Pregenerated sensors for LINC01605 (Homo sapiens)
Ensembl gene IDs: ENSG00000253161, ENSG00000253414Ensembl transcript IDs: ENST00000517363.1, ENST00000519738.5, ENST00000520422.5, ENST00000521989.2, ENST00000522718.5, ENST00000665151.1, ENST00000668286.1
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCTGGGCCCCCTCTGCGAGACCAGGCCTGTAGCAGACGCCTCACCTaGCCGCGGTGTGAGGGAGGAAGCCTGAAAGTCCAAGCCTCATGG | + |
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Preference number: 5 (lower is better) Translates to: AGPPLRDQACSRRLT*PRCEGGSLKVQASW Trigger: CCATGAGGCTTGGACTTTCAGGCTTCCTCCCTCACACCGCGGGCAGGTGAGGCGTCTGCTACAGGCCTGGTCTCGCAGAGGGGGCCCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000520422.5 ENST00000522718.5 |
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| CDS CCA 90 bp | CGCCATCACCTCCACATGACATCGAAACGCTTCCTGCAGCTCATCTaGGACGGAGTGGCCATTCACTGTCCCGGCACAGCCAGAACCCTG | + |
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Preference number: 5 (lower is better) Translates to: RHHLHMTSKRFLQLI*DGVAIHCPGTARTL Trigger: CAGGGTTCTGGCTGTGCCGGGACAGTGAATGGCCACTCCGTCCCAGATGAGCTGCAGGAAGCGTTTCGATGTCATGTGGAGGTGATGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517363.1 ENST00000519738.5 |
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| CDS CCA 90 bp | CTTATTCTTCAAGACTCCGTTCTAGGGCCACGATGTGGAGGGAGCTaGGTGGCTGGCTGCCTGGGCTTCCTCCCGGCTGCTCATTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: LILQDSVLGPRCGGS*VAGCLGFLPAAHFC Trigger: GCAGAAATGAGCAGCCGGGAGGAAGCCCAGGCAGCCAGCCACCCAGCTCCCTCCACATCGTGGCCCTAGAACGGAGTCTTGAAGAATAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522718.5 |
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| CDS TCA 90 bp | TTAGGCACAATTGGGGAAAGCCCTGGTATGCCCCAGCCTCTTCCATaGCATCCAGAAACAACCGCACCCACCACCGGCACCATGCAAGGT | + |
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Preference number: 5 (lower is better) Translates to: LGTIGESPGMPQPLP*HPETTAPTTGTMQG Trigger: ACCTTGCATGGTGCCGGTGGTGGGTGCGGTTGTTTCTGGATGTCATGGAAGAGGCTGGGGCATACCAGGGCTTTCCCCAATTGTGCCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000521989.2 ENST00000665151.1 ENST00000668286.1 |
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| CDS CCA 90 bp | GCCAGTGACCTTTGCGAAGTACACAAGGTACGCTGGCAGGGCCAGTaGCAGGAAGGGAGGGACAAGTGGACAGTGGTGTGTCTGAATTGT | + |
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Preference number: 5 (lower is better) Translates to: ASDLCEVHKVRWQGQ*QEGRDKWTVVCLNC Trigger: ACAATTCAGACACACCACTGTCCACTTGTCCCTCCCTTCCTGCCACTGGCCCTGCCAGCGTACCTTGTGTACTTCGCAAAGGTCACTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521989.2 ENST00000665151.1 ENST00000668286.1 |
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| CDS CCA 90 bp | CATAAAACAGGAGCCAGTGACCTTTGCGAAGTACACAAGGTACGCTaGCAGGGCCAGTGGCAGGAAGGGAGGGACAAGTGGACAGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: HKTGASDLCEVHKVR*QGQWQEGRDKWTVV Trigger: CACCACTGTCCACTTGTCCCTCCCTTCCTGCCACTGGCCCTGCCAGCGTACCTTGTGTACTTCGCAAAGGTCACTGGCTCCTGTTTTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000521989.2 ENST00000665151.1 ENST00000668286.1 |
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| CDS GCA 90 bp | CTCTTCCATGACATCCAGAAACAACCGCACCCACCACCGGCACCATaGAAGGTGTCTGTTCACATTGCTGAGCTGGGCGAGATCGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: LFHDIQKQPHPPPAP*KVSVHIAELGEIVC Trigger: ACAGACGATCTCGCCCAGCTCAGCAATGTGAACAGACACCTTGCATGGTGCCGGTGGTGGGTGCGGTTGTTTCTGGATGTCATGGAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521989.2 ENST00000665151.1 ENST00000668286.1 |
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| CDS CCA 90 bp | ACCCACCACCGGCACCATGCAAGGTGTCTGTTCACATTGCTGAGCTaGGCGAGATCGTCTGTCAGTCATTACATAAAACAGGAGCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: THHRHHARCLFTLLS*ARSSVSHYIKQEPV Trigger: CACTGGCTCCTGTTTTATGTAATGACTGACAGACGATCTCGCCCAGCTCAGCAATGTGAACAGACACCTTGCATGGTGCCGGTGGTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000521989.2 ENST00000665151.1 ENST00000668286.1 |
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| CDS CCA 90 bp | CATCTCTTAAGCTGTGTTGCTGGAATCTGGACTTTCCATTCAAGCTaGGGCCCATCAATCACTCGGCGGCTCCTGCTTGGAGAAGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: HLLSCVAGIWTFHSS*GPSITRRLLLGEAE Trigger: CTCTGCTTCTCCAAGCAGGAGCCGCCGAGTGATTGATGGGCCCCAGCTTGAATGGAAAGTCCAGATTCCAGCAACACAGCTTAAGAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668286.1 |
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| CDS CCA 90 bp | ACCTGCCCGCGGTGTGAGGGAGGAAGCCTGAAAGTCCAAGCCTCATaGAGGTTAAAGTCTAATGTAGACCAAGTCCAAGTTCGATGGAGA | + |
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Preference number: 5 (lower is better) Translates to: TCPRCEGGSLKVQAS*RLKSNVDQVQVRWR Trigger: TCTCCATCGAACTTGGACTTGGTCTACATTAGACTTTAACCTCCATGAGGCTTGGACTTTCAGGCTTCCTCCCTCACACCGCGGGCAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520422.5 ENST00000522718.5 |
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| CDS CCA 90 bp | TCCTGCTCAAGCAACCTTCATCTCTTAAGCTGTGTTGCTGGAATCTaGACTTTCCATTCAAGCTGGGGCCCATCAATCACTCGGCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: SCSSNLHLLSCVAGI*TFHSSWGPSITRRL Trigger: GAGCCGCCGAGTGATTGATGGGCCCCAGCTTGAATGGAAAGTCCAGATTCCAGCAACACAGCTTAAGAGATGAAGGTTGCTTGAGCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668286.1 |
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| CDS CCA 90 bp | GCCTCATGGAGGTTAAAGTCTAATGTAGACCAAGTCCAAGTTCGATaGAGAGCCTTAGACTCCTCCTTTAGGCCTCTTGACCCCTTAGCG | + |
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Preference number: 5 (lower is better) Translates to: ASWRLKSNVDQVQVR*RALDSSFRPLDPLA Trigger: CGCTAAGGGGTCAAGAGGCCTAAAGGAGGAGTCTAAGGCTCTCCATCGAACTTGGACTTGGTCTACATTAGACTTTAACCTCCATGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000520422.5 ENST00000522718.5 |
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| CDS CCA 90 bp | CATCTAAGCCCAGGGAGGTGTAAGGAACAGGCCACATCTGGTTCTTaGAAGTATATGCCCAGGCATTTAAAGCGGATCTTTCCTCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: HLSPGRCKEQATSGS*KYMPRHLKRIFPLW Trigger: CCAAAGAGGAAAGATCCGCTTTAAATGCCTGGGCATATACTTCCAAGAACCAGATGTGGCCTGTTCCTTACACCTCCCTGGGCTTAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521989.2 ENST00000665151.1 ENST00000668286.1 |
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| CDS TCA 90 bp | CTCTTTCTTCTCTGTAGAACACGTGCAGTGTCTGCCAGTTCAGTCTaGATCCAGCTGTTTCCCTGGAACAGACTGTTACCGATTCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: LFLLCRTRAVSASSV*IQLFPWNRLLPIQQ Trigger: TTGCTGAATCGGTAACAGTCTGTTCCAGGGAAACAGCTGGATTCAGACTGAACTGGCAGACACTGCACGTGTTCTACAGAGAAGAAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519738.5 |
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| CDS CCA 90 bp | TATGCCCAGGCATTTAAAGCGGATCTTTCCTCTTTGGGCCATGGGTaGATTTCCTGCTCAAGCAACCTTCATCGTTTCTGCTCTGGTTTT | + |
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Preference number: 5 (lower is better) Translates to: YAQAFKADLSSLGHG*ISCSSNLHRFCSGF Trigger: AAAACCAGAGCAGAAACGATGAAGGTTGCTTGAGCAGGAAATCCACCCATGGCCCAAAGAGGAAAGATCCGCTTTAAATGCCTGGGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665151.1 |
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| CDS CCA 90 bp | TATGCCCAGGCATTTAAAGCGGATCTTTCCTCTTTGGGCCATGGGTaGATTTCCTGCTCAAGCAACCTTCATCTCTTAAGCTGTGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: YAQAFKADLSSLGHG*ISCSSNLHLLSCVA Trigger: AGCAACACAGCTTAAGAGATGAAGGTTGCTTGAGCAGGAAATCCACCCATGGCCCAAAGAGGAAAGATCCGCTTTAAATGCCTGGGCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668286.1 |
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| CDS TCA 90 bp | GGGTGGATTTCCTGCTCAAGCAACCTTCATCTAGAGAGGGCAAGATaGGGAATGTATTTGATGCTCACTTCTCTCTCAGAAAAACCCTCC | + |
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Preference number: 5 (lower is better) Translates to: GWISCSSNLHLERAR*GMYLMLTSLSEKPS Trigger: GGAGGGTTTTTCTGAGAGAGAAGTGAGCATCAAATACATTCCTCATCTTGCCCTCTCTAGATGAAGGTTGCTTGAGCAGGAAATCCACCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521989.2 |
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| CDS CCA 90 bp | TCTTGGAAGTATATGCCCAGGCATTTAAAGCGGATCTTTCCTCTTTaGGCCATGGGTGGATTTCCTGCTCAAGCAACCTTCATCGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: SWKYMPRHLKRIFPL*AMGGFPAQATFIVS Trigger: AGAAACGATGAAGGTTGCTTGAGCAGGAAATCCACCCATGGCCCAAAGAGGAAAGATCCGCTTTAAATGCCTGGGCATATACTTCCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665151.1 |
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| CDS GCA 72 bp | GCTGGCTGCCTGGGCTTCCTCCCGGCTGCTCATTTCTaGCTGTGGGACAGCCATCCCCATGTGTCGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: AGCLGFLPAAHF*LWDSHPHVSLW Trigger: CCACAGCGACACATGGGGATGGCTGTCCCACAGGCAGAAATGAGCAGCCGGGAGGAAGCCCAGGCAGCCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000520422.5 ENST00000522718.5 |
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| CDS GCA 72 bp | CCTCTGCGAGACCAGGCCTGTAGCAGACGCCTCACCTaGCCGCGGTGTGAGGGAGGAAGCCTGAAAGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: PLRDQACSRRLT*PRCEGGSLKVQ Trigger: TTGGACTTTCAGGCTTCCTCCCTCACACCGCGGGCAGGTGAGGCGTCTGCTACAGGCCTGGTCTCGCAGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520422.5 ENST00000522718.5 |
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| CDS GCA 72 bp | CCCGCCCAGGGTGTTAACCCCAGTGTGCTTCAAGGATaGACGTGCCCAAGTGCTAAGTGGGAGCCGCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: PAQGVNPSVLQG*TCPSAKWEPQC Trigger: ACACTGCGGCTCCCACTTAGCACTTGGGCACGTGCATCCTTGAAGCACACTGGGGTTAACACCCTGGGCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519738.5 |
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| CDS CCA 72 bp | CATCGAAACGCTTCCTGCAGCTCATCTGGGACGGAGTaGCCATTCACTGTCCCGGCACAGCCAGAACCCTGG | + |
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Preference number: 6 (lower is better) Translates to: HRNASCSSSGTE*PFTVPAQPEPW Trigger: CCAGGGTTCTGGCTGTGCCGGGACAGTGAATGGCCACTCCGTCCCAGATGAGCTGCAGGAAGCGTTTCGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517363.1 ENST00000519738.5 |
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| CDS CCA 72 bp | GGAGCCAGTGACCTTTGCGAAGTACACAAGGTACGCTaGCAGGGCCAGTGGCAGGAAGGGAGGGACAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: GASDLCEVHKVR*QGQWQEGRDKW Trigger: CCACTTGTCCCTCCCTTCCTGCCACTGGCCCTGCCAGCGTACCTTGTGTACTTCGCAAAGGTCACTGGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521989.2 ENST00000665151.1 ENST00000668286.1 |
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| CDS TCA 72 bp | TTAATTAGCTGCTGGCGCGCAAGCGGGGCTGGGTGCTaGCGTGCTGCTTTCCCACAGGTCCCATTCTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: LISCWRASGAGC*RAAFPQVPFCH Trigger: GTGACAGAATGGGACCTGTGGGAAAGCAGCACGTCAGCACCCAGCCCCGCTTGCGCGCCAGCAGCTAATTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000520422.5 ENST00000522718.5 |
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| CDS TCA 72 bp | ATTGGGGAAAGCCCTGGTATGCCCCAGCCTCTTCCATaGCATCCAGAAACAACCGCACCCACCACCGGCACC | + |
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Preference number: 6 (lower is better) Translates to: IGESPGMPQPLP*HPETTAPTTGT Trigger: GGTGCCGGTGGTGGGTGCGGTTGTTTCTGGATGTCATGGAAGAGGCTGGGGCATACCAGGGCTTTCCCCAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000521989.2 ENST00000665151.1 ENST00000668286.1 |
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| CDS CCA 72 bp | CTCCACATGACATCGAAACGCTTCCTGCAGCTCATCTaGGACGGAGTGGCCATTCACTGTCCCGGCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: LHMTSKRFLQLI*DGVAIHCPGTA Trigger: GGCTGTGCCGGGACAGTGAATGGCCACTCCGTCCCAGATGAGCTGCAGGAAGCGTTTCGATGTCATGTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517363.1 ENST00000519738.5 |
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| CDS CCA 72 bp | GAGTGGCCATTCACTGTCCCGGCACAGCCAGAACCCTaGCAGGACTGGCTACTAGAGCAGGAACTCTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: EWPFTVPAQPEP*QDWLLEQELSL Trigger: AAGGGAGAGTTCCTGCTCTAGTAGCCAGTCCTGCCAGGGTTCTGGCTGTGCCGGGACAGTGAATGGCCACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517363.1 |
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| CDS GCA 72 bp | GACATCCAGAAACAACCGCACCCACCACCGGCACCATaGAAGGTGTCTGTTCACATTGCTGAGCTGGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: DIQKQPHPPPAP*KVSVHIAELGE Trigger: CTCGCCCAGCTCAGCAATGTGAACAGACACCTTGCATGGTGCCGGTGGTGGGTGCGGTTGTTTCTGGATGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521989.2 ENST00000665151.1 ENST00000668286.1 |
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| CDS GCA 72 bp | GACTCCTCCTTTAGGCCTCTTGACCCCTTAGCGATGTaGCCTCAGACCCATGTTCCCTCTCTCCAGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: DSSFRPLDPLAM*PQTHVPSLQPS Trigger: AGAAGGCTGGAGAGAGGGAACATGGGTCTGAGGGCACATCGCTAAGGGGTCAAGAGGCCTAAAGGAGGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000520422.5 ENST00000522718.5 |
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| CDS GCA 72 bp | CAGGGTGTTAACCCCAGTGTGCTTCAAGGATGCACGTaGCCAAGTGCTAAGTGGGAGCCGCAGTGTTCACTT | + |
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Preference number: 6 (lower is better) Translates to: QGVNPSVLQGCT*PSAKWEPQCSL Trigger: AAGTGAACACTGCGGCTCCCACTTAGCACTTGGGCACGTGCATCCTTGAAGCACACTGGGGTTAACACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519738.5 |
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| CDS CCA 72 bp | AGCTGTGTTGCTGGAATCTGGACTTTCCATTCAAGCTaGGGCCCATCAATCACTCGGCGGCTCCTGCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: SCVAGIWTFHSS*GPSITRRLLLG Trigger: TCCAAGCAGGAGCCGCCGAGTGATTGATGGGCCCCAGCTTGAATGGAAAGTCCAGATTCCAGCAACACAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668286.1 |
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| CDS CAA 90 bp | AACAACCGCACCCACCACCGGCACCATGCAAGGTGTCTGTTCACATaGCTGAGCTGGGCGAGATCGTCTGTCAGTCATTACATAAAACAG | + |
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Preference number: 6 (lower is better) Translates to: NNRTHHRHHARCLFT*LSWARSSVSHYIKQ Trigger: CTGTTTTATGTAATGACTGACAGACGATCTCGCCCAGCTCAGCAATGTGAACAGACACCTTGCATGGTGCCGGTGGTGGGTGCGGTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000521989.2 ENST00000665151.1 ENST00000668286.1 |
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| CDS TCA 72 bp | CTCTGTAGAACACGTGCAGTGTCTGCCAGTTCAGTCTaGATCCAGCTGTTTCCCTGGAACAGACTGTTACCG | + |
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Preference number: 6 (lower is better) Translates to: LCRTRAVSASSV*IQLFPWNRLLP Trigger: CGGTAACAGTCTGTTCCAGGGAAACAGCTGGATTCAGACTGAACTGGCAGACACTGCACGTGTTCTACAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519738.5 |
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| CDS CAA 72 bp | GAGAGATATTGTTCTTCCAGGCCAGGCAGAAGGTACTaGAACTCGGTAGGAAGGTCGGCTGTTTGTAACGGG | + |
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Preference number: 6 (lower is better) Translates to: ERYCSSRPGRRY*NSVGRSAVCNG Trigger: CCCGTTACAAACAGCCGACCTTCCTACCGAGTTCAAGTACCTTCTGCCTGGCCTGGAAGAACAATATCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000519738.5 ENST00000520422.5 ENST00000522718.5 |
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| CDS CAA 90 bp | AGGGAGACAGAGAGATATTGTTCTTCCAGGCCAGGCAGAAGGTACTaGAACTCGGTAGGAAGGTCGGCTGTTTGTAACGGGAATGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: RETERYCSSRPGRRY*NSVGRSAVCNGNEL Trigger: CAACTCATTCCCGTTACAAACAGCCGACCTTCCTACCGAGTTCAAGTACCTTCTGCCTGGCCTGGAAGAACAATATCTCTCTGTCTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000519738.5 ENST00000520422.5 ENST00000522718.5 |
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| CDS CCA 72 bp | CGGCACCATGCAAGGTGTCTGTTCACATTGCTGAGCTaGGCGAGATCGTCTGTCAGTCATTACATAAAACAG | + |
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Preference number: 6 (lower is better) Translates to: RHHARCLFTLLS*ARSSVSHYIKQ Trigger: CTGTTTTATGTAATGACTGACAGACGATCTCGCCCAGCTCAGCAATGTGAACAGACACCTTGCATGGTGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000521989.2 ENST00000665151.1 ENST00000668286.1 |
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| CDS CCA 72 bp | CGGTGTGAGGGAGGAAGCCTGAAAGTCCAAGCCTCATaGAGGTTAAAGTCTAATGTAGACCAAGTCCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: RCEGGSLKVQAS*RLKSNVDQVQV Trigger: AACTTGGACTTGGTCTACATTAGACTTTAACCTCCATGAGGCTTGGACTTTCAGGCTTCCTCCCTCACACCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520422.5 ENST00000522718.5 |
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| CDS CAA 72 bp | GTATATGCCCAGGCATTTAAAGCGGATCTTTCCTCTTaGGGCCATGGGTGGATTTCCTGCTCAAGCAACCTT | + |
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Preference number: 6 (lower is better) Translates to: VYAQAFKADLSS*GHGWISCSSNL Trigger: AAGGTTGCTTGAGCAGGAAATCCACCCATGGCCCAAAGAGGAAAGATCCGCTTTAAATGCCTGGGCATATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000521989.2 ENST00000665151.1 ENST00000668286.1 |
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| CDS CAA 90 bp | TTCTTGGAAGTATATGCCCAGGCATTTAAAGCGGATCTTTCCTCTTaGGGCCATGGGTGGATTTCCTGCTCAAGCAACCTTCATCTAGAG | + |
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Preference number: 6 (lower is better) Translates to: FLEVYAQAFKADLSS*GHGWISCSSNLHLE Trigger: CTCTAGATGAAGGTTGCTTGAGCAGGAAATCCACCCATGGCCCAAAGAGGAAAGATCCGCTTTAAATGCCTGGGCATATACTTCCAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521989.2 |
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| CDS CAA 90 bp | TTCTTGGAAGTATATGCCCAGGCATTTAAAGCGGATCTTTCCTCTTaGGGCCATGGGTGGATTTCCTGCTCAAGCAACCTTCATCGTTTC | + |
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Preference number: 6 (lower is better) Translates to: FLEVYAQAFKADLSS*GHGWISCSSNLHRF Trigger: GAAACGATGAAGGTTGCTTGAGCAGGAAATCCACCCATGGCCCAAAGAGGAAAGATCCGCTTTAAATGCCTGGGCATATACTTCCAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665151.1 |
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| CDS CAA 72 bp | TCGGTAGGAAGGTCGGCTGTTTGTAACGGGAATGAGTaGAAAATCGCCATCACCTTCCTGGCTTTAATTAGC | + |
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Preference number: 6 (lower is better) Translates to: SVGRSAVCNGNE*KIAITFLALIS Trigger: GCTAATTAAAGCCAGGAAGGTGATGGCGATTTTCAACTCATTCCCGTTACAAACAGCCGACCTTCCTACCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000520422.5 ENST00000522718.5 |
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| CDS CAA 90 bp | TTCTTGGAAGTATATGCCCAGGCATTTAAAGCGGATCTTTCCTCTTaGGGCCATGGGTGGATTTCCTGCTCAAGCAACCTTCATCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: FLEVYAQAFKADLSS*GHGWISCSSNLHLL Trigger: TAAGAGATGAAGGTTGCTTGAGCAGGAAATCCACCCATGGCCCAAAGAGGAAAGATCCGCTTTAAATGCCTGGGCATATACTTCCAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668286.1 |
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| CDS CCA 72 bp | AGGTTAAAGTCTAATGTAGACCAAGTCCAAGTTCGATaGAGAGCCTTAGACTCCTCCTTTAGGCCTCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: RLKSNVDQVQVR*RALDSSFRPLD Trigger: GTCAAGAGGCCTAAAGGAGGAGTCTAAGGCTCTCCATCGAACTTGGACTTGGTCTACATTAGACTTTAACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520422.5 ENST00000522718.5 |
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