Pregenerated sensors for LINC01592 (Homo sapiens)
Ensembl gene IDs: ENSG00000253658Ensembl transcript IDs: ENST00000517925.2, ENST00000518540.5, ENST00000519062.6, ENST00000524286.2, ENST00000657605.1, ENST00000657671.1, ENST00000662535.1, ENST00000662861.1, ENST00000663873.1, ENST00000663915.1, ENST00000663971.1, ENST00000664220.1, ENST00000665853.1, ENST00000669481.1, ENST00000670857.1
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCTCCATGCCAGGCACAGGGCACACGATGGATAAAACAGACGTCGTaGTGTCTCACATGTTGCTTGCAGTGCCCAGCACTTTCTCAAAAG | + |
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Preference number: 5 (lower is better) Translates to: APCQAQGTRWIKQTS*CLTCCLQCPALSQK Trigger: CTTTTGAGAAAGTGCTGGGCACTGCAAGCAACATGTGAGACACCACGACGTCTGTTTTATCCATCGTGTGCCCTGTGCCTGGCATGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657605.1 ENST00000662535.1 ENST00000665853.1 |
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| CDS CCA 90 bp | TTGGTAAATGTGGGACAGGCTCCATGCCAGGCACAGGGCACACGATaGATAAAACAGACGTCGTGGTGTCTCACATGTTGCTTGCAGTGC | + |
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Preference number: 5 (lower is better) Translates to: LVNVGQAPCQAQGTR*IKQTSWCLTCCLQC Trigger: GCACTGCAAGCAACATGTGAGACACCACGACGTCTGTTTTATCCATCGTGTGCCCTGTGCCTGGCATGGAGCCTGTCCCACATTTACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657605.1 |
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| CDS TCA 90 bp | TGTCTTAGGTTGTCCAGTACACGTGAGGGTCCGCGGCTTCATTCTTaGAGTCAGCGAGACCAAGAACCTACCAATTCCGGACACAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: CLRLSSTREGPRLHS*SQRDQEPTNSGHKF Trigger: GAACTTGTGTCCGGAATTGGTAGGTTCTTGGTCTCGCTGACTTCAAGAATGAAGCCGCGGACCCTCACGTGTACTGGACAACCTAAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663971.1 |
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| CDS TCA 90 bp | GGGGAATTGTTTCCAGGAATCCCTGTGCCTAGATCAGGAACCTTATaGTGGCAGGAGTCCATCTTCATCTTGTTAGCCCCAACACGTCAC | + |
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Preference number: 5 (lower is better) Translates to: GELFPGIPVPRSGTL*WQESIFILLAPTRH Trigger: GTGACGTGTTGGGGCTAACAAGATGAAGATGGACTCCTGCCATCATAAGGTTCCTGATCTAGGCACAGGGATTCCTGGAAACAATTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657605.1 ENST00000662535.1 ENST00000665853.1 |
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| CDS TCA 90 bp | GTTGGGGTTGAGTATGGTGGGCTGAGTGTCCTGACTGCCCACACTTaGACCACTTCAGTAATTTCTGCAGAACTCAAATGCTTCTACTGC | + |
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Preference number: 5 (lower is better) Translates to: VGVEYGGLSVLTAHT*TTSVISAELKCFYC Trigger: GCAGTAGAAGCATTTGAGTTCTGCAGAAATTACTGAAGTGGTTCAAGTGTGGGCAGTCAGGACACTCAGCCCACCATACTCAACCCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000517925.2 ENST00000518540.5 ENST00000519062.6 ENST00000524286.2 ENST00000662861.1 ENST00000663873.1 ENST00000663915.1 ENST00000669481.1 ENST00000670857.1 |
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| CDS GCA 90 bp | GAAAAGACGTGTGGCACCGCTTCTCAGAAAGCCTTCTTCTATAACTaGTTTCAGGCTAGACGGAGTGCCAACATCCAACTATGTCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: EKTCGTASQKAFFYN*FQARRSANIQLCLA Trigger: GGCAAGACATAGTTGGATGTTGGCACTCCGTCTAGCCTGAAAGCAGTTATAGAAGAAGGCTTTCTGAGAAGCGGTGCCACACGTCTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657605.1 ENST00000662535.1 ENST00000665853.1 |
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| CDS GCA 90 bp | TACATCGCTGGTGGAGACCCTGAGTATCAGCGCCACAAATTTCATTaGCATTCACGTGGTAATCTTGTGCACTGGGGATCATCAATACAG | + |
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Preference number: 5 (lower is better) Translates to: YIAGGDPEYQRHKFH*HSRGNLVHWGSSIQ Trigger: CTGTATTGATGATCCCCAGTGCACAAGATTACCACGTGAATGGCAATGAAATTTGTGGCGCTGATACTCAGGGTCTCCACCAGCGATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664220.1 |
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| CDS GCA 90 bp | AAGTTTTTCATTTCTGTGAAGTTGGTAAATGTGGGACAGGCTCCATaGCAGGCACAGGGCACACGATGGATAAAACAGACGTCGTGGTGT | + |
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Preference number: 5 (lower is better) Translates to: KFFISVKLVNVGQAP*QAQGTRWIKQTSWC Trigger: ACACCACGACGTCTGTTTTATCCATCGTGTGCCCTGTGCCTGGCATGGAGCCTGTCCCACATTTACCAACTTCACAGAAATGAAAAACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657605.1 |
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| CDS TCA 90 bp | TTGCTAAGTCACTTAATAGGCATTACCTCTGTGAGAAGAATTAAGTaGCAGAATGATGCTGCCACAAGCCCAGGCTGGTTCAAGCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: LLSHLIGITSVRRIK*QNDAATSPGWFKQA Trigger: TGCCTGCTTGAACCAGCCTGGGCTTGTGGCAGCATCATTCTGTCACTTAATTCTTCTCACAGAGGTAATGCCTATTAAGTGACTTAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664220.1 |
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| CDS GCA 90 bp | AGAATGATCACATGGCCACTTCTACCTGCAAAGGAGGTTAGGAAATaGAATTTGCAGCTGGCTACGTACAGCCTCACTGAAAATCAGGTT | + |
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Preference number: 5 (lower is better) Translates to: RMITWPLLPAKEVRK*NLQLATYSLTENQV Trigger: AACCTGATTTTCAGTGAGGCTGTACGTAGCCAGCTGCAAATTGCATTTCCTAACCTCCTTTGCAGGTAGAAGTGGCCATGTGATCATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517925.2 |
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| CDS GCA 90 bp | AGTATCAGCGCCACAAATTTCATTGCCATTCACGTGGTAATCTTGTaGACTGGGGATCATCAATACAGGTACAATGATGTGGAAGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SISATNFIAIHVVIL*TGDHQYRYNDVEAW Trigger: CCAGGCTTCCACATCATTGTACCTGTATTGATGATCCCCAGTGCACAAGATTACCACGTGAATGGCAATGAAATTTGTGGCGCTGATACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664220.1 |
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| CDS TCA 90 bp | TTCAAGCAGGCAAGGTTCTTCACATTTTCAATTTGCAGCCTTAGTTaGAGGAAGCACTGGGATAGAGTTTCAAGCACCAGCACACCGAAA | + |
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Preference number: 5 (lower is better) Translates to: FKQARFFTFSICSLS*RKHWDRVSSTSTPK Trigger: TTTCGGTGTGCTGGTGCTTGAAACTCTATCCCAGTGCTTCCTTCAACTAAGGCTGCAAATTGAAAATGTGAAGAACCTTGCCTGCTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518540.5 ENST00000664220.1 |
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| CDS GCA 90 bp | TCACATGGCCACTTCTACCTGCAAAGGAGGTTAGGAAATGCAATTTaGAGCTGGCTACGTACAGCCTCACTGAAAATCAGGTTATATTAC | + |
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Preference number: 5 (lower is better) Translates to: SHGHFYLQRRLGNAI*SWLRTASLKIRLYY Trigger: GTAATATAACCTGATTTTCAGTGAGGCTGTACGTAGCCAGCTGCAAATTGCATTTCCTAACCTCCTTTGCAGGTAGAAGTGGCCATGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517925.2 |
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| CDS GCA 90 bp | CAGCAAGGAATCACTGTTACCAATATCCATCTCGTGACTACATCATaGACGCCCTTGCTAAGTCACTTAATAGGCATTACCTCTGTGAGA | + |
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Preference number: 5 (lower is better) Translates to: QQGITVTNIHLVTTS*TPLLSHLIGITSVR Trigger: TCTCACAGAGGTAATGCCTATTAAGTGACTTAGCAAGGGCGTGCATGATGTAGTCACGAGATGGATATTGGTAACAGTGATTCCTTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664220.1 |
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| CDS CCA 90 bp | TCTTTATTTCCCTGTCTTAGGTTGTCCAGTACAAGTTCTGGAGGCTaGATGTCCAAGATCATAGTGTCAATAGGGTTGGGTTCTTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: SLFPCLRLSSTSSGG*MSKIIVSIGLGSSE Trigger: CTCAGAAGAACCCAACCCTATTGACACTATGATCTTGGACATCCAGCCTCCAGAACTTGTACTGGACAACCTAAGACAGGGAAATAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519062.6 |
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| CDS CCA 90 bp | ATGAGTAAATATGGTTTCTTCTCTGCTCCTAGGAGTTCTGGAGGCTaGATGTCCAAGATCATAGTGTCAATAGGGTTGGGTTCTTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: MSKYGFFSAPRSSGG*MSKIIVSIGLGSSE Trigger: CTCAGAAGAACCCAACCCTATTGACACTATGATCTTGGACATCCAGCCTCCAGAACTCCTAGGAGCAGAGAAGAAACCATATTTACTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000524286.2 ENST00000662535.1 ENST00000663873.1 ENST00000663915.1 |
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| CDS CCA 90 bp | GACAGCATCAATATTAGGCATACAGATGGTTTGTTAACGGAGTTCTaGAGGCTGGATGTCCAAGATCATAGTGTCAATAGGGTTGGGTTC | + |
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Preference number: 5 (lower is better) Translates to: DSINIRHTDGLLTEF*RLDVQDHSVNRVGF Trigger: GAACCCAACCCTATTGACACTATGATCTTGGACATCCAGCCTCCAGAACTCCGTTAACAAACCATCTGTATGCCTAATATTGATGCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000657605.1 ENST00000657671.1 ENST00000662861.1 ENST00000665853.1 ENST00000669481.1 |
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| CDS CCA 90 bp | CCAAAATCAAGAGGTCCCTCTGATTTTCAAGGCTGGCTCTCAATGTaGCTGTGGGTTGCTCCCTACTCATTGCTCAGATTGAAATATAAA | + |
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Preference number: 5 (lower is better) Translates to: PKSRGPSDFQGWLSM*LWVAPYSLLRLKYK Trigger: TTTATATTTCAATCTGAGCAATGAGTAGGGAGCAACCCACAGCCACATTGAGAGCCAGCCTTGAAAATCAGAGGGACCTCTTGATTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657605.1 ENST00000662535.1 ENST00000665853.1 |
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| CDS CCA 90 bp | TTAAGGAGATGTGAAGCTGCATTATTTTGGCTCAGTTCTGGAGGCTaGATGTCCAAGATCATAGTGTCAATAGGGTTGGGTTCTTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: LRRCEAALFWLSSGG*MSKIIVSIGLGSSE Trigger: CTCAGAAGAACCCAACCCTATTGACACTATGATCTTGGACATCCAGCCTCCAGAACTGAGCCAAAATAATGCAGCTTCACATCTCCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670857.1 |
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| CDS CCA 90 bp | AGTGTAGTCTTCTGTCCATTAAGGAGATGTGAAGCTGCATTATTTTaGCTCAGTTCTGGAGGCTGGATGTCCAAGATCATAGTGTCAATA | + |
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Preference number: 5 (lower is better) Translates to: SVVFCPLRRCEAALF*LSSGGWMSKIIVSI Trigger: TATTGACACTATGATCTTGGACATCCAGCCTCCAGAACTGAGCCAAAATAATGCAGCTTCACATCTCCTTAATGGACAGAAGACTACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670857.1 |
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| CDS TCA 90 bp | AGAAATATATCTTGGAGTATTCTTCTAGACAGAACGTCAGTGATCTaGGATCTTCTGAAGCTCAGTCCAGGACTATTCTCCTGGCAAGAA | + |
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Preference number: 5 (lower is better) Translates to: RNISWSILLDRTSVI*DLLKLSPGLFSWQE Trigger: TTCTTGCCAGGAGAATAGTCCTGGACTGAGCTTCAGAAGATCTCAGATCACTGACGTTCTGTCTAGAAGAATACTCCAAGATATATTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664220.1 |
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| CDS TCA 90 bp | ACGGAGTGCCAACATCCAACTATGTCTTGCCTAATTCTTACTCTTTaGGATGTACTTTCTGGCCGAATACAATCATCCCTTGATATCTGT | + |
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Preference number: 5 (lower is better) Translates to: TECQHPTMSCLILTL*DVLSGRIQSSLDIC Trigger: ACAGATATCAAGGGATGATTGTATTCGGCCAGAAAGTACATCTCAAAGAGTAAGAATTAGGCAAGACATAGTTGGATGTTGGCACTCCGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657605.1 ENST00000662535.1 ENST00000665853.1 |
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| CDS GCA 90 bp | AATGATGTGGAAGCCTGGGCAAATTATTTAGCAGGTGAGATTTTGTaGGGTCGATCAATGAGTGACAAGAAACCTAGACTTAATAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: NDVEAWANYLAGEIL*GRSMSDKKPRLNRK Trigger: CTTTCTATTAAGTCTAGGTTTCTTGTCACTCATTGATCGACCGCACAAAATCTCACCTGCTAAATAATTTGCCCAGGCTTCCACATCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664220.1 |
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| CDS TCA 90 bp | TTCTCTGAGAGTTCTATTTGGGGCTCAGGAAGTGTAGGTGACCATTaGTGTGGTAGTGATAACAAATGCACAAAACAATCTGCTTTATTT | + |
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Preference number: 5 (lower is better) Translates to: FSESSIWGSGSVGDH*CGSDNKCTKQSALF Trigger: AAATAAAGCAGATTGTTTTGTGCATTTGTTATCACTACCACATCAATGGTCACCTACACTTCCTGAGCCCCAAATAGAACTCTCAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000518540.5 ENST00000519062.6 ENST00000669481.1 ENST00000670857.1 |
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| CDS TCA 90 bp | ATTTTGAGCAATATATTTAAGACTTCATTGTTTCTGACATGTCACTaGGTCAGTGGCAAGAGTGACAATACCTGTCTCAGTCTCATGCAC | + |
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Preference number: 5 (lower is better) Translates to: ILSNIFKTSLFLTCH*VSGKSDNTCLSLMH Trigger: GTGCATGAGACTGAGACAGGTATTGTCACTCTTGCCACTGACTCAGTGACATGTCAGAAACAATGAAGTCTTAAATATATTGCTCAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518540.5 |
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| CDS TCA 90 bp | TTCAGGCTACTGGCCTTAGGTAAATCAAAATTTAGCAAAGAGACTTaGAGTCTTTCTGGATATGAAACAAATGACCCTAAAAATTCACAC | + |
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Preference number: 5 (lower is better) Translates to: FRLLALGKSKFSKET*SLSGYETNDPKNSH Trigger: GTGTGAATTTTTAGGGTCATTTGTTTCATATCCAGAAAGACTTCAAGTCTCTTTGCTAAATTTTGATTTACCTAAGGCCAGTAGCCTGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000518540.5 ENST00000669481.1 ENST00000670857.1 |
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| CDS CCA 90 bp | GGTGTTATCCCTATACTTCTGCTATGCTCTGAAAGAAGAAATACATaGAACATAAATATCCAATTACAGAATCTACAGGGCAAATCTACT | + |
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Preference number: 5 (lower is better) Translates to: GVIPILLLCSERRNT*NINIQLQNLQGKST Trigger: AGTAGATTTGCCCTGTAGATTCTGTAATTGGATATTTATGTTCCATGTATTTCTTCTTTCAGAGCATAGCAGAAGTATAGGGATAACACC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000518540.5 ENST00000669481.1 ENST00000670857.1 |
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| CDS CCA 72 bp | GTGGGACAGGCTCCATGCCAGGCACAGGGCACACGATaGATAAAACAGACGTCGTGGTGTCTCACATGTTGC | + |
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Preference number: 6 (lower is better) Translates to: VGQAPCQAQGTR*IKQTSWCLTCC Trigger: GCAACATGTGAGACACCACGACGTCTGTTTTATCCATCGTGTGCCCTGTGCCTGGCATGGAGCCTGTCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657605.1 ENST00000662535.1 ENST00000665853.1 |
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| CDS CCA 72 bp | CAGGCACAGGGCACACGATGGATAAAACAGACGTCGTaGTGTCTCACATGTTGCTTGCAGTGCCCAGCACTT | + |
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Preference number: 6 (lower is better) Translates to: QAQGTRWIKQTS*CLTCCLQCPAL Trigger: AAGTGCTGGGCACTGCAAGCAACATGTGAGACACCACGACGTCTGTTTTATCCATCGTGTGCCCTGTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657605.1 ENST00000662535.1 ENST00000665853.1 |
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| CDS GCA 72 bp | ATCATTTCTTGCCTGCTTACTGTGGGACAGGCTCCATaGCAGGCACAGGGCACACGATGGATAAAACAGACG | + |
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Preference number: 6 (lower is better) Translates to: IISCLLTVGQAP*QAQGTRWIKQT Trigger: CGTCTGTTTTATCCATCGTGTGCCCTGTGCCTGGCATGGAGCCTGTCCCACAGTAAGCAGGCAAGAAATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000662535.1 ENST00000665853.1 |
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| CDS CCA 72 bp | AGAGGTCCCTCTGATTTTCAAGGCTGGCTCTCAATGTaGCTGTGGGTTGCTCCCTACTCATTGCTCAGATTG | + |
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Preference number: 6 (lower is better) Translates to: RGPSDFQGWLSM*LWVAPYSLLRL Trigger: CAATCTGAGCAATGAGTAGGGAGCAACCCACAGCCACATTGAGAGCCAGCCTTGAAAATCAGAGGGACCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657605.1 ENST00000662535.1 ENST00000665853.1 |
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| CDS CAA 72 bp | ATAGGGTTGGGTTCTTCTGAGGCCTGTCTTTTGCGCTaGCAGATGACCACTTTCTTGCTGTGTCCTCACGTG | + |
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Preference number: 6 (lower is better) Translates to: IGLGSSEACLLR*QMTTFLLCPHV Trigger: CACGTGAGGACACAGCAAGAAAGTGGTCATCTGCAAGCGCAAAAGACAGGCCTCAGAAGAACCCAACCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000519062.6 ENST00000524286.2 ENST00000657605.1 ENST00000657671.1 ENST00000662861.1 ENST00000663873.1 ENST00000663915.1 ENST00000663971.1 ENST00000665853.1 ENST00000669481.1 ENST00000670857.1 |
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| CDS CAA 72 bp | GGAGGCTGGATGTCCAAGATCATAGTGTCAATAGGGTaGGGTTCTTCTGAGGCCTGTCTTTTGCGCTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: GGWMSKIIVSIG*GSSEACLLRLQ Trigger: CTGCAAGCGCAAAAGACAGGCCTCAGAAGAACCCAACCCTATTGACACTATGATCTTGGACATCCAGCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000519062.6 ENST00000524286.2 ENST00000657605.1 ENST00000657671.1 ENST00000662535.1 ENST00000662861.1 ENST00000663873.1 ENST00000663915.1 ENST00000663971.1 ENST00000665853.1 ENST00000669481.1 ENST00000670857.1 |
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| CDS CAA 72 bp | CCCCTGAGAGTTAGACCAGGCACTCTTGTGATGACATaGAAAAGACGTGTGGCACCGCTTCTCAGAAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: PLRVRPGTLVMT*KRRVAPLLRKP Trigger: AGGCTTTCTGAGAAGCGGTGCCACACGTCTTTTCAATGTCATCACAAGAGTGCCTGGTCTAACTCTCAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657605.1 ENST00000662535.1 ENST00000665853.1 |
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| CDS GCA 72 bp | GGTGGAGACCCTGAGTATCAGCGCCACAAATTTCATTaGCATTCACGTGGTAATCTTGTGCACTGGGGATCA | + |
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Preference number: 6 (lower is better) Translates to: GGDPEYQRHKFH*HSRGNLVHWGS Trigger: TGATCCCCAGTGCACAAGATTACCACGTGAATGGCAATGAAATTTGTGGCGCTGATACTCAGGGTCTCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664220.1 |
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| CDS GCA 72 bp | ATTTCTGTGAAGTTGGTAAATGTGGGACAGGCTCCATaGCAGGCACAGGGCACACGATGGATAAAACAGACG | + |
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Preference number: 6 (lower is better) Translates to: ISVKLVNVGQAP*QAQGTRWIKQT Trigger: CGTCTGTTTTATCCATCGTGTGCCCTGTGCCTGGCATGGAGCCTGTCCCACATTTACCAACTTCACAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657605.1 |
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| CDS CAA 72 bp | GTGTCAATAGGGTTGGGTTCTTCTGAGGCCTGTCTTTaGCGCTTGCAGATGACCACTTTCTTGCTGTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: VSIGLGSSEACL*RLQMTTFLLCP Trigger: AGGACACAGCAAGAAAGTGGTCATCTGCAAGCGCAAAAGACAGGCCTCAGAAGAACCCAACCCTATTGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000519062.6 ENST00000524286.2 ENST00000657605.1 ENST00000657671.1 ENST00000662861.1 ENST00000663873.1 ENST00000663915.1 ENST00000663971.1 ENST00000665853.1 ENST00000669481.1 ENST00000670857.1 |
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| CDS TCA 72 bp | GAGTATGGTGGGCTGAGTGTCCTGACTGCCCACACTTaGACCACTTCAGTAATTTCTGCAGAACTCAAATGC | + |
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Preference number: 6 (lower is better) Translates to: EYGGLSVLTAHT*TTSVISAELKC Trigger: GCATTTGAGTTCTGCAGAAATTACTGAAGTGGTTCAAGTGTGGGCAGTCAGGACACTCAGCCCACCATACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000517925.2 ENST00000518540.5 ENST00000519062.6 ENST00000524286.2 ENST00000657671.1 ENST00000662861.1 ENST00000663873.1 ENST00000663915.1 ENST00000663971.1 ENST00000669481.1 ENST00000670857.1 |
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| CDS GCA 72 bp | AAACAGACGTCGTGGTGTCTCACATGTTGCTTGCAGTaGCCAGCACTTTCTCAAAAGGATCCTGAAAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: KQTSWCLTCCLQ*PALSQKDPEKS Trigger: CGACTTTTCAGGATCCTTTTGAGAAAGTGCTGGGCACTGCAAGCAACATGTGAGACACCACGACGTCTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657605.1 ENST00000662535.1 ENST00000665853.1 |
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| CDS GCA 72 bp | CGATGGATAAAACAGACGTCGTGGTGTCTCACATGTTaGTTGCAGTGCCCAGCACTTTCTCAAAAGGATCCT | + |
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Preference number: 6 (lower is better) Translates to: RWIKQTSWCLTC*LQCPALSQKDP Trigger: AGGATCCTTTTGAGAAAGTGCTGGGCACTGCAAGCAACATGTGAGACACCACGACGTCTGTTTTATCCATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657605.1 ENST00000662535.1 ENST00000665853.1 |
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| CDS GCA 72 bp | TGTGGCACCGCTTCTCAGAAAGCCTTCTTCTATAACTaGTTTCAGGCTAGACGGAGTGCCAACATCCAACTA | + |
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Preference number: 6 (lower is better) Translates to: CGTASQKAFFYN*FQARRSANIQL Trigger: TAGTTGGATGTTGGCACTCCGTCTAGCCTGAAAGCAGTTATAGAAGAAGGCTTTCTGAGAAGCGGTGCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657605.1 ENST00000662535.1 ENST00000665853.1 |
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| CDS CCA 72 bp | CCCTGTCTTAGGTTGTCCAGTACAAGTTCTGGAGGCTaGATGTCCAAGATCATAGTGTCAATAGGGTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: PCLRLSSTSSGG*MSKIIVSIGLG Trigger: ACCCAACCCTATTGACACTATGATCTTGGACATCCAGCCTCCAGAACTTGTACTGGACAACCTAAGACAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519062.6 |
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| CDS CCA 72 bp | CGAGACCAAGAACCTACCAATTCCGGACACAAGTTCTaGAGGCTGGATGTCCAAGATCATAGTGTCAATAGG | + |
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Preference number: 6 (lower is better) Translates to: RDQEPTNSGHKF*RLDVQDHSVNR Trigger: CCTATTGACACTATGATCTTGGACATCCAGCCTCCAGAACTTGTGTCCGGAATTGGTAGGTTCTTGGTCTCG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663971.1 |
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| CDS CAA 72 bp | ACGATGGATAAAACAGACGTCGTGGTGTCTCACATGTaGCTTGCAGTGCCCAGCACTTTCTCAAAAGGATCC | + |
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Preference number: 6 (lower is better) Translates to: TMDKTDVVVSHM*LAVPSTFSKGS Trigger: GGATCCTTTTGAGAAAGTGCTGGGCACTGCAAGCAACATGTGAGACACCACGACGTCTGTTTTATCCATCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657605.1 ENST00000662535.1 ENST00000665853.1 |
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| CDS CAA 90 bp | AGCACGTATCCCCTGAGAGTTAGACCAGGCACTCTTGTGATGACATaGAAAAGACGTGTGGCACCGCTTCTCAGAAAGCCTTCTTCTATA | + |
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Preference number: 6 (lower is better) Translates to: STYPLRVRPGTLVMT*KRRVAPLLRKPSSI Trigger: TATAGAAGAAGGCTTTCTGAGAAGCGGTGCCACACGTCTTTTCAATGTCATCACAAGAGTGCCTGGTCTAACTCTCAGGGGATACGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657605.1 ENST00000662535.1 ENST00000665853.1 |
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| CDS GCA 72 bp | CACTTCTACCTGCAAAGGAGGTTAGGAAATGCAATTTaGAGCTGGCTACGTACAGCCTCACTGAAAATCAGG | + |
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Preference number: 6 (lower is better) Translates to: HFYLQRRLGNAI*SWLRTASLKIR Trigger: CCTGATTTTCAGTGAGGCTGTACGTAGCCAGCTGCAAATTGCATTTCCTAACCTCCTTTGCAGGTAGAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517925.2 |
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| CDS GCA 72 bp | TTGATATCTGTGGGGAATTGTTTCCAGGAATCCCTGTaGCTAGATCAGGAACCTTATGATGGCAGGAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: LISVGNCFQESL*LDQEPYDGRSP Trigger: TGGACTCCTGCCATCATAAGGTTCCTGATCTAGGCACAGGGATTCCTGGAAACAATTCCCCACAGATATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657605.1 ENST00000662535.1 ENST00000665853.1 |
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| CDS CCA 72 bp | TATGGTTTCTTCTCTGCTCCTAGGAGTTCTGGAGGCTaGATGTCCAAGATCATAGTGTCAATAGGGTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: YGFFSAPRSSGG*MSKIIVSIGLG Trigger: ACCCAACCCTATTGACACTATGATCTTGGACATCCAGCCTCCAGAACTCCTAGGAGCAGAGAAGAAACCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000524286.2 ENST00000662535.1 ENST00000663873.1 ENST00000663915.1 |
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| CDS CCA 72 bp | AAGAACCTACCAATTCCGGACACAAGTTCTGGAGGCTaGATGTCCAAGATCATAGTGTCAATAGGGTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: KNLPIPDTSSGG*MSKIIVSIGLG Trigger: ACCCAACCCTATTGACACTATGATCTTGGACATCCAGCCTCCAGAACTTGTGTCCGGAATTGGTAGGTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663971.1 |
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| CDS CAA 72 bp | CCACTTCTACCTGCAAAGGAGGTTAGGAAATGCAATTaGCAGCTGGCTACGTACAGCCTCACTGAAAATCAG | + |
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Preference number: 6 (lower is better) Translates to: PLLPAKEVRKCN*QLATYSLTENQ Trigger: CTGATTTTCAGTGAGGCTGTACGTAGCCAGCTGCAAATTGCATTTCCTAACCTCCTTTGCAGGTAGAAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517925.2 |
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| CDS CAA 72 bp | TGGATAAAACAGACGTCGTGGTGTCTCACATGTTGCTaGCAGTGCCCAGCACTTTCTCAAAAGGATCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: WIKQTSWCLTCC*QCPALSQKDPE Trigger: TTCAGGATCCTTTTGAGAAAGTGCTGGGCACTGCAAGCAACATGTGAGACACCACGACGTCTGTTTTATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657605.1 ENST00000662535.1 ENST00000665853.1 |
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| CDS CAA 90 bp | CTGAGTATCAGCGCCACAAATTTCATTGCCATTCACGTGGTAATCTaGTGCACTGGGGATCATCAATACAGGTACAATGATGTGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: LSISATNFIAIHVVI*CTGDHQYRYNDVEA Trigger: GGCTTCCACATCATTGTACCTGTATTGATGATCCCCAGTGCACAAGATTACCACGTGAATGGCAATGAAATTTGTGGCGCTGATACTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664220.1 |
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| CDS CAA 90 bp | TTTCAAGGCTGGCTCTCAATGTGGCTGTGGGTTGCTCCCTACTCATaGCTCAGATTGAAATATAAACCAGACATGATATTGGGCTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: FQGWLSMWLWVAPYS*LRLKYKPDMILGWH Trigger: ATGCCAGCCCAATATCATGTCTGGTTTATATTTCAATCTGAGCAATGAGTAGGGAGCAACCCACAGCCACATTGAGAGCCAGCCTTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657605.1 ENST00000662535.1 ENST00000665853.1 |
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| CDS CCA 72 bp | TGTGAAGCTGCATTATTTTGGCTCAGTTCTGGAGGCTaGATGTCCAAGATCATAGTGTCAATAGGGTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: CEAALFWLSSGG*MSKIIVSIGLG Trigger: ACCCAACCCTATTGACACTATGATCTTGGACATCCAGCCTCCAGAACTGAGCCAAAATAATGCAGCTTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670857.1 |
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| CDS TCA 72 bp | GCAAGGTTCTTCACATTTTCAATTTGCAGCCTTAGTTaGAGGAAGCACTGGGATAGAGTTTCAAGCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: ARFFTFSICSLS*RKHWDRVSSTS Trigger: GCTGGTGCTTGAAACTCTATCCCAGTGCTTCCTTCAACTAAGGCTGCAAATTGAAAATGTGAAGAACCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518540.5 ENST00000664220.1 |
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| CDS CAA 72 bp | TTGAAGTCTCTCCCAGAAACTTCCACTTTTGTTTCATaGGCCAGAATGATCACATGGCCACTTCTACCTGCA | + |
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Preference number: 6 (lower is better) Translates to: LKSLPETSTFVS*ARMITWPLLPA Trigger: TGCAGGTAGAAGTGGCCATGTGATCATTCTGGCCAATGAAACAAAAGTGGAAGTTTCTGGGAGAGACTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517925.2 |
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| CDS CAA 72 bp | ACCAATATCCATCTCGTGACTACATCATGCACGCCCTaGCTAAGTCACTTAATAGGCATTACCTCTGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: TNIHLVTTSCTP*LSHLIGITSVR Trigger: TCTCACAGAGGTAATGCCTATTAAGTGACTTAGCAAGGGCGTGCATGATGTAGTCACGAGATGGATATTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664220.1 |
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| CDS CAA 72 bp | GTGGAAGCCTGGGCAAATTATTTAGCAGGTGAGATTTaGTGCGGTCGATCAATGAGTGACAAGAAACCTAGA | + |
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Preference number: 6 (lower is better) Translates to: VEAWANYLAGEI*CGRSMSDKKPR Trigger: TCTAGGTTTCTTGTCACTCATTGATCGACCGCACAAAATCTCACCTGCTAAATAATTTGCCCAGGCTTCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664220.1 |
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| CDS CAA 90 bp | ATCACATGGCCACTTCTACCTGCAAAGGAGGTTAGGAAATGCAATTaGCAGCTGGCTACGTACAGCCTCACTGAAAATCAGGTTATATTA | + |
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Preference number: 6 (lower is better) Translates to: ITWPLLPAKEVRKCN*QLATYSLTENQVIL Trigger: TAATATAACCTGATTTTCAGTGAGGCTGTACGTAGCCAGCTGCAAATTGCATTTCCTAACCTCCTTTGCAGGTAGAAGTGGCCATGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517925.2 |
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| CDS CAA 90 bp | AGTACACTAGGGAAAGACAGCATCAATATTAGGCATACAGATGGTTaGTTAACGGAGTTCTGGAGGCTGGATGTCCAAGATCATAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: STLGKDSINIRHTDG*LTEFWRLDVQDHSV Trigger: GACACTATGATCTTGGACATCCAGCCTCCAGAACTCCGTTAACAAACCATCTGTATGCCTAATATTGATGCTGTCTTTCCCTAGTGTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000657605.1 ENST00000657671.1 ENST00000662861.1 ENST00000665853.1 ENST00000669481.1 |
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| CDS TCA 72 bp | GAAATTAATAGTGATATACATCGCTGGTGGAGACCCTaGGTATCAGCGCCACAAATTTCATTGCCATTCACG | + |
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Preference number: 6 (lower is better) Translates to: EINSDIHRWWRP*VSAPQISLPFT Trigger: CGTGAATGGCAATGAAATTTGTGGCGCTGATACTCAGGGTCTCCACCAGCGATGTATATCACTATTAATTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664220.1 |
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| CDS GCA 72 bp | ATCACTGTTACCAATATCCATCTCGTGACTACATCATaGACGCCCTTGCTAAGTCACTTAATAGGCATTACC | + |
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Preference number: 6 (lower is better) Translates to: ITVTNIHLVTTS*TPLLSHLIGIT Trigger: GGTAATGCCTATTAAGTGACTTAGCAAGGGCGTGCATGATGTAGTCACGAGATGGATATTGGTAACAGTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664220.1 |
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| CDS GCA 72 bp | GAAGCCTGGGCAAATTATTTAGCAGGTGAGATTTTGTaGGGTCGATCAATGAGTGACAAGAAACCTAGACTT | + |
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Preference number: 6 (lower is better) Translates to: EAWANYLAGEIL*GRSMSDKKPRL Trigger: AAGTCTAGGTTTCTTGTCACTCATTGATCGACCGCACAAAATCTCACCTGCTAAATAATTTGCCCAGGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664220.1 |
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| CDS GCA 72 bp | GCCACAAATTTCATTGCCATTCACGTGGTAATCTTGTaGACTGGGGATCATCAATACAGGTACAATGATGTG | + |
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Preference number: 6 (lower is better) Translates to: ATNFIAIHVVIL*TGDHQYRYNDV Trigger: CACATCATTGTACCTGTATTGATGATCCCCAGTGCACAAGATTACCACGTGAATGGCAATGAAATTTGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664220.1 |
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| CDS CCA 72 bp | TACCTGCAAAGGAGGTTAGGAAATGCAATTTGCAGCTaGCTACGTACAGCCTCACTGAAAATCAGGTTATAT | + |
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Preference number: 6 (lower is better) Translates to: YLQRRLGNAICS*LRTASLKIRLY Trigger: ATATAACCTGATTTTCAGTGAGGCTGTACGTAGCCAGCTGCAAATTGCATTTCCTAACCTCCTTTGCAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517925.2 |
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| CDS CCA 72 bp | TTCTGTCCATTAAGGAGATGTGAAGCTGCATTATTTTaGCTCAGTTCTGGAGGCTGGATGTCCAAGATCATA | + |
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Preference number: 6 (lower is better) Translates to: FCPLRRCEAALF*LSSGGWMSKII Trigger: TATGATCTTGGACATCCAGCCTCCAGAACTGAGCCAAAATAATGCAGCTTCACATCTCCTTAATGGACAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670857.1 |
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| CDS CAA 72 bp | AGCGCCACAAATTTCATTGCCATTCACGTGGTAATCTaGTGCACTGGGGATCATCAATACAGGTACAATGAT | + |
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Preference number: 6 (lower is better) Translates to: SATNFIAIHVVI*CTGDHQYRYND Trigger: ATCATTGTACCTGTATTGATGATCCCCAGTGCACAAGATTACCACGTGAATGGCAATGAAATTTGTGGCGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664220.1 |
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| CDS CAA 90 bp | ATAACTGCTTTCAGGCTAGACGGAGTGCCAACATCCAACTATGTCTaGCCTAATTCTTACTCTTTGAGATGTACTTTCTGGCCGAATACA | + |
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Preference number: 6 (lower is better) Translates to: ITAFRLDGVPTSNYV*PNSYSLRCTFWPNT Trigger: TGTATTCGGCCAGAAAGTACATCTCAAAGAGTAAGAATTAGGCAAGACATAGTTGGATGTTGGCACTCCGTCTAGCCTGAAAGCAGTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657605.1 ENST00000662535.1 ENST00000665853.1 |
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| CDS TCA 72 bp | AAATATCCAATTACAGAATCTACAGGGCAAATCTACTaGGCCCTGGGACTGCTAAAGTTGAATTCAGGCTAC | + |
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Preference number: 6 (lower is better) Translates to: KYPITESTGQIY*ALGLLKLNSGY Trigger: GTAGCCTGAATTCAACTTTAGCAGTCCCAGGGCTCAGTAGATTTGCCCTGTAGATTCTGTAATTGGATATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000518540.5 ENST00000669481.1 ENST00000670857.1 |
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| CDS CCA 72 bp | AATATTAGGCATACAGATGGTTTGTTAACGGAGTTCTaGAGGCTGGATGTCCAAGATCATAGTGTCAATAGG | + |
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Preference number: 6 (lower is better) Translates to: NIRHTDGLLTEF*RLDVQDHSVNR Trigger: CCTATTGACACTATGATCTTGGACATCCAGCCTCCAGAACTCCGTTAACAAACCATCTGTATGCCTAATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000657605.1 ENST00000657671.1 ENST00000662861.1 ENST00000665853.1 ENST00000669481.1 |
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| CDS CAA 90 bp | ATCACTGTTACCAATATCCATCTCGTGACTACATCATGCACGCCCTaGCTAAGTCACTTAATAGGCATTACCTCTGTGAGAAGAATTAAG | + |
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Preference number: 6 (lower is better) Translates to: ITVTNIHLVTTSCTP*LSHLIGITSVRRIK Trigger: CTTAATTCTTCTCACAGAGGTAATGCCTATTAAGTGACTTAGCAAGGGCGTGCATGATGTAGTCACGAGATGGATATTGGTAACAGTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664220.1 |
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| CDS CAA 90 bp | TACAATGATGTGGAAGCCTGGGCAAATTATTTAGCAGGTGAGATTTaGTGCGGTCGATCAATGAGTGACAAGAAACCTAGACTTAATAGA | + |
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Preference number: 6 (lower is better) Translates to: YNDVEAWANYLAGEI*CGRSMSDKKPRLNR Trigger: TCTATTAAGTCTAGGTTTCTTGTCACTCATTGATCGACCGCACAAAATCTCACCTGCTAAATAATTTGCCCAGGCTTCCACATCATTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664220.1 |
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| CDS TCA 72 bp | AGTTCTATTTGGGGCTCAGGAAGTGTAGGTGACCATTaGTGTGGTAGTGATAACAAATGCACAAAACAATCT | + |
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Preference number: 6 (lower is better) Translates to: SSIWGSGSVGDH*CGSDNKCTKQS Trigger: AGATTGTTTTGTGCATTTGTTATCACTACCACATCAATGGTCACCTACACTTCCTGAGCCCCAAATAGAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000518540.5 ENST00000519062.6 ENST00000669481.1 ENST00000670857.1 |
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| CDS CAA 72 bp | CACTGGAGTCTGTATAGCATTTCAGTTCTTTGCTGTTaGCTCCTTGTTAGAATTTTCACAGAAGGAGATCCA | + |
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Preference number: 6 (lower is better) Translates to: HWSLYSISVLCC*LLVRIFTEGDP Trigger: TGGATCTCCTTCTGTGAAAATTCTAACAAGGAGCAAACAGCAAAGAACTGAAATGCTATACAGACTCCAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518540.5 ENST00000664220.1 |
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| CDS CAA 72 bp | CCAACATCCAACTATGTCTTGCCTAATTCTTACTCTTaGAGATGTACTTTCTGGCCGAATACAATCATCCCT | + |
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Preference number: 6 (lower is better) Translates to: PTSNYVLPNSYS*RCTFWPNTIIP Trigger: AGGGATGATTGTATTCGGCCAGAAAGTACATCTCAAAGAGTAAGAATTAGGCAAGACATAGTTGGATGTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657605.1 ENST00000662535.1 ENST00000665853.1 |
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| CDS TCA 72 bp | CAACATCCAACTATGTCTTGCCTAATTCTTACTCTTTaGGATGTACTTTCTGGCCGAATACAATCATCCCTT | + |
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Preference number: 6 (lower is better) Translates to: QHPTMSCLILTL*DVLSGRIQSSL Trigger: AAGGGATGATTGTATTCGGCCAGAAAGTACATCTCAAAGAGTAAGAATTAGGCAAGACATAGTTGGATGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657605.1 ENST00000662535.1 ENST00000665853.1 |
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| CDS CAA 72 bp | GTCTGTATAGCATTTCAGTTCTTTGCTGTTTGCTCCTaGTTAGAATTTTCACAGAAGGAGATCCAAAGACAG | + |
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Preference number: 6 (lower is better) Translates to: VCIAFQFFAVCS*LEFSQKEIQRQ Trigger: CTGTCTTTGGATCTCCTTCTGTGAAAATTCTAACAAGGAGCAAACAGCAAAGAACTGAAATGCTATACAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518540.5 ENST00000664220.1 |
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