTTGCTLLW Trigger: CCATAAAAGGGTACAGCCTGTTGTGCCAGCTTTGCAACTGGGATCATTGCAGTCTCTGGCTTTTTGACTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS CAA 72 bp | CCTTGCGGAGGTCACTCAGGCAAAAGCAGTGGTCTCTaGGCCGTTTACACACATATGACAGCATGTTTATCA | + |
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Preference number: 6 (lower is better) Translates to: PCGGHSGKSSGL*AVYTHMTACLS Trigger: TGATAAACATGCTGTCATATGTGTGTAAACGGCCAAGAGACCACTGCTTTTGCCTGAGTGACCTCCGCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS CAA 90 bp | TCTCTTGGCCGTTTACACACATATGACAGCATGTTTATCACACACTaGGTTACTCTCTGCAATGCTCCCTGTGGCTGGCACTATTCACCG | + |
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Preference number: 6 (lower is better) Translates to: SLGRLHTYDSMFITH*VTLCNAPCGWHYSP Trigger: CGGTGAATAGTGCCAGCCACAGGGAGCATTGCAGAGAGTAACCAAGTGTGTGATAAACATGCTGTCATATGTGTGTAAACGGCCAAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS CAA 90 bp | TTTCTGTGTCCTTGCGGAGGTCACTCAGGCAAAAGCAGTGGTCTCTaGGCCGTTTACACACATATGACAGCATGTTTATCACACACTTGG | + |
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Preference number: 6 (lower is better) Translates to: FLCPCGGHSGKSSGL*AVYTHMTACLSHTW Trigger: CCAAGTGTGTGATAAACATGCTGTCATATGTGTGTAAACGGCCAAGAGACCACTGCTTTTGCCTGAGTGACCTCCGCAAGGACACAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS GCA 72 bp | AGACATGTAGGTTTAATCCCTACAGCCAGAGATTTCTaGAACGCCAGGGCACAAGCTTCTTACGTCGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: RHVGLIPTARDF*NARAQASYVVF Trigger: AAAGACGACGTAAGAAGCTTGTGCCCTGGCGTTGCAGAAATCTCTGGCTGTAGGGATTAAACCTACATGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS CCA 72 bp | TCACTGCTCTTCCCACTGTTGTCAATAACCGCAGCCTaGCCGAATCCAGTGATTCATTTCTGTCTTAATCTC | + |
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Preference number: 6 (lower is better) Translates to: SLLFPLLSITAA*PNPVIHFCLNL Trigger: GAGATTAAGACAGAAATGAATCACTGGATTCGGCCAGGCTGCGGTTATTGACAACAGTGGGAAGAGCAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651190.1 |
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| CDS CAA 72 bp | GTGAGGCTCACTGCCTTGGCTCGTACAATGTCAGCTTaGCAAGGGGTTCTTCCAAGGTCTTATTTTCAATTG | + |
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Preference number: 6 (lower is better) Translates to: VRLTALARTMSA*QGVLPRSYFQL Trigger: CAATTGAAAATAAGACCTTGGAAGAACCCCTTGCAAAGCTGACATTGTACGAGCCAAGGCAGTGAGCCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634877.1 |
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| CDS CAA 72 bp | CGTTTACACACATATGACAGCATGTTTATCACACACTaGGTTACTCTCTGCAATGCTCCCTGTGGCTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: RLHTYDSMFITH*VTLCNAPCGWH Trigger: GTGCCAGCCACAGGGAGCATTGCAGAGAGTAACCAAGTGTGTGATAAACATGCTGTCATATGTGTGTAAACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS GCA 72 bp | TATGACAGCATGTTTATCACACACTTGGTTACTCTCTaGAATGCTCCCTGTGGCTGGCACTATTCACCGTTT | + |
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Preference number: 6 (lower is better) Translates to: YDSMFITHLVTL*NAPCGWHYSPF Trigger: AAACGGTGAATAGTGCCAGCCACAGGGAGCATTGCAGAGAGTAACCAAGTGTGTGATAAACATGCTGTCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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| CDS CCA 72 bp | GTTTACACACATATGACAGCATGTTTATCACACACTTaGTTACTCTCTGCAATGCTCCCTGTGGCTGGCACT | + |
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Preference number: 6 (lower is better) Translates to: VYTHMTACLSHT*LLSAMLPVAGT Trigger: AGTGCCAGCCACAGGGAGCATTGCAGAGAGTAACCAAGTGTGTGATAAACATGCTGTCATATGTGTGTAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651190.1 ENST00000657431.1 |
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