Pregenerated sensors for LINC01581 (Homo sapiens)
Ensembl gene IDs: ENSG00000259724Ensembl transcript IDs: ENST00000556357.1, ENST00000558874.1, ENST00000658527.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCCACACTCTGTGGAAAAAGTCACCAATCCATGCAGGCTCCCCCATaGTCCAATCCTGGCTCCAGTCCATACATCCGTGGCCTTTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: PTLCGKSHQSMQAPP*SNPGSSPYIRGLSA Trigger: AGCAGAAAGGCCACGGATGTATGGACTGGAGCCAGGATTGGAGCATGGGGGAGCCTGCATGGATTGGTGACTTTTTCCACAGAGTGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000556357.1 ENST00000558874.1 |
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| CDS GCA 90 bp | ATAGGTTTATGGATTGACTGCACTCTCTCTGTTCGGGCTTCCCCTTaGCTTCTCAGTTATTTCCTTGGCGCCTCTAAGGATCCCCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: IGLWIDCTLSVRASP*LLSYFLGASKDPQK Trigger: TTTCTGGGGATCCTTAGAGGCGCCAAGGAAATAACTGAGAAGGCAAGGGGAAGCCCGAACAGAGAGAGTGCAGTCAATCCATAAACCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS TCA 90 bp | TTTTCCAGCTTTCGTTGTGGAGACTCTTCCCGGAGGAGACCATCTTaGAAGAGCTTTATGGAAGAAAGCCAGCCTAAAGTCCCAGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: FSSFRCGDSSRRRPS*KSFMEESQPKVPVQ Trigger: TTGGACTGGGACTTTAGGCTGGCTTTCTTCCATAAAGCTCTTTCAAGATGGTCTCCTCCGGGAAGAGTCTCCACAACGAAAGCTGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS TCA 90 bp | GCCATCAGATCTGATTTAGGGAACACCTGCCCTCTTGTGGTTCTCTaGGCTCATCTGTCTGGAGTTAAGGAAACCTTTTCCAGCTTTCGT | + |
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Preference number: 5 (lower is better) Translates to: AIRSDLGNTCPLVVL*AHLSGVKETFSSFR Trigger: ACGAAAGCTGGAAAAGGTTTCCTTAACTCCAGACAGATGAGCTCAGAGAACCACAAGAGGGCAGGTGTTCCCTAAATCAGATCTGATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS CCA 90 bp | GTTGTGGAGACTCTTCCCGGAGGAGACCATCTTGAAAGAGCTTTATaGAAGAAAGCCAGCCTAAAGTCCCAGTCCAATTTGCCTAGATAC | + |
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Preference number: 5 (lower is better) Translates to: VVETLPGGDHLERAL*KKASLKSQSNLPRY Trigger: GTATCTAGGCAAATTGGACTGGGACTTTAGGCTGGCTTTCTTCCATAAAGCTCTTTCAAGATGGTCTCCTCCGGGAAGAGTCTCCACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS TCA 90 bp | CTCTTGGCCATCCTTTTCTGTCCTATAGACCTATGGACAGAGTACTaGTCTACAGCTAAAGAGGCACGAACCCACACTCTGTGGAAAAAG | + |
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Preference number: 5 (lower is better) Translates to: LLAILFCPIDLWTEY*STAKEARTHTLWKK Trigger: CTTTTTCCACAGAGTGTGGGTTCGTGCCTCTTTAGCTGTAGATCAGTACTCTGTCCATAGGTCTATAGGACAGAAAAGGATGGCCAAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000556357.1 ENST00000558874.1 |
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| CDS TCA 90 bp | GGAACCTCACTCAGTCATGGACTCATATTTCTGTTGTCATGTTCATaGAAACTTTCCCATGTCAAGTTAGAAAACCTCTCTCCAGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: GTSLSHGLIFLLSCS*KLSHVKLENLSPGQ Trigger: TTGGCCTGGAGAGAGGTTTTCTAACTTGACATGGGAAAGTTTTCATGAACATGACAACAGAAATATGAGTCCATGACTGAGTGAGGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS CCA 90 bp | ATCAATTGTGTAGACTGGGTTGGAAAGAGAAATCTCTTTAGTCCCTaGACTGGAACATGTAAAATTCAGGAGCTCTTGGCCATCCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: INCVDWVGKRNLFSP*TGTCKIQELLAILF Trigger: GAAAAGGATGGCCAAGAGCTCCTGAATTTTACATGTTCCAGTCCAGGGACTAAAGAGATTTCTCTTTCCAACCCAGTCTACACAATTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000556357.1 ENST00000558874.1 |
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| CDS GCA 90 bp | GTCTCTCCTTCCAATTATTGCTGCGAGTTTGAGGATGTCATCTTTTaGCCTTTTCAGAAGGAGAACTTTCATGTTCCGTATGAATATAAT | + |
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Preference number: 5 (lower is better) Translates to: VSPSNYCCEFEDVIF*PFQKENFHVPYEYN Trigger: ATTATATTCATACGGAACATGAAAGTTCTCCTTCTGAAAAGGGCAAAAGATGACATCCTCAAACTCGCAGCAATAATTGGAAGGAGAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS CCA 90 bp | TTGTTTCTTAAGAAGACAGAAGACACATCTCTCAGTTGCTGTCTTTaGATTTTGTTGGCAGTATTGGAGAGTTTGATGTGCTGCTACATA | + |
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Preference number: 5 (lower is better) Translates to: LFLKKTEDTSLSCCL*ILLAVLESLMCCYI Trigger: TATGTAGCAGCACATCAAACTCTCCAATACTGCCAACAAAATCCAAAGACAGCAACTGAGAGATGTGTCTTCTGTCTTCTTAAGAAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658527.1 |
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| CDS CCA 90 bp | TCCTCATTATGTCCTGTTCTTATAGATTGGAACCTCACTCAGTCATaGACTCATATTTCTGTTGTCATGTTCATGAAAACTTTCCCATGT | + |
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Preference number: 5 (lower is better) Translates to: SSLCPVLIDWNLTQS*THISVVMFMKTFPC Trigger: ACATGGGAAAGTTTTCATGAACATGACAACAGAAATATGAGTCCATGACTGAGTGAGGTTCCAATCTATAAGAACAGGACATAATGAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS TCA 90 bp | TTTCATGTTCCGTATGAATATAATCAATTAACTCAGCTTCCAGTGTaGCCTGTCACTTCCTCATTATGTCCTGTTCTTATAGATTGGAAC | + |
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Preference number: 5 (lower is better) Translates to: FHVPYEYNQLTQLPV*PVTSSLCPVLIDWN Trigger: GTTCCAATCTATAAGAACAGGACATAATGAGGAAGTGACAGGTCACACTGGAAGCTGAGTTAATTGATTATATTCATACGGAACATGAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS GCA 72 bp | TGTGGAAAAAGTCACCAATCCATGCAGGCTCCCCCATaGTCCAATCCTGGCTCCAGTCCATACATCCGTGGC | + |
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Preference number: 6 (lower is better) Translates to: CGKSHQSMQAPP*SNPGSSPYIRG Trigger: GCCACGGATGTATGGACTGGAGCCAGGATTGGAGCATGGGGGAGCCTGCATGGATTGGTGACTTTTTCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000556357.1 ENST00000558874.1 |
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| CDS GCA 72 bp | CAGTCCAATTTGCCTAGATACTGGATGGTGGCAGCTTaGATCCAGGGATCCCAGCTCAGGCCAAAAAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: QSNLPRYWMVAA*IQGSQLRPKSG Trigger: GCCACTTTTTGGCCTGAGCTGGGATCCCTGGATGCAAGCTGCCACCATCCAGTATCTAGGCAAATTGGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS CAA 90 bp | CAACTGGCCTCCACCAGGAGTTTGTGGTCCACTCTGGAGGGCTCTTaGGAGGTTCCTTCTAGGTCCATAGAGCAGAAGTTCTCAAACTGC | + |
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Preference number: 6 (lower is better) Translates to: QLASTRSLWSTLEGS*EVPSRSIEQKFSNC Trigger: GCAGTTTGAGAACTTCTGCTCTATGGACCTAGAAGGAACCTCCAAAGAGCCCTCCAGAGTGGACCACAAACTCCTGGTGGAGGCCAGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS CCA 72 bp | AGTTCCATCCAGACAGGCAGGACAGATCATAATGCCTaGAAGCTCTGCTCCCTGCTAGAGGAGAACTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SSIQTGRTDHNA*KLCSLLEENLQ Trigger: CTGCAAGTTCTCCTCTAGCAGGGAGCAGAGCTTCCAGGCATTATGATCTGTCCTGCCTGTCTGGATGGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556357.1 |
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| CDS TCA 72 bp | GAGATGAGATGGGGAAGATGGGCCCAAGCTGCAACATaGAGGTCCATGATGAACAGTTGGCATCTCCTACAG | + |
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Preference number: 6 (lower is better) Translates to: EMRWGRWAQAAT*RSMMNSWHLLQ Trigger: CTGTAGGAGATGCCAACTGTTCATCATGGACCTTCATGTTGCAGCTTGGGCCCATCTTCCCCATCTCATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000558874.1 ENST00000658527.1 |
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| CDS GCA 72 bp | TGGATTGACTGCACTCTCTCTGTTCGGGCTTCCCCTTaGCTTCTCAGTTATTTCCTTGGCGCCTCTAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: WIDCTLSVRASP*LLSYFLGASKD Trigger: ATCCTTAGAGGCGCCAAGGAAATAACTGAGAAGGCAAGGGGAAGCCCGAACAGAGAGAGTGCAGTCAATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS CAA 90 bp | GCTCCAATCCTGGCTCCAGTCCATACATCCGTGGCCTTTCTGCTCTaGGCTTCCATGAAATGGCCTAATGACGTTCTAATAACCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: APILAPVHTSVAFLL*ASMKWPNDVLITFS Trigger: GGAGAAGGTTATTAGAACGTCATTAGGCCATTTCATGGAAGCCAAGAGCAGAAAGGCCACGGATGTATGGACTGGAGCCAGGATTGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000556357.1 ENST00000558874.1 |
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| CDS CAA 72 bp | CAGGTGAGGTTGATGCTGATGGTCCCAGGACTCACTTaGAGAACCGCTGTGCCAGAGAATGTCAATTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: QVRLMLMVPGLT*RTAVPENVNFF Trigger: GAAGAAATTGACATTCTCTGGCACAGCGGTTCTCAAAGTGAGTCCTGGGACCATCAGCATCAACCTCACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS CAA 72 bp | CTGGCTCCAGTCCATACATCCGTGGCCTTTCTGCTCTaGGCTTCCATGAAATGGCCTAATGACGTTCTAATA | + |
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Preference number: 6 (lower is better) Translates to: LAPVHTSVAFLL*ASMKWPNDVLI Trigger: TATTAGAACGTCATTAGGCCATTTCATGGAAGCCAAGAGCAGAAAGGCCACGGATGTATGGACTGGAGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000556357.1 ENST00000558874.1 |
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| CDS CAA 90 bp | GCTAGAGTTCAAGATTTTGCATTTCTGACAAGTTCTCAGGTGAGGTaGATGCTGATGGTCCCAGGACTCACTTTGAGAACCGCTGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: ARVQDFAFLTSSQVR*MLMVPGLTLRTAVP Trigger: TGGCACAGCGGTTCTCAAAGTGAGTCCTGGGACCATCAGCATCAACCTCACCTGAGAACTTGTCAGAAATGCAAAATCTTGAACTCTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS CAA 90 bp | ACAAGTTCTCAGGTGAGGTTGATGCTGATGGTCCCAGGACTCACTTaGAGAACCGCTGTGCCAGAGAATGTCAATTTCTTCACAGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: TSSQVRLMLMVPGLT*RTAVPENVNFFTVL Trigger: AAGAACTGTGAAGAAATTGACATTCTCTGGCACAGCGGTTCTCAAAGTGAGTCCTGGGACCATCAGCATCAACCTCACCTGAGAACTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS TCA 72 bp | TTTCGTTGTGGAGACTCTTCCCGGAGGAGACCATCTTaGAAGAGCTTTATGGAAGAAAGCCAGCCTAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: FRCGDSSRRRPS*KSFMEESQPKV Trigger: GACTTTAGGCTGGCTTTCTTCCATAAAGCTCTTTCAAGATGGTCTCCTCCGGGAAGAGTCTCCACAACGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS GCA 72 bp | GAGCAACGGGGAGTTCGTGTCTCTCCTTCCAATTATTaGTGCGAGTTTGAGGATGTCATCTTTTGCCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: EQRGVRVSPSNY*CEFEDVIFCPF Trigger: AAAAGGGCAAAAGATGACATCCTCAAACTCGCAGCAATAATTGGAAGGAGAGACACGAACTCCCCGTTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS CCA 72 bp | ACTCTTCCCGGAGGAGACCATCTTGAAAGAGCTTTATaGAAGAAAGCCAGCCTAAAGTCCCAGTCCAATTTG | + |
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Preference number: 6 (lower is better) Translates to: TLPGGDHLERAL*KKASLKSQSNL Trigger: CAAATTGGACTGGGACTTTAGGCTGGCTTTCTTCCATAAAGCTCTTTCAAGATGGTCTCCTCCGGGAAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS TCA 72 bp | ATCCTTTTCTGTCCTATAGACCTATGGACAGAGTACTaGTCTACAGCTAAAGAGGCACGAACCCACACTCTG | + |
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Preference number: 6 (lower is better) Translates to: ILFCPIDLWTEY*STAKEARTHTL Trigger: CAGAGTGTGGGTTCGTGCCTCTTTAGCTGTAGATCAGTACTCTGTCCATAGGTCTATAGGACAGAAAAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000556357.1 ENST00000558874.1 |
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| CDS CCA 72 bp | AAACCCCTGACCCTTCTAATCCATTGTGTATTTTCATaGACGGAAAGGGATTCCAGCAGGAGGCAAAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: KPLTLLIHCVFS*TERDSSRRQSS Trigger: ACTACTTTGCCTCCTGCTGGAATCCCTTTCCGTCCATGAAAATACACAATGGATTAGAAGGGTCAGGGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS CAA 72 bp | GTCCAGAGTTGCATAACTAATAAGCGAGACTCAGATTaGCCTGACTCCAAACCCCTGACCCTTCTAATCCAT | + |
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Preference number: 6 (lower is better) Translates to: VQSCITNKRDSD*PDSKPLTLLIH Trigger: ATGGATTAGAAGGGTCAGGGGTTTGGAGTCAGGCAAATCTGAGTCTCGCTTATTAGTTATGCAACTCTGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS CCA 72 bp | TGTGATCACATCTTTAGTCTCATAAGAGAGGAATGTTaGACGTTGAGAACGTTGCTCATGGCTTCTCCACTG | + |
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Preference number: 6 (lower is better) Translates to: CDHIFSLIREEC*TLRTLLMASPL Trigger: CAGTGGAGAAGCCATGAGCAACGTTCTCAACGTCCAACATTCCTCTCTTATGAGACTAAAGATGTGATCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS CCA 72 bp | TCCAGGGATCCCAGCTCAGGCCAAAAAGTGGCATTTTaGGGATTATGTCCTAGTGGTTTATTCTTTGTAAGA | + |
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Preference number: 6 (lower is better) Translates to: SRDPSSGQKVAF*GLCPSGLFFVR Trigger: TCTTACAAAGAATAAACCACTAGGACATAATCCCCAAAATGCCACTTTTTGGCCTGAGCTGGGATCCCTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS CAA 72 bp | GAGTTCGTGTCTCTCCTTCCAATTATTGCTGCGAGTTaGAGGATGTCATCTTTTGCCCTTTTCAGAAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: EFVSLLPIIAAS*RMSSFALFRRR Trigger: TCTCCTTCTGAAAAGGGCAAAAGATGACATCCTCAAACTCGCAGCAATAATTGGAAGGAGAGACACGAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS CAA 90 bp | TCCAGTGTGACCTGTCACTTCCTCATTATGTCCTGTTCTTATAGATaGGAACCTCACTCAGTCATGGACTCATATTTCTGTTGTCATGTT | + |
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Preference number: 6 (lower is better) Translates to: SSVTCHFLIMSCSYR*EPHSVMDSYFCCHV Trigger: AACATGACAACAGAAATATGAGTCCATGACTGAGTGAGGTTCCAATCTATAAGAACAGGACATAATGAGGAAGTGACAGGTCACACTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS GCA 72 bp | TCCAATTATTGCTGCGAGTTTGAGGATGTCATCTTTTaGCCTTTTCAGAAGGAGAACTTTCATGTTCCGTAT | + |
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Preference number: 6 (lower is better) Translates to: SNYCCEFEDVIF*PFQKENFHVPY Trigger: ATACGGAACATGAAAGTTCTCCTTCTGAAAAGGGCAAAAGATGACATCCTCAAACTCGCAGCAATAATTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS GCA 72 bp | TGGATTTTGTTGGCAGTATTGGAGAGTTTGATGTGCTaGTACATAAATTTACAAAGTGGCTTGAAAACCTGC | + |
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Preference number: 6 (lower is better) Translates to: WILLAVLESLMC*YINLQSGLKTC Trigger: GCAGGTTTTCAAGCCACTTTGTAAATTTATGTAGCAGCACATCAAACTCTCCAATACTGCCAACAAAATCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658527.1 |
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| CDS CAA 90 bp | GTATTGGAGAGTTTGATGTGCTGCTACATAAATTTACAAAGTGGCTaGAAAACCTGCAAGTTTGAGATGGAACCTAAGACACACATATCT | + |
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Preference number: 6 (lower is better) Translates to: VLESLMCCYINLQSG*KTCKFEMEPKTHIS Trigger: AGATATGTGTGTCTTAGGTTCCATCTCAAACTTGCAGGTTTTCAAGCCACTTTGTAAATTTATGTAGCAGCACATCAAACTCTCCAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658527.1 |
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| CDS TCA 72 bp | CCGTATGAATATAATCAATTAACTCAGCTTCCAGTGTaGCCTGTCACTTCCTCATTATGTCCTGTTCTTATA | + |
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Preference number: 6 (lower is better) Translates to: PYEYNQLTQLPV*PVTSSLCPVLI Trigger: TATAAGAACAGGACATAATGAGGAAGTGACAGGTCACACTGGAAGCTGAGTTAATTGATTATATTCATACGG 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS GCA 72 bp | TGCTGCTACATAAATTTACAAAGTGGCTTGAAAACCTaGAAGTTTGAGATGGAACCTAAGACACACATATCT | + |
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Preference number: 6 (lower is better) Translates to: CCYINLQSGLKT*KFEMEPKTHIS Trigger: AGATATGTGTGTCTTAGGTTCCATCTCAAACTTGCAGGTTTTCAAGCCACTTTGTAAATTTATGTAGCAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658527.1 |
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| CDS GCA 72 bp | CTTTGGATTTTGTTGGCAGTATTGGAGAGTTTGATGTaGTGCTACATAAATTTACAAAGTGGCTTGAAAACC | + |
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Preference number: 6 (lower is better) Translates to: LWILLAVLESLM*CYINLQSGLKT Trigger: GGTTTTCAAGCCACTTTGTAAATTTATGTAGCAGCACATCAAACTCTCCAATACTGCCAACAAAATCCAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658527.1 |
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| CDS CCA 72 bp | TGTCCTGTTCTTATAGATTGGAACCTCACTCAGTCATaGACTCATATTTCTGTTGTCATGTTCATGAAAACT | + |
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Preference number: 6 (lower is better) Translates to: CPVLIDWNLTQS*THISVVMFMKT Trigger: AGTTTTCATGAACATGACAACAGAAATATGAGTCCATGACTGAGTGAGGTTCCAATCTATAAGAACAGGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558874.1 |
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| CDS CAA 72 bp | AGTTTGATGTGCTGCTACATAAATTTACAAAGTGGCTaGAAAACCTGCAAGTTTGAGATGGAACCTAAGACA | + |
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Preference number: 6 (lower is better) Translates to: SLMCCYINLQSG*KTCKFEMEPKT Trigger: TGTCTTAGGTTCCATCTCAAACTTGCAGGTTTTCAAGCCACTTTGTAAATTTATGTAGCAGCACATCAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658527.1 |
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