Pregenerated sensors for LINC01580 (Homo sapiens)
Ensembl gene IDs: ENSG00000258785Ensembl transcript IDs: ENST00000555255.1, ENST00000555364.6, ENST00000652797.1, ENST00000653712.1, ENST00000657169.1, ENST00000657668.1, ENST00000658249.1, ENST00000659027.1, ENST00000661202.1, ENST00000661588.1, ENST00000668781.1, ENST00000669185.1, ENST00000670232.1
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCGGCTCCGCGCCTAGCTCTCCCTGGGCAGGTGTGGGATCTGGGCTaGTGGCGGGAGCCAAGCACAGCCTACCGGGCCAAGTGGGCGGAA | + |
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Preference number: 5 (lower is better) Translates to: AAPRLALPGQVWDLG*WREPSTAYRAKWAE Trigger: TTCCGCCCACTTGGCCCGGTAGGCTGTGCTTGGCTCCCGCCACCAGCCCAGATCCCACACCTGCCCAGGGAGAGCTAGGCGCGGAGCCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS CCA 90 bp | GCTCCGCGCCTAGCTCTCCCTGGGCAGGTGTGGGATCTGGGCTGGTaGCGGGAGCCAAGCACAGCCTACCGGGCCAAGTGGGCGGAACAA | + |
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Preference number: 5 (lower is better) Translates to: APRLALPGQVWDLGW*REPSTAYRAKWAEQ Trigger: TTGTTCCGCCCACTTGGCCCGGTAGGCTGTGCTTGGCTCCCGCCACCAGCCCAGATCCCACACCTGCCCAGGGAGAGCTAGGCGCGGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS CCA 90 bp | GCTGGCGCCTGGAGCTGCCAGCCCCACTGCAGCAGCCGGTATGTATaGCTGTTGCCGGTCCCTGCGCTCGTTCACCCACACACCCCTTGC | + |
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Preference number: 5 (lower is better) Translates to: AGAWSCQPHCSSRYV*LLPVPALVHPHTPC Trigger: GCAAGGGGTGTGTGGGTGAACGAGCGCAGGGACCGGCAACAGCCATACATACCGGCTGCTGCAGTGGGGCTGGCAGCTCCAGGCGCCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS GCA 90 bp | TGGTCCAGCCTCACGCAGAGCCACAACTGTGCTGGCGCCTGGAGCTaGCAGCCCCACTGCAGCAGCCGGTATGTATGGCTGTTGCCGGTC | + |
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Preference number: 5 (lower is better) Translates to: WSSLTQSHNCAGAWS*QPHCSSRYVWLLPV Trigger: GACCGGCAACAGCCATACATACCGGCTGCTGCAGTGGGGCTGGCAGCTCCAGGCGCCAGCACAGTTGTGGCTCTGCGTGAGGCTGGACCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS GCA 90 bp | CCACATGCCGTCCATCTGGTCCAGCCTCACGCAGAGCCACAACTGTaGTGGCGCCTGGAGCTGCCAGCCCCACTGCAGCAGCCGGTATGT | + |
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Preference number: 5 (lower is better) Translates to: PHAVHLVQPHAEPQL*WRLELPAPLQQPVC Trigger: ACATACCGGCTGCTGCAGTGGGGCTGGCAGCTCCAGGCGCCAGCACAGTTGTGGCTCTGCGTGAGGCTGGACCAGATGGACGGCATGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS CCA 90 bp | GATCTGGGCTGGTGGCGGGAGCCAAGCACAGCCTACCGGGCCAAGTaGGCGGAACAAGCCCAGTGGGCACGAGCAATACTCAGGCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: DLGWWREPSTAYRAK*AEQAQWARAILRQK Trigger: CTTCTGCCTGAGTATTGCTCGTGCCCACTGGGCTTGTTCCGCCCACTTGGCCCGGTAGGCTGTGCTTGGCTCCCGCCACCAGCCCAGATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS CCA 90 bp | CATGCCGTCCATCTGGTCCAGCCTCACGCAGAGCCACAACTGTGCTaGCGCCTGGAGCTGCCAGCCCCACTGCAGCAGCCGGTATGTATG | + |
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Preference number: 5 (lower is better) Translates to: HAVHLVQPHAEPQLC*RLELPAPLQQPVCM Trigger: CATACATACCGGCTGCTGCAGTGGGGCTGGCAGCTCCAGGCGCCAGCACAGTTGTGGCTCTGCGTGAGGCTGGACCAGATGGACGGCATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS CCA 90 bp | TCAGACGTGGAGCAAGTTGGACTGCATAGGGACCCACCAGTGAGATaGACGCTGTCTGTAAACGGTAGGGATGGCGGCCCGTCGCGGTGG | + |
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Preference number: 5 (lower is better) Translates to: SDVEQVGLHRDPPVR*TLSVNGRDGGPSRW Trigger: CCACCGCGACGGGCCGCCATCCCTACCGTTTACAGACAGCGTCCATCTCACTGGTGGGTCCCTATGCAGTCCAACTTGCTCCACGTCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000657169.1 ENST00000657668.1 ENST00000659027.1 ENST00000670232.1 |
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| CDS GCA 90 bp | CACGCGAAGTCGGAAGTACCAGCTGCGGGAAGGAGCTGCCCACTGTaGGTCTTCTCAACTTGTTGGGACAACCTTCCTGCGGAAAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: HAKSEVPAAGRSCPL*VFSTCWDNLPAERR Trigger: TCTCCTTTCCGCAGGAAGGTTGTCCCAACAAGTTGAGAAGACGCACAGTGGGCAGCTCCTTCCCGCAGCTGGTACTTCCGACTTCGCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS CCA 90 bp | CCAGGTCACAGGACAGAATCGGCTACCCACATCTTTCATCAGCCTTaGCCTCAGGGATCTGCAGCTTTGCAAGTGGCAGGCACTGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: PGHRTESATHIFHQP*PQGSAALQVAGTVG Trigger: TCCTACAGTGCCTGCCACTTGCAAAGCTGCAGATCCCTGAGGCCAAGGCTGATGAAAGATGTGGGTAGCCGATTCTGTCCTGTGACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555255.1 |
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| CDS GCA 90 bp | GCCTCAGGGATCTGCAGCTTTGCAAGTGGCAGGCACTGTAGGAGATaGCAACTGTTCATCATGGACCTTCATGTTGCAGCTTGGGCCCAT | + |
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Preference number: 5 (lower is better) Translates to: ASGICSFASGRHCRR*QLFIMDLHVAAWAH Trigger: ATGGGCCCAAGCTGCAACATGAAGGTCCATGATGAACAGTTGGCATCTCCTACAGTGCCTGCCACTTGCAAAGCTGCAGATCCCTGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555255.1 |
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| CDS GCA 90 bp | GAGCTGCCCACTGTGCGTCTTCTCAACTTGTTGGGACAACCTTCCTaGGGAAAGGAGAGACAACCTTCCTGCAGAAAGGAGCTACCTGCT | + |
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Preference number: 5 (lower is better) Translates to: ELPTVRLLNLLGQPS*GKERQPSCRKELPA Trigger: AGCAGGTAGCTCCTTTCTGCAGGAAGGTTGTCTCTCCTTTCCGCAGGAAGGTTGTCCCAACAAGTTGAGAAGACGCACAGTGGGCAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS GCA 90 bp | AGAATCGGCTACCCACATCTTTCATCAGCCTTGGCCTCAGGGATCTaGAGCTTTGCAAGTGGCAGGCACTGTAGGAGATGCCAACTGTTC | + |
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Preference number: 5 (lower is better) Translates to: RIGYPHLSSALASGI*SFASGRHCRRCQLF Trigger: GAACAGTTGGCATCTCCTACAGTGCCTGCCACTTGCAAAGCTGCAGATCCCTGAGGCCAAGGCTGATGAAAGATGTGGGTAGCCGATTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555255.1 |
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| CDS GCA 90 bp | GGATGGTCCAGTACGTCCTCCTTAGACAGGGCAGACAGCCAGCCTTaGCGTAGATCTTTCCATTATCCATGGTGTCCCTCTTGCTCAATG | + |
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Preference number: 5 (lower is better) Translates to: GWSSTSSLDRADSQP*RRSFHYPWCPSCSM Trigger: CATTGAGCAAGAGGGACACCATGGATAATGGAAAGATCTACGGCAAGGCTGGCTGTCTGCCCTGTCTAAGGAGGACGTACTGGACCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000555364.6 ENST00000652797.1 ENST00000653712.1 ENST00000657169.1 ENST00000657668.1 ENST00000658249.1 ENST00000659027.1 ENST00000661202.1 ENST00000661588.1 ENST00000668781.1 ENST00000669185.1 ENST00000670232.1 |
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| CDS CCA 90 bp | GCTTTGCAAGTGGCAGGCACTGTAGGAGATGCCAACTGTTCATCATaGACCTTCATGTTGCAGCTTGGGCCCATCTTCCCCATCTCATCT | + |
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Preference number: 5 (lower is better) Translates to: ALQVAGTVGDANCSS*TFMLQLGPIFPISS Trigger: AGATGAGATGGGGAAGATGGGCCCAAGCTGCAACATGAAGGTCCATGATGAACAGTTGGCATCTCCTACAGTGCCTGCCACTTGCAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555255.1 |
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| CDS CCA 90 bp | TTCTGGCAAGTGGCAGGCACTGTAGGAGATGCCAACTGTTCATCATaGACCTTCATGTTGCAGCTTGGGCCCATCTTCCCCATCTCATCT | + |
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Preference number: 5 (lower is better) Translates to: FWQVAGTVGDANCSS*TFMLQLGPIFPISS Trigger: AGATGAGATGGGGAAGATGGGCCCAAGCTGCAACATGAAGGTCCATGATGAACAGTTGGCATCTCCTACAGTGCCTGCCACTTGCCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653712.1 ENST00000658249.1 ENST00000659027.1 |
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| CDS CCA 90 bp | AAGGAGCAAGTGGCAGGCACTGTAGGAGATGCCAACTGTTCATCATaGACCTTCATGTTGCAGCTTGGGCCCATCTTCCCCATCTCATCT | + |
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Preference number: 5 (lower is better) Translates to: KEQVAGTVGDANCSS*TFMLQLGPIFPISS Trigger: AGATGAGATGGGGAAGATGGGCCCAAGCTGCAACATGAAGGTCCATGATGAACAGTTGGCATCTCCTACAGTGCCTGCCACTTGCTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670232.1 |
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| CDS GCA 90 bp | CACAGGCCATCGTTTTATGGATGTATTCATGGACACATCTGGATGTaGAGAGCAGGATGGTCCAGTACGTCCTCCTTAGACAGGGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: HRPSFYGCIHGHIWM*RAGWSSTSSLDRAD Trigger: GTCTGCCCTGTCTAAGGAGGACGTACTGGACCATCCTGCTCTGCACATCCAGATGTGTCCATGAATACATCCATAAAACGATGGCCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000555364.6 ENST00000652797.1 ENST00000653712.1 ENST00000657169.1 ENST00000657668.1 ENST00000658249.1 ENST00000659027.1 ENST00000661202.1 ENST00000661588.1 ENST00000668781.1 ENST00000669185.1 ENST00000670232.1 |
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| CDS CCA 90 bp | CATTACCAAGTGGCAGGCACTGTAGGAGATGCCAACTGTTCATCATaGACCTTCATGTTGCAGCTTGGGCCCATCTTCCCCATCTCATCT | + |
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Preference number: 5 (lower is better) Translates to: HYQVAGTVGDANCSS*TFMLQLGPIFPISS Trigger: AGATGAGATGGGGAAGATGGGCCCAAGCTGCAACATGAAGGTCCATGATGAACAGTTGGCATCTCCTACAGTGCCTGCCACTTGGTAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000555364.6 ENST00000652797.1 ENST00000657169.1 ENST00000657668.1 ENST00000661202.1 ENST00000661588.1 ENST00000668781.1 ENST00000669185.1 |
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| CDS CCA 90 bp | GACAGGGCAGACAGCCAGCCTTGCCGTAGATCTTTCCATTATCCATaGTGTCCCTCTTGCTCAATGATGTGCAGTTTCTATCATCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: DRADSQPCRRSFHYP*CPSCSMMCSFYHLS Trigger: AGACAGATGATAGAAACTGCACATCATTGAGCAAGAGGGACACCATGGATAATGGAAAGATCTACGGCAAGGCTGGCTGTCTGCCCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000555364.6 ENST00000652797.1 ENST00000653712.1 ENST00000657169.1 ENST00000657668.1 ENST00000658249.1 ENST00000659027.1 ENST00000661202.1 ENST00000668781.1 ENST00000669185.1 ENST00000670232.1 |
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| CDS CCA 90 bp | AACTTTAGTGATGGGAGTTTGGAACAGGCATCTTGGAACAGGATATaGATTCTGGCAAGTGGCAGGCACTGTAGGAGATGCCAACTGTTC | + |
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Preference number: 5 (lower is better) Translates to: NFSDGSLEQASWNRI*ILASGRHCRRCQLF Trigger: GAACAGTTGGCATCTCCTACAGTGCCTGCCACTTGCCAGAATCCATATCCTGTTCCAAGATGCCTGTTCCAAACTCCCATCACTAAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653712.1 ENST00000658249.1 ENST00000659027.1 |
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| CDS TCA 90 bp | CTTGCCGTAGATCTTTCCATTATCCATGGTGTCCCTCTTGCTCAATaGTGTGCAGTGCACTCTGCAGTTGACACTGGTTTCTATCATCTG | + |
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Preference number: 5 (lower is better) Translates to: LAVDLSIIHGVPLAQ*CAVHSAVDTGFYHL Trigger: CAGATGATAGAAACCAGTGTCAACTGCAGAGTGCACTGCACATCATTGAGCAAGAGGGACACCATGGATAATGGAAAGATCTACGGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661588.1 |
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| CDS CCA 90 bp | GGCTCTGGATCATTTTCCTATAGGATTCCACAGGCCATCGTTTTATaGATGTATTCATGGACACATCTGGATGTGCAGAGCAGGATGGTC | + |
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Preference number: 5 (lower is better) Translates to: GSGSFSYRIPQAIVL*MYSWTHLDVQSRMV Trigger: GACCATCCTGCTCTGCACATCCAGATGTGTCCATGAATACATCCATAAAACGATGGCCTGTGGAATCCTATAGGAAAATGATCCAGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000555364.6 ENST00000652797.1 ENST00000653712.1 ENST00000657169.1 ENST00000657668.1 ENST00000658249.1 ENST00000659027.1 ENST00000661202.1 ENST00000661588.1 ENST00000668781.1 ENST00000669185.1 ENST00000670232.1 |
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| CDS CCA 90 bp | GAACATTACCTAAACTTTAGTGATGGGAGTTTGGAACAGGCATCTTaGAACAGGATATGGATTCTGGCAAGTGGCAGGCACTGTAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: EHYLNFSDGSLEQAS*NRIWILASGRHCRR Trigger: TCTCCTACAGTGCCTGCCACTTGCCAGAATCCATATCCTGTTCCAAGATGCCTGTTCCAAACTCCCATCACTAAAGTTTAGGTAATGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653712.1 ENST00000658249.1 ENST00000659027.1 |
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| CDS GCA 90 bp | ATCTTTCCATTATCCATGGTGTCCCTCTTGCTCAATGATGTGCAGTaGACTCTGCAGTTGACACTGGTTTCTATCATCTGTCTCCATTTG | + |
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Preference number: 5 (lower is better) Translates to: IFPLSMVSLLLNDVQ*TLQLTLVSIICLHL Trigger: CAAATGGAGACAGATGATAGAAACCAGTGTCAACTGCAGAGTGCACTGCACATCATTGAGCAAGAGGGACACCATGGATAATGGAAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661588.1 |
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| CDS TCA 90 bp | CTGCAGTTGACACTGGTTTCTATCATCTGTCTCCATTTGCTAGAATaGACATCAGGGAGGGTAGGAACTTCTCTGTTTTGTTCATTACCT | + |
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Preference number: 5 (lower is better) Translates to: LQLTLVSIICLHLLE*TSGRVGTSLFCSLP Trigger: AGGTAATGAACAAAACAGAGAAGTTCCTACCCTCCCTGATGTTCATTCTAGCAAATGGAGACAGATGATAGAAACCAGTGTCAACTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661588.1 |
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| CDS GCA 90 bp | CGTAGATCTTTCCATTATCCATGGTGTCCCTCTTGCTCAATGATGTaGAGTTTCTATCATCTGTCTCCATTTGCTAGAATGAACATCAGG | + |
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Preference number: 5 (lower is better) Translates to: RRSFHYPWCPSCSMM*SFYHLSPFARMNIR Trigger: CCTGATGTTCATTCTAGCAAATGGAGACAGATGATAGAAACTGCACATCATTGAGCAAGAGGGACACCATGGATAATGGAAAGATCTACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000555364.6 ENST00000652797.1 ENST00000653712.1 ENST00000657169.1 ENST00000657668.1 ENST00000658249.1 ENST00000659027.1 ENST00000661202.1 ENST00000668781.1 ENST00000669185.1 ENST00000670232.1 |
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| CDS CCA 90 bp | GAACATTACCTAAACTTTAGTGATGGGAGTTTGGAACAGGCATCTTaGAACAGGATATGGATTCTGGCTGTAAGCAGAGGAGACAATGAA | + |
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Preference number: 5 (lower is better) Translates to: EHYLNFSDGSLEQAS*NRIWILAVSRGDNE Trigger: TTCATTGTCTCCTCTGCTTACAGCCAGAATCCATATCCTGTTCCAAGATGCCTGTTCCAAACTCCCATCACTAAAGTTTAGGTAATGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670232.1 |
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| CDS CCA 72 bp | CCACACACCCCTTGCGGCTCCGCGCCTAGCTCTCCCTaGGCAGGTGTGGGATCTGGGCTGGTGGCGGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: PHTPCGSAPSSP*AGVGSGLVAGA Trigger: GGCTCCCGCCACCAGCCCAGATCCCACACCTGCCCAGGGAGAGCTAGGCGCGGAGCCGCAAGGGGTGTGTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS GCA 72 bp | CTGCAGCAGCCGGTATGTATGGCTGTTGCCGGTCCCTaGGCTCGTTCACCCACACACCCCTTGCGGCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: LQQPVCMAVAGP*ARSPTHPLRLR Trigger: GCGGAGCCGCAAGGGGTGTGTGGGTGAACGAGCGCAGGGACCGGCAACAGCCATACATACCGGCTGCTGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS GCA 72 bp | GTCCATCTGGTCCAGCCTCACGCAGAGCCACAACTGTaGTGGCGCCTGGAGCTGCCAGCCCCACTGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: VHLVQPHAEPQL*WRLELPAPLQQ Trigger: CTGCTGCAGTGGGGCTGGCAGCTCCAGGCGCCAGCACAGTTGTGGCTCTGCGTGAGGCTGGACCAGATGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS GCA 72 bp | GCCAGCCCCACTGCAGCAGCCGGTATGTATGGCTGTTaGCGGTCCCTGCGCTCGTTCACCCACACACCCCTT | + |
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Preference number: 6 (lower is better) Translates to: ASPTAAAGMYGC*RSLRSFTHTPL Trigger: AAGGGGTGTGTGGGTGAACGAGCGCAGGGACCGGCAACAGCCATACATACCGGCTGCTGCAGTGGGGCTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS CCA 72 bp | TGGAGCTGCCAGCCCCACTGCAGCAGCCGGTATGTATaGCTGTTGCCGGTCCCTGCGCTCGTTCACCCACAC | + |
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Preference number: 6 (lower is better) Translates to: WSCQPHCSSRYV*LLPVPALVHPH Trigger: GTGTGGGTGAACGAGCGCAGGGACCGGCAACAGCCATACATACCGGCTGCTGCAGTGGGGCTGGCAGCTCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS CAA 72 bp | TGCCAGCCCCACTGCAGCAGCCGGTATGTATGGCTGTaGCCGGTCCCTGCGCTCGTTCACCCACACACCCCT | + |
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Preference number: 6 (lower is better) Translates to: CQPHCSSRYVWL*PVPALVHPHTP Trigger: AGGGGTGTGTGGGTGAACGAGCGCAGGGACCGGCAACAGCCATACATACCGGCTGCTGCAGTGGGGCTGGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS GCA 72 bp | ACGCAGCCGGAGTCACGCGAAGTCGGAAGTACCAGCTaGGGGAAGGAGCTGCCCACTGTGCGTCTTCTCAAC | + |
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Preference number: 6 (lower is better) Translates to: TQPESREVGSTS*GKELPTVRLLN Trigger: GTTGAGAAGACGCACAGTGGGCAGCTCCTTCCCGCAGCTGGTACTTCCGACTTCGCGTGACTCCGGCTGCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS TCA 72 bp | GCGCTGTCAGTTCCGGTCGGAGTCTGTGGCCTGGAGTaGGCACTAATGGTTCTTTTTCCAGGCCCGCCCATG | + |
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Preference number: 6 (lower is better) Translates to: ALSVPVGVCGLE*ALMVLFPGPPM Trigger: CATGGGCGGGCCTGGAAAAAGAACCATTAGTGCTCACTCCAGGCCACAGACTCCGACCGGAACTGACAGCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS CCA 72 bp | GAGCAAGTTGGACTGCATAGGGACCCACCAGTGAGATaGACGCTGTCTGTAAACGGTAGGGATGGCGGCCCG | + |
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Preference number: 6 (lower is better) Translates to: EQVGLHRDPPVR*TLSVNGRDGGP Trigger: CGGGCCGCCATCCCTACCGTTTACAGACAGCGTCCATCTCACTGGTGGGTCCCTATGCAGTCCAACTTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000657169.1 ENST00000657668.1 ENST00000658249.1 ENST00000659027.1 ENST00000670232.1 |
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| CDS GCA 72 bp | CCTTCATCCAAACAGGTGCCCACAGCAGAATCCACATaGCGTCCATCTGGTCCAGCCTCACGCAGAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: PSSKQVPTAEST*RPSGPASRRAT Trigger: TGTGGCTCTGCGTGAGGCTGGACCAGATGGACGGCATGTGGATTCTGCTGTGGGCACCTGTTTGGATGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS GCA 72 bp | AGGCGCCACCACCTTCGTTCCCTTCATCCAAACAGGTaGCCACAGCAGAATCCACATGCCGTCCATCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: RRHHLRSLHPNR*PQQNPHAVHLV Trigger: GACCAGATGGACGGCATGTGGATTCTGCTGTGGGCACCTGTTTGGATGAAGGGAACGAAGGTGGTGGCGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS GCA 72 bp | TCGGAAGTACCAGCTGCGGGAAGGAGCTGCCCACTGTaGGTCTTCTCAACTTGTTGGGACAACCTTCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: SEVPAAGRSCPL*VFSTCWDNLPA Trigger: CGCAGGAAGGTTGTCCCAACAAGTTGAGAAGACGCACAGTGGGCAGCTCCTTCCCGCAGCTGGTACTTCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS CCA 72 bp | CTGAGCCAGGGCTGTGACACTCCCTTTGGGGTTCTATaGTTCCTGGCATCTTCAAGCTTCCAGGCGCCACCA | + |
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Preference number: 6 (lower is better) Translates to: LSQGCDTPFGVL*FLASSSFQAPP Trigger: TGGTGGCGCCTGGAAGCTTGAAGATGCCAGGAACCATAGAACCCCAAAGGGAGTGTCACAGCCCTGGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS CAA 90 bp | TCCAGGTCACAGGACAGAATCGGCTACCCACATCTTTCATCAGCCTaGGCCTCAGGGATCTGCAGCTTTGCAAGTGGCAGGCACTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: SRSQDRIGYPHLSSA*ASGICSFASGRHCR Trigger: CCTACAGTGCCTGCCACTTGCAAAGCTGCAGATCCCTGAGGCCAAGGCTGATGAAAGATGTGGGTAGCCGATTCTGTCCTGTGACCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555255.1 |
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| CDS CAA 72 bp | CAGGACAGAATCGGCTACCCACATCTTTCATCAGCCTaGGCCTCAGGGATCTGCAGCTTTGCAAGTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: QDRIGYPHLSSA*ASGICSFASGR Trigger: CCTGCCACTTGCAAAGCTGCAGATCCCTGAGGCCAAGGCTGATGAAAGATGTGGGTAGCCGATTCTGTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555255.1 |
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| CDS GCA 72 bp | TACCCACATCTTTCATCAGCCTTGGCCTCAGGGATCTaGAGCTTTGCAAGTGGCAGGCACTGTAGGAGATGC | + |
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Preference number: 6 (lower is better) Translates to: YPHLSSALASGI*SFASGRHCRRC Trigger: GCATCTCCTACAGTGCCTGCCACTTGCAAAGCTGCAGATCCCTGAGGCCAAGGCTGATGAAAGATGTGGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555255.1 |
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| CDS CAA 72 bp | CAAACAGGGCTGAAACACGCTCCCTTGCTTGCCACATaGCGGGTGACGAGAAGGAGAAAAGAGCTGTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: QTGLKHAPLLAT*RVTRRRKELCS Trigger: GGAACACAGCTCTTTTCTCCTTCTCGTCACCCGCAATGTGGCAAGCAAGGGAGCGTGTTTCAGCCCTGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS GCA 72 bp | AGTACGTCCTCCTTAGACAGGGCAGACAGCCAGCCTTaGCGTAGATCTTTCCATTATCCATGGTGTCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: STSSLDRADSQP*RRSFHYPWCPS Trigger: AGAGGGACACCATGGATAATGGAAAGATCTACGGCAAGGCTGGCTGTCTGCCCTGTCTAAGGAGGACGTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000555364.6 ENST00000652797.1 ENST00000653712.1 ENST00000657169.1 ENST00000657668.1 ENST00000658249.1 ENST00000659027.1 ENST00000661202.1 ENST00000661588.1 ENST00000668781.1 ENST00000669185.1 ENST00000670232.1 |
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| CDS CCA 72 bp | TGTATTCATGGACACATCTGGATGTGCAGAGCAGGATaGTCCAGTACGTCCTCCTTAGACAGGGCAGACAGC | + |
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Preference number: 6 (lower is better) Translates to: CIHGHIWMCRAG*SSTSSLDRADS Trigger: GCTGTCTGCCCTGTCTAAGGAGGACGTACTGGACCATCCTGCTCTGCACATCCAGATGTGTCCATGAATACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000555364.6 ENST00000652797.1 ENST00000653712.1 ENST00000657169.1 ENST00000657668.1 ENST00000658249.1 ENST00000659027.1 ENST00000661202.1 ENST00000661588.1 ENST00000668781.1 ENST00000669185.1 ENST00000670232.1 |
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| CDS CAA 72 bp | GTAGGAGATGCCAACTGTTCATCATGGACCTTCATGTaGCAGCTTGGGCCCATCTTCCCCATCTCATCTCCC | + |
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Preference number: 6 (lower is better) Translates to: VGDANCSSWTFM*QLGPIFPISSP Trigger: GGGAGATGAGATGGGGAAGATGGGCCCAAGCTGCAACATGAAGGTCCATGATGAACAGTTGGCATCTCCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000555255.1 ENST00000555364.6 ENST00000652797.1 ENST00000653712.1 ENST00000657169.1 ENST00000657668.1 ENST00000658249.1 ENST00000659027.1 ENST00000661202.1 ENST00000661588.1 ENST00000668781.1 ENST00000669185.1 ENST00000670232.1 |
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| CDS GCA 72 bp | ATCTGCAGCTTTGCAAGTGGCAGGCACTGTAGGAGATaGCAACTGTTCATCATGGACCTTCATGTTGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: ICSFASGRHCRR*QLFIMDLHVAA Trigger: AGCTGCAACATGAAGGTCCATGATGAACAGTTGGCATCTCCTACAGTGCCTGCCACTTGCAAAGCTGCAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555255.1 |
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| CDS GCA 72 bp | TTTAACACAAACAGGGCTGAAACACGCTCCCTTGCTTaGCACATTGCGGGTGACGAGAAGGAGAAAAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: FNTNRAETRSLA*HIAGDEKEKRA Trigger: AGCTCTTTTCTCCTTCTCGTCACCCGCAATGTGGCAAGCAAGGGAGCGTGTTTCAGCCCTGTTTGTGTTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS GCA 72 bp | AAAGGAGAGACAACCTTCCTGCAGAAAGGAGCTACCTaGTTCAGGTCTACTGAGAGCTGTTCTGCCACTCAA | + |
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Preference number: 6 (lower is better) Translates to: KGETTFLQKGAT*FRSTESCSATQ Trigger: TTGAGTGGCAGAACAGCTCTCAGTAGACCTGAAGCAGGTAGCTCCTTTCTGCAGGAAGGTTGTCTCTCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS CAA 72 bp | AGAGCTTTAACACAAACAGGGCTGAAACACGCTCCCTaGCTTGCCACATTGCGGGTGACGAGAAGGAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: RALTQTGLKHAP*LATLRVTRRRK Trigger: TTTTCTCCTTCTCGTCACCCGCAATGTGGCAAGCAAGGGAGCGTGTTTCAGCCCTGTTTGTGTTAAAGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS CAA 90 bp | GGTACTAAAAGAGCTTTAACACAAACAGGGCTGAAACACGCTCCCTaGCTTGCCACATTGCGGGTGACGAGAAGGAGAAAAGAGCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: GTKRALTQTGLKHAP*LATLRVTRRRKELC Trigger: ACACAGCTCTTTTCTCCTTCTCGTCACCCGCAATGTGGCAAGCAAGGGAGCGTGTTTCAGCCCTGTTTGTGTTAAAGCTCTTTTAGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS GCA 72 bp | ATATGGATTCTGGCAAGTGGCAGGCACTGTAGGAGATaGCAACTGTTCATCATGGACCTTCATGTTGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: IWILASGRHCRR*QLFIMDLHVAA Trigger: AGCTGCAACATGAAGGTCCATGATGAACAGTTGGCATCTCCTACAGTGCCTGCCACTTGCCAGAATCCATAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653712.1 ENST00000658249.1 ENST00000659027.1 |
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| CDS CCA 72 bp | CTAAACTTTAGTGATGGGAGTTTGGAACAGGCATCTTaGAACAGGATATGGATTCTGGCAAGTGGCAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: LNFSDGSLEQAS*NRIWILASGRH Trigger: GTGCCTGCCACTTGCCAGAATCCATATCCTGTTCCAAGATGCCTGTTCCAAACTCCCATCACTAAAGTTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653712.1 ENST00000658249.1 ENST00000659027.1 |
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| CDS CAA 72 bp | GAGCTGTTCTGCCACTCAATAAAGCTCTTCTCCATCTaGCTAAGCCTCCATTTGTCCGCAATACCTCATCTC | + |
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Preference number: 6 (lower is better) Translates to: ELFCHSIKLFSI*LSLHLSAIPHL Trigger: GAGATGAGGTATTGCGGACAAATGGAGGCTTAGCAAGATGGAGAAGAGCTTTATTGAGTGGCAGAACAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669185.1 |
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| CDS GCA 72 bp | TTATCCATGGTGTCCCTCTTGCTCAATGATGTGCAGTaGACTCTGCAGTTGACACTGGTTTCTATCATCTGT | + |
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Preference number: 6 (lower is better) Translates to: LSMVSLLLNDVQ*TLQLTLVSIIC Trigger: ACAGATGATAGAAACCAGTGTCAACTGCAGAGTGCACTGCACATCATTGAGCAAGAGGGACACCATGGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661588.1 |
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| CDS CAA 72 bp | AGGAACTTCTCTGTTTTGTTCATTACCTTAGCTCCCTaGGCTGCATTGAACATTACCAAGTGGCAGGCACTG | + |
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Preference number: 6 (lower is better) Translates to: RNFSVLFITLAP*AALNITKWQAL Trigger: CAGTGCCTGCCACTTGGTAATGTTCAATGCAGCCAAGGGAGCTAAGGTAATGAACAAAACAGAGAAGTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000555364.6 ENST00000652797.1 ENST00000657169.1 ENST00000657668.1 ENST00000661202.1 ENST00000661588.1 ENST00000668781.1 ENST00000669185.1 |
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| CDS CAA 72 bp | TCCCTCTTGCTCAATGATGTGCAGTGCACTCTGCAGTaGACACTGGTTTCTATCATCTGTCTCCATTTGCTA | + |
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Preference number: 6 (lower is better) Translates to: SLLLNDVQCTLQ*TLVSIICLHLL Trigger: TAGCAAATGGAGACAGATGATAGAAACCAGTGTCAACTGCAGAGTGCACTGCACATCATTGAGCAAGAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661588.1 |
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| CDS CAA 90 bp | TCCCTTGGCTGCATTGAACATTACCTAAACTTTAGTGATGGGAGTTaGGAACAGGCATCTTGGAACAGGATATGGATTCTGGCTGTAAGC | + |
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Preference number: 6 (lower is better) Translates to: SLGCIEHYLNFSDGS*EQASWNRIWILAVS Trigger: GCTTACAGCCAGAATCCATATCCTGTTCCAAGATGCCTGTTCCAAACTCCCATCACTAAAGTTTAGGTAATGTTCAATGCAGCCAAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670232.1 |
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| CDS GCA 72 bp | TGCCGTAGATCTTTCCATTATCCATGGTGTCCCTCTTaGTCAATGATGTGCAGTTTCTATCATCTGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: CRRSFHYPWCPS*SMMCSFYHLSP Trigger: TGGAGACAGATGATAGAAACTGCACATCATTGAGCAAGAGGGACACCATGGATAATGGAAAGATCTACGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000555364.6 ENST00000652797.1 ENST00000653712.1 ENST00000657169.1 ENST00000657668.1 ENST00000658249.1 ENST00000659027.1 ENST00000661202.1 ENST00000668781.1 ENST00000669185.1 ENST00000670232.1 |
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| CDS CCA 72 bp | CTAAACTTTAGTGATGGGAGTTTGGAACAGGCATCTTaGAACAGGATATGGATTCTGGCTGTAAGCAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: LNFSDGSLEQAS*NRIWILAVSRG Trigger: TCCTCTGCTTACAGCCAGAATCCATATCCTGTTCCAAGATGCCTGTTCCAAACTCCCATCACTAAAGTTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670232.1 |
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| CDS CAA 72 bp | AGAATGAACATCAGGGAGGGTAGGAACTTCTCTGTTTaGTTCATTACCTTAGCTCCCTTGGCTGCATTGAAC | + |
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Preference number: 6 (lower is better) Translates to: RMNIREGRNFSV*FITLAPLAALN Trigger: GTTCAATGCAGCCAAGGGAGCTAAGGTAATGAACAAAACAGAGAAGTTCCTACCCTCCCTGATGTTCATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000555364.6 ENST00000652797.1 ENST00000653712.1 ENST00000657169.1 ENST00000657668.1 ENST00000658249.1 ENST00000659027.1 ENST00000661202.1 ENST00000661588.1 ENST00000668781.1 ENST00000669185.1 ENST00000670232.1 |
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| CDS TCA 72 bp | TGTGCAGTTTCTATCATCTGTCTCCATTTGCTAGAATaGACATCAGGGAGGGTAGGAACTTCTCTGTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: CAVSIICLHLLE*TSGRVGTSLFC Trigger: ACAAAACAGAGAAGTTCCTACCCTCCCTGATGTTCATTCTAGCAAATGGAGACAGATGATAGAAACTGCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000555364.6 ENST00000652797.1 ENST00000653712.1 ENST00000657169.1 ENST00000657668.1 ENST00000658249.1 ENST00000659027.1 ENST00000661202.1 ENST00000668781.1 ENST00000669185.1 ENST00000670232.1 |
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| CDS TCA 72 bp | ACACTGGTTTCTATCATCTGTCTCCATTTGCTAGAATaGACATCAGGGAGGGTAGGAACTTCTCTGTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: TLVSIICLHLLE*TSGRVGTSLFC Trigger: ACAAAACAGAGAAGTTCCTACCCTCCCTGATGTTCATTCTAGCAAATGGAGACAGATGATAGAAACCAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661588.1 |
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| CDS GCA 72 bp | CTTCTCTGTTTTGTTCATTACCTTAGCTCCCTTGGCTaGATTGAACATTACCTAAACTTTAGTGATGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LLCFVHYLSSLG*IEHYLNFSDGS Trigger: ACTCCCATCACTAAAGTTTAGGTAATGTTCAATGCAGCCAAGGGAGCTAAGGTAATGAACAAAACAGAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653712.1 ENST00000658249.1 ENST00000659027.1 ENST00000670232.1 |
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