Pregenerated sensors for LINC01600 (Homo sapiens)
Ensembl gene IDs: ENSG00000164385Ensembl transcript IDs: ENST00000624527.3, ENST00000653895.1, ENST00000666762.1, ENST00000670876.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGGAGCCTGGCTAGTCCTGCCCCCAGGCTTAGCGGCGGCTCTTCCTaGAGTCCTGCTGACCGGAAGGAACGTCACAAACATCTCCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: GSLASPAPRLSGGSS*SPADRKERHKHLLP Trigger: GGGCAGGAGATGTTTGTGACGTTCCTTCCGGTCAGCAGGACTTCAGGAAGAGCCGCCGCTAAGCCTGGGGGCAGGACTAGCCAGGCTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666762.1 |
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| CDS GCA 90 bp | GCCCCCTTAGAGCGGGCCTGGCTCCTGGCTGGCAGAGTGGCTCCATaGCATCAAATGCCCTTTCTCCCTCGGGAGACAGGGAAGCAAAGC | + |
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Preference number: 5 (lower is better) Translates to: APLERAWLLAGRVAP*HQMPFLPRETGKQS Trigger: GCTTTGCTTCCCTGTCTCCCGAGGGAGAAAGGGCATTTGATGGCATGGAGCCACTCTGCCAGCCAGGAGCCAGGCCCGCTCTAAGGGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS GCA 90 bp | CACTCCGCACCCAAAGGGTGCCATCTGAGGTTAGGATCGAGGGGCTaGCGGTGCTGGCAGGTGCTCGTTCTCTCCTGTAATGAGGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: HSAPKGCHLRLGSRG*RCWQVLVLSCNEEG Trigger: CCCCTCCTCATTACAGGAGAGAACGAGCACCTGCCAGCACCGGCAGCCCCTCGATCCTAACCTCAGATGGCACCCTTTGGGTGCGGAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS CCA 90 bp | TCTGAGGCATGCTGTAGCCCCCTTAGAGCGGGCCTGGCTCCTGGCTaGCAGAGTGGCTCCATGCCATCAAATGCCCTTTCTCCCTCGGGA | + |
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Preference number: 5 (lower is better) Translates to: SEACCSPLRAGLAPG*QSGSMPSNALSPSG Trigger: TCCCGAGGGAGAAAGGGCATTTGATGGCATGGAGCCACTCTGCCAGCCAGGAGCCAGGCCCGCTCTAAGGGGGCTACAGCATGCCTCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS GCA 90 bp | GCACCCAAAGGGTGCCATCTGAGGTTAGGATCGAGGGGCTGCCGGTaGTGGCAGGTGCTCGTTCTCTCCTGTAATGAGGAGGGGCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: APKGCHLRLGSRGCR*WQVLVLSCNEEGLR Trigger: TCTGAGCCCCTCCTCATTACAGGAGAGAACGAGCACCTGCCAGCACCGGCAGCCCCTCGATCCTAACCTCAGATGGCACCCTTTGGGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS CCA 90 bp | CCCAAAGGGTGCCATCTGAGGTTAGGATCGAGGGGCTGCCGGTGCTaGCAGGTGCTCGTTCTCTCCTGTAATGAGGAGGGGCTCAGACAG | + |
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Preference number: 5 (lower is better) Translates to: PKGCHLRLGSRGCRC*QVLVLSCNEEGLRQ Trigger: CTGTCTGAGCCCCTCCTCATTACAGGAGAGAACGAGCACCTGCCAGCACCGGCAGCCCCTCGATCCTAACCTCAGATGGCACCCTTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS CCA 90 bp | GCCTGTAGCAATCTGAGGCATGCTGTAGCCCCCTTAGAGCGGGCCTaGCTCCTGGCTGGCAGAGTGGCTCCATGCCATCAAATGCCCTTT | + |
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Preference number: 5 (lower is better) Translates to: ACSNLRHAVAPLERA*LLAGRVAPCHQMPF Trigger: AAAGGGCATTTGATGGCATGGAGCCACTCTGCCAGCCAGGAGCCAGGCCCGCTCTAAGGGGGCTACAGCATGCCTCAGATTGCTACAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS TCA 90 bp | GGCCGTTCCTCAGAGGCAACTTCCGGGAGAAAGCTGGACCTGCTTTaGGGCTCACCTCCCTGCATGCACATCCATCCGGCTTCTCTCAAG | + |
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Preference number: 5 (lower is better) Translates to: GRSSEATSGRKLDLL*GSPPCMHIHPASLK Trigger: CTTGAGAGAAGCCGGATGGATGTGCATGCAGGGAGGTGAGCCTCAAAGCAGGTCCAGCTTTCTCCCGGAAGTTGCCTCTGAGGAACGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670876.1 |
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| CDS GCA 90 bp | CTTCCGGGAGAAAGCTGGACCTGCTTTGAGGCTCACCTCCCTGCATaGACATCCATCCGGCTTCTCTCAAGAAGCAACCTGGTGTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: LPGESWTCFEAHLPA*TSIRLLSRSNLVSE Trigger: CTCAGACACCAGGTTGCTTCTTGAGAGAAGCCGGATGGATGTGCATGCAGGGAGGTGAGCCTCAAAGCAGGTCCAGCTTTCTCCCGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670876.1 |
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| CDS CCA 90 bp | CCCTCCCTGCATGCACATCCATCCGGCTTCTCTCAAGAAGCAACCTaGTGTCTGAGAGCCGTTGAGTCTTCATCCCAGCTCTGGTATTTC | + |
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Preference number: 5 (lower is better) Translates to: PSLHAHPSGFSQEAT*CLRAVESSSQLWYF Trigger: GAAATACCAGAGCTGGGATGAAGACTCAACGGCTCTCAGACACCAGGTTGCTTCTTGAGAGAAGCCGGATGGATGTGCATGCAGGGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624527.3 |
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| CDS CCA 90 bp | GCCTCCCTGCATGCACATCCATCCGGCTTCTCTCAAGAAGCAACCTaGTGTCTGAGAGCCGTTGAGTCTTCATCCCAGCTCTGGTATTTC | + |
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Preference number: 5 (lower is better) Translates to: ASLHAHPSGFSQEAT*CLRAVESSSQLWYF Trigger: GAAATACCAGAGCTGGGATGAAGACTCAACGGCTCTCAGACACCAGGTTGCTTCTTGAGAGAAGCCGGATGGATGTGCATGCAGGGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666762.1 |
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| CDS TCA 90 bp | TGGTACAGGGAGAGACGTCAGAAAGCTTCATTGCTAATCTCCCTCTaGCGGAAGATGGTTTCTGGGCTTCTCAGATGGCAGGGAGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: WYRERRQKASLLISL*RKMVSGLLRWQGVA Trigger: GGCCACTCCCTGCCATCTGAGAAGCCCAGAAACCATCTTCCGTCAGAGGGAGATTAGCAATGAAGCTTTCTGACGTCTCTCCCTGTACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS CCA 90 bp | TCCTCCCTGCATGCACATCCATCCGGCTTCTCTCAAGAAGCAACCTaGTGTCTGAGAGCCGTTGAGTCTTCATCCCAGCTCTGGTATTTC | + |
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Preference number: 5 (lower is better) Translates to: SSLHAHPSGFSQEAT*CLRAVESSSQLWYF Trigger: GAAATACCAGAGCTGGGATGAAGACTCAACGGCTCTCAGACACCAGGTTGCTTCTTGAGAGAAGCCGGATGGATGTGCATGCAGGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653895.1 |
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| CDS CCA 90 bp | ACCTCCCTGCATGCACATCCATCCGGCTTCTCTCAAGAAGCAACCTaGTGTCTGAGAGCCGTTGAGTCTTCATCCCAGCTCTGGTATTTC | + |
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Preference number: 5 (lower is better) Translates to: TSLHAHPSGFSQEAT*CLRAVESSSQLWYF Trigger: GAAATACCAGAGCTGGGATGAAGACTCAACGGCTCTCAGACACCAGGTTGCTTCTTGAGAGAAGCCGGATGGATGTGCATGCAGGGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670876.1 |
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| CDS TCA 90 bp | TCCATCCGGCTTCTCTCAAGAAGCAACCTGGTGTCTGAGAGCCGTTaGGTCTTCATCCCAGCTCTGGTATTTCTCTCATGTGGCCACATA | + |
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Preference number: 5 (lower is better) Translates to: SIRLLSRSNLVSESR*VFIPALVFLSCGHI Trigger: TATGTGGCCACATGAGAGAAATACCAGAGCTGGGATGAAGACTCAACGGCTCTCAGACACCAGGTTGCTTCTTGAGAGAAGCCGGATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000624527.3 ENST00000653895.1 ENST00000666762.1 ENST00000670876.1 |
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| CDS TCA 90 bp | TGCATGCACATCCATCCGGCTTCTCTCAAGAAGCAACCTGGTGTCTaGGAGCCGTTGAGTCTTCATCCCAGCTCTGGTATTTCTCTCATG | + |
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Preference number: 5 (lower is better) Translates to: CMHIHPASLKKQPGV*EPLSLHPSSGISLM Trigger: CATGAGAGAAATACCAGAGCTGGGATGAAGACTCAACGGCTCTCAGACACCAGGTTGCTTCTTGAGAGAAGCCGGATGGATGTGCATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000624527.3 ENST00000653895.1 ENST00000666762.1 ENST00000670876.1 |
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| CDS TCA 90 bp | TTCATCCTCTGTGCACTGTTTCACCCCGACATGTATGTTATTGTTTaGCTGTGGCATCAGCCATTCTTGGAGACTTTTCCCAGGGCTTGC | + |
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Preference number: 5 (lower is better) Translates to: FILCALFHPDMYVIV*LWHQPFLETFPRAC Trigger: GCAAGCCCTGGGAAAAGTCTCCAAGAATGGCTGATGCCACAGTCAAACAATAACATACATGTCGGGGTGAAACAGTGCACAGAGGATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653895.1 |
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| CDS GCA 72 bp | GAGCGGGCCTGGCTCCTGGCTGGCAGAGTGGCTCCATaGCATCAAATGCCCTTTCTCCCTCGGGAGACAGGG | + |
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Preference number: 6 (lower is better) Translates to: ERAWLLAGRVAP*HQMPFLPRETG Trigger: CCCTGTCTCCCGAGGGAGAAAGGGCATTTGATGGCATGGAGCCACTCTGCCAGCCAGGAGCCAGGCCCGCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS CCA 72 bp | TCAGACAGGGACGACATCTTCAGGGGGAGACAGCCGTaGGGCCATGGCTCCCCTGAGAGGTGTGTGGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: SDRDDIFRGRQP*GHGSPERCVGH Trigger: ATGACCCACACACCTCTCAGGGGAGCCATGGCCCCACGGCTGTCTCCCCCTGAAGATGTCGTCCCTGTCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS CCA 72 bp | TGCTGTAGCCCCCTTAGAGCGGGCCTGGCTCCTGGCTaGCAGAGTGGCTCCATGCCATCAAATGCCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: CCSPLRAGLAPG*QSGSMPSNALS Trigger: AGAAAGGGCATTTGATGGCATGGAGCCACTCTGCCAGCCAGGAGCCAGGCCCGCTCTAAGGGGGCTACAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS CCA 72 bp | TGCCATCTGAGGTTAGGATCGAGGGGCTGCCGGTGCTaGCAGGTGCTCGTTCTCTCCTGTAATGAGGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: CHLRLGSRGCRC*QVLVLSCNEEG Trigger: CCCCTCCTCATTACAGGAGAGAACGAGCACCTGCCAGCACCGGCAGCCCCTCGATCCTAACCTCAGATGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS CCA 72 bp | TTTGCCCCTTTCTCTAACCCAGGGTGCACGCTGCCGTaGCCCTTGGTGACAATGTCCCCTGTGGCCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: FAPFSNPGCTLP*PLVTMSPVAFL Trigger: GAGGAAGGCCACAGGGGACATTGTCACCAAGGGCCACGGCAGCGTGCACCCTGGGTTAGAGAAAGGGGCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653895.1 |
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| CDS TCA 72 bp | GGACCCGTGAAAGTGAAGGAGGAAATGCTCCAGGCCTaGCAGCAACCGCAGTGGGGAGATGGGGCAGGAACT | + |
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Preference number: 6 (lower is better) Translates to: GPVKVKEEMLQA*QQPQWGDGAGT Trigger: AGTTCCTGCCCCATCTCCCCACTGCGGTTGCTGTCAGGCCTGGAGCATTTCCTCCTTCACTTTCACGGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS TCA 72 bp | GCTAGTCCTGCCCCCAGGCTTAGCGGCGGCTCTTCCTaGAGTCCTGCTGACCGGAAGGAACGTCACAAACAT | + |
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Preference number: 6 (lower is better) Translates to: ASPAPRLSGGSS*SPADRKERHKH Trigger: ATGTTTGTGACGTTCCTTCCGGTCAGCAGGACTTCAGGAAGAGCCGCCGCTAAGCCTGGGGGCAGGACTAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666762.1 |
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| CDS GCA 72 bp | CCCAAAGGGTGCCATCTGAGGTTAGGATCGAGGGGCTaGCGGTGCTGGCAGGTGCTCGTTCTCTCCTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: PKGCHLRLGSRG*RCWQVLVLSCN Trigger: ATTACAGGAGAGAACGAGCACCTGCCAGCACCGGCAGCCCCTCGATCCTAACCTCAGATGGCACCCTTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS GCA 72 bp | CCGTCTAGAAACAGAGTCTGGCGGCTGCGCAGACCCTaGCAGAGCGTTGGGTGCTTTCTTTCTCGTTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: PSRNRVWRLRRP*QSVGCFLSRSH Trigger: GTGGGAACGAGAAAGAAAGCACCCAACGCTCTGGCAGGGTCTGCGCAGCCGCCAGACTCTGTTTCTAGACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS CCA 72 bp | GACAGCCGTGGGGCCATGGCTCCCCTGAGAGGTGTGTaGGTCATCAGGCCGCACATTTCAAATGAGTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: DSRGAMAPLRGV*VIRPHISNECE Trigger: CTCACACTCATTTGAAATGTGCGGCCTGATGACCCACACACCTCTCAGGGGAGCCATGGCCCCACGGCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS CAA 72 bp | CTCAGAGGCAACTTCCGGGAGAAAGCTGGACCTGCTTaGAGGCTCACCTCCCTGCATGCACATCCATCCGGC | + |
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Preference number: 6 (lower is better) Translates to: LRGNFREKAGPA*RLTSLHAHPSG Trigger: GCCGGATGGATGTGCATGCAGGGAGGTGAGCCTCAAAGCAGGTCCAGCTTTCTCCCGGAAGTTGCCTCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670876.1 |
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| CDS GCA 72 bp | GTTCCTCAGAGGCAACTTCCGGGAGAAAGCTGGACCTaGTTTGAGGCTCACCTCCCTGCATGCACATCCATC | + |
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Preference number: 6 (lower is better) Translates to: VPQRQLPGESWT*FEAHLPACTSI Trigger: GATGGATGTGCATGCAGGGAGGTGAGCCTCAAAGCAGGTCCAGCTTTCTCCCGGAAGTTGCCTCTGAGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670876.1 |
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| CDS CAA 72 bp | GGGCTTCTCAGATGGCAGGGAGTGGCCTGGTCACTGTaGATCTTGAAGGGTGTGGGACCCGTGAAAGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: GLLRWQGVAWSL*ILKGVGPVKVK Trigger: CTTCACTTTCACGGGTCCCACACCCTTCAAGATCAACAGTGACCAGGCCACTCCCTGCCATCTGAGAAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS CAA 72 bp | GCAGGGTTCCCTCTTGGTGTTGTCCGTTCGGTGGGTTaGGACAAATGCATAATGCCATGTACCCACCCATCG | + |
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Preference number: 6 (lower is better) Translates to: AGFPLGVVRSVG*DKCIMPCTHPS Trigger: CGATGGGTGGGTACATGGCATTATGCATTTGTCCAAACCCACCGAACGGACAACACCAAGAGGGAACCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS CAA 90 bp | ATGGTTTCTGGGCTTCTCAGATGGCAGGGAGTGGCCTGGTCACTGTaGATCTTGAAGGGTGTGGGACCCGTGAAAGTGAAGGAGGAAATG | + |
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Preference number: 6 (lower is better) Translates to: MVSGLLRWQGVAWSL*ILKGVGPVKVKEEM Trigger: CATTTCCTCCTTCACTTTCACGGGTCCCACACCCTTCAAGATCAACAGTGACCAGGCCACTCCCTGCCATCTGAGAAGCCCAGAAACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS CCA 72 bp | TTCATTGCTAATCTCCCTCTGACGGAAGATGGTTTCTaGGCTTCTCAGATGGCAGGGAGTGGCCTGGTCACT | + |
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Preference number: 6 (lower is better) Translates to: FIANLPLTEDGF*ASQMAGSGLVT Trigger: AGTGACCAGGCCACTCCCTGCCATCTGAGAAGCCCAGAAACCATCTTCCGTCAGAGGGAGATTAGCAATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS CCA 72 bp | CGCACAGAGGCCACAGTTTATAGCAGGGTTCCCTCTTaGTGTTGTCCGTTCGGTGGGTTTGGACAAATGCAT | + |
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Preference number: 6 (lower is better) Translates to: RTEATVYSRVPS*CCPFGGFGQMH Trigger: ATGCATTTGTCCAAACCCACCGAACGGACAACACCAAGAGGGAACCCTGCTATAAACTGTGGCCTCTGTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS TCA 72 bp | ATCCATCCGGCTTCTCTCAAGAAGCAACCTGGTGTCTaGGAGCCGTTGAGTCTTCATCCCAGCTCTGGTATT | + |
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Preference number: 6 (lower is better) Translates to: IHPASLKKQPGV*EPLSLHPSSGI Trigger: AATACCAGAGCTGGGATGAAGACTCAACGGCTCTCAGACACCAGGTTGCTTCTTGAGAGAAGCCGGATGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000624527.3 ENST00000653895.1 ENST00000666762.1 ENST00000670876.1 |
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| CDS TCA 72 bp | TCAGGAGATCTTCTAAGTGAATTACTAAGTCGGCCGTaGCCGTCTAGAAACAGAGTCTGGCGGCTGCGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SGDLLSELLSRP*PSRNRVWRLRR Trigger: TCTGCGCAGCCGCCAGACTCTGTTTCTAGACGGTCACGGCCGACTTAGTAATTCACTTAGAAGATCTCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS TCA 72 bp | GAGAGACGTCAGAAAGCTTCATTGCTAATCTCCCTCTaGCGGAAGATGGTTTCTGGGCTTCTCAGATGGCAG | + |
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Preference number: 6 (lower is better) Translates to: ERRQKASLLISL*RKMVSGLLRWQ Trigger: CTGCCATCTGAGAAGCCCAGAAACCATCTTCCGTCAGAGGGAGATTAGCAATGAAGCTTTCTGACGTCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS GCA 72 bp | CCTCTTGGTGTTGTCCGTTCGGTGGGTTTGGACAAATaGATAATGCCATGTACCCACCCATCGTACTATCAC | + |
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Preference number: 6 (lower is better) Translates to: PLGVVRSVGLDK*IMPCTHPSYYH Trigger: GTGATAGTACGATGGGTGGGTACATGGCATTATGCATTTGTCCAAACCCACCGAACGGACAACACCAAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS CCA 72 bp | CCCCTGCTTCCAGGGAATGTTCCTGAAGAGGTCAAGTaGATAGATCATCAGGGACCACAGGAAAGACCAATA | + |
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Preference number: 6 (lower is better) Translates to: PLLPGNVPEEVK*IDHQGPQERPI Trigger: TATTGGTCTTTCCTGTGGTCCCTGATGATCTATCCACTTGACCTCTTCAGGAACATTCCCTGGAAGCAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS CAA 72 bp | TTCTTCATCTGTACAGTGGTGAAGATGATCCCCACTTaGCTAGGTTGTTGTGAGCATTACGGTGAGCACCGG | + |
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Preference number: 6 (lower is better) Translates to: FFICTVVKMIPT*LGCCEHYGEHR Trigger: CCGGTGCTCACCGTAATGCTCACAACAACCTAGCAAAGTGGGGATCATCTTCACCACTGTACAGATGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS CAA 72 bp | GCCCACAGCCATCCTGTCTCAGCAGGGTCCTTTTCATaGAGGGAAGCATTTTTCATATCCATAATTTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: AHSHPVSAGSFS*REAFFISIICP Trigger: GGGGCAAATTATGGATATGAAAAATGCTTCCCTCAATGAAAAGGACCCTGCTGAGACAGGATGGCTGTGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653895.1 |
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| CDS CAA 90 bp | ACCTTCAATTTCTTCATCTGTACAGTGGTGAAGATGATCCCCACTTaGCTAGGTTGTTGTGAGCATTACGGTGAGCACCGGAGGCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: TFNFFICTVVKMIPT*LGCCEHYGEHRRLE Trigger: TTCCAGCCTCCGGTGCTCACCGTAATGCTCACAACAACCTAGCAAAGTGGGGATCATCTTCACCACTGTACAGATGAAGAAATTGAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS CAA 90 bp | ATCCCCAACCTGTGGGGTTCATTTGTCACAGCTGATGAACCCATATaGACACATCATGATCGCACAGAGGCCACAGTTTATAGCAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: IPNLWGSFVTADEPI*THHDRTEATVYSRV Trigger: AACCCTGCTATAAACTGTGGCCTCTGTGCGATCATGATGTGTCAATATGGGTTCATCAGCTGTGACAAATGAACCCCACAGGTTGGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS CAA 90 bp | TTTCATCCTCTGTGCACTGTTTCACCCCGACATGTATGTTATTGTTaGACTGTGGCATCAGCCATTCTTGGAGACTTTTCCCAGGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: FHPLCTVSPRHVCYC*TVASAILGDFSQGL Trigger: CAAGCCCTGGGAAAAGTCTCCAAGAATGGCTGATGCCACAGTCAAACAATAACATACATGTCGGGGTGAAACAGTGCACAGAGGATGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653895.1 |
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| CDS TCA 72 bp | TGTGCACTGTTTCACCCCGACATGTATGTTATTGTTTaGCTGTGGCATCAGCCATTCTTGGAGACTTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: CALFHPDMYVIV*LWHQPFLETFP Trigger: GGGAAAAGTCTCCAAGAATGGCTGATGCCACAGTCAAACAATAACATACATGTCGGGGTGAAACAGTGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653895.1 |
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| CDS CAA 72 bp | CTGTGGGGTTCATTTGTCACAGCTGATGAACCCATATaGACACATCATGATCGCACAGAGGCCACAGTTTAT | + |
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Preference number: 6 (lower is better) Translates to: LWGSFVTADEPI*THHDRTEATVY Trigger: ATAAACTGTGGCCTCTGTGCGATCATGATGTGTCAATATGGGTTCATCAGCTGTGACAAATGAACCCCACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS CAA 72 bp | TCCTCTGTGCACTGTTTCACCCCGACATGTATGTTATaGTTTGACTGTGGCATCAGCCATTCTTGGAGACTT | + |
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Preference number: 6 (lower is better) Translates to: SSVHCFTPTCML*FDCGISHSWRL Trigger: AAGTCTCCAAGAATGGCTGATGCCACAGTCAAACAATAACATACATGTCGGGGTGAAACAGTGCACAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653895.1 |
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| CDS GCA 72 bp | GATAGATCATCAGGGACCACAGGAAAGACCAATACCTaGTACTTTCTTATGTTGATTCTTCTATGTCCATTA | + |
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Preference number: 6 (lower is better) Translates to: DRSSGTTGKTNT*YFLMLILLCPL Trigger: TAATGGACATAGAAGAATCAACATAAGAAAGTAGCAGGTATTGGTCTTTCCTGTGGTCCCTGATGATCTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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| CDS CAA 72 bp | TATAGCTGGAATCGTACGGTGTGTAGACTTTCCAGATaGGTTTCTTTCACTTACTCATATGCATTTACATTT | + |
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Preference number: 6 (lower is better) Translates to: YSWNRTVCRLSR*VSFTYSYAFTF Trigger: AAATGTAAATGCATATGAGTAAGTGAAAGAAACCAATCTGGAAAGTCTACACACCGTACGATTCCAGCTATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624527.3 ENST00000666762.1 ENST00000670876.1 |
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