Pregenerated sensors for LINC01591 (Homo sapiens)
Ensembl gene IDs: ENSG00000254083Ensembl transcript IDs: ENST00000520101.5, ENST00000522279.5, ENST00000524070.1, ENST00000657881.1, ENST00000660529.1
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGCTCCTCTGTTCTGAGAAAGCGGGTGCGGAGTTCCACATTCTCCTaGATGCCTTCCATGACAGGGCTCGCTGAGAGACTCGGGAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: CSSVLRKRVRSSTFS*MPSMTGLAERLGSG Trigger: CCCGCTCCCGAGTCTCTCAGCGAGCCCTGTCATGGAAGGCATCCAGGAGAATGTGGAACTCCGCACCCGCTTTCTCAGAACAGAGGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000520101.5 ENST00000522279.5 ENST00000524070.1 |
||
| CDS GCA 90 bp | GGACAGCACGCTCCTTTGTGGGAACACACAACACTCCCTGCCATCTaGCTGAGGCAGGGAGAAAAGAAGACAATGTTCTGTCCTCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GQHAPLWEHTTLPAI*LRQGEKKTMFCPQQ Trigger: CTGCTGAGGACAGAACATTGTCTTCTTTTCTCCCTGCCTCAGGCAGATGGCAGGGAGTGTTGTGTGTTCCCACAAAGGAGCGTGCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000520101.5 ENST00000522279.5 ENST00000524070.1 |
||
| CDS CCA 90 bp | CTTGTCCTCAGGGTCTCGGTCCCTAGTGCACAGACCATTCAAACATaGGGCCCATCCTGTGGTACCTCTCAATGCTGTGATTCTGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LVLRVSVPSAQTIQT*GPSCGTSQCCDSEG Trigger: ACCCTCAGAATCACAGCATTGAGAGGTACCACAGGATGGGCCCCATGTTTGAATGGTCTGTGCACTAGGGACCGAGACCCTGAGGACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657881.1 |
||
| CDS TCA 90 bp | CCTCTCAATGCTGTGATTCTGAGGGTCATGGATGCTCCTCTGTTCTaGGAAAGCGGGTGCGGAGTTCCACATTCTCCTGGATGCCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLNAVILRVMDAPLF*ESGCGVPHSPGCLP Trigger: TGGAAGGCATCCAGGAGAATGTGGAACTCCGCACCCGCTTTCTCAGAACAGAGGAGCATCCATGACCCTCAGAATCACAGCATTGAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520101.5 ENST00000522279.5 ENST00000524070.1 ENST00000657881.1 |
||
| CDS GCA 90 bp | CCATCCTGTGGTACCTCTCAATGCTGTGATTCTGAGGGTCATGGATaGTCCTCTGTTCTGAGAAAGCGGGTGCGGAGTTCCACATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSCGTSQCCDSEGHG*SSVLRKRVRSSTFS Trigger: GGAGAATGTGGAACTCCGCACCCGCTTTCTCAGAACAGAGGAGCATCCATGACCCTCAGAATCACAGCATTGAGAGGTACCACAGGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657881.1 |
||
| CDS TCA 90 bp | GTTCATCACTGCACAAGCTGGGCAAATGAGAGCCAGTCCTGGGACTaGGTCAGTTGGAGAAAAAGTGCTCGGCTTCCTCCAGATTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VHHCTSWANESQSWD*VSWRKSARLPPDCQ Trigger: TTGGCAATCTGGAGGAAGCCGAGCACTTTTTCTCCAACTGACTCAGTCCCAGGACTGGCTCTCATTTGCCCAGCTTGTGCAGTGATGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657881.1 |
||
| CDS GCA 90 bp | ACAAATGCAGAGACCTCTCAATGCTGTGATTCTGAGGGTCATGGATaGTCCTCTGTTCTGAGAAAGCGGGTGCGGAGTTCCACATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TNAETSQCCDSEGHG*SSVLRKRVRSSTFS Trigger: GGAGAATGTGGAACTCCGCACCCGCTTTCTCAGAACAGAGGAGCATCCATGACCCTCAGAATCACAGCATTGAGAGGTCTCTGCATTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520101.5 |
||
| CDS GCA 90 bp | GCACAGACCATTCAAACATGGGGCCCATCCTGTGGTACCTCTCAATaGTGTGATTCTGAGGGTCATGGATGCTCCTCTGTTCTGAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: AQTIQTWGPSCGTSQ*CDSEGHGCSSVLRK Trigger: CTTTCTCAGAACAGAGGAGCATCCATGACCCTCAGAATCACAGCATTGAGAGGTACCACAGGATGGGCCCCATGTTTGAATGGTCTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657881.1 |
||
| CDS GCA 90 bp | GAGTTGATACATACCTCTCAATGCTGTGATTCTGAGGGTCATGGATaGTCCTCTGTTCTGAGAAAGCGGGTGCGGAGTTCCACATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ELIHTSQCCDSEGHG*SSVLRKRVRSSTFS Trigger: GGAGAATGTGGAACTCCGCACCCGCTTTCTCAGAACAGAGGAGCATCCATGACCCTCAGAATCACAGCATTGAGAGGTATGTATCAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522279.5 ENST00000524070.1 |
||
| CDS GCA 90 bp | TATCACATCGGGAGGAGCCACATGACAGTGAAGAACGCGGACAAATaGAGAGACCTGGAGTTGATACATACCAATCACAGGCTTGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: YHIGRSHMTVKNADK*RDLELIHTNHRLVL Trigger: GAGGACAAGCCTGTGATTGGTATGTATCAACTCCAGGTCTCTGCATTTGTCCGCGTTCTTCACTGTCATGTGGCTCCTCCCGATGTGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657881.1 |
||
| CDS GCA 90 bp | TATCACATCGGGAGGAGCCACATGACAGTGAAGAACGCGGACAAATaGAGAGACCTGGAGTTGATACATACCTCTCAATGCTGTGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: YHIGRSHMTVKNADK*RDLELIHTSQCCDS Trigger: AGAATCACAGCATTGAGAGGTATGTATCAACTCCAGGTCTCTGCATTTGTCCGCGTTCTTCACTGTCATGTGGCTCCTCCCGATGTGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522279.5 ENST00000524070.1 |
||
| CDS TCA 90 bp | TGCTCCGAAGCGGAAAGCCAGGATAAATATGAGGCTCATCTTGTGTaGTTCTCTTTCCTTCAGGTTGATAGTCCTGTGCTGCTTGACATC | + |
|
Preference number: 5 (lower is better) Translates to: CSEAESQDKYEAHLV*FSFLQVDSPVLLDI Trigger: GATGTCAAGCAGCACAGGACTATCAACCTGAAGGAAAGAGAATCACACAAGATGAGCCTCATATTTATCCTGGCTTTCCGCTTCGGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000522279.5 ENST00000657881.1 ENST00000660529.1 |
||
| CDS TCA 90 bp | CTTTACACAATTTGTATAGGTTCATCACTGCACAAGCTGGGCAAATaGGAGCCAGTCCTGGGACTGAGTCAGTTGGAGAAAAAGTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LYTICIGSSLHKLGK*EPVLGLSQLEKKCS Trigger: CGAGCACTTTTTCTCCAACTGACTCAGTCCCAGGACTGGCTCTCATTTGCCCAGCTTGTGCAGTGATGAACCTATACAAATTGTGTAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657881.1 |
||
| CDS CCA 90 bp | GTAGAACAAATGTGGTCCTGTGTGCCTCTTACAGATCCTATCTCTTaGGTACTCTTGAACAAACATGAGGTCTGCCTCCTTGGTTTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VEQMWSCVPLTDPIS*VLLNKHEVCLLGLA Trigger: TGCTAAACCAAGGAGGCAGACCTCATGTTTGTTCAAGAGTACCCAAGAGATAGGATCTGTAAGAGGCACACAGGACCACATTTGTTCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000522279.5 ENST00000657881.1 ENST00000660529.1 |
||
| CDS TCA 90 bp | TGTGCCTCTTACAGATCCTATCTCTTGGGTACTCTTGAACAAACATaGGGTCTGCCTCCTTGGTTTAGCAATACTCTTTCACTTGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CASYRSYLLGTLEQT*GLPPWFSNTLSLGF Trigger: AAACCCAAGTGAAAGAGTATTGCTAAACCAAGGAGGCAGACCTCATGTTTGTTCAAGAGTACCCAAGAGATAGGATCTGTAAGAGGCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000522279.5 ENST00000657881.1 ENST00000660529.1 |
||
| CDS GCA 90 bp | CTTACAGATCCTATCTCTTGGGTACTCTTGAACAAACATGAGGTCTaGCTCCTTGGTTTAGCAATACTCTTTCACTTGGGTTTCACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LTDPISWVLLNKHEV*LLGLAILFHLGFTS Trigger: AGAAGTGAAACCCAAGTGAAAGAGTATTGCTAAACCAAGGAGGCAGACCTCATGTTTGTTCAAGAGTACCCAAGAGATAGGATCTGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000522279.5 ENST00000657881.1 ENST00000660529.1 |
||
| CDS TCA 90 bp | CTTTCCTTCAGGTTGATAGTCCTGTGCTGCTTGACATCCAATGCCTaGAAACATTTGCTTTACACAATTTGTATAGGTTCATCACTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LSFRLIVLCCLTSNA*KHLLYTICIGSSLH Trigger: GTGCAGTGATGAACCTATACAAATTGTGTAAAGCAAATGTTTTCAGGCATTGGATGTCAAGCAGCACAGGACTATCAACCTGAAGGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657881.1 |
||
| CDS TCA 90 bp | CTTTCCTTCAGGTTGATAGTCCTGTGCTGCTTGACATCCAATGCCTaGAAACATTTGCTTTACACAATTTGTATAGGTTCATCACATGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSFRLIVLCCLTSNA*KHLLYTICIGSSHD Trigger: ATCATGTGATGAACCTATACAAATTGTGTAAAGCAAATGTTTTCAGGCATTGGATGTCAAGCAGCACAGGACTATCAACCTGAAGGAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522279.5 ENST00000660529.1 |
||
| CDS TCA 72 bp | GCTGTGATTCTGAGGGTCATGGATGCTCCTCTGTTCTaGGAAAGCGGGTGCGGAGTTCCACATTCTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: AVILRVMDAPLF*ESGCGVPHSPG Trigger: TCCAGGAGAATGTGGAACTCCGCACCCGCTTTCTCAGAACAGAGGAGCATCCATGACCCTCAGAATCACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520101.5 ENST00000522279.5 ENST00000524070.1 ENST00000657881.1 |
||
| CDS GCA 72 bp | GAGACCTCTCAATGCTGTGATTCTGAGGGTCATGGATaGTCCTCTGTTCTGAGAAAGCGGGTGCGGAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ETSQCCDSEGHG*SSVLRKRVRSS Trigger: GGAACTCCGCACCCGCTTTCTCAGAACAGAGGAGCATCCATGACCCTCAGAATCACAGCATTGAGAGGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520101.5 |
||
| CDS GCA 72 bp | GGTACCTCTCAATGCTGTGATTCTGAGGGTCATGGATaGTCCTCTGTTCTGAGAAAGCGGGTGCGGAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GTSQCCDSEGHG*SSVLRKRVRSS Trigger: GGAACTCCGCACCCGCTTTCTCAGAACAGAGGAGCATCCATGACCCTCAGAATCACAGCATTGAGAGGTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657881.1 |
||
| CDS CCA 72 bp | AGGGTCTCGGTCCCTAGTGCACAGACCATTCAAACATaGGGCCCATCCTGTGGTACCTCTCAATGCTGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: RVSVPSAQTIQT*GPSCGTSQCCD Trigger: ATCACAGCATTGAGAGGTACCACAGGATGGGCCCCATGTTTGAATGGTCTGTGCACTAGGGACCGAGACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657881.1 |
||
| CDS CAA 72 bp | CCTCCAGATTGCCAACATGATGGACCCAAGCCTGGTTaGTCCACGGGCATCTTTGCTATCACATCGGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PPDCQHDGPKPG*STGIFAITSGG Trigger: TCCTCCCGATGTGATAGCAAAGATGCCCGTGGACAAACCAGGCTTGGGTCCATCATGTTGGCAATCTGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000520101.5 ENST00000522279.5 ENST00000524070.1 ENST00000657881.1 ENST00000660529.1 |
||
| CDS GCA 72 bp | CATACCTCTCAATGCTGTGATTCTGAGGGTCATGGATaGTCCTCTGTTCTGAGAAAGCGGGTGCGGAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: HTSQCCDSEGHG*SSVLRKRVRSS Trigger: GGAACTCCGCACCCGCTTTCTCAGAACAGAGGAGCATCCATGACCCTCAGAATCACAGCATTGAGAGGTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522279.5 ENST00000524070.1 |
||
| CDS GCA 72 bp | GTCAGTTGGAGAAAAAGTGCTCGGCTTCCTCCAGATTaGCAACATGATGGACCCAAGCCTGGTTTGTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: VSWRKSARLPPD*QHDGPKPGLST Trigger: CGTGGACAAACCAGGCTTGGGTCCATCATGTTGGCAATCTGGAGGAAGCCGAGCACTTTTTCTCCAACTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000520101.5 ENST00000522279.5 ENST00000524070.1 ENST00000657881.1 ENST00000660529.1 |
||
| CDS CAA 90 bp | GAGAGTGCTCCGAAGCGGAAAGCCAGGATAAATATGAGGCTCATCTaGTGTGATTCTCTTTCCTTCAGGTTGATAGTCCTGTGCTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ESAPKRKARINMRLI*CDSLSFRLIVLCCL Trigger: CAAGCAGCACAGGACTATCAACCTGAAGGAAAGAGAATCACACAAGATGAGCCTCATATTTATCCTGGCTTTCCGCTTCGGAGCACTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000522279.5 ENST00000657881.1 ENST00000660529.1 |
||
| CDS TCA 72 bp | ATTTGTATAGGTTCATCACTGCACAAGCTGGGCAAATaGGAGCCAGTCCTGGGACTGAGTCAGTTGGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: ICIGSSLHKLGK*EPVLGLSQLEK Trigger: TTTCTCCAACTGACTCAGTCCCAGGACTGGCTCTCATTTGCCCAGCTTGTGCAGTGATGAACCTATACAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657881.1 |
||
| CDS CCA 72 bp | CTGTCCTCAGCAGGAACTGGCGCTATCAGAAAGAGATaGAACAAGAAGATCTGTTCCATTTCAAGCCCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LSSAGTGAIRKR*NKKICSISSPR Trigger: TCTTGGGCTTGAAATGGAACAGATCTTCTTGTTCCATCTCTTTCTGATAGCGCCAGTTCCTGCTGAGGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000520101.5 ENST00000522279.5 ENST00000524070.1 |
||
| CDS CCA 72 bp | ATGTGGTCCTGTGTGCCTCTTACAGATCCTATCTCTTaGGTACTCTTGAACAAACATGAGGTCTGCCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: MWSCVPLTDPIS*VLLNKHEVCLL Trigger: AAGGAGGCAGACCTCATGTTTGTTCAAGAGTACCCAAGAGATAGGATCTGTAAGAGGCACACAGGACCACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000522279.5 ENST00000657881.1 ENST00000660529.1 |
||
| CDS CAA 72 bp | AGCAATACTCTTTCACTTGGGTTTCACTTCTCTGTGTaGAAGTTGAGAGAGTGCTCCGAAGCGGAAAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SNTLSLGFHFSV*KLRECSEAESQ Trigger: CTGGCTTTCCGCTTCGGAGCACTCTCTCAACTTCAACACAGAGAAGTGAAACCCAAGTGAAAGAGTATTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000522279.5 ENST00000657881.1 ENST00000660529.1 |
||
| CDS GCA 72 bp | AAATGCAGAGACCTGGAGTTGATACATACCTCTCAATaGTGTGATTCTGAGGGTCATGGATGCTCCTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: KCRDLELIHTSQ*CDSEGHGCSSV Trigger: AACAGAGGAGCATCCATGACCCTCAGAATCACAGCATTGAGAGGTATGTATCAACTCCAGGTCTCTGCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522279.5 ENST00000524070.1 |
||
| CDS CAA 72 bp | CCGAAGCGGAAAGCCAGGATAAATATGAGGCTCATCTaGTGTGATTCTCTTTCCTTCAGGTTGATAGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PKRKARINMRLI*CDSLSFRLIVL Trigger: CAGGACTATCAACCTGAAGGAAAGAGAATCACACAAGATGAGCCTCATATTTATCCTGGCTTTCCGCTTCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000522279.5 ENST00000657881.1 ENST00000660529.1 |
||
| CDS CAA 72 bp | ACTCTTTCACTTGGGTTTCACTTCTCTGTGTTGAAGTaGAGAGAGTGCTCCGAAGCGGAAAGCCAGGATAAA | + |
|
Preference number: 6 (lower is better) Translates to: TLSLGFHFSVLK*RECSEAESQDK Trigger: TTTATCCTGGCTTTCCGCTTCGGAGCACTCTCTCAACTTCAACACAGAGAAGTGAAACCCAAGTGAAAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000522279.5 ENST00000657881.1 ENST00000660529.1 |
||
| CDS CAA 90 bp | ATGTGGTCCTGTGTGCCTCTTACAGATCCTATCTCTTGGGTACTCTaGAACAAACATGAGGTCTGCCTCCTTGGTTTAGCAATACTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: MWSCVPLTDPISWVL*NKHEVCLLGLAILF Trigger: AAAGAGTATTGCTAAACCAAGGAGGCAGACCTCATGTTTGTTCAAGAGTACCCAAGAGATAGGATCTGTAAGAGGCACACAGGACCACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000522279.5 ENST00000657881.1 ENST00000660529.1 |
||
| CDS GCA 72 bp | CCTATCTCTTGGGTACTCTTGAACAAACATGAGGTCTaGCTCCTTGGTTTAGCAATACTCTTTCACTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PISWVLLNKHEV*LLGLAILFHLG Trigger: ACCCAAGTGAAAGAGTATTGCTAAACCAAGGAGGCAGACCTCATGTTTGTTCAAGAGTACCCAAGAGATAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000522279.5 ENST00000657881.1 ENST00000660529.1 |
||
| CDS CAA 90 bp | GTGCTGCTTGACATCCAATGCCTGAAAACATTTGCTTTACACAATTaGTATAGGTTCATCACTGCACAAGCTGGGCAAATGAGAGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VLLDIQCLKTFALHN*YRFITAQAGQMRAS Trigger: ACTGGCTCTCATTTGCCCAGCTTGTGCAGTGATGAACCTATACAAATTGTGTAAAGCAAATGTTTTCAGGCATTGGATGTCAAGCAGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657881.1 |
||
| CDS TCA 72 bp | TACAGATCCTATCTCTTGGGTACTCTTGAACAAACATaGGGTCTGCCTCCTTGGTTTAGCAATACTCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: YRSYLLGTLEQT*GLPPWFSNTLS Trigger: TGAAAGAGTATTGCTAAACCAAGGAGGCAGACCTCATGTTTGTTCAAGAGTACCCAAGAGATAGGATCTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000522279.5 ENST00000657881.1 ENST00000660529.1 |
||
| CDS GCA 72 bp | TTTTGTGATTATTTTTATGCAATGATCGATAATGAATaGAAATGGTCACGGTTTCCAAAGCCCGTAGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: FCDYFYAMIDNE*KWSRFPKPVGC Trigger: GCACCCTACGGGCTTTGGAAACCGTGACCATTTGCATTCATTATCGATCATTGCATAAAAATAATCACAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000522279.5 ENST00000657881.1 ENST00000660529.1 |
||
| CDS CCA 72 bp | GATTATTTTTATGCAATGATCGATAATGAATGCAAATaGTCACGGTTTCCAAAGCCCGTAGGGTGCAATACT | + |
|
Preference number: 6 (lower is better) Translates to: DYFYAMIDNECK*SRFPKPVGCNT Trigger: AGTATTGCACCCTACGGGCTTTGGAAACCGTGACCATTTGCATTCATTATCGATCATTGCATAAAAATAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000522279.5 ENST00000657881.1 ENST00000660529.1 |
||