Pregenerated sensors for LINC01582 (Homo sapiens)
Ensembl gene IDs: ENSG00000259611Ensembl transcript IDs: ENST00000560195.2, ENST00000561215.2, ENST00000660065.1, ENST00000660778.1, ENST00000661781.1, ENST00000664520.1, ENST00000665630.1, ENST00000665807.1, ENST00000670234.1, ENST00000670525.1, ENST00000671201.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTTGAGGCTCCAGAGGCAGGCTACACAAGGAGCTCCTTGCTGGCATaGCTCCAAACGGTATCCACCAGCGCCTGCTCCGATTCACGCCAA | + |
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Preference number: 5 (lower is better) Translates to: LEAPEAGYTRSSLLA*LQTVSTSACSDSRQ Trigger: TTGGCGTGAATCGGAGCAGGCGCTGGTGGATACCGTTTGGAGGCATGCCAGCAAGGAGCTCCTTGTGTAGCCTGCCTCTGGAGCCTCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS CCA 90 bp | CCTGGGGTCTCAGAGTGGACATCATTCACAGGGCAGTCAAGGGGATaGCAAAGGGATGGCCACCAGGCAGCCAATCCTAGGAGACATGGG | + |
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Preference number: 5 (lower is better) Translates to: PGVSEWTSFTGQSRG*QRDGHQAANPRRHG Trigger: CCCATGTCTCCTAGGATTGGCTGCCTGGTGGCCATCCCTTTGCCATCCCCTTGACTGCCCTGTGAATGATGTCCACTCTGAGACCCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000660778.1 ENST00000661781.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 |
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| CDS GCA 90 bp | AGGAGCTCCTTGCTGGCATGCCTCCAAACGGTATCCACCAGCGCCTaGTCCGATTCACGCCAAGGTGACATGCACACATTTGAGCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: RSSLLACLQTVSTSA*SDSRQGDMHTFELV Trigger: CACCAGCTCAAATGTGTGCATGTCACCTTGGCGTGAATCGGAGCAGGCGCTGGTGGATACCGTTTGGAGGCATGCCAGCAAGGAGCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS CCA 90 bp | TTGAACTTGAGGCTCCAGAGGCAGGCTACACAAGGAGCTCCTTGCTaGCATGCCTCCAAACGGTATCCACCAGCGCCTGCTCCGATTCAC | + |
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Preference number: 5 (lower is better) Translates to: LNLRLQRQATQGAPC*HASKRYPPAPAPIH Trigger: GTGAATCGGAGCAGGCGCTGGTGGATACCGTTTGGAGGCATGCCAGCAAGGAGCTCCTTGTGTAGCCTGCCTCTGGAGCCTCAAGTTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS CCA 90 bp | GGTTCTCAGGAGCTTCTGCCCAGCCCGACTCCCCTTTTGGCCCTATaGAAGTTGAACTTGAGGCTCCAGAGGCAGGCTACACAAGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: GSQELLPSPTPLLAL*KLNLRLQRQATQGA Trigger: AGCTCCTTGTGTAGCCTGCCTCTGGAGCCTCAAGTTCAACTTCCATAGGGCCAAAAGGGGAGTCGGGCTGGGCAGAAGCTCCTGAGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS GCA 90 bp | AAGTTGAACTTGAGGCTCCAGAGGCAGGCTACACAAGGAGCTCCTTaGTGGCATGCCTCCAAACGGTATCCACCAGCGCCTGCTCCGATT | + |
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Preference number: 5 (lower is better) Translates to: KLNLRLQRQATQGAP*WHASKRYPPAPAPI Trigger: AATCGGAGCAGGCGCTGGTGGATACCGTTTGGAGGCATGCCAGCAAGGAGCTCCTTGTGTAGCCTGCCTCTGGAGCCTCAAGTTCAACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS TCA 90 bp | CAACGGCCAGGCCAAGGAGAGTCCAGGAATGCCACCTGCTTCCCATaGGAAAGGAATTTCTCACATGACACAGGGAAAGAGTATGCCCCC | + |
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Preference number: 5 (lower is better) Translates to: QRPGQGESRNATCFP*ERNFSHDTGKEYAP Trigger: GGGGGCATACTCTTTCCCTGTGTCATGTGAGAAATTCCTTTCTCATGGGAAGCAGGTGGCATTCCTGGACTCTCCTTGGCCTGGCCGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000660778.1 ENST00000661781.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 |
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| CDS CCA 90 bp | ACACGTTACCTCCACTACACTCTCAGACTCTCAGACCATTTGCTTTaGTTCTCAGGAGCTTCTGCCCAGCCCGACTCCCCTTTTGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: TRYLHYTLRLSDHLL*FSGASAQPDSPFGP Trigger: AGGGCCAAAAGGGGAGTCGGGCTGGGCAGAAGCTCCTGAGAACCAAAGCAAATGGTCTGAGAGTCTGAGAGTGTAGTGGAGGTAACGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS TCA 90 bp | CTGAGCAAGCTCCAGTTCTGCCAAGTAGTCGCCACTCTATATCCCTaGCTCTGGGCCACTGTAGAGTATTCTTGTTACCGGCCAGGACTC | + |
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Preference number: 5 (lower is better) Translates to: LSKLQFCQVVATLYP*LWATVEYSCYRPGL Trigger: GAGTCCTGGCCGGTAACAAGAATACTCTACAGTGGCCCAGAGTCAGGGATATAGAGTGGCGACTACTTGGCAGAACTGGAGCTTGCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS GCA 90 bp | CACGAACACGTTACCTCCACTACACTCTCAGACTCTCAGACCATTTaGTTTGGTTCTCAGGAGCTTCTGCCCAGCCCGACTCCCCTTTTG | + |
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Preference number: 5 (lower is better) Translates to: HEHVTSTTLSDSQTI*FGSQELLPSPTPLL Trigger: CAAAAGGGGAGTCGGGCTGGGCAGAAGCTCCTGAGAACCAAAGCAAATGGTCTGAGAGTCTGAGAGTGTAGTGGAGGTAACGTGTTCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS GCA 90 bp | TTACAGCCCACCTTTGACAAGAGATTCAGACACCTTGAATTCCTGTaGTTACCAACGGCCAGGCCAAGGAGAGTCCAGGAATGCCACCTG | + |
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Preference number: 5 (lower is better) Translates to: LQPTFDKRFRHLEFL*LPTARPRRVQECHL Trigger: CAGGTGGCATTCCTGGACTCTCCTTGGCCTGGCCGTTGGTAAGCACAGGAATTCAAGGTGTCTGAATCTCTTGTCAAAGGTGGGCTGTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000660778.1 ENST00000661781.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 |
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| CDS CCA 90 bp | CATATTGGGGTACCCTTGCTCATCTATGAGCCCAAAGGCCCAACATaGCTGAACTTTGCTTCCCAGTCTTTGAACTCTGCCAAAACCTGT | + |
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Preference number: 5 (lower is better) Translates to: HIGVPLLIYEPKGPT*LNFASQSLNSAKTC Trigger: ACAGGTTTTGGCAGAGTTCAAAGACTGGGAAGCAAAGTTCAGCCATGTTGGGCCTTTGGGCTCATAGATGAGCAAGGGTACCCCAATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000561215.2 ENST00000665807.1 |
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| CDS CCA 90 bp | CATATTGGGGTACCCTTGCTCATCTATGAGCCCAAAGGCCCAACATaGCTGAACTTTGCTTCCCAGTCTTTGAACTCTGCCAAAACCTTC | + |
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Preference number: 5 (lower is better) Translates to: HIGVPLLIYEPKGPT*LNFASQSLNSAKTF Trigger: GAAGGTTTTGGCAGAGTTCAAAGACTGGGAAGCAAAGTTCAGCCATGTTGGGCCTTTGGGCTCATAGATGAGCAAGGGTACCCCAATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661781.1 |
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| CDS CCA 90 bp | CATATTGGGGTACCCTTGCTCATCTATGAGCCCAAAGGCCCAACATaGCTGAACTTTGCTTCCCAGTCTTTGAACTCTGCCAAAACCACT | + |
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Preference number: 5 (lower is better) Translates to: HIGVPLLIYEPKGPT*LNFASQSLNSAKTT Trigger: AGTGGTTTTGGCAGAGTTCAAAGACTGGGAAGCAAAGTTCAGCCATGTTGGGCCTTTGGGCTCATAGATGAGCAAGGGTACCCCAATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665630.1 |
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| CDS CCA 90 bp | CATATTGGGGTACCCTTGCTCATCTATGAGCCCAAAGGCCCAACATaGCTGAACTTTGCTTCCCAGTCTTTGAACTCTGCCAAAACCCAA | + |
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Preference number: 5 (lower is better) Translates to: HIGVPLLIYEPKGPT*LNFASQSLNSAKTQ Trigger: TTGGGTTTTGGCAGAGTTCAAAGACTGGGAAGCAAAGTTCAGCCATGTTGGGCCTTTGGGCTCATAGATGAGCAAGGGTACCCCAATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670234.1 |
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| CDS GCA 90 bp | TCTATTGTCTTCATGAAACTAGATGCTGGGGAGACACCTGATCACTaGTCTCTTGCCTCATTTGGGGCAAATAAGCACGACACCACACAC | + |
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Preference number: 5 (lower is better) Translates to: SIVFMKLDAGETPDH*SLASFGANKHDTTH Trigger: GTGTGTGGTGTCGTGCTTATTTGCCCCAAATGAGGCAAGAGAGCAGTGATCAGGTGTCTCCCCAGCATCTAGTTTCATGAAGACAATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000660778.1 ENST00000661781.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 |
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| CDS CCA 90 bp | AGAAAGTCCCTGCTAGTATTCCTATGTCCGGAATTGGTGGGTTCTTaGTCTGACTTCAAGAATGAAGCCGCGGACTGTCGCAGTGAATAT | + |
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Preference number: 5 (lower is better) Translates to: RKSLLVFLCPELVGS*SDFKNEAADCRSEY Trigger: ATATTCACTGCGACAGTCCGCGGCTTCATTCTTGAAGTCAGACCAAGAACCCACCAATTCCGGACATAGGAATACTAGCAGGGACTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560195.2 ENST00000660778.1 |
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| CDS CCA 90 bp | CATATTGGGGTACCCTTGCTCATCTATGAGCCCAAAGGCCCAACATaGCTGAACTTTGCTTCCCAGTCTTTGAACTCTGCCAAAACCTTT | + |
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Preference number: 5 (lower is better) Translates to: HIGVPLLIYEPKGPT*LNFASQSLNSAKTF Trigger: AAAGGTTTTGGCAGAGTTCAAAGACTGGGAAGCAAAGTTCAGCCATGTTGGGCCTTTGGGCTCATAGATGAGCAAGGGTACCCCAATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000560195.2 ENST00000660778.1 |
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| CDS CCA 90 bp | CATATTGGGGTACCCTTGCTCATCTATGAGCCCAAAGGCCCAACATaGCTGAACTTTGCTTCCCAGTCTTTGAACTCTGCCAAAACCATA | + |
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Preference number: 5 (lower is better) Translates to: HIGVPLLIYEPKGPT*LNFASQSLNSAKTI Trigger: TATGGTTTTGGCAGAGTTCAAAGACTGGGAAGCAAAGTTCAGCCATGTTGGGCCTTTGGGCTCATAGATGAGCAAGGGTACCCCAATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000664520.1 ENST00000670525.1 |
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| CDS GCA 90 bp | TTAATTCACAAATTGCATTACTATTCTGAAAGAGGATCCTCCAACTaGAGAACATCAAAGCTCCCCCACCACCAGGACCTGCCCCCTAAC | + |
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Preference number: 5 (lower is better) Translates to: LIHKLHYYSERGSSN*RTSKLPHHQDLPPN Trigger: GTTAGGGGGCAGGTCCTGGTGGTGGGGGAGCTTTGATGTTCTGCAGTTGGAGGATCCTCTTTCAGAATAGTAATGCAATTTGTGAATTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000660778.1 ENST00000661781.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 |
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| CDS TCA 90 bp | GAACTCTGCCAAAACCATAAACCACGGAGGCCAGAAGATACTGGATaGCATATTCAAAGAGCTGACCAATGTCAACAAAGAATTCTATGT | + |
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Preference number: 5 (lower is better) Translates to: ELCQNHKPRRPEDTG*HIQRADQCQQRILC Trigger: ACATAGAATTCTTTGTTGACATTGGTCAGCTCTTTGAATATGTCATCCAGTATCTTCTGGCCTCCGTGGTTTATGGTTTTGGCAGAGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000664520.1 ENST00000670525.1 |
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| CDS GCA 72 bp | CCAGAGGCAGGCTACACAAGGAGCTCCTTGCTGGCATaGCTCCAAACGGTATCCACCAGCGCCTGCTCCGAT | + |
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Preference number: 6 (lower is better) Translates to: PEAGYTRSSLLA*LQTVSTSACSD Trigger: ATCGGAGCAGGCGCTGGTGGATACCGTTTGGAGGCATGCCAGCAAGGAGCTCCTTGTGTAGCCTGCCTCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS CCA 72 bp | AGGCTCCAGAGGCAGGCTACACAAGGAGCTCCTTGCTaGCATGCCTCCAAACGGTATCCACCAGCGCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: RLQRQATQGAPC*HASKRYPPAPA Trigger: AGCAGGCGCTGGTGGATACCGTTTGGAGGCATGCCAGCAAGGAGCTCCTTGTGTAGCCTGCCTCTGGAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS CAA 72 bp | CTTGAGGCTCCAGAGGCAGGCTACACAAGGAGCTCCTaGCTGGCATGCCTCCAAACGGTATCCACCAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: LEAPEAGYTRSS*LACLQTVSTSA Trigger: GGCGCTGGTGGATACCGTTTGGAGGCATGCCAGCAAGGAGCTCCTTGTGTAGCCTGCCTCTGGAGCCTCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS GCA 72 bp | TTGAGGCTCCAGAGGCAGGCTACACAAGGAGCTCCTTaGTGGCATGCCTCCAAACGGTATCCACCAGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: LRLQRQATQGAP*WHASKRYPPAP Trigger: AGGCGCTGGTGGATACCGTTTGGAGGCATGCCAGCAAGGAGCTCCTTGTGTAGCCTGCCTCTGGAGCCTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS CAA 90 bp | GAAGTTGAACTTGAGGCTCCAGAGGCAGGCTACACAAGGAGCTCCTaGCTGGCATGCCTCCAAACGGTATCCACCAGCGCCTGCTCCGAT | + |
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Preference number: 6 (lower is better) Translates to: EVELEAPEAGYTRSS*LACLQTVSTSACSD Trigger: ATCGGAGCAGGCGCTGGTGGATACCGTTTGGAGGCATGCCAGCAAGGAGCTCCTTGTGTAGCCTGCCTCTGGAGCCTCAAGTTCAACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS CAA 90 bp | CTTCTGCCCAGCCCGACTCCCCTTTTGGCCCTATGGAAGTTGAACTaGAGGCTCCAGAGGCAGGCTACACAAGGAGCTCCTTGCTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: LLPSPTPLLALWKLN*RLQRQATQGAPCWH Trigger: ATGCCAGCAAGGAGCTCCTTGTGTAGCCTGCCTCTGGAGCCTCAAGTTCAACTTCCATAGGGCCAAAAGGGGAGTCGGGCTGGGCAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS CAA 72 bp | GGTTCTCAGGAGCTTCTGCCCAGCCCGACTCCCCTTTaGGCCCTATGGAAGTTGAACTTGAGGCTCCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: GSQELLPSPTPL*ALWKLNLRLQR Trigger: CCTCTGGAGCCTCAAGTTCAACTTCCATAGGGCCAAAAGGGGAGTCGGGCTGGGCAGAAGCTCCTGAGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS CCA 72 bp | TCAGAGTGGACATCATTCACAGGGCAGTCAAGGGGATaGCAAAGGGATGGCCACCAGGCAGCCAATCCTAGG | + |
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Preference number: 6 (lower is better) Translates to: SEWTSFTGQSRG*QRDGHQAANPR Trigger: CCTAGGATTGGCTGCCTGGTGGCCATCCCTTTGCCATCCCCTTGACTGCCCTGTGAATGATGTCCACTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000660778.1 ENST00000661781.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 |
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| CDS CAA 72 bp | AGCCCGACTCCCCTTTTGGCCCTATGGAAGTTGAACTaGAGGCTCCAGAGGCAGGCTACACAAGGAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SPTPLLALWKLN*RLQRQATQGAP Trigger: AGGAGCTCCTTGTGTAGCCTGCCTCTGGAGCCTCAAGTTCAACTTCCATAGGGCCAAAAGGGGAGTCGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS CAA 72 bp | CCTCCACTACACTCTCAGACTCTCAGACCATTTGCTTaGGTTCTCAGGAGCTTCTGCCCAGCCCGACTCCCC | + |
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Preference number: 6 (lower is better) Translates to: PPLHSQTLRPFA*VLRSFCPARLP Trigger: GGGGAGTCGGGCTGGGCAGAAGCTCCTGAGAACCAAAGCAAATGGTCTGAGAGTCTGAGAGTGTAGTGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS GCA 72 bp | TTGCTGGCATGCCTCCAAACGGTATCCACCAGCGCCTaGTCCGATTCACGCCAAGGTGACATGCACACATTT | + |
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Preference number: 6 (lower is better) Translates to: LLACLQTVSTSA*SDSRQGDMHTF Trigger: AAATGTGTGCATGTCACCTTGGCGTGAATCGGAGCAGGCGCTGGTGGATACCGTTTGGAGGCATGCCAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS CCA 72 bp | CTCCACTACACTCTCAGACTCTCAGACCATTTGCTTTaGTTCTCAGGAGCTTCTGCCCAGCCCGACTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: LHYTLRLSDHLL*FSGASAQPDSP Trigger: AGGGGAGTCGGGCTGGGCAGAAGCTCCTGAGAACCAAAGCAAATGGTCTGAGAGTCTGAGAGTGTAGTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS CAA 90 bp | ATTTGCTTTGGTTCTCAGGAGCTTCTGCCCAGCCCGACTCCCCTTTaGGCCCTATGGAAGTTGAACTTGAGGCTCCAGAGGCAGGCTACA | + |
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Preference number: 6 (lower is better) Translates to: ICFGSQELLPSPTPL*ALWKLNLRLQRQAT Trigger: TGTAGCCTGCCTCTGGAGCCTCAAGTTCAACTTCCATAGGGCCAAAAGGGGAGTCGGGCTGGGCAGAAGCTCCTGAGAACCAAAGCAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS CAA 90 bp | AACACGTTACCTCCACTACACTCTCAGACTCTCAGACCATTTGCTTaGGTTCTCAGGAGCTTCTGCCCAGCCCGACTCCCCTTTTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: NTLPPLHSQTLRPFA*VLRSFCPARLPFWP Trigger: GGGCCAAAAGGGGAGTCGGGCTGGGCAGAAGCTCCTGAGAACCAAAGCAAATGGTCTGAGAGTCTGAGAGTGTAGTGGAGGTAACGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS CAA 90 bp | CTTCTGGAGCCTTACAGCCCACCTTTGACAAGAGATTCAGACACCTaGAATTCCTGTGCTTACCAACGGCCAGGCCAAGGAGAGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LLEPYSPPLTRDSDT*NSCAYQRPGQGESR Trigger: CCTGGACTCTCCTTGGCCTGGCCGTTGGTAAGCACAGGAATTCAAGGTGTCTGAATCTCTTGTCAAAGGTGGGCTGTAAGGCTCCAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000660778.1 ENST00000661781.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 |
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| CDS TCA 72 bp | GCTGAGCCCTCATATTGGGGTACCCTTGCTCATCTATaGGCCCAAAGGCCCAACATGGCTGAACTTTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: AEPSYWGTLAHL*AQRPNMAELCF Trigger: GAAGCAAAGTTCAGCCATGTTGGGCCTTTGGGCTCATAGATGAGCAAGGGTACCCCAATATGAGGGCTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS GCA 72 bp | GTTACCTCCACTACACTCTCAGACTCTCAGACCATTTaGTTTGGTTCTCAGGAGCTTCTGCCCAGCCCGACT | + |
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Preference number: 6 (lower is better) Translates to: VTSTTLSDSQTI*FGSQELLPSPT Trigger: AGTCGGGCTGGGCAGAAGCTCCTGAGAACCAAAGCAAATGGTCTGAGAGTCTGAGAGTGTAGTGGAGGTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS GCA 72 bp | TGCTTACCAACGGCCAGGCCAAGGAGAGTCCAGGAATaGCACCTGCTTCCCATGAGAAAGGAATTTCTCACA | + |
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Preference number: 6 (lower is better) Translates to: CLPTARPRRVQE*HLLPMRKEFLT Trigger: TGTGAGAAATTCCTTTCTCATGGGAAGCAGGTGGCATTCCTGGACTCTCCTTGGCCTGGCCGTTGGTAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000660778.1 ENST00000661781.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 |
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| CDS CCA 72 bp | GTAAGCAGCAAACTGTTTCTCATGAGAGCAGGGTGTTaGCAAACTGACAACCTGTGTCTGCCGCCCAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: VSSKLFLMRAGC*QTDNLCLPPRR Trigger: CCTTCTGGGCGGCAGACACAGGTTGTCAGTTTGCCAACACCCTGCTCTCATGAGAAACAGTTTGCTGCTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665630.1 |
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| CDS CAA 72 bp | CTGGGGAGACACCTGATCACTGCTCTCTTGCCTCATTaGGGGCAAATAAGCACGACACCACACACACACACA | + |
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Preference number: 6 (lower is better) Translates to: LGRHLITALLPH*GQISTTPHTHT Trigger: TGTGTGTGTGTGTGGTGTCGTGCTTATTTGCCCCAAATGAGGCAAGAGAGCAGTGATCAGGTGTCTCCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000660778.1 ENST00000661781.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 |
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| CDS TCA 72 bp | CTCCAGTTCTGCCAAGTAGTCGCCACTCTATATCCCTaGCTCTGGGCCACTGTAGAGTATTCTTGTTACCGG | + |
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Preference number: 6 (lower is better) Translates to: LQFCQVVATLYP*LWATVEYSCYR Trigger: CCGGTAACAAGAATACTCTACAGTGGCCCAGAGTCAGGGATATAGAGTGGCGACTACTTGGCAGAACTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS TCA 72 bp | GGCCAAGGAGAGTCCAGGAATGCCACCTGCTTCCCATaGGAAAGGAATTTCTCACATGACACAGGGAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: GQGESRNATCFP*ERNFSHDTGKE Trigger: CTCTTTCCCTGTGTCATGTGAGAAATTCCTTTCTCATGGGAAGCAGGTGGCATTCCTGGACTCTCCTTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000660778.1 ENST00000661781.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 |
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| CDS CCA 72 bp | GTACCCTTGCTCATCTATGAGCCCAAAGGCCCAACATaGCTGAACTTTGCTTCCCAGTCTTTGAACTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: VPLLIYEPKGPT*LNFASQSLNSA Trigger: GGCAGAGTTCAAAGACTGGGAAGCAAAGTTCAGCCATGTTGGGCCTTTGGGCTCATAGATGAGCAAGGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS CCA 72 bp | CTGCTAGTATTCCTATGTCCGGAATTGGTGGGTTCTTaGTCTGACTTCAAGAATGAAGCCGCGGACTGTCGC | + |
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Preference number: 6 (lower is better) Translates to: LLVFLCPELVGS*SDFKNEAADCR Trigger: GCGACAGTCCGCGGCTTCATTCTTGAAGTCAGACCAAGAACCCACCAATTCCGGACATAGGAATACTAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560195.2 ENST00000660778.1 |
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| CDS CAA 90 bp | AGCCGAATGTCCAGAAAGTCCCTGCTAGTATTCCTATGTCCGGAATaGGTGGGTTCTTGGTCTGACTTCAAGAATGAAGCCGCGGACTGT | + |
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Preference number: 6 (lower is better) Translates to: SRMSRKSLLVFLCPE*VGSWSDFKNEAADC Trigger: ACAGTCCGCGGCTTCATTCTTGAAGTCAGACCAAGAACCCACCAATTCCGGACATAGGAATACTAGCAGGGACTTTCTGGACATTCGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560195.2 ENST00000660778.1 |
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| CDS GCA 72 bp | ACCTTTGACAAGAGATTCAGACACCTTGAATTCCTGTaGTTACCAACGGCCAGGCCAAGGAGAGTCCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: TFDKRFRHLEFL*LPTARPRRVQE Trigger: TTCCTGGACTCTCCTTGGCCTGGCCGTTGGTAAGCACAGGAATTCAAGGTGTCTGAATCTCTTGTCAAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000660778.1 ENST00000661781.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 |
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| CDS CCA 72 bp | CTGCACCTGAACTTGAGAATCTTCAGTTTTTCTGAGTaGCCTGGGGTCTCAGAGTGGACATCATTCACAGGG | + |
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Preference number: 6 (lower is better) Translates to: LHLNLRIFSFSE*PGVSEWTSFTG Trigger: CCCTGTGAATGATGTCCACTCTGAGACCCCAGGCCACTCAGAAAAACTGAAGATTCTCAAGTTCAGGTGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000660778.1 ENST00000661781.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 |
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| CDS CAA 90 bp | GTTACCGGCCAGGACTCAAACTATTTAAACTTGCAAATAGGCTACTaGAGTCTGCAAGGACTTGGGGTGATGCAGCCAGAGAGGACACGA | + |
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Preference number: 6 (lower is better) Translates to: VTGQDSNYLNLQIGY*SLQGLGVMQPERTR Trigger: TCGTGTCCTCTCTGGCTGCATCACCCCAAGTCCTTGCAGACTCAAGTAGCCTATTTGCAAGTTTAAATAGTTTGAGTCCTGGCCGGTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS GCA 72 bp | TTCATGAAACTAGATGCTGGGGAGACACCTGATCACTaGTCTCTTGCCTCATTTGGGGCAAATAAGCACGAC | + |
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Preference number: 6 (lower is better) Translates to: FMKLDAGETPDH*SLASFGANKHD Trigger: GTCGTGCTTATTTGCCCCAAATGAGGCAAGAGAGCAGTGATCAGGTGTCTCCCCAGCATCTAGTTTCATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000660778.1 ENST00000661781.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 |
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| CDS CCA 72 bp | AAACTTGCAAATAGGCTACTTGAGTCTGCAAGGACTTaGGGTGATGCAGCCAGAGAGGACACGAACACGTTA | + |
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Preference number: 6 (lower is better) Translates to: KLANRLLESART*GDAAREDTNTL Trigger: TAACGTGTTCGTGTCCTCTCTGGCTGCATCACCCCAAGTCCTTGCAGACTCAAGTAGCCTATTTGCAAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS CAA 90 bp | ACTGATAAGTTCCAGAATTTGCTGAGCCCTCATATTGGGGTACCCTaGCTCATCTATGAGCCCAAAGGCCCAACATGGCTGAACTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: TDKFQNLLSPHIGVP*LIYEPKGPTWLNFA Trigger: AGCAAAGTTCAGCCATGTTGGGCCTTTGGGCTCATAGATGAGCAAGGGTACCCCAATATGAGGGCTCAGCAAATTCTGGAACTTATCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS CAA 90 bp | TCTCCTTCTCCTCTAAAGGTCTTCAGAACTGATAAGTTCCAGAATTaGCTGAGCCCTCATATTGGGGTACCCTTGCTCATCTATGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: SPSPLKVFRTDKFQN*LSPHIGVPLLIYEP Trigger: GGGCTCATAGATGAGCAAGGGTACCCCAATATGAGGGCTCAGCAAATTCTGGAACTTATCAGTTCTGAAGACCTTTAGAGGAGAAGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000560195.2 ENST00000561215.2 ENST00000660065.1 ENST00000660778.1 ENST00000661781.1 ENST00000664520.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 ENST00000670525.1 ENST00000671201.1 |
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| CDS GCA 72 bp | AAATTGCATTACTATTCTGAAAGAGGATCCTCCAACTaGAGAACATCAAAGCTCCCCCACCACCAGGACCTG | + |
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Preference number: 6 (lower is better) Translates to: KLHYYSERGSSN*RTSKLPHHQDL Trigger: CAGGTCCTGGTGGTGGGGGAGCTTTGATGTTCTGCAGTTGGAGGATCCTCTTTCAGAATAGTAATGCAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000660778.1 ENST00000661781.1 ENST00000665630.1 ENST00000665807.1 ENST00000670234.1 |
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| CDS CAA 72 bp | TCCAGAAAGTCCCTGCTAGTATTCCTATGTCCGGAATaGGTGGGTTCTTGGTCTGACTTCAAGAATGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: SRKSLLVFLCPE*VGSWSDFKNEA Trigger: GGCTTCATTCTTGAAGTCAGACCAAGAACCCACCAATTCCGGACATAGGAATACTAGCAGGGACTTTCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560195.2 ENST00000660778.1 |
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| CDS TCA 72 bp | CAAAACCATAAACCACGGAGGCCAGAAGATACTGGATaGCATATTCAAAGAGCTGACCAATGTCAACAAAGA | + |
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Preference number: 6 (lower is better) Translates to: QNHKPRRPEDTG*HIQRADQCQQR Trigger: TCTTTGTTGACATTGGTCAGCTCTTTGAATATGTCATCCAGTATCTTCTGGCCTCCGTGGTTTATGGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000664520.1 ENST00000670525.1 |
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