Pregenerated sensors for LINC01586 (Homo sapiens)
Ensembl gene IDs: ENSG00000249487Ensembl transcript IDs: ENST00000506090.5, ENST00000558835.1, ENST00000560368.1, ENST00000660022.1, ENST00000660890.1
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGCGGAGCGCTGGACCCTGGCAGGAGTCGCAGGCTGCCCGCTGCTaGCCCGCGGACCGGCACCCCCTCCCCCAAAGCTGTTGCCATGGC | + |
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Preference number: 5 (lower is better) Translates to: QRSAGPWQESQAARC*PADRHPLPQSCCHG Trigger: GCCATGGCAACAGCTTTGGGGGAGGGGGTGCCGGTCCGCGGGCCAGCAGCGGGCAGCCTGCGACTCCTGCCAGGGTCCAGCGCTCCGCTG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000506090.5 |
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| CDS CCA 90 bp | GTCGTGTGTGCAGGCGAGGACCCGGGCAGGTGGGTGAGTCCCGCTTaGGCGCTGCCTGGGTGTGCTCTGCTCCAGCATGCGTCGGTCGAG | + |
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Preference number: 5 (lower is better) Translates to: VVCAGEDPGRWVSPA*ALPGCALLQHASVE Trigger: CTCGACCGACGCATGCTGGAGCAGAGCACACCCAGGCAGCGCCCAAGCGGGACTCACCCACCTGCCCGGGTCCTCGCCTGCACACACGAC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660890.1 |
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| CDS CCA 90 bp | CAACTGGATTCAGCACTAATGACGGACTCTACCCCAGCGGAGCGCTaGACCCTGGCAGGAGTCGCAGGCTGCCCGCTGCTGGCCCGCGGA | + |
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Preference number: 5 (lower is better) Translates to: QLDSALMTDSTPAER*TLAGVAGCPLLARG Trigger: TCCGCGGGCCAGCAGCGGGCAGCCTGCGACTCCTGCCAGGGTCCAGCGCTCCGCTGGGGTAGAGTCCGTCATTAGTGCTGAATCCAGTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506090.5 |
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| CDS CCA 90 bp | TCCAGGGTTGGGCCTGCTATGACCAGCCCGGGGAGGGGACGGGACTaGCTCTGGTGTCTCTTCTGGTCCGGGCACAACTGGATTCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: SRVGPAMTSPGRGRD*LWCLFWSGHNWIQH Trigger: GTGCTGAATCCAGTTGTGCCCGGACCAGAAGAGACACCAGAGCCAGTCCCGTCCCCTCCCCGGGCTGGTCATAGCAGGCCCAACCCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506090.5 |
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| CDS CCA 90 bp | GAGGTCCCCGGTCCCGTCCCCTCCTCCAGGTCAAGGGCTCGGGACTaGAGAAGCAGCCAACTGGAGCTGATATTCGGGAAGCTAAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: EVPGPVPSSRSRARD*RSSQLELIFGKLSL Trigger: CAGGCTTAGCTTCCCGAATATCAGCTCCAGTTGGCTGCTTCTCCAGTCCCGAGCCCTTGACCTGGAGGAGGGGACGGGACCGGGGACCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560368.1 |
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| CDS CCA 90 bp | AGCCAACTGGAGCTGATATTCGGGAAGCTAAGCCTGAGGCTGCTCTaGAGGGCCGGAGAAGCGAGCGGCCAGGCTTGGCACCCGCCAAAT | + |
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Preference number: 5 (lower is better) Translates to: SQLELIFGKLSLRLL*RAGEASGQAWHPPN Trigger: ATTTGGCGGGTGCCAAGCCTGGCCGCTCGCTTCTCCGGCCCTCCAGAGCAGCCTCAGGCTTAGCTTCCCGAATATCAGCTCCAGTTGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560368.1 |
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| CDS TCA 90 bp | CTGCCTGGGTGTGCTCTGCTCCAGCATGCGTCGGTCGAGAGTGAGTaGGAATACGTCTGTGAGCGGTCAGGTGAACCGGGTCTGACCTGC | + |
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Preference number: 5 (lower is better) Translates to: LPGCALLQHASVESE*EYVCERSGEPGLTC Trigger: GCAGGTCAGACCCGGTTCACCTGACCGCTCACAGACGTATTCTCACTCACTCTCGACCGACGCATGCTGGAGCAGAGCACACCCAGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660890.1 |
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| CDS CCA 90 bp | ATAGGAAATGGCCCTGCTATGACCAGCCCGGGGAGGGGACGGGACTaGCTCTGGTGTCTCTTCTGGTCCGGGCACAACTGGATTCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: IGNGPAMTSPGRGRD*LWCLFWSGHNWIQH Trigger: GTGCTGAATCCAGTTGTGCCCGGACCAGAAGAGACACCAGAGCCAGTCCCGTCCCCTCCCCGGGCTGGTCATAGCAGGGCCATTTCCTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660890.1 |
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| CDS GCA 90 bp | CCTGGACCCCAGCCCTGTGTACACTGGTCAGGGCTTCTCCCTGCATaGAGAATGCCAGCCCCTATTCAAGAGACATGGAAAGGCCATGAC | + |
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Preference number: 5 (lower is better) Translates to: PGPQPCVHWSGLLPA*RMPAPIQETWKGHD Trigger: GTCATGGCCTTTCCATGTCTCTTGAATAGGGGCTGGCATTCTGCATGCAGGGAGAAGCCCTGACCAGTGTACACAGGGCTGGGGTCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660890.1 |
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| CDS TCA 90 bp | AGAGTGAGTGAGAATACGTCTGTGAGCGGTCAGGTGAACCGGGTCTaGCCTGCCCAGGTAAGGTGGTGGAAGAATAGGAAATGGCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: RVSENTSVSGQVNRV*PAQVRWWKNRKWPC Trigger: GCAGGGCCATTTCCTATTCTTCCACCACCTTACCTGGGCAGGTCAGACCCGGTTCACCTGACCGCTCACAGACGTATTCTCACTCACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660890.1 |
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| CDS CCA 90 bp | AGTCTGACTAGGAGGAAATATCCTGCTGCCTGTGTTGGCTGGATGTaGGCAGCACAGATATTTGTGTGTCCGTCCAGGGTTGGGCCGGCA | + |
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Preference number: 5 (lower is better) Translates to: SLTRRKYPAACVGWM*AAQIFVCPSRVGPA Trigger: TGCCGGCCCAACCCTGGACGGACACACAAATATCTGTGCTGCCCACATCCAGCCAACACAGGCAGCAGGATATTTCCTCCTAGTCAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560368.1 |
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| CDS GCA 90 bp | CCCAGCCCTGTGTACACTGGTCAGGGCTTCTCCCTGCATGCAGAATaGCAGCCCCTATTCAAGAGACATGGAAAGGCCATGACATGGATA | + |
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Preference number: 5 (lower is better) Translates to: PSPVYTGQGFSLHAE*QPLFKRHGKAMTWI Trigger: TATCCATGTCATGGCCTTTCCATGTCTCTTGAATAGGGGCTGGCATTCTGCATGCAGGGAGAAGCCCTGACCAGTGTACACAGGGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660890.1 |
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| CDS CCA 90 bp | AGTCTGACTAGGAGGAAATATCCTGCTGCCTGTGTTGGCTGGATGTaGGCAGCACAGATATTTGTGTGTCCGTCCAGGGTTGGGCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: SLTRRKYPAACVGWM*AAQIFVCPSRVGPA Trigger: AGCAGGCCCAACCCTGGACGGACACACAAATATCTGTGCTGCCCACATCCAGCCAACACAGGCAGCAGGATATTTCCTCCTAGTCAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506090.5 |
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| CDS CCA 90 bp | ACACCCAGTCTGACTAGGAGGAAATATCCTGCTGCCTGTGTTGGCTaGATGTGGGCAGCACAGATATTTGTGTGTCCGTCCAGGGTTGGG | + |
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Preference number: 5 (lower is better) Translates to: TPSLTRRKYPAACVG*MWAAQIFVCPSRVG Trigger: CCCAACCCTGGACGGACACACAAATATCTGTGCTGCCCACATCCAGCCAACACAGGCAGCAGGATATTTCCTCCTAGTCAGACTGGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000506090.5 ENST00000560368.1 ENST00000660022.1 |
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| CDS CCA 90 bp | CTCACCAGTCTGACTAGGAGGAAATATCCTGCTGCCTGTGTTGGCTaGATGTGGGCAGCACAGATATTTGTGTGTCCGTCCAGGGTTGGG | + |
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Preference number: 5 (lower is better) Translates to: LTSLTRRKYPAACVG*MWAAQIFVCPSRVG Trigger: CCCAACCCTGGACGGACACACAAATATCTGTGCTGCCCACATCCAGCCAACACAGGCAGCAGGATATTTCCTCCTAGTCAGACTGGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558835.1 |
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| CDS CCA 90 bp | AGTCTGACTAGGAGGAAATATCCTGCTGCCTGTGTTGGCTGGATGTaGGCAGCACAGATATTTGTGTGTCCGTCCAGGGTTGGGCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: SLTRRKYPAACVGWM*AAQIFVCPSRVGPA Trigger: TGCAGGCCCAACCCTGGACGGACACACAAATATCTGTGCTGCCCACATCCAGCCAACACAGGCAGCAGGATATTTCCTCCTAGTCAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660022.1 |
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| CDS TCA 90 bp | CGCCCCCTAGATGCGCACTGGATCAGTAGTGGGTTTGTCATGTTCTaGAGCTCTCAAGGCTGCTTTGAAGCCTCAGTTTGTCGTGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: RPLDAHWISSGFVMF*SSQGCFEASVCRVC Trigger: GCACACACGACAAACTGAGGCTTCAAAGCAGCCTTGAGAGCTTCAGAACATGACAAACCCACTACTGATCCAGTGCGCATCTAGGGGGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660890.1 |
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| CDS CCA 90 bp | GATATTTGTGTGTCCGTCCAGGGTTGGGCATTTTTGTGTCCTGTCTaGTTCGTTGGTCACCAGTTTGCGCCCCCTAGATGCGCACTGGAT | + |
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Preference number: 5 (lower is better) Translates to: DICVSVQGWAFLCPV*FVGHQFAPPRCALD Trigger: ATCCAGTGCGCATCTAGGGGGCGCAAACTGGTGACCAACGAACCAGACAGGACACAAAAATGCCCAACCCTGGACGGACACACAAATATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000558835.1 |
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| CDS CCA 90 bp | TGGCTGGATGTGGGCAGCACAGATATTTGTGTGTCCGTCCAGGGTTaGGCATTTTTGTGTCCTGTCTGGTTCGTTGGTCACCAGTTTGCG | + |
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Preference number: 5 (lower is better) Translates to: WLDVGSTDICVSVQG*AFLCPVWFVGHQFA Trigger: CGCAAACTGGTGACCAACGAACCAGACAGGACACAAAAATGCCCAACCCTGGACGGACACACAAATATCTGTGCTGCCCACATCCAGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000558835.1 |
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| CDS CCA 90 bp | TTCACGGTGAAACCAGGACCTTCTTGCTCCCCCTTCCTGGGCAAGTaGCCTTTATCTACATGGTTTAGAACACCCAGTCTGACTAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: FTVKPGPSCSPFLGK*PLSTWFRTPSLTRR Trigger: CCTCCTAGTCAGACTGGGTGTTCTAAACCATGTAGATAAAGGCCACTTGCCCAGGAAGGGGGAGCAAGAAGGTCCTGGTTTCACCGTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000506090.5 ENST00000560368.1 ENST00000660022.1 |
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| CDS CCA 90 bp | AGTCTGACTAGGAGGAAATATCCTGCTGCCTGTGTTGGCTGGATGTaGGCAGCACAGATATTTGTGTGTCCGTCCAGGGTTGGGCATTTT | + |
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Preference number: 5 (lower is better) Translates to: SLTRRKYPAACVGWM*AAQIFVCPSRVGHF Trigger: AAAATGCCCAACCCTGGACGGACACACAAATATCTGTGCTGCCCACATCCAGCCAACACAGGCAGCAGGATATTTCCTCCTAGTCAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558835.1 |
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| CDS CCA 90 bp | GGGCTTCTCCCTGCATGCAGAATGCCAGCCCCTATTCAAGAGACATaGAAAGGCCATGACATGGATATTGTTTTAGAGAGAGGGAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: GLLPACRMPAPIQET*KGHDMDIVLERGRE Trigger: CTCTCTCCCTCTCTCTAAAACAATATCCATGTCATGGCCTTTCCATGTCTCTTGAATAGGGGCTGGCATTCTGCATGCAGGGAGAAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660890.1 |
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| CDS TCA 90 bp | ATGGATAGTATGGTAGACTGCCAAAACAGTGATTTATGTTCACGGTaGAACCAGGACCTTCTTGCTCCCCCTTCCTGGGCAAGTGGCCTT | + |
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Preference number: 5 (lower is better) Translates to: MDSMVDCQNSDLCSR*NQDLLAPPSWASGL Trigger: AAGGCCACTTGCCCAGGAAGGGGGAGCAAGAAGGTCCTGGTTTCACCGTGAACATAAATCACTGTTTTGGCAGTCTACCATACTATCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000506090.5 ENST00000560368.1 ENST00000660022.1 |
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| CDS TCA 90 bp | GAAGCAGAAGGGACAGATCCAACTGTGTGTCCCTGTGTGCATATTTaGCATAAATTGCAAACCTCCATTTCACCCCTTGGCCTCCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: EAEGTDPTVCPCVHI*HKLQTSISPLGLLQ Trigger: CTGCAGGAGGCCAAGGGGTGAAATGGAGGTTTGCAATTTATGTCAAATATGCACACAGGGACACACAGTTGGATCTGTCCCTTCTGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506090.5 ENST00000660022.1 |
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| CDS GCA 90 bp | GGACAGATCCAACTGTGTGTCCCTGTGTGCATATTTGACATAAATTaGAAACCTCCATTTCACCCCTTGGCCTCCTGCAGTCAAAAACTC | + |
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Preference number: 5 (lower is better) Translates to: GQIQLCVPVCIFDIN*KPPFHPLASCSQKL Trigger: GAGTTTTTGACTGCAGGAGGCCAAGGGGTGAAATGGAGGTTTGCAATTTATGTCAAATATGCACACAGGGACACACAGTTGGATCTGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000506090.5 ENST00000660022.1 |
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| CDS GCA 90 bp | AAAAAGAGGAAGCAGAAGGGACAGATCCAACTGTGTGTCCCTGTGTaGATATTTGACATAAATTGCAAACCTCCATTTCACCCCTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: KKRKQKGQIQLCVPV*IFDINCKPPFHPLA Trigger: GGCCAAGGGGTGAAATGGAGGTTTGCAATTTATGTCAAATATGCACACAGGGACACACAGTTGGATCTGTCCCTTCTGCTTCCTCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000506090.5 ENST00000660022.1 |
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| CDS GCA 90 bp | AAATGTATCACTCTGGTGTACGATGTTGACAATGGGGGAAGGCTGTaGATGTGTTGGAGTAGGGAGTGTAATGGAAACTCTACTTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: KCITLVYDVDNGGRL*MCWSRECNGNSTFC Trigger: GCAGAAAGTAGAGTTTCCATTACACTCCCTACTCCAACACATGCACAGCCTTCCCCCATTGTCAACATCGTACACCAGAGTGATACATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000506090.5 ENST00000660022.1 |
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| CDS CCA 90 bp | ATGATGTGTCCATGTAGGTTCATCAATGTAACAAATGTATCACTCTaGTGTACGATGTTGACAATGGGGGAAGGCTGTGCATGTGTTGGA | + |
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Preference number: 5 (lower is better) Translates to: MMCPCRFINVTNVSL*CTMLTMGEGCACVG Trigger: TCCAACACATGCACAGCCTTCCCCCATTGTCAACATCGTACACCAGAGTGATACATTTGTTACATTGATGAACCTACATGGACACATCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000506090.5 ENST00000660022.1 |
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| CDS TCA 90 bp | ATGTCAAGAGCTCGTCTTTATCTTCTCTCAAATGATTTGCTTCAGTaGCTAACTGATGACTCCTACAAGCTGTTTTCAGTTGCTGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: MSRARLYLLSNDLLQ*LTDDSYKLFSVAAS Trigger: AGAGGCAGCAACTGAAAACAGCTTGTAGGAGTCATCAGTTAGTCACTGAAGCAAATCATTTGAGAGAAGATAAAGACGAGCTCTTGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000506090.5 ENST00000560368.1 ENST00000660022.1 |
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| CDS CCA 90 bp | AAATGTATAACATCGAGAGTGAACCCTAATGCAAACTGTGGACTTTaGGTGATAATGATGTGTCCATGTAGGTTCATCAATGTAACAAAT | + |
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Preference number: 5 (lower is better) Translates to: KCITSRVNPNANCGL*VIMMCPCRFINVTN Trigger: ATTTGTTACATTGATGAACCTACATGGACACATCATTATCACCCAAAGTCCACAGTTTGCATTAGGGTTCACTCTCGATGTTATACATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506090.5 ENST00000660022.1 |
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| CDS GCA 72 bp | AGCGCTGGACCCTGGCAGGAGTCGCAGGCTGCCCGCTaGTGGCCCGCGGACCGGCACCCCCTCCCCCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: SAGPWQESQAAR*WPADRHPLPQS Trigger: GCTTTGGGGGAGGGGGTGCCGGTCCGCGGGCCAGCAGCGGGCAGCCTGCGACTCCTGCCAGGGTCCAGCGCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000506090.5 |
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| CDS CCA 72 bp | GGGCCTGCTATGACCAGCCCGGGGAGGGGACGGGACTaGCTCTGGTGTCTCTTCTGGTCCGGGCACAACTGG | + |
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Preference number: 6 (lower is better) Translates to: GPAMTSPGRGRD*LWCLFWSGHNW Trigger: CCAGTTGTGCCCGGACCAGAAGAGACACCAGAGCCAGTCCCGTCCCCTCCCCGGGCTGGTCATAGCAGGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506090.5 |
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| CDS CCA 72 bp | GGCCCTGCTATGACCAGCCCGGGGAGGGGACGGGACTaGCTCTGGTGTCTCTTCTGGTCCGGGCACAACTGG | + |
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Preference number: 6 (lower is better) Translates to: GPAMTSPGRGRD*LWCLFWSGHNW Trigger: CCAGTTGTGCCCGGACCAGAAGAGACACCAGAGCCAGTCCCGTCCCCTCCCCGGGCTGGTCATAGCAGGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660890.1 |
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| CDS CCA 72 bp | TCAGCACTAATGACGGACTCTACCCCAGCGGAGCGCTaGACCCTGGCAGGAGTCGCAGGCTGCCCGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SALMTDSTPAER*TLAGVAGCPLL Trigger: CAGCAGCGGGCAGCCTGCGACTCCTGCCAGGGTCCAGCGCTCCGCTGGGGTAGAGTCCGTCATTAGTGCTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506090.5 ENST00000660890.1 |
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| CDS GCA 72 bp | GAGCAAGTGGTCTTCCTCCCTAGCCGCGGCGACCCATaGCAGGTAAAAATCCCAGCCGAGGTCCCCGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: EQVVFLPSRGDP*QVKIPAEVPGP Trigger: GGGACCGGGGACCTCGGCTGGGATTTTTACCTGGCATGGGTCGCCGCGGCTAGGGAGGAAGACCACTTGCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000560368.1 |
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| CDS CCA 72 bp | GCTATGACCAGCCCGGGGAGGGGACGGGACTGGCTCTaGTGTCTCTTCTGGTCCGGGCACAACTGGATTCAG | + |
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Preference number: 6 (lower is better) Translates to: AMTSPGRGRDWL*CLFWSGHNWIQ Trigger: CTGAATCCAGTTGTGCCCGGACCAGAAGAGACACCAGAGCCAGTCCCGTCCCCTCCCCGGGCTGGTCATAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000506090.5 ENST00000660890.1 |
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| CDS CCA 72 bp | GAGCTGATATTCGGGAAGCTAAGCCTGAGGCTGCTCTaGAGGGCCGGAGAAGCGAGCGGCCAGGCTTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: ELIFGKLSLRLL*RAGEASGQAWH Trigger: GTGCCAAGCCTGGCCGCTCGCTTCTCCGGCCCTCCAGAGCAGCCTCAGGCTTAGCTTCCCGAATATCAGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560368.1 |
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| CDS GCA 72 bp | TCTCAAGGCTGCTTTGAAGCCTCAGTTTGTCGTGTGTaGAGGCGAGGACCCGGGCAGGTGGGTGAGTCCCGC | + |
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Preference number: 6 (lower is better) Translates to: SQGCFEASVCRV*RRGPGQVGESR Trigger: GCGGGACTCACCCACCTGCCCGGGTCCTCGCCTGCACACACGACAAACTGAGGCTTCAAAGCAGCCTTGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660890.1 |
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| CDS CCA 72 bp | GGTCCCGTCCCCTCCTCCAGGTCAAGGGCTCGGGACTaGAGAAGCAGCCAACTGGAGCTGATATTCGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: GPVPSSRSRARD*RSSQLELIFGK Trigger: CTTCCCGAATATCAGCTCCAGTTGGCTGCTTCTCCAGTCCCGAGCCCTTGACCTGGAGGAGGGGACGGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560368.1 |
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| CDS CAA 72 bp | CTGCCTGTGTTGGCTGGATGTGGGCAGCACAGATATTaGTGTGTCCGTCCAGGGTTGGGCCGGCAGCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: LPVLAGCGQHRY*CVRPGLGRQLG Trigger: ACCCAGCTGCCGGCCCAACCCTGGACGGACACACAAATATCTGTGCTGCCCACATCCAGCCAACACAGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560368.1 |
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| CDS CAA 72 bp | CTGCCTGTGTTGGCTGGATGTGGGCAGCACAGATATTaGTGTGTCCGTCCAGGGTTGGGCCTGCAGGGAACC | + |
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Preference number: 6 (lower is better) Translates to: LPVLAGCGQHRY*CVRPGLGLQGT Trigger: GGTTCCCTGCAGGCCCAACCCTGGACGGACACACAAATATCTGTGCTGCCCACATCCAGCCAACACAGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660022.1 |
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| CDS TCA 72 bp | TGTGCTCTGCTCCAGCATGCGTCGGTCGAGAGTGAGTaGGAATACGTCTGTGAGCGGTCAGGTGAACCGGGT | + |
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Preference number: 6 (lower is better) Translates to: CALLQHASVESE*EYVCERSGEPG Trigger: ACCCGGTTCACCTGACCGCTCACAGACGTATTCTCACTCACTCTCGACCGACGCATGCTGGAGCAGAGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660890.1 |
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| CDS CAA 90 bp | AATATCCTGCTGCCTGTGTTGGCTGGATGTGGGCAGCACAGATATTaGTGTGTCCGTCCAGGGTTGGGCCTGCAGGGAACCAACCGGAGA | + |
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Preference number: 6 (lower is better) Translates to: NILLPVLAGCGQHRY*CVRPGLGLQGTNRR Trigger: TCTCCGGTTGGTTCCCTGCAGGCCCAACCCTGGACGGACACACAAATATCTGTGCTGCCCACATCCAGCCAACACAGGCAGCAGGATATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660022.1 |
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| CDS CCA 72 bp | GTGTCCGTCCAGGGTTGGGCATTTTTGTGTCCTGTCTaGTTCGTTGGTCACCAGTTTGCGCCCCCTAGATGC | + |
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Preference number: 6 (lower is better) Translates to: VSVQGWAFLCPV*FVGHQFAPPRC Trigger: GCATCTAGGGGGCGCAAACTGGTGACCAACGAACCAGACAGGACACAAAAATGCCCAACCCTGGACGGACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000558835.1 |
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| CDS CAA 90 bp | GTGTGTCCGTCCAGGGTTGGGCATTTTTGTGTCCTGTCTGGTTCGTaGGTCACCAGTTTGCGCCCCCTAGATGCGCACTGGATCAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: VCPSRVGHFCVLSGS*VTSLRPLDAHWISS Trigger: ACTACTGATCCAGTGCGCATCTAGGGGGCGCAAACTGGTGACCAACGAACCAGACAGGACACAAAAATGCCCAACCCTGGACGGACACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000558835.1 |
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| CDS CAA 90 bp | GGATCAGTAGTGGGTTTGTCATGTTCTGAAGCTCTCAAGGCTGCTTaGAAGCCTCAGTTTGTCGTGTGTGCAGGCGAGGACCCGGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GSVVGLSCSEALKAA*KPQFVVCAGEDPGR Trigger: CCTGCCCGGGTCCTCGCCTGCACACACGACAAACTGAGGCTTCAAAGCAGCCTTGAGAGCTTCAGAACATGACAAACCCACTACTGATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660890.1 |
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| CDS CAA 72 bp | AGCCGCTCACAGGCGAGCCTCACAGGGCAGGTCTTCTaGTCCCAGGAATGTCAAGAGCTCGTCTTTATCTTC | + |
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Preference number: 6 (lower is better) Translates to: SRSQASLTGQVF*SQECQELVFIF Trigger: GAAGATAAAGACGAGCTCTTGACATTCCTGGGACAAGAAGACCTGCCCTGTGAGGCTCGCCTGTGAGCGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000506090.5 ENST00000560368.1 ENST00000660022.1 |
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| CDS CAA 90 bp | GTGGGCAGCACAGATATTTGTGTGTCCGTCCAGGGTTGGGCATTTTaGTGTCCTGTCTGGTTCGTTGGTCACCAGTTTGCGCCCCCTAGA | + |
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Preference number: 6 (lower is better) Translates to: VGSTDICVSVQGWAF*CPVWFVGHQFAPPR Trigger: TCTAGGGGGCGCAAACTGGTGACCAACGAACCAGACAGGACACAAAAATGCCCAACCCTGGACGGACACACAAATATCTGTGCTGCCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000558835.1 |
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| CDS GCA 72 bp | CAGCCCTGTGTACACTGGTCAGGGCTTCTCCCTGCATaGAGAATGCCAGCCCCTATTCAAGAGACATGGAAA | + |
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Preference number: 6 (lower is better) Translates to: QPCVHWSGLLPA*RMPAPIQETWK Trigger: TTTCCATGTCTCTTGAATAGGGGCTGGCATTCTGCATGCAGGGAGAAGCCCTGACCAGTGTACACAGGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660890.1 |
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| CDS CAA 72 bp | CATTTTTGTGTCCTGTCTGGTTCGTTGGTCACCAGTTaGCGCCCCCTAGATGCGCACTGGATCAGTAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: HFCVLSGSLVTS*RPLDAHWISSG Trigger: CCCACTACTGATCCAGTGCGCATCTAGGGGGCGCAAACTGGTGACCAACGAACCAGACAGGACACAAAAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000558835.1 ENST00000660890.1 |
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| CDS CAA 72 bp | CTGCCTGTGTTGGCTGGATGTGGGCAGCACAGATATTaGTGTGTCCGTCCAGGGTTGGGCATTTTTGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LPVLAGCGQHRY*CVRPGLGIFVS Trigger: GGACACAAAAATGCCCAACCCTGGACGGACACACAAATATCTGTGCTGCCCACATCCAGCCAACACAGGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000558835.1 |
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| CDS CAA 90 bp | GAGAAGCTGAGCCGCTCACAGGCGAGCCTCACAGGGCAGGTCTTCTaGTCCCAGGAATGTCAAGAGCTCGTCTTTATCTTCTCTCAAATG | + |
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Preference number: 6 (lower is better) Translates to: EKLSRSQASLTGQVF*SQECQELVFIFSQM Trigger: CATTTGAGAGAAGATAAAGACGAGCTCTTGACATTCCTGGGACAAGAAGACCTGCCCTGTGAGGCTCGCCTGTGAGCGGCTCAGCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000506090.5 ENST00000560368.1 ENST00000660022.1 |
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| CDS CAA 90 bp | AGGGTTGGGCATTTTTGTGTCCTGTCTGGTTCGTTGGTCACCAGTTaGCGCCCCCTAGATGCGCACTGGATCAGTAGTGGGTTTGTCATG | + |
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Preference number: 6 (lower is better) Translates to: RVGHFCVLSGSLVTS*RPLDAHWISSGFVM Trigger: CATGACAAACCCACTACTGATCCAGTGCGCATCTAGGGGGCGCAAACTGGTGACCAACGAACCAGACAGGACACAAAAATGCCCAACCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000558835.1 |
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| CDS CCA 72 bp | AGGAGGAAATATCCTGCTGCCTGTGTTGGCTGGATGTaGGCAGCACAGATATTTGTGTGTCCGTCCAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: RRKYPAACVGWM*AAQIFVCPSRV Trigger: AACCCTGGACGGACACACAAATATCTGTGCTGCCCACATCCAGCCAACACAGGCAGCAGGATATTTCCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000506090.5 ENST00000558835.1 ENST00000560368.1 ENST00000660022.1 |
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| CDS CCA 72 bp | CTGACTAGGAGGAAATATCCTGCTGCCTGTGTTGGCTaGATGTGGGCAGCACAGATATTTGTGTGTCCGTCC | + |
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Preference number: 6 (lower is better) Translates to: LTRRKYPAACVG*MWAAQIFVCPS Trigger: GGACGGACACACAAATATCTGTGCTGCCCACATCCAGCCAACACAGGCAGCAGGATATTTCCTCCTAGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000506090.5 ENST00000558835.1 ENST00000560368.1 ENST00000660022.1 |
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| CDS CCA 72 bp | GTGGGCAGCACAGATATTTGTGTGTCCGTCCAGGGTTaGGCATTTTTGTGTCCTGTCTGGTTCGTTGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: VGSTDICVSVQG*AFLCPVWFVGH Trigger: GTGACCAACGAACCAGACAGGACACAAAAATGCCCAACCCTGGACGGACACACAAATATCTGTGCTGCCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000558835.1 |
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| CDS CAA 90 bp | TTGGCTGGATGTGGGCAGCACAGATATTTGTGTGTCCGTCCAGGGTaGGGCATTTTTGTGTCCTGTCTGGTTCGTTGGTCACCAGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: LAGCGQHRYLCVRPG*GIFVSCLVRWSPVC Trigger: GCAAACTGGTGACCAACGAACCAGACAGGACACAAAAATGCCCAACCCTGGACGGACACACAAATATCTGTGCTGCCCACATCCAGCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000558835.1 |
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| CDS CAA 90 bp | AATATCCTGCTGCCTGTGTTGGCTGGATGTGGGCAGCACAGATATTaGTGTGTCCGTCCAGGGTTGGGCATTTTTGTGTCCTGTCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: NILLPVLAGCGQHRY*CVRPGLGIFVSCLV Trigger: AACCAGACAGGACACAAAAATGCCCAACCCTGGACGGACACACAAATATCTGTGCTGCCCACATCCAGCCAACACAGGCAGCAGGATATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000558835.1 |
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| CDS CAA 90 bp | CCTCACAAACATTTTTGTGTCCTGTCTGGTTCGTTGGTCACCAGTTaGCGCCCCCTAGATGCGCACTGGATCAGTAGTGGGTTTGTCATG | + |
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Preference number: 6 (lower is better) Translates to: PHKHFCVLSGSLVTS*RPLDAHWISSGFVM Trigger: CATGACAAACCCACTACTGATCCAGTGCGCATCTAGGGGGCGCAAACTGGTGACCAACGAACCAGACAGGACACAAAAATGTTTGTGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000660890.1 |
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| CDS CAA 90 bp | ATACTGTGGGAGCCTCACAAACATTTTTGTGTCCTGTCTGGTTCGTaGGTCACCAGTTTGCGCCCCCTAGATGCGCACTGGATCAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: ILWEPHKHFCVLSGS*VTSLRPLDAHWISS Trigger: ACTACTGATCCAGTGCGCATCTAGGGGGCGCAAACTGGTGACCAACGAACCAGACAGGACACAAAAATGTTTGTGAGGCTCCCACAGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000660890.1 |
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| CDS CCA 72 bp | AAACCAGGACCTTCTTGCTCCCCCTTCCTGGGCAAGTaGCCTTTATCTACATGGTTTAGAACACCCAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: KPGPSCSPFLGK*PLSTWFRTPSL Trigger: CAGACTGGGTGTTCTAAACCATGTAGATAAAGGCCACTTGCCCAGGAAGGGGGAGCAAGAAGGTCCTGGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000506090.5 ENST00000560368.1 ENST00000660022.1 |
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| CDS CAA 72 bp | TGTGGGCAGCACAGATATTTGTGTGTCCGTCCAGGGTaGGGCATTTTTGTGTCCTGTCTGGTTCGTTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: CGQHRYLCVRPG*GIFVSCLVRWS Trigger: TGACCAACGAACCAGACAGGACACAAAAATGCCCAACCCTGGACGGACACACAAATATCTGTGCTGCCCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000558835.1 |
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| CDS TCA 72 bp | ATGGTAGACTGCCAAAACAGTGATTTATGTTCACGGTaGAACCAGGACCTTCTTGCTCCCCCTTCCTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: MVDCQNSDLCSR*NQDLLAPPSWA Trigger: TGCCCAGGAAGGGGGAGCAAGAAGGTCCTGGTTTCACCGTGAACATAAATCACTGTTTTGGCAGTCTACCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000506090.5 ENST00000560368.1 ENST00000660022.1 |
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| CDS CAA 72 bp | ACAGATATTTGTGTGTCCGTCCAGGGTTGGGCATTTTaGTGTCCTGTCTGGTTCGTTGGTCACCAGTTTGCG | + |
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Preference number: 6 (lower is better) Translates to: TDICVSVQGWAF*CPVWFVGHQFA Trigger: CGCAAACTGGTGACCAACGAACCAGACAGGACACAAAAATGCCCAACCCTGGACGGACACACAAATATCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558835.1 |
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| CDS GCA 72 bp | ACTCTGGTGTACGATGTTGACAATGGGGGAAGGCTGTaGATGTGTTGGAGTAGGGAGTGTAATGGAAACTCT | + |
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Preference number: 6 (lower is better) Translates to: TLVYDVDNGGRL*MCWSRECNGNS Trigger: AGAGTTTCCATTACACTCCCTACTCCAACACATGCACAGCCTTCCCCCATTGTCAACATCGTACACCAGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000506090.5 ENST00000660022.1 |
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| CDS GCA 72 bp | CAACTGTGTGTCCCTGTGTGCATATTTGACATAAATTaGAAACCTCCATTTCACCCCTTGGCCTCCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: QLCVPVCIFDIN*KPPFHPLASCS Trigger: ACTGCAGGAGGCCAAGGGGTGAAATGGAGGTTTGCAATTTATGTCAAATATGCACACAGGGACACACAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506090.5 ENST00000660022.1 |
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| CDS TCA 72 bp | AAGCTGTTTTCAGTTGCTGCCTCTGGCATTTTCCTCTaGAAGGCTAGTCTGATGGATAGTATGGTAGACTGC | + |
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Preference number: 6 (lower is better) Translates to: KLFSVAASGIFL*KASLMDSMVDC Trigger: GCAGTCTACCATACTATCCATCAGACTAGCCTTTCAGAGGAAAATGCCAGAGGCAGCAACTGAAAACAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000506090.5 ENST00000560368.1 ENST00000660022.1 |
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| CDS TCA 72 bp | GACTTCCCCCAGGAAATTGGTTTCTCCCAGTCAAGTTaGAAGGCTGAGATCATCTTAGTAATGACAGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: DFPQEIGFSQSS*KAEIILVMTVR Trigger: CCTCACTGTCATTACTAAGATGATCTCAGCCTTTCAACTTGACTGGGAGAAACCAATTTCCTGGGGGAAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000506090.5 ENST00000660022.1 |
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| CDS TCA 72 bp | AATGCCAGCCCCTATTCAAGAGACATGGAAAGGCCATaGCATGGATATTGTTTTAGAGAGAGGGAGAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: NASPYSRDMERP*HGYCFRERERE Trigger: CTCTCTCTCCCTCTCTCTAAAACAATATCCATGTCATGGCCTTTCCATGTCTCTTGAATAGGGGCTGGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660890.1 |
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| CDS CCA 72 bp | CCTGCATGCAGAATGCCAGCCCCTATTCAAGAGACATaGAAAGGCCATGACATGGATATTGTTTTAGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: PACRMPAPIQET*KGHDMDIVLER Trigger: TCTCTCTAAAACAATATCCATGTCATGGCCTTTCCATGTCTCTTGAATAGGGGCTGGCATTCTGCATGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660890.1 |
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| CDS CCA 72 bp | CCATGTAGGTTCATCAATGTAACAAATGTATCACTCTaGTGTACGATGTTGACAATGGGGGAAGGCTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: PCRFINVTNVSL*CTMLTMGEGCA Trigger: TGCACAGCCTTCCCCCATTGTCAACATCGTACACCAGAGTGATACATTTGTTACATTGATGAACCTACATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000506090.5 ENST00000660022.1 |
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| CDS CAA 72 bp | ATATTTGACATAAATTGCAAACCTCCATTTCACCCCTaGGCCTCCTGCAGTCAAAAACTCATGAGGGTCACT | + |
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Preference number: 6 (lower is better) Translates to: IFDINCKPPFHP*ASCSQKLMRVT Trigger: AGTGACCCTCATGAGTTTTTGACTGCAGGAGGCCAAGGGGTGAAATGGAGGTTTGCAATTTATGTCAAATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000506090.5 ENST00000660022.1 |
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| CDS CCA 72 bp | ACATCGAGAGTGAACCCTAATGCAAACTGTGGACTTTaGGTGATAATGATGTGTCCATGTAGGTTCATCAAT | + |
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Preference number: 6 (lower is better) Translates to: TSRVNPNANCGL*VIMMCPCRFIN Trigger: ATTGATGAACCTACATGGACACATCATTATCACCCAAAGTCCACAGTTTGCATTAGGGTTCACTCTCGATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506090.5 ENST00000660022.1 |
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| CDS CAA 72 bp | CAAATTTACTGTACATCTACTGCTAATTCTGAATTGTaGAATGGGGGTACTGTCAGGATAGTCACAGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: QIYCTSTANSEL*NGGTVRIVTAG Trigger: TCCTGCTGTGACTATCCTGACAGTACCCCCATTCAACAATTCAGAATTAGCAGTAGATGTACAGTAAATTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000506090.5 ENST00000660022.1 |
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| CDS TCA 72 bp | GCTCGTCTTTATCTTCTCTCAAATGATTTGCTTCAGTaGCTAACTGATGACTCCTACAAGCTGTTTTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: ARLYLLSNDLLQ*LTDDSYKLFSV Trigger: AACTGAAAACAGCTTGTAGGAGTCATCAGTTAGTCACTGAAGCAAATCATTTGAGAGAAGATAAAGACGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000506090.5 ENST00000560368.1 ENST00000660022.1 |
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| CDS CAA 72 bp | AAACAAATTTACTGTACATCTACTGCTAATTCTGAATaGTTGAATGGGGGTACTGTCAGGATAGTCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: KQIYCTSTANSE*LNGGTVRIVTA Trigger: TGCTGTGACTATCCTGACAGTACCCCCATTCAACAATTCAGAATTAGCAGTAGATGTACAGTAAATTTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000506090.5 ENST00000660022.1 |
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| CDS TCA 72 bp | ATTTTTAAGGCCAAGAAACTACTCTGTAGGGTACTATaGTGGTGGATATATGCCACTATACATTTGTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: IFKAKKLLCRVL*WWIYATIHLSK Trigger: TTTGGACAAATGTATAGTGGCATATATCCACCATCATAGTACCCTACAGAGTAGTTTCTTGGCCTTAAAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000506090.5 ENST00000660022.1 |
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