Pregenerated sensors for LINC01593 (Homo sapiens)

Ensembl gene IDs: ENSG00000231221

Ensembl transcript IDs: ENST00000424355.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TCGGTGCTTCACACACTGTTTGCTGGCCTTCTCAGTAGGTACGGATaGCAGCCTCCCTCAGGATGGCTTGCCATTTGCATTAAGTATTTA	+
Preference number: 5 (lower is better) Translates to: SVLHTLFAGLLSRYG*QPPSGWLAICIKYL Trigger: TAAATACTTAATGCAAATGGCAAGCCATCCTGAGGGAGGCTGGCATCCGTACCTACTGAGAAGGCCAGCAAACAGTGTGTGAAGCACCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424355.1
CDS GCA 90 bp	CTCAGTAGGTACGGATGCCAGCCTCCCTCAGGATGGCTTGCCATTTaGATTAAGTATTTATCACAGAGAGAAATAGTCATGGCCTGGCAC	+
Preference number: 5 (lower is better) Translates to: LSRYGCQPPSGWLAI*IKYLSQREIVMAWH Trigger: GTGCCAGGCCATGACTATTTCTCTCTGTGATAAATACTTAATGCAAATGGCAAGCCATCCTGAGGGAGGCTGGCATCCGTACCTACTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424355.1
CDS CCA 90 bp	TTTGCTGGCCTTCTCAGTAGGTACGGATGCCAGCCTCCCTCAGGATaGCTTGCCATTTGCATTAAGTATTTATCACAGAGAGAAATAGTC	+
Preference number: 5 (lower is better) Translates to: FAGLLSRYGCQPPSG*LAICIKYLSQREIV Trigger: GACTATTTCTCTCTGTGATAAATACTTAATGCAAATGGCAAGCCATCCTGAGGGAGGCTGGCATCCGTACCTACTGAGAAGGCCAGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424355.1
CDS CCA 90 bp	TTTATCACAGAGAGAAATAGTCATGGCCTGGCACAACACAAACGATaGATTTGGAGAAATCCAAGCAAGTCCCTTCAAGTAAGATGGAGA	+
Preference number: 5 (lower is better) Translates to: FITERNSHGLAQHKR*IWRNPSKSLQVRWR Trigger: TCTCCATCTTACTTGAAGGGACTTGCTTGGATTTCTCCAAATCCATCGTTTGTGTTGTGCCAGGCCATGACTATTTCTCTCTGTGATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424355.1
CDS GCA 72 bp	CACACACTGTTTGCTGGCCTTCTCAGTAGGTACGGATaGCAGCCTCCCTCAGGATGGCTTGCCATTTGCATT	+
Preference number: 6 (lower is better) Translates to: HTLFAGLLSRYG*QPPSGWLAICI Trigger: AATGCAAATGGCAAGCCATCCTGAGGGAGGCTGGCATCCGTACCTACTGAGAAGGCCAGCAAACAGTGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424355.1
CDS CCA 72 bp	CTTCTCAGTAGGTACGGATGCCAGCCTCCCTCAGGATaGCTTGCCATTTGCATTAAGTATTTATCACAGAGA	+
Preference number: 6 (lower is better) Translates to: LLSRYGCQPPSG*LAICIKYLSQR Trigger: TCTCTGTGATAAATACTTAATGCAAATGGCAAGCCATCCTGAGGGAGGCTGGCATCCGTACCTACTGAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424355.1

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