Pregenerated sensors for LINC01585 (Homo sapiens)
Ensembl gene IDs: ENSG00000245479Ensembl transcript IDs: ENST00000500496.3, ENST00000559473.1, ENST00000658128.1, ENST00000661163.1
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAGGCTAGAAAAGCTGAGACCACAGTCAGCTGGGCTGCAGATCTTTaGTCCGCCTTCCTCCAGACAGCACAAGTGACTCAGCCCTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: EARKAETTVSWAADL*SAFLQTAQVTQPSP Trigger: TGGGGAGGGCTGAGTCACTTGTGCTGTCTGGAGGAAGGCGGAGCAAAGATCTGCAGCCCAGCTGACTGTGGTCTCAGCTTTTCTAGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000500496.3 ENST00000658128.1 ENST00000661163.1 |
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| CDS CCA 90 bp | CCGGGAGAAAGCCTGGAGGCTAGAAAAGCTGAGACCACAGTCAGCTaGGCTGCAGATCTTTGCTCCGCCTTCCTCCAGACAGCACAAGTG | + |
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Preference number: 5 (lower is better) Translates to: PGESLEARKAETTVS*AADLCSAFLQTAQV Trigger: CACTTGTGCTGTCTGGAGGAAGGCGGAGCAAAGATCTGCAGCCCAGCTGACTGTGGTCTCAGCTTTTCTAGCCTCCAGGCTTTCTCCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000500496.3 ENST00000658128.1 ENST00000661163.1 |
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| CDS TCA 90 bp | ACAGCACAAGTGACTCAGCCCTCCCCAGGGTGCTGCTTCTCGCTCTaGCACCACGATTTGGCCTCCTCTCACTCACAACTCTATCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: TAQVTQPSPGCCFSL*HHDLASSHSQLYLL Trigger: GAGGAGATAGAGTTGTGAGTGAGAGGAGGCCAAATCGTGGTGTCAGAGCGAGAAGCAGCACCCTGGGGAGGGCTGAGTCACTTGTGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000500496.3 ENST00000658128.1 ENST00000661163.1 |
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| CDS TCA 90 bp | GCTCCTTTCAGACCCATGTCACCCCAAGTCATGGGGCATTTCCAGTaGGCACATACAGACTTAGGAACCCGGGAGAAAGCCTGGAGGCTA | + |
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Preference number: 5 (lower is better) Translates to: APFRPMSPQVMGHFQ*AHTDLGTREKAWRL Trigger: TAGCCTCCAGGCTTTCTCCCGGGTTCCTAAGTCTGTATGTGCTCACTGGAAATGCCCCATGACTTGGGGTGACATGGGTCTGAAAGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000500496.3 |
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| CDS TCA 90 bp | GGGTCCCTTAGTCTCTGCATTTCACCGAAGGTCGGAGATTTTCCTTaGTTGTCTTTTCCCGTGGCCAACATCAGGGCTGGTGGCTTTAAG | + |
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Preference number: 5 (lower is better) Translates to: GSLSLCISPKVGDFP*LSFPVANIRAGGFK Trigger: CTTAAAGCCACCAGCCCTGATGTTGGCCACGGGAAAAGACAATCAAGGAAAATCTCCGACCTTCGGTGAAATGCAGAGACTAAGGGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000500496.3 ENST00000559473.1 ENST00000658128.1 ENST00000661163.1 |
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| CDS CCA 90 bp | CTCATGAAGTTGTCAGCATGTCAGAGTTGGAACCATTTGAAAGCTTaGCTGGGGCTGGAGGATCCTCTTTCAAGGTGTCTCATTCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: LMKLSACQSWNHLKA*LGLEDPLSRCLIHK Trigger: CTTGTGAATGAGACACCTTGAAAGAGGATCCTCCAGCCCCAGCCAAGCTTTCAAATGGTTCCAACTCTGACATGCTGACAACTTCATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000500496.3 ENST00000658128.1 ENST00000661163.1 |
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| CDS CCA 90 bp | CATTTGTTACATAACACACTAATGGGTCAGGAGTTTGGGTGGTTCTaGCTCAGGGCCTCTCATGAAGTTGTCAGCATGTCAGAGTTGGAA | + |
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Preference number: 5 (lower is better) Translates to: HLLHNTLMGQEFGWF*LRASHEVVSMSELE Trigger: TTCCAACTCTGACATGCTGACAACTTCATGAGAGGCCCTGAGCCAGAACCACCCAAACTCCTGACCCATTAGTGTGTTATGTAACAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000500496.3 ENST00000658128.1 ENST00000661163.1 |
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| CDS TCA 90 bp | GGAACAATGGCTAGAGGTAGCAAATTGCCCCAAAACTTAGTGGCATaGAACAACAAACATTTGTTACATAACACACTAATGGGTCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: GTMARGSKLPQNLVA*NNKHLLHNTLMGQE Trigger: CTCCTGACCCATTAGTGTGTTATGTAACAAATGTTTGTTGTTTCATGCCACTAAGTTTTGGGGCAATTTGCTACCTCTAGCCATTGTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000500496.3 ENST00000658128.1 ENST00000661163.1 |
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| CDS TCA 72 bp | GCCTCCCCAGTGTGTGGGCCTCTCCATAGGGCTGCTTaGGTATCTTCACAACATGGTGGCTGGCTTCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: ASPVCGPLHRAA*VSSQHGGWLPQ Trigger: CTGGGGAAGCCAGCCACCATGTTGTGAAGATACTCAAGCAGCCCTATGGAGAGGCCCACACACTGGGGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000500496.3 |
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| CDS TCA 72 bp | GTGACTCAGCCCTCCCCAGGGTGCTGCTTCTCGCTCTaGCACCACGATTTGGCCTCCTCTCACTCACAACTC | + |
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Preference number: 6 (lower is better) Translates to: VTQPSPGCCFSL*HHDLASSHSQL Trigger: GAGTTGTGAGTGAGAGGAGGCCAAATCGTGGTGTCAGAGCGAGAAGCAGCACCCTGGGGAGGGCTGAGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000500496.3 ENST00000658128.1 ENST00000661163.1 |
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| CDS CCA 72 bp | AGCCTGGAGGCTAGAAAAGCTGAGACCACAGTCAGCTaGGCTGCAGATCTTTGCTCCGCCTTCCTCCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: SLEARKAETTVS*AADLCSAFLQT Trigger: TGTCTGGAGGAAGGCGGAGCAAAGATCTGCAGCCCAGCTGACTGTGGTCTCAGCTTTTCTAGCCTCCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000500496.3 ENST00000658128.1 ENST00000661163.1 |
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| CDS GCA 72 bp | AAAGCTGAGACCACAGTCAGCTGGGCTGCAGATCTTTaGTCCGCCTTCCTCCAGACAGCACAAGTGACTCAG | + |
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Preference number: 6 (lower is better) Translates to: KAETTVSWAADL*SAFLQTAQVTQ Trigger: CTGAGTCACTTGTGCTGTCTGGAGGAAGGCGGAGCAAAGATCTGCAGCCCAGCTGACTGTGGTCTCAGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000500496.3 ENST00000658128.1 ENST00000661163.1 |
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| CDS TCA 72 bp | AGACCCATGTCACCCCAAGTCATGGGGCATTTCCAGTaGGCACATACAGACTTAGGAACCCGGGAGAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: RPMSPQVMGHFQ*AHTDLGTREKA Trigger: GGCTTTCTCCCGGGTTCCTAAGTCTGTATGTGCTCACTGGAAATGCCCCATGACTTGGGGTGACATGGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000500496.3 |
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| CDS TCA 72 bp | TCACCCATGTCACCCCAAGTCATGGGGCATTTCCAGTaGGCACATACAGACTTAGGAACCCGGGAGAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: SPMSPQVMGHFQ*AHTDLGTREKA Trigger: GGCTTTCTCCCGGGTTCCTAAGTCTGTATGTGCTCACTGGAAATGCCCCATGACTTGGGGTGACATGGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661163.1 |
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| CDS CAA 90 bp | TGGGTCAGGAGTTTGGGTGGTTCTGGCTCAGGGCCTCTCATGAAGTaGTCAGCATGTCAGAGTTGGAACCATTTGAAAGCTTGGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: WVRSLGGSGSGPLMK*SACQSWNHLKAWLG Trigger: CCCCAGCCAAGCTTTCAAATGGTTCCAACTCTGACATGCTGACAACTTCATGAGAGGCCCTGAGCCAGAACCACCCAAACTCCTGACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000500496.3 ENST00000658128.1 ENST00000661163.1 |
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| CDS CAA 72 bp | CTCAGGGCCTCTCATGAAGTTGTCAGCATGTCAGAGTaGGAACCATTTGAAAGCTTGGCTGGGGCTGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: LRASHEVVSMSE*EPFESLAGAGG Trigger: TCCTCCAGCCCCAGCCAAGCTTTCAAATGGTTCCAACTCTGACATGCTGACAACTTCATGAGAGGCCCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000500496.3 ENST00000658128.1 ENST00000661163.1 |
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| CDS CCA 72 bp | TCAGGGCCTCTCATGAAGTTGTCAGCATGTCAGAGTTaGAACCATTTGAAAGCTTGGCTGGGGCTGGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: SGPLMKLSACQS*NHLKAWLGLED Trigger: ATCCTCCAGCCCCAGCCAAGCTTTCAAATGGTTCCAACTCTGACATGCTGACAACTTCATGAGAGGCCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000500496.3 ENST00000658128.1 ENST00000661163.1 |
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| CDS CCA 72 bp | CGAAGGTCGGAGATTTTCCTTGATTGTCTTTTCCCGTaGCCAACATCAGGGCTGGTGGCTTTAAGAGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: RRSEIFLDCLFP*PTSGLVALRVL Trigger: CAGGACTCTTAAAGCCACCAGCCCTGATGTTGGCCACGGGAAAAGACAATCAAGGAAAATCTCCGACCTTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000500496.3 ENST00000559473.1 ENST00000658128.1 ENST00000661163.1 |
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| CDS TCA 72 bp | AGTCTCTGCATTTCACCGAAGGTCGGAGATTTTCCTTaGTTGTCTTTTCCCGTGGCCAACATCAGGGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SLCISPKVGDFP*LSFPVANIRAG Trigger: ACCAGCCCTGATGTTGGCCACGGGAAAAGACAATCAAGGAAAATCTCCGACCTTCGGTGAAATGCAGAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000500496.3 ENST00000559473.1 ENST00000658128.1 ENST00000661163.1 |
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| CDS CCA 72 bp | TTGTCAGCATGTCAGAGTTGGAACCATTTGAAAGCTTaGCTGGGGCTGGAGGATCCTCTTTCAAGGTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: LSACQSWNHLKA*LGLEDPLSRCL Trigger: GAGACACCTTGAAAGAGGATCCTCCAGCCCCAGCCAAGCTTTCAAATGGTTCCAACTCTGACATGCTGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000500496.3 ENST00000658128.1 ENST00000661163.1 |
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| CDS CCA 72 bp | CATAACACACTAATGGGTCAGGAGTTTGGGTGGTTCTaGCTCAGGGCCTCTCATGAAGTTGTCAGCATGTCA | + |
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Preference number: 6 (lower is better) Translates to: HNTLMGQEFGWF*LRASHEVVSMS Trigger: TGACATGCTGACAACTTCATGAGAGGCCCTGAGCCAGAACCACCCAAACTCCTGACCCATTAGTGTGTTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000500496.3 ENST00000658128.1 ENST00000661163.1 |
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| CDS CAA 72 bp | CTCATGAAGTTGTCAGCATGTCAGAGTTGGAACCATTaGAAAGCTTGGCTGGGGCTGGAGGATCCTCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: LMKLSACQSWNH*KAWLGLEDPLS Trigger: TGAAAGAGGATCCTCCAGCCCCAGCCAAGCTTTCAAATGGTTCCAACTCTGACATGCTGACAACTTCATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000500496.3 ENST00000658128.1 ENST00000661163.1 |
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| CDS CAA 72 bp | AGTTTGGGTGGTTCTGGCTCAGGGCCTCTCATGAAGTaGTCAGCATGTCAGAGTTGGAACCATTTGAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: SLGGSGSGPLMK*SACQSWNHLKA Trigger: AGCTTTCAAATGGTTCCAACTCTGACATGCTGACAACTTCATGAGAGGCCCTGAGCCAGAACCACCCAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000500496.3 ENST00000658128.1 ENST00000661163.1 |
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