Pregenerated sensors for LINC01579 (Homo sapiens)
Ensembl gene IDs: ENSG00000258754Ensembl transcript IDs: ENST00000553818.1, ENST00000554261.1, ENST00000555023.2, ENST00000555772.2, ENST00000556447.5, ENST00000556928.5, ENST00000557481.6, ENST00000557715.2, ENST00000557777.5, ENST00000653341.1, ENST00000653794.1, ENST00000657935.1, ENST00000658920.1, ENST00000660982.1, ENST00000661055.1, ENST00000664929.1, ENST00000667659.1, ENST00000669397.1
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CAGATGGACGGCATGTGGATTCTGCTGTGGGCACCCTGGCTTTGCTaGGTGCGCAGCTCTGGCGGCACCTCCCCTGGTGCAGCCGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QMDGMWILLWAPWLC*VRSSGGTSPGAAGV Trigger: GACACCGGCTGCACCAGGGGAGGTGCCGCCAGAGCTGCGCACTCAGCAAAGCCAGGGTGCCCACAGCAGAATCCACATGCCGTCCATCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000555023.2 ENST00000658920.1 ENST00000667659.1 |
||
| CDS TCA 90 bp | CCATCTCACTGGTGGGTCCCTATGCAGTCCAACTTGCTCCACGTCTaGATGTCAGTCCGGCTGCTGCAGTGGGGCTGGCAGCTCCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PSHWWVPMQSNLLHV*MSVRLLQWGWQLQA Trigger: CGCCTGGAGCTGCCAGCCCCACTGCAGCAGCCGGACTGACATTCAGACGTGGAGCAAGTTGGACTGCATAGGGACCCACCAGTGAGATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000554261.1 ENST00000555023.2 ENST00000556928.5 ENST00000557777.5 ENST00000653794.1 ENST00000657935.1 ENST00000658920.1 ENST00000660982.1 ENST00000664929.1 ENST00000667659.1 ENST00000669397.1 |
||
| CDS GCA 90 bp | ACAGACAGCGTCCATCTCACTGGTGGGTCCCTATGCAGTCCAACTTaGTCCACGTCTGAATGTCAGTCCGGCTGCTGCAGTGGGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TDSVHLTGGSLCSPT*STSECQSGCCSGAG Trigger: GCCAGCCCCACTGCAGCAGCCGGACTGACATTCAGACGTGGAGCAAGTTGGACTGCATAGGGACCCACCAGTGAGATGGACGCTGTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000554261.1 ENST00000555023.2 ENST00000556928.5 ENST00000557777.5 ENST00000653794.1 ENST00000657935.1 ENST00000658920.1 ENST00000660982.1 ENST00000664929.1 ENST00000667659.1 ENST00000669397.1 |
||
| CDS TCA 90 bp | CCATCTCACTGGTGGGTCCCTATGCAGTCCAACTTGCTCCACGTCTaGATGTCAGTCCTCCAGGCGGGTCCTGAGTTCTTGTCCTGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: PSHWWVPMQSNLLHV*MSVLQAGPEFLSCV Trigger: GACGCAGGACAAGAACTCAGGACCCGCCTGGAGGACTGACATTCAGACGTGGAGCAAGTTGGACTGCATAGGGACCCACCAGTGAGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS GCA 90 bp | TCCGCATCGTTTACAGACAGCGTCCATCTCACTGGTGGGTCCCTATaGAGTCCAACTTGCTCCACGTCTGAATGTCAGTCCGGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SASFTDSVHLTGGSL*SPTCSTSECQSGCC Trigger: GCAGCAGCCGGACTGACATTCAGACGTGGAGCAAGTTGGACTGCATAGGGACCCACCAGTGAGATGGACGCTGTCTGTAAACGATGCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557777.5 |
||
| CDS GCA 90 bp | ACAGACAGCGTCCATCTCACTGGTGGGTCCCTATGCAGTCCAACTTaGTCCACGTCTGAATGTCAGTCCTCCAGGCGGGTCCTGAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TDSVHLTGGSLCSPT*STSECQSSRRVLSS Trigger: AGAACTCAGGACCCGCCTGGAGGACTGACATTCAGACGTGGAGCAAGTTGGACTGCATAGGGACCCACCAGTGAGATGGACGCTGTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS GCA 90 bp | GGAGAACCGTTTACAGACAGCGTCCATCTCACTGGTGGGTCCCTATaGAGTCCAACTTGCTCCACGTCTGAATGTCAGTCCGGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GEPFTDSVHLTGGSL*SPTCSTSECQSGCC Trigger: GCAGCAGCCGGACTGACATTCAGACGTGGAGCAAGTTGGACTGCATAGGGACCCACCAGTGAGATGGACGCTGTCTGTAAACGGTTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653794.1 ENST00000657935.1 ENST00000667659.1 |
||
| CDS CCA 90 bp | GAAGATGCCAGGAACCATAGAACCCCAAAGGGAGTGTCACAGCCCTaGCTCAGGGAGACCCTAGGTCTGGGATCCTCAAAGGAACACAGC | + |
|
Preference number: 5 (lower is better) Translates to: EDARNHRTPKGVSQP*LRETLGLGSSKEHS Trigger: GCTGTGTTCCTTTGAGGATCCCAGACCTAGGGTCTCCCTGAGCCAGGGCTGTGACACTCCCTTTGGGGTTCTATGGTTCCTGGCATCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000554261.1 ENST00000657935.1 ENST00000660982.1 ENST00000664929.1 |
||
| CDS GCA 90 bp | ATTTCCCCGTTTACAGACAGCGTCCATCTCACTGGTGGGTCCCTATaGAGTCCAACTTGCTCCACGTCTGAATGTCAGTCCTCCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ISPFTDSVHLTGGSL*SPTCSTSECQSSRR Trigger: CCGCCTGGAGGACTGACATTCAGACGTGGAGCAAGTTGGACTGCATAGGGACCCACCAGTGAGATGGACGCTGTCTGTAAACGGGGAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS GCA 90 bp | ATTTCCCCGTTTACAGACAGCGTCCATCTCACTGGTGGGTCCCTATaGAGTCCAACTTGCTCCACGTCTGAATGTCAGTCCGGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ISPFTDSVHLTGGSL*SPTCSTSECQSGCC Trigger: GCAGCAGCCGGACTGACATTCAGACGTGGAGCAAGTTGGACTGCATAGGGACCCACCAGTGAGATGGACGCTGTCTGTAAACGGGGAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658920.1 ENST00000660982.1 ENST00000669397.1 |
||
| CDS TCA 90 bp | ATGCCTAGCCAGCTTTTCAGGCAGGCACACAAGCTCCCTGAAGAATaGTCTTCCTGCTTTTTCTGCCTGGTGTTCCCGGGTCTCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: MPSQLFRQAHKLPEE*SSCFFCLVFPGLTS Trigger: GGAGGTGAGACCCGGGAACACCAGGCAGAAAAAGCAGGAAGATCATTCTTCAGGGAGCTTGTGTGCCTGCCTGAAAAGCTGGCTAGGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000553818.1 ENST00000557481.6 |
||
| CDS GCA 90 bp | AAGTCATCGTTTACAGACAGCGTCCATCTCACTGGTGGGTCCCTATaGAGTCCAACTTGCTCCACGTCTGAATGTCAGTCCGGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KSSFTDSVHLTGGSL*SPTCSTSECQSGCC Trigger: GCAGCAGCCGGACTGACATTCAGACGTGGAGCAAGTTGGACTGCATAGGGACCCACCAGTGAGATGGACGCTGTCTGTAAACGATGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000556928.5 ENST00000664929.1 |
||
| CDS CCA 90 bp | ATGCGGCAGCTGGGACACAGCTGGTGGGTAATGAGTGCCCGGCGATaGCTCAGAACAGGAAGTGAAAAAGAAATCCAGGGTCTGGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: MRQLGHSWWVMSARR*LRTGSEKEIQGLVK Trigger: TTTCACCAGACCCTGGATTTCTTTTTCACTTCCTGTTCTGAGCCATCGCCGGGCACTCATTACCCACCAGCTGTGTCCCAGCTGCCGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000555772.2 ENST00000556447.5 |
||
| CDS CCA 90 bp | GCTACGGAGTGTGGAACAAAAGCAGGTTCCATTCTTTGGTGGCATTaGCCAGGCAAGCAGGGTGTCTGGACAGCTAAGCTTTCCCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ATECGTKAGSILWWH*PGKQGVWTAKLSQW Trigger: CCACTGGGAAAGCTTAGCTGTCCAGACACCCTGCTTGCCTGGCCAATGCCACCAAAGAATGGAACCTGCTTTTGTTCCACACTCCGTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658920.1 |
||
| CDS CCA 90 bp | GCTACGGAGTGTGGAACAAAAGCAGGTTCCATTCTTTGGTGGCATTaGCCAGGCAAGCAGGGTGTCTGGACAGCTAGGGAGAAGGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: ATECGTKAGSILWWH*PGKQGVWTAREKVT Trigger: TGTCACCTTCTCCCTAGCTGTCCAGACACCCTGCTTGCCTGGCCAATGCCACCAAAGAATGGAACCTGCTTTTGTTCCACACTCCGTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000660982.1 ENST00000661055.1 ENST00000669397.1 |
||
| CDS CCA 90 bp | CCACATAAGCAGGTGTGGCTGCTTTTTGCTGATGGCTCTTCAGAATaGTCCCTTGGTGGCATCATCCCACTGCCTCCTTTTGTCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PHKQVWLLFADGSSE*SLGGIIPLPPFVLR Trigger: CCTCAGGACAAAAGGAGGCAGTGGGATGATGCCACCAAGGGACCATTCTGAAGAGCCATCAGCAAAAAGCAGCCACACCTGCTTATGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000555023.2 ENST00000557715.2 ENST00000653341.1 ENST00000653794.1 ENST00000657935.1 ENST00000667659.1 |
||
| CDS CCA 90 bp | ACGTCACGGCTCAGATCATTTGTCCCAGAGCCACATAAGCAGGTGTaGCTGCTTTTTGCTGATGGCTCTTCAGAATGGTCCCTTGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TSRLRSFVPEPHKQV*LLFADGSSEWSLGG Trigger: GCCACCAAGGGACCATTCTGAAGAGCCATCAGCAAAAAGCAGCCACACCTGCTTATGTGGCTCTGGGACAAATGATCTGAGCCGTGACGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000555023.2 ENST00000557715.2 ENST00000653341.1 ENST00000653794.1 ENST00000657935.1 ENST00000667659.1 |
||
| CDS CCA 90 bp | GCAGGTTCCATTCTTTGGTGGCATTGGCCAGGCAAGCAGGGTGTCTaGACAGCTAGGGAGAAGGTGACAATGGGATGGAAATCAGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: AGSILWWHWPGKQGV*TAREKVTMGWKSDA Trigger: AGCATCTGATTTCCATCCCATTGTCACCTTCTCCCTAGCTGTCCAGACACCCTGCTTGCCTGGCCAATGCCACCAAAGAATGGAACCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000660982.1 ENST00000661055.1 ENST00000669397.1 |
||
| CDS CCA 90 bp | TTTCTGGCTACGGAGTGTGGAACAAAAGCAGGTTCCATTCTTTGGTaGCATTGGCCAGGCAAGCAGGGTGTCTGGACAGCTAGGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLATECGTKAGSILW*HWPGKQGVWTAREK Trigger: CTTCTCCCTAGCTGTCCAGACACCCTGCTTGCCTGGCCAATGCCACCAAAGAATGGAACCTGCTTTTGTTCCACACTCCGTAGCCAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000660982.1 ENST00000661055.1 ENST00000669397.1 |
||
| CDS TCA 90 bp | CAGCTGGTGGGTAATGAGTGCCCGGCGATGGCTCAGAACAGGAAGTaGAAAAGAAATCCAGGGTCTGGTGAAAGCTTCAAGGGAAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: QLVGNECPAMAQNRK*KRNPGSGESFKGNR Trigger: CCTGTTTCCCTTGAAGCTTTCACCAGACCCTGGATTTCTTTTTCACTTCCTGTTCTGAGCCATCGCCGGGCACTCATTACCCACCAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555772.2 ENST00000556447.5 |
||
| CDS TCA 90 bp | CCGGGTCTCACCTCCAGAAGGCTTTCCACTCTGAGTATTAACTTCTaGGTTGTCAGTGGTCTGAGCAGGACCTGGGCAGCATGTTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: PGLTSRRLSTLSINF*VVSGLSRTWAACCI Trigger: AATGCAACATGCTGCCCAGGTCCTGCTCAGACCACTGACAACTCAGAAGTTAATACTCAGAGTGGAAAGCCTTCTGGAGGTGAGACCCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CCA 90 bp | TTTCTGGCTACGGAGTGTGGAACAAAAGCAGGTTCCATTCTTTGGTaGCATTGGCCAGGCAAGCAGGGTGTCTGGACAGCTAAGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLATECGTKAGSILW*HWPGKQGVWTAKLS Trigger: GGAAAGCTTAGCTGTCCAGACACCCTGCTTGCCTGGCCAATGCCACCAAAGAATGGAACCTGCTTTTGTTCCACACTCCGTAGCCAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658920.1 |
||
| CDS GCA 90 bp | TGGAGAACCTTAGCCAAAGCCCTTAAAGCCCCAAAAGGCCAGAACTaGACCAGAGATTGGGAAACTGCAGAACGTCTGTGTGTGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: WRTLAKALKAPKGQN*TRDWETAERLCVSA Trigger: TGCAGACACACACAGACGTTCTGCAGTTTCCCAATCTCTGGTGCAGTTCTGGCCTTTTGGGGCTTTAAGGGCTTTGGCTAAGGTTCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000555023.2 ENST00000653341.1 |
||
| CDS CCA 90 bp | AAAAATCCATGCAGCATGGCCCTAGATGAACATAATCTGAAAGACTaGGCTCCACGCCTCAAGGTTGGGACAGAGAGCGAGTCTCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: KNPCSMALDEHNLKD*APRLKVGTESESPC Trigger: GCAAGGAGACTCGCTCTCTGTCCCAACCTTGAGGCGTGGAGCCCAGTCTTTCAGATTATGTTCATCTAGGGCCATGCTGCATGGATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CCA 90 bp | ATCCTGGGCTTTGCCTGGGCTTTGTGTAAGAAGACAAGGCGGAGCTaGATATTGGCTGACCAAAAAGGTGGACTGTGTCAGAGACTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ILGFAWALCKKTRRS*ILADQKGGLCQRLG Trigger: ACCTAGTCTCTGACACAGTCCACCTTTTTGGTCAGCCAATATCCAGCTCCGCCTTGTCTTCTTACACAAAGCCCAGGCAAAGCCCAGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS CCA 90 bp | CCTCAAAGGAACACAGCTCTTTTCTCCTTCTCGTCACCCGCAATGTaGCAAGCAAGGGAGCGTGTTTCAGCCCTGTTTGTGTTAAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PQRNTALFSFSSPAM*QARERVSALFVLKL Trigger: GAGCTTTAACACAAACAGGGCTGAAACACGCTCCCTTGCTTGCCACATTGCGGGTGACGAGAAGGAGAAAAGAGCTGTGTTCCTTTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657935.1 ENST00000660982.1 ENST00000664929.1 |
||
| CDS TCA 90 bp | ACATCCAGCAACCAAACACCTCTCCTTCTCTGGGAGATTCTTGATTaGAAGTCTTGGCAGAAGGCAGAGGCCTACCTCTCTGTACCGATG | + |
|
Preference number: 5 (lower is better) Translates to: TSSNQTPLLLWEILD*KSWQKAEAYLSVPM Trigger: CATCGGTACAGAGAGGTAGGCCTCTGCCTTCTGCCAAGACTTTCAATCAAGAATCTCCCAGAGAAGGAGAGGTGTTTGGTTGCTGGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS GCA 90 bp | ATTGAAAGTCTTGGCAGAAGGCAGAGGCCTACCTCTCTGTACCGATaGCCAAAGACTCCATTTCTCTCTTTTGCTGTCCCCTGGAAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: IESLGRRQRPTSLYR*PKTPFLSFAVPWKL Trigger: TAGCTTCCAGGGGACAGCAAAAGAGAGAAATGGAGTCTTTGGGCATCGGTACAGAGAGGTAGGCCTCTGCCTTCTGCCAAGACTTTCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CCA 90 bp | TGCTTGAAGCCTTCACTGAAGAATTGCTTCTGCCATAGTTCCACATaGCTGGGGAAGTTCTCACAGTCATGGTGGAGGGTGAAAGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: CLKPSLKNCFCHSST*LGKFSQSWWRVKGT Trigger: AGTGCCTTTCACCCTCCACCATGACTGTGAGAACTTCCCCAGCCATGTGGAACTATGGCAGAAGCAATTCTTCAGTGAAGGCTTCAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556928.5 |
||
| CDS CCA 90 bp | CTGACCAACAGGTTTGTACAACAGTTAGCAATCCTGGGCTTTGCCTaGGCTTTGTGTAAGAAGACAAGGCGGAGCTGGATATTGGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LTNRFVQQLAILGFA*ALCKKTRRSWILAD Trigger: GTCAGCCAATATCCAGCTCCGCCTTGTCTTCTTACACAAAGCCCAGGCAAAGCCCAGGATTGCTAACTGTTGTACAAACCTGTTGGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS GCA 90 bp | GAAGTTTGGAGGTGTTGCTTGAAGCCTTCACTGAAGAATTGCTTCTaGCATAGTTCCACATGGCTGGGGAAGTTCTCACAGTCATGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: EVWRCCLKPSLKNCF*HSSTWLGKFSQSWW Trigger: CCACCATGACTGTGAGAACTTCCCCAGCCATGTGGAACTATGGCAGAAGCAATTCTTCAGTGAAGGCTTCAAGCAACACCTCCAAACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556928.5 |
||
| CDS TCA 90 bp | ACTGAGAGATCACAGACCTTTCAGGGTTGGATAAGCCAGCTGACTTaGAATGGGGTTGAAAGCTTCCATCTAGGCCTGACCAACAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TERSQTFQGWISQLT*NGVESFHLGLTNRF Trigger: AAACCTGTTGGTCAGGCCTAGATGGAAGCTTTCAACCCCATTTCAAGTCAGCTGGCTTATCCAACCCTGAAAGGTCTGTGATCTCTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS CCA 90 bp | GCAAGCCAAATTAGTGTCACAGCGATGGCAGTGTCTGGAGGAATGTaGCTGCTAATGGAAACGGATGAATCTAAGAAAAGGGAAACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ASQISVTAMAVSGGM*LLMETDESKKRETQ Trigger: CTGGGTTTCCCTTTTCTTAGATTCATCCGTTTCCATTAGCAGCCACATTCCTCCAGACACTGCCATCGCTGTGACACTAATTTGGCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556447.5 |
||
| CDS CCA 90 bp | TCTGAGGATTTTGGTATCCCTGGGGTTCCTGGAACCAATCCCTTATaGATAATGAGGGACGACTACTTCCTGATGAAAGCTCCTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SEDFGIPGVPGTNPL*IMRDDYFLMKAPPS Trigger: TGAAGGAGGAGCTTTCATCAGGAAGTAGTCGTCCCTCATTATCCATAAGGGATTGGTTCCAGGAACCCCAGGGATACCAAAATCCTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CCA 90 bp | CAGACCGTGAGCTCCAATTCAGTGACAGAGATGATTAACTCCGTCTaGCTTGAAACGCTTGCTCATGTACTACACTTTGCTACGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QTVSSNSVTEMINSV*LETLAHVLHFATLS Trigger: GGAAAGCGTAGCAAAGTGTAGTACATGAGCAAGCGTTTCAAGCCAGACGGAGTTAATCATCTCTGTCACTGAATTGGAGCTCACGGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658920.1 ENST00000660982.1 ENST00000669397.1 |
||
| CDS CCA 90 bp | GGCAAGCAGGGTGTCTGGACAGCTAGGGAGAAGGTGACAATGGGATaGAAATCAGATGCTCACTCAGTAAATATCTGTGAGCAAGTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GKQGVWTAREKVTMG*KSDAHSVNICEQVS Trigger: ACTTACTTGCTCACAGATATTTACTGAGTGAGCATCTGATTTCCATCCCATTGTCACCTTCTCCCTAGCTGTCCAGACACCCTGCTTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000660982.1 ENST00000661055.1 ENST00000669397.1 |
||
| CDS TCA 90 bp | ACAGACCTTTCAGGGTTGGATAAGCCAGCTGACTTGAAATGGGGTTaGAAGCTTCCATCTAGGCCTGACCAACAGGTTTGTACAACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TDLSGLDKPADLKWG*KLPSRPDQQVCTTV Trigger: AACTGTTGTACAAACCTGTTGGTCAGGCCTAGATGGAAGCTTTCAACCCCATTTCAAGTCAGCTGGCTTATCCAACCCTGAAAGGTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS TCA 90 bp | CATGTACTACACTTTGCTACGCTTTCCACTCTGAGTATTAACTTCTaGGTTGTCAGTGGTCTGAGCAGGACCTGGGCAGCATGTTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: HVLHFATLSTLSINF*VVSGLSRTWAACCI Trigger: AATGCAACATGCTGCCCAGGTCCTGCTCAGACCACTGACAACTCAGAAGTTAATACTCAGAGTGGAAAGCGTAGCAAAGTGTAGTACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658920.1 ENST00000660982.1 ENST00000669397.1 |
||
| CDS GCA 90 bp | GAACTGCACCAGAGATTGGGAAACTGCAGAACGTCTGTGTGTGTCTaGAGAGGGGTTTCTCTTCTTAGCACATTCAGTGAAAGTCGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: ELHQRLGNCRTSVCV*RGVSLLSTFSESRL Trigger: TAAACGACTTTCACTGAATGTGCTAAGAAGAGAAACCCCTCTGCAGACACACACAGACGTTCTGCAGTTTCCCAATCTCTGGTGCAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555023.2 ENST00000653341.1 |
||
| CDS CCA 90 bp | GTCTTCCAGCCTCCCTGCCTGCCCAATAGCCTTCTAGTAATGACTTaGAACCTGTCTGTCTTGCATGTGATTAAGAACACAGGTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VFQPPCLPNSLLVMT*NLSVLHVIKNTGSF Trigger: AAAAGAACCTGTGTTCTTAATCACATGCAAGACAGACAGGTTCCAAGTCATTACTAGAAGGCTATTGGGCAGGCAGGGAGGCTGGAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CCA 90 bp | CAGACCGTGAGCTCCAATTCAGTGACAGAGATGATTAACTCCGTCTaGCTTGAAACGCTTGCTCATGTACTACACTTTGCTACGCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QTVSSNSVTEMINSV*LETLAHVLHFATLK Trigger: TTTCAGCGTAGCAAAGTGTAGTACATGAGCAAGCGTTTCAAGCCAGACGGAGTTAATCATCTCTGTCACTGAATTGGAGCTCACGGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661055.1 |
||
| CDS TCA 90 bp | CTCTTCACTGGGAGAAGAGATAATGTCTGTTTTCAGATCTATTCATaGAATACCAGACTTGGCAGAGCAGCCTCCCTGGAGAACCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LFTGRRDNVCFQIYS*NTRLGRAASLENLS Trigger: GCTAAGGTTCTCCAGGGAGGCTGCTCTGCCAAGTCTGGTATTTCATGAATAGATCTGAAAACAGACATTATCTCTTCTCCCAGTGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555023.2 ENST00000653341.1 |
||
| CDS GCA 90 bp | GAGATAGTAACTGCACCAAGATCTCACAACTGGGGTAAAAATCCATaGAGCATGGCCCTAGATGAACATAATCTGAAAGACTGGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: EIVTAPRSHNWGKNP*SMALDEHNLKDWAP Trigger: TGGAGCCCAGTCTTTCAGATTATGTTCATCTAGGGCCATGCTGCATGGATTTTTACCCCAGTTGTGAGATCTTGGTGCAGTTACTATCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS GCA 90 bp | ATGAGCACAGGTAATAGGGTTGTCTTTTCCCACAATTCTTGGGGGTaGTATTCATATCCTAGTCTTGGTGAAGGATCCTTCCTGGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: MSTGNRVVFSHNSWG*YSYPSLGEGSFLEV Trigger: AACCTCCAGGAAGGATCCTTCACCAAGACTAGGATATGAATAGCACCCCCAAGAATTGTGGGAAAAGACAACCCTATTACCTGTGCTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CCA 90 bp | TGGCTGCTAATGGAAACGGATGAATCTAAGAAAAGGGAAACCCAGTaGAGAAGTGGTGGGTATAGGATCAAGGATCCAGTAGATTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: WLLMETDESKKRETQ*RSGGYRIKDPVDSS Trigger: TGAGGAATCTACTGGATCCTTGATCCTATACCCACCACTTCTCCACTGGGTTTCCCTTTTCTTAGATTCATCCGTTTCCATTAGCAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556447.5 |
||
| CDS CCA 90 bp | TTGTCTCTCTGTTTTGGGAGGAGTGCCAGAGAAGGCTCAATACAATaGACTTTACTGCATCTAAGTTCCACGTCACGGCTCAGATCATTT | + |
|
Preference number: 5 (lower is better) Translates to: LSLCFGRSAREGSIQ*TLLHLSSTSRLRSF Trigger: AAATGATCTGAGCCGTGACGTGGAACTTAGATGCAGTAAAGTCCATTGTATTGAGCCTTCTCTGGCACTCCTCCCAAAACAGAGAGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000555023.2 ENST00000653341.1 ENST00000653794.1 ENST00000657935.1 ENST00000667659.1 |
||
| CDS TCA 90 bp | CTCTTCACTGGGAGAAGAGATAATGTCTGTTTTCAGATCTATTCATaGAATACCAGACTTGGCAGAGCAGCCTCCCTGGAGAACCGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LFTGRRDNVCFQIYS*NTRLGRAASLENRL Trigger: TAAACGGTTCTCCAGGGAGGCTGCTCTGCCAAGTCTGGTATTTCATGAATAGATCTGAAAACAGACATTATCTCTTCTCCCAGTGAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000557715.2 ENST00000653794.1 ENST00000657935.1 ENST00000667659.1 |
||
| CDS TCA 90 bp | AGTCACCCACTCCTTTTGATCCCTGCAAACTTTTACCGAGAGCTTTaGAACAGGTTGCTGAGCACTTCCCATATTGAATCTGTGCATACT | + |
|
Preference number: 5 (lower is better) Translates to: SHPLLLIPANFYREL*NRLLSTSHIESVHT Trigger: AGTATGCACAGATTCAATATGGGAAGTGCTCAGCAACCTGTTTCAAAGCTCTCGGTAAAAGTTTGCAGGGATCAAAAGGAGTGGGTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS TCA 90 bp | CAAGAATTGGCCATTTGCAAGCAGAGGCCTGTTTATAAAAAGAACTaGGAGATCACAGACCTTTCAGGGTTGGATAAGCCAGCTGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: QELAICKQRPVYKKN*EITDLSGLDKPADL Trigger: CAAGTCAGCTGGCTTATCCAACCCTGAAAGGTCTGTGATCTCTCAGTTCTTTTTATAAACAGGCCTCTGCTTGCAAATGGCCAATTCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS CCA 90 bp | CAAATTCAAGGCTGGAGGATCACTGGGAGATCTACAGATGAAACTTaGTTACAATTCCTCCTAAGGACTGGGCCTCTTCTCATTCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: QIQGWRITGRSTDET*LQFLLRTGPLLIHS Trigger: AGAATGAATGAGAAGAGGCCCAGTCCTTAGGAGGAATTGTAACCAAGTTTCATCTGTAGATCTCCCAGTGATCCTCCAGCCTTGAATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557777.5 |
||
| CDS CCA 90 bp | CCCCTGGAAGCTAGAACATGTTCTCATAGTCTGTGGTTAGCCCATTaGATGTTTTCTTCTGGGATAGTGATTCTTAAGCAACTCGCACAA | + |
|
Preference number: 5 (lower is better) Translates to: PLEARTCSHSLWLAH*MFSSGIVILKQLAQ Trigger: TTGTGCGAGTTGCTTAAGAATCACTATCCCAGAAGAAAACATCCAATGGGCTAACCACAGACTATGAGAACATGTTCTAGCTTCCAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CCA 90 bp | GCAAGCAGGGTGTCTGGACAGCTAAGCTTTCCCAGTGGTGATGTGTaGAATCAAGTTGAAAAGGTAGAAAAGAGGTTAAAGGAAACACAT | + |
|
Preference number: 5 (lower is better) Translates to: ASRVSGQLSFPSGDV*NQVEKVEKRLKETH Trigger: ATGTGTTTCCTTTAACCTCTTTTCTACCTTTTCAACTTGATTCCACACATCACCACTGGGAAAGCTTAGCTGTCCAGACACCCTGCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658920.1 |
||
| CDS TCA 90 bp | TGGAGAAGTGGTGGGTATAGGATCAAGGATCCAGTAGATTCCTCATaGAGAATATGCAGGTTGAAAGCAGAAGTGGAGCAGAATTATCAC | + |
|
Preference number: 5 (lower is better) Translates to: WRSGGYRIKDPVDSS*RICRLKAEVEQNYH Trigger: GTGATAATTCTGCTCCACTTCTGCTTTCAACCTGCATATTCTTCATGAGGAATCTACTGGATCCTTGATCCTATACCCACCACTTCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556447.5 |
||
| CDS TCA 90 bp | CTTTTACCGAGAGCTTTGAAACAGGTTGCTGAGCACTTCCCATATTaGATCTGTGCATACTCTGGTTTCTTACAAGGTCACGTGAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLPRALKQVAEHFPY*ICAYSGFLQGHVKD Trigger: ATCCTTCACGTGACCTTGTAAGAAACCAGAGTATGCACAGATTCAATATGGGAAGTGCTCAGCAACCTGTTTCAAAGCTCTCGGTAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CCA 90 bp | GATTCCAGTTGGCTTCAGGTTAAATTTATACCTTCACAGGCAGTCTaGCTCTTCCTAAAGAAGTTGCTAGTTGTCCACTCTTCTGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: DSSWLQVKFIPSQAV*LFLKKLLVVHSSGL Trigger: AAGACCAGAAGAGTGGACAACTAGCAACTTCTTTAGGAAGAGCCAGACTGCCTGTGAAGGTATAAATTTAACCTGAAGCCAACTGGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS TCA 90 bp | ACAATTCCTCCTAAGGACTGGGCCTCTTCTCATTCATTCTTATCCTaGCTACATTGTGTTGAATCTTCCTATTGTTCAATTTCCGCATCG | + |
|
Preference number: 5 (lower is better) Translates to: TIPPKDWASSHSFLS*LHCVESSYCSISAS Trigger: CGATGCGGAAATTGAACAATAGGAAGATTCAACACAATGTAGTCAGGATAAGAATGAATGAGAAGAGGCCCAGTCCTTAGGAGGAATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557777.5 |
||
| CDS CCA 90 bp | AATTGTCCTGTGCTGCTATACAGAGATCATGGACATTCAAGGCCATaGTCTACATATACACTCTTTGACATTGATAAGTTGCTCACGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NCPVLLYRDHGHSRP*STYTLFDIDKLLTS Trigger: AGACGTGAGCAACTTATCAATGTCAAAGAGTGTATATGTAGACCATGGCCTTGAATGTCCATGATCTCTGTATAGCAGCACAGGACAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CCA 90 bp | ACGTCTCCTATTTTTCTACAAAATAGTGCAGGTCTTTATGGGTATTaGTTTGTTGCTCATTTGTTTGTTGAGGACATCCAGCAACCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TSPIFLQNSAGLYGY*FVAHLFVEDIQQPN Trigger: GTTTGGTTGCTGGATGTCCTCAACAAACAAATGAGCAACAAACCAATACCCATAAAGACCTGCACTATTTTGTAGAAAAATAGGAGACGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CCA 90 bp | CCTTTCATAAAGTATTACAAGAAAGAGATGAGCTCAGGCAAGAATTaGCCATTTGCAAGCAGAGGCCTGTTTATAAAAAGAACTGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PFIKYYKKEMSSGKN*PFASRGLFIKRTER Trigger: TCTCTCAGTTCTTTTTATAAACAGGCCTCTGCTTGCAAATGGCCAATTCTTGCCTGAGCTCATCTCTTTCTTGTAATACTTTATGAAAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS TCA 90 bp | GAGATTCATGCTATACATTGCGAAACATTTGGTAAAAAGGTCTACTaGCCTTTGGGCCAGTTGGTTGGAAAAATTTATGCATTAGTTACT | + |
|
Preference number: 5 (lower is better) Translates to: EIHAIHCETFGKKVY*PLGQLVGKIYALVT Trigger: AGTAACTAATGCATAAATTTTTCCAACCAACTGGCCCAAAGGTCAGTAGACCTTTTTACCAAATGTTTCGCAATGTATAGCATGAATCTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS GCA 90 bp | ATTCAAGGCCATGGTCTACATATACACTCTTTGACATTGATAAGTTaGTCACGTCTCCTATTTTTCTACAAAATAGTGCAGGTCTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: IQGHGLHIHSLTLIS*SRLLFFYKIVQVFM Trigger: CATAAAGACCTGCACTATTTTGTAGAAAAATAGGAGACGTGAGCAACTTATCAATGTCAAAGAGTGTATATGTAGACCATGGCCTTGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CCA 72 bp | GCTGTGGGCACCCTGGCTTTGCTGAGTGCGCAGCTCTaGCGGCACCTCCCCTGGTGCAGCCGGTGTCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: AVGTLALLSAQL*RHLPWCSRCLC Trigger: GCAAAGACACCGGCTGCACCAGGGGAGGTGCCGCCAGAGCTGCGCACTCAGCAAAGCCAGGGTGCCCACAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000555023.2 ENST00000658920.1 ENST00000667659.1 |
||
| CDS CAA 90 bp | GGACCAGATGGACGGCATGTGGATTCTGCTGTGGGCACCCTGGCTTaGCTGAGTGCGCAGCTCTGGCGGCACCTCCCCTGGTGCAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GPDGRHVDSAVGTLA*LSAQLWRHLPWCSR Trigger: CCGGCTGCACCAGGGGAGGTGCCGCCAGAGCTGCGCACTCAGCAAAGCCAGGGTGCCCACAGCAGAATCCACATGCCGTCCATCTGGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000555023.2 ENST00000658920.1 ENST00000667659.1 |
||
| CDS CCA 72 bp | CAGTGGGGCTGGCAGCTCCAGGCGCCAGCACAGTTGTaGCTCTGCGTGAGGCTGGACCAGATGGACGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: QWGWQLQAPAQL*LCVRLDQMDGM Trigger: CATGCCGTCCATCTGGTCCAGCCTCACGCAGAGCCACAACTGTGCTGGCGCCTGGAGCTGCCAGCCCCACTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000554261.1 ENST00000555023.2 ENST00000556928.5 ENST00000557777.5 ENST00000653794.1 ENST00000657935.1 ENST00000658920.1 ENST00000660982.1 ENST00000664929.1 ENST00000667659.1 ENST00000669397.1 |
||
| CDS CAA 72 bp | GGACGGCATGTGGATTCTGCTGTGGGCACCCTGGCTTaGCTGAGTGCGCAGCTCTGGCGGCACCTCCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GRHVDSAVGTLA*LSAQLWRHLPW Trigger: CCAGGGGAGGTGCCGCCAGAGCTGCGCACTCAGCAAAGCCAGGGTGCCCACAGCAGAATCCACATGCCGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000555023.2 ENST00000658920.1 ENST00000667659.1 |
||
| CDS TCA 72 bp | GGCATGTGGATTCTGCTGTGGGCACCCTGGCTTTGCTaGGTGCGCAGCTCTGGCGGCACCTCCCCTGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GMWILLWAPWLC*VRSSGGTSPGA Trigger: TGCACCAGGGGAGGTGCCGCCAGAGCTGCGCACTCAGCAAAGCCAGGGTGCCCACAGCAGAATCCACATGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000555023.2 ENST00000658920.1 ENST00000667659.1 |
||
| CDS TCA 72 bp | GGCAGCTCCAGGCGCCAGCACAGTTGTGGCTCTGCGTaGGGCTGGACCAGATGGACGGCATGTGGATTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GSSRRQHSCGSA*GWTRWTACGFC Trigger: GCAGAATCCACATGCCGTCCATCTGGTCCAGCCTCACGCAGAGCCACAACTGTGCTGGCGCCTGGAGCTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000554261.1 ENST00000555023.2 ENST00000556928.5 ENST00000557777.5 ENST00000653794.1 ENST00000657935.1 ENST00000658920.1 ENST00000660982.1 ENST00000664929.1 ENST00000667659.1 ENST00000669397.1 |
||
| CDS GCA 72 bp | GGCTGGCAGCTCCAGGCGCCAGCACAGTTGTGGCTCTaGGTGAGGCTGGACCAGATGGACGGCATGTGGATT | + |
|
Preference number: 6 (lower is better) Translates to: GWQLQAPAQLWL*VRLDQMDGMWI Trigger: AATCCACATGCCGTCCATCTGGTCCAGCCTCACGCAGAGCCACAACTGTGCTGGCGCCTGGAGCTGCCAGCC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000554261.1 ENST00000555023.2 ENST00000556928.5 ENST00000557777.5 ENST00000653794.1 ENST00000657935.1 ENST00000658920.1 ENST00000660982.1 ENST00000664929.1 ENST00000667659.1 ENST00000669397.1 |
||
| CDS TCA 72 bp | TGGTGGGTCCCTATGCAGTCCAACTTGCTCCACGTCTaGATGTCAGTCCGGCTGCTGCAGTGGGGCTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: WWVPMQSNLLHV*MSVRLLQWGWQ Trigger: CTGCCAGCCCCACTGCAGCAGCCGGACTGACATTCAGACGTGGAGCAAGTTGGACTGCATAGGGACCCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000554261.1 ENST00000555023.2 ENST00000556928.5 ENST00000557777.5 ENST00000653794.1 ENST00000657935.1 ENST00000658920.1 ENST00000660982.1 ENST00000664929.1 ENST00000667659.1 ENST00000669397.1 |
||
| CDS CCA 72 bp | CCTAGTCTTGGTGAAGGATCCTTCCTGGAGGTTTGCTaGTGCACAGCCAGCTCAGCTCCGGGCAGCAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PSLGEGSFLEVC*CTASSAPGSSL Trigger: GAGGCTGCTGCCCGGAGCTGAGCTGGCTGTGCACCAGCAAACCTCCAGGAAGGATCCTTCACCAAGACTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CCA 72 bp | TGGCTCTGCGTGAGGCTGGACCAGATGGACGGCATGTaGATTCTGCTGTGGGCACCTGAAGCAGGTAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WLCVRLDQMDGM*ILLWAPEAGSS Trigger: GGAGCTACCTGCTTCAGGTGCCCACAGCAGAATCCACATGCCGTCCATCTGGTCCAGCCTCACGCAGAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653794.1 |
||
| CDS CAA 72 bp | TTCTGCTGTGGGCACCTCCAGGCGGGTCCTGAGTTCTaGTCCTGCGTCCAGGGAGATGAGGTATTGCGGACA | + |
|
Preference number: 6 (lower is better) Translates to: FCCGHLQAGPEF*SCVQGDEVLRT Trigger: TGTCCGCAATACCTCATCTCCCTGGACGCAGGACAAGAACTCAGGACCCGCCTGGAGGTGCCCACAGCAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669397.1 |
||
| CDS TCA 72 bp | GTCTCTCCTTTCCGCAGGAAGGTTGTCCCAACAAGTTaGGAAGACGCACAGTGGGCAGCTCCTTCCCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VSPFRRKVVPTS*EDAQWAAPSRS Trigger: GCTGCGGGAAGGAGCTGCCCACTGTGCGTCTTCTCAACTTGTTGGGACAACCTTCCTGCGGAAAGGAGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000557481.6 ENST00000653794.1 ENST00000657935.1 ENST00000660982.1 ENST00000664929.1 ENST00000669397.1 |
||
| CDS GCA 72 bp | GTCCATCTCACTGGTGGGTCCCTATGCAGTCCAACTTaGTCCACGTCTGAATGTCAGTCCTCCAGGCGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: VHLTGGSLCSPT*STSECQSSRRV Trigger: GACCCGCCTGGAGGACTGACATTCAGACGTGGAGCAAGTTGGACTGCATAGGGACCCACCAGTGAGATGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS TCA 72 bp | TGGTGGGTCCCTATGCAGTCCAACTTGCTCCACGTCTaGATGTCAGTCCTCCAGGCGGGTCCTGAGTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: WWVPMQSNLLHV*MSVLQAGPEFL Trigger: CAAGAACTCAGGACCCGCCTGGAGGACTGACATTCAGACGTGGAGCAAGTTGGACTGCATAGGGACCCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS GCA 72 bp | GTCCATCTCACTGGTGGGTCCCTATGCAGTCCAACTTaGTCCACGTCTGAATGTCAGTCCGGCTGCTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VHLTGGSLCSPT*STSECQSGCCS Trigger: ACTGCAGCAGCCGGACTGACATTCAGACGTGGAGCAAGTTGGACTGCATAGGGACCCACCAGTGAGATGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000554261.1 ENST00000555023.2 ENST00000556928.5 ENST00000557777.5 ENST00000653794.1 ENST00000657935.1 ENST00000658920.1 ENST00000660982.1 ENST00000664929.1 ENST00000667659.1 ENST00000669397.1 |
||
| CDS CCA 72 bp | CCCTGGAGAACCGTTTACAGACAGCGTCCATCTCACTaGTGGGTCCCTATGCAGTCCAACTTGCTCCACGTC | + |
|
Preference number: 6 (lower is better) Translates to: PWRTVYRQRPSH*WVPMQSNLLHV Trigger: GACGTGGAGCAAGTTGGACTGCATAGGGACCCACCAGTGAGATGGACGCTGTCTGTAAACGGTTCTCCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000557715.2 ENST00000653794.1 ENST00000657935.1 ENST00000667659.1 |
||
| CDS CCA 72 bp | AGGAACCATAGAACCCCAAAGGGAGTGTCACAGCCCTaGCTCAGGGAGACCCTAGGTCTGGGATCCTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RNHRTPKGVSQP*LRETLGLGSSK Trigger: CTTTGAGGATCCCAGACCTAGGGTCTCCCTGAGCCAGGGCTGTGACACTCCCTTTGGGGTTCTATGGTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000554261.1 ENST00000657935.1 ENST00000660982.1 ENST00000664929.1 |
||
| CDS CCA 72 bp | AGGCTGGACCAGATGGACGGCATGTGGATTCTGCTGTaGGCACCTGTTTGGATGAAGGGAACGAAGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RLDQMDGMWILL*APVWMKGTKVV Trigger: CACCACCTTCGTTCCCTTCATCCAAACAGGTGCCCACAGCAGAATCCACATGCCGTCCATCTGGTCCAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000554261.1 ENST00000657935.1 ENST00000660982.1 ENST00000664929.1 |
||
| CDS CAA 72 bp | GAAACAGGAGGCAGCAGCGTGAAACACACCGGCATGTaGCTGCGGTGTCAGTCCCGCAAAACATTCAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: ETGGSSVKHTGM*LRCQSRKTFRP Trigger: GGGTCTGAATGTTTTGCGGGACTGACACCGCAGCAACATGCCGGTGTGTTTCACGCTGCTGCCTCCTGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555772.2 ENST00000556447.5 |
||
| CDS CAA 90 bp | GCTTCAAGGGAAACAGGAGGCAGCAGCGTGAAACACACCGGCATGTaGCTGCGGTGTCAGTCCCGCAAAACATTCAGACCCCCTTCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: ASRETGGSSVKHTGM*LRCQSRKTFRPPSQ Trigger: TTGAGAAGGGGGTCTGAATGTTTTGCGGGACTGACACCGCAGCAACATGCCGGTGTGTTTCACGCTGCTGCCTCCTGTTTCCCTTGAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000555772.2 ENST00000556447.5 |
||
| CDS TCA 72 bp | CAGCAGCCTCTGTGGACTCAGCGCAGGCTCACTATGTaGATCCTCTTCTTTTCTCCTGACAGTGCTCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QQPLWTQRRLTM*ILFFSPDSAPR Trigger: CCTGGGAGCACTGTCAGGAGAAAAGAAGAGGATTCACATAGTGAGCCTGCGCTGAGTCCACAGAGGCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CCA 72 bp | GCCCTGCCAAGTTGGAAGAGCGGCAGCTTAAAGAGATaGGAGCGCCATCCCTTGAAATGGCGGAAACAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: ALPSWKSGSLKR*ERHPLKWRKQE Trigger: TTCCTGTTTCCGCCATTTCAAGGGATGGCGCTCCCATCTCTTTAAGCTGCCGCTCTTCCAACTTGGCAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS CAA 72 bp | TGGATGAAGGGAACGAAGGTGGTGGCGCCTGGAAGCTaGAAGATGCCAGGAACCATAGAACCCCAAAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: WMKGTKVVAPGS*KMPGTIEPQRE Trigger: CTCCCTTTGGGGTTCTATGGTTCCTGGCATCTTCAAGCTTCCAGGCGCCACCACCTTCGTTCCCTTCATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000554261.1 ENST00000657935.1 ENST00000660982.1 ENST00000664929.1 |
||
| CDS CAA 72 bp | AAGAGCGGCAGCTTAAAGAGATGGGAGCGCCATCCCTaGAAATGGCGGAAACAGGAAGCGGAGATGCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: KSGSLKRWERHP*KWRKQEAEMPL Trigger: CAGAGGCATCTCCGCTTCCTGTTTCCGCCATTTCAAGGGATGGCGCTCCCATCTCTTTAAGCTGCCGCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS CCA 72 bp | ACCTGTTTGGATGAAGGGAACGAAGGTGGTGGCGCCTaGAAGCTTGAAGATGCCAGGAACCATAGAACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TCLDEGNEGGGA*KLEDARNHRTP Trigger: TGGGGTTCTATGGTTCCTGGCATCTTCAAGCTTCCAGGCGCCACCACCTTCGTTCCCTTCATCCAAACAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000554261.1 ENST00000657935.1 ENST00000660982.1 ENST00000664929.1 |
||
| CDS CCA 72 bp | TGCAGCATGGCCCTAGATGAACATAATCTGAAAGACTaGGCTCCACGCCTCAAGGTTGGGACAGAGAGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: CSMALDEHNLKD*APRLKVGTESE Trigger: CTCGCTCTCTGTCCCAACCTTGAGGCGTGGAGCCCAGTCTTTCAGATTATGTTCATCTAGGGCCATGCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CCA 72 bp | ACGGAGTGTGGAACAAAAGCAGGTTCCATTCTTTGGTaGCATTGGCCAGGCAAGCAGGGTGTCTGGACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TECGTKAGSILW*HWPGKQGVWTA Trigger: AGCTGTCCAGACACCCTGCTTGCCTGGCCAATGCCACCAAAGAATGGAACCTGCTTTTGTTCCACACTCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000658920.1 ENST00000660982.1 ENST00000661055.1 ENST00000669397.1 |
||
| CDS CCA 72 bp | TGTGGAACAAAAGCAGGTTCCATTCTTTGGTGGCATTaGCCAGGCAAGCAGGGTGTCTGGACAGCTAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: CGTKAGSILWWH*PGKQGVWTARE Trigger: CTCCCTAGCTGTCCAGACACCCTGCTTGCCTGGCCAATGCCACCAAAGAATGGAACCTGCTTTTGTTCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000660982.1 ENST00000661055.1 ENST00000669397.1 |
||
| CDS TCA 72 bp | GCGCAGGCTCACTATGTGAATCCTCTTCTTTTCTCCTaGCAGTGCTCCCAGGTGAATGCTGCTATCAACCCC | + |
|
Preference number: 6 (lower is better) Translates to: AQAHYVNPLLFS*QCSQVNAAINP Trigger: GGGGTTGATAGCAGCATTCACCTGGGAGCACTGTCAGGAGAAAAGAAGAGGATTCACATAGTGAGCCTGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS TCA 72 bp | GTCCTAGGCCTTCACATTCACTCACCACTCACTCACTaGCTCACCCAGAGTAACTTCCGGTCCTTCAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VLGLHIHSPLTH*LTQSNFRSFKL Trigger: GAGCTTGAAGGACCGGAAGTTACTCTGGGTGAGTCAGTGAGTGAGTGGTGAGTGAATGTGAAGGCCTAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS TCA 72 bp | GAATCCTGGATCTGCCAGTGTCTGAGGTTGGACAAGTaGCTTAGCCATCGAGGCTTCCTTTCCACTCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ESWICQCLRLDK*LSHRGFLSTQH Trigger: GTGCTGAGTGGAAAGGAAGCCTCGATGGCTAAGTCACTTGTCCAACCTCAGACACTGGCAGATCCAGGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000658920.1 ENST00000660982.1 ENST00000661055.1 ENST00000669397.1 |
||
| CDS GCA 72 bp | TTTACAGACAGCGTCCATCTCACTGGTGGGTCCCTATaGAGTCCAACTTGCTCCACGTCTGAATGTCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FTDSVHLTGGSL*SPTCSTSECQS Trigger: GGACTGACATTCAGACGTGGAGCAAGTTGGACTGCATAGGGACCCACCAGTGAGATGGACGCTGTCTGTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000554261.1 ENST00000555023.2 ENST00000556928.5 ENST00000557481.6 ENST00000557715.2 ENST00000557777.5 ENST00000653341.1 ENST00000653794.1 ENST00000657935.1 ENST00000658920.1 ENST00000660982.1 ENST00000664929.1 ENST00000667659.1 ENST00000669397.1 |
||
| CDS GCA 72 bp | CCCAAAAGGCCAGAACTGCACCAGAGATTGGGAAACTaGAGAACGTCTGTGTGTGTCTGCAGAGGGGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PKRPELHQRLGN*RTSVCVCRGVS Trigger: AGAAACCCCTCTGCAGACACACACAGACGTTCTGCAGTTTCCCAATCTCTGGTGCAGTTCTGGCCTTTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000555023.2 ENST00000653341.1 |
||
| CDS CCA 72 bp | CAGGTGTGGCTGCTTTTTGCTGATGGCTCTTCAGAATaGTCCCTTGGTGGCATCATCCCACTGCCTCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: QVWLLFADGSSE*SLGGIIPLPPF Trigger: AAAAGGAGGCAGTGGGATGATGCCACCAAGGGACCATTCTGAAGAGCCATCAGCAAAAAGCAGCCACACCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000555023.2 ENST00000557715.2 ENST00000653341.1 ENST00000653794.1 ENST00000657935.1 ENST00000667659.1 |
||
| CDS CCA 72 bp | AATTTCCGCATCGTTTACAGACAGCGTCCATCTCACTaGTGGGTCCCTATGCAGTCCAACTTGCTCCACGTC | + |
|
Preference number: 6 (lower is better) Translates to: NFRIVYRQRPSH*WVPMQSNLLHV Trigger: GACGTGGAGCAAGTTGGACTGCATAGGGACCCACCAGTGAGATGGACGCTGTCTGTAAACGATGCGGAAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557777.5 |
||
| CDS CCA 72 bp | AACACAGCTCTTTTCTCCTTCTCGTCACCCGCAATGTaGCAAGCAAGGGAGCGTGTTTCAGCCCTGTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: NTALFSFSSPAM*QARERVSALFV Trigger: CACAAACAGGGCTGAAACACGCTCCCTTGCTTGCCACATTGCGGGTGACGAGAAGGAGAAAAGAGCTGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000554261.1 ENST00000657935.1 ENST00000660982.1 ENST00000664929.1 |
||
| CDS CCA 72 bp | CTAGAAGTCATCGTTTACAGACAGCGTCCATCTCACTaGTGGGTCCCTATGCAGTCCAACTTGCTCCACGTC | + |
|
Preference number: 6 (lower is better) Translates to: LEVIVYRQRPSH*WVPMQSNLLHV Trigger: GACGTGGAGCAAGTTGGACTGCATAGGGACCCACCAGTGAGATGGACGCTGTCTGTAAACGATGACTTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000556928.5 ENST00000664929.1 |
||
| CDS CCA 72 bp | TCAGTGAAAGTCGTTTACAGACAGCGTCCATCTCACTaGTGGGTCCCTATGCAGTCCAACTTGCTCCACGTC | + |
|
Preference number: 6 (lower is better) Translates to: SVKVVYRQRPSH*WVPMQSNLLHV Trigger: GACGTGGAGCAAGTTGGACTGCATAGGGACCCACCAGTGAGATGGACGCTGTCTGTAAACGACTTTCACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555023.2 ENST00000653341.1 |
||
| CDS CAA 90 bp | GGCTTTGCCTGGGCTTTGTGTAAGAAGACAAGGCGGAGCTGGATATaGGCTGACCAAAAAGGTGGACTGTGTCAGAGACTAGGTAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GFAWALCKKTRRSWI*ADQKGGLCQRLGSC Trigger: GCAACTACCTAGTCTCTGACACAGTCCACCTTTTTGGTCAGCCAATATCCAGCTCCGCCTTGTCTTCTTACACAAAGCCCAGGCAAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS TCA 72 bp | ACCTCCAGAAGGCTTTCCACTCTGAGTATTAACTTCTaGGTTGTCAGTGGTCTGAGCAGGACCTGGGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: TSRRLSTLSINF*VVSGLSRTWAA Trigger: TGCTGCCCAGGTCCTGCTCAGACCACTGACAACTCAGAAGTTAATACTCAGAGTGGAAAGCCTTCTGGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS GCA 72 bp | GTTGTCAGTGGTCTGAGCAGGACCTGGGCAGCATGTTaGATTTTCAGCAGTTGCAGGAGGACATCTTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: VVSGLSRTWAAC*IFSSCRRTSFH Trigger: ATGGAAAGATGTCCTCCTGCAACTGCTGAAAATGCAACATGCTGCCCAGGTCCTGCTCAGACCACTGACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000557481.6 ENST00000658920.1 ENST00000660982.1 ENST00000661055.1 ENST00000669397.1 |
||
| CDS CCA 72 bp | ATAAATTTCCCCGTTTACAGACAGCGTCCATCTCACTaGTGGGTCCCTATGCAGTCCAACTTGCTCCACGTC | + |
|
Preference number: 6 (lower is better) Translates to: INFPVYRQRPSH*WVPMQSNLLHV Trigger: GACGTGGAGCAAGTTGGACTGCATAGGGACCCACCAGTGAGATGGACGCTGTCTGTAAACGGGGAAATTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000557481.6 ENST00000658920.1 ENST00000660982.1 ENST00000669397.1 |
||
| CDS CCA 72 bp | CCTTCACTGAAGAATTGCTTCTGCCATAGTTCCACATaGCTGGGGAAGTTCTCACAGTCATGGTGGAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PSLKNCFCHSST*LGKFSQSWWRV Trigger: CACCCTCCACCATGACTGTGAGAACTTCCCCAGCCATGTGGAACTATGGCAGAAGCAATTCTTCAGTGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556928.5 |
||
| CDS CCA 72 bp | AGGCTGGACCAGATGGACGGCATGTGGATTCTGCTGTaGGCACATTTAAAGGTCTCATTCAAGGTAGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RLDQMDGMWILL*AHLKVSFKVGQ Trigger: CTGACCTACCTTGAATGAGACCTTTAAATGTGCCCACAGCAGAATCCACATGCCGTCCATCTGGTCCAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556928.5 |
||
| CDS CCA 72 bp | TGTGGAACAAAAGCAGGTTCCATTCTTTGGTGGCATTaGCCAGGCAAGCAGGGTGTCTGGACAGCTAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: CGTKAGSILWWH*PGKQGVWTAKL Trigger: AAGCTTAGCTGTCCAGACACCCTGCTTGCCTGGCCAATGCCACCAAAGAATGGAACCTGCTTTTGTTCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658920.1 |
||
| CDS CAA 72 bp | AGTTGTCAGTGGTCTGAGCAGGACCTGGGCAGCATGTaGCATTTTCAGCAGTTGCAGGAGGACATCTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SCQWSEQDLGSM*HFQQLQEDIFP Trigger: TGGAAAGATGTCCTCCTGCAACTGCTGAAAATGCAACATGCTGCCCAGGTCCTGCTCAGACCACTGACAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000557481.6 ENST00000658920.1 ENST00000660982.1 ENST00000661055.1 ENST00000669397.1 |
||
| CDS TCA 72 bp | GGTAATGAGTGCCCGGCGATGGCTCAGAACAGGAAGTaGAAAAGAAATCCAGGGTCTGGTGAAAGCTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GNECPAMAQNRK*KRNPGSGESFK Trigger: CTTGAAGCTTTCACCAGACCCTGGATTTCTTTTTCACTTCCTGTTCTGAGCCATCGCCGGGCACTCATTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555772.2 ENST00000556447.5 |
||
| CDS TCA 72 bp | CTAAATCTTTCATATCAGAATCCAAGGTGGGTAGTCTaGTTCTCTTCATTTCCGCCGGGTGCAGGGCGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LNLSYQNPRWVV*FSSFPPGAGRH Trigger: GTGGCGCCCTGCACCCGGCGGAAATGAAGAGAATCAGACTACCCACCTTGGATTCTGATATGAAAGATTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555772.2 ENST00000556447.5 |
||
| CDS TCA 72 bp | CAGCAACCAAACACCTCTCCTTCTCTGGGAGATTCTTaGTTGAAAGTCTTGGCAGAAGGCAGAGGCCTACCT | + |
|
Preference number: 6 (lower is better) Translates to: QQPNTSPSLGDS*LKVLAEGRGLP Trigger: AGGTAGGCCTCTGCCTTCTGCCAAGACTTTCAATCAAGAATCTCCCAGAGAAGGAGAGGTGTTTGGTTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS TCA 72 bp | TCACAGACCTTTCAGGGTTGGATAAGCCAGCTGACTTaGAATGGGGTTGAAAGCTTCCATCTAGGCCTGACC | + |
|
Preference number: 6 (lower is better) Translates to: SQTFQGWISQLT*NGVESFHLGLT Trigger: GGTCAGGCCTAGATGGAAGCTTTCAACCCCATTTCAAGTCAGCTGGCTTATCCAACCCTGAAAGGTCTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS TCA 72 bp | CACTTTGCTACGCTTTCCACTCTGAGTATTAACTTCTaGGTTGTCAGTGGTCTGAGCAGGACCTGGGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: HFATLSTLSINF*VVSGLSRTWAA Trigger: TGCTGCCCAGGTCCTGCTCAGACCACTGACAACTCAGAAGTTAATACTCAGAGTGGAAAGCGTAGCAAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658920.1 ENST00000660982.1 ENST00000669397.1 |
||
| CDS TCA 72 bp | GCCTTTACTCACCTTTCCACTCTGAGTATTAACTTCTaGGTTGTCAGTGGTCTGAGCAGGACCTGGGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: AFTHLSTLSINF*VVSGLSRTWAA Trigger: TGCTGCCCAGGTCCTGCTCAGACCACTGACAACTCAGAAGTTAATACTCAGAGTGGAAAGGTGAGTAAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661055.1 |
||
| CDS GCA 72 bp | TTACGCTCCAACTGCAGAAACCTGTCAATTGATGAATaGCTAGCCAGCTTTTCAGGCAGGCACACAAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LRSNCRNLSIDE*LASFSGRHTSS Trigger: GGAGCTTGTGTGCCTGCCTGAAAAGCTGGCTAGGCATTCATCAATTGACAGGTTTCTGCAGTTGGAGCGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CCA 72 bp | GGCTGGAGGATCACTGGGAGATCTACAGATGAAACTTaGTTACAATTCCTCCTAAGGACTGGGCCTCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GWRITGRSTDET*LQFLLRTGPLL Trigger: GAGAAGAGGCCCAGTCCTTAGGAGGAATTGTAACCAAGTTTCATCTGTAGATCTCCCAGTGATCCTCCAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557777.5 |
||
| CDS CCA 72 bp | TTGACTTGTAGCAATCACACAGTGGGTAGGTTCATCTaGCTCCAAATTTTAGGCTCTGCATGCCCAGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LTCSNHTVGRFI*LQILGSACPEA Trigger: GGCCTCTGGGCATGCAGAGCCTAAAATTTGGAGCCAGATGAACCTACCCACTGTGTGATTGCTACAAGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553818.1 |
||
| CDS CCA 72 bp | TTTGCCTGGGCTTTGTGTAAGAAGACAAGGCGGAGCTaGATATTGGCTGACCAAAAAGGTGGACTGTGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: FAWALCKKTRRS*ILADQKGGLCQ Trigger: CTGACACAGTCCACCTTTTTGGTCAGCCAATATCCAGCTCCGCCTTGTCTTCTTACACAAAGCCCAGGCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS CAA 72 bp | GTACAACAGTTAGCAATCCTGGGCTTTGCCTGGGCTTaGTGTAAGAAGACAAGGCGGAGCTGGATATTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VQQLAILGFAWA*CKKTRRSWILA Trigger: AGCCAATATCCAGCTCCGCCTTGTCTTCTTACACAAAGCCCAGGCAAAGCCCAGGATTGCTAACTGTTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS TCA 72 bp | TCAGGGTTGGATAAGCCAGCTGACTTGAAATGGGGTTaGAAGCTTCCATCTAGGCCTGACCAACAGGTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SGLDKPADLKWG*KLPSRPDQQVC Trigger: ACAAACCTGTTGGTCAGGCCTAGATGGAAGCTTTCAACCCCATTTCAAGTCAGCTGGCTTATCCAACCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS GCA 72 bp | GCAGTGTTTGTTAGCATAGCTCTGTCAATTGATGAATaGCTAGCCAGCTTTTCAGGCAGGCACACAAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AVFVSIALSIDE*LASFSGRHTSS Trigger: GGAGCTTGTGTGCCTGCCTGAAAAGCTGGCTAGGCATTCATCAATTGACAGAGCTATGCTAACAAACACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553818.1 |
||
| CDS GCA 72 bp | AGGTGTTGCTTGAAGCCTTCACTGAAGAATTGCTTCTaGCATAGTTCCACATGGCTGGGGAAGTTCTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: RCCLKPSLKNCF*HSSTWLGKFSQ Trigger: CTGTGAGAACTTCCCCAGCCATGTGGAACTATGGCAGAAGCAATTCTTCAGTGAAGGCTTCAAGCAACACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556928.5 |
||
| CDS GCA 72 bp | GTTTGGAGGTGTTGCTTGAAGCCTTCACTGAAGAATTaGTTCTGCCATAGTTCCACATGGCTGGGGAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: VWRCCLKPSLKN*FCHSSTWLGKF Trigger: GAACTTCCCCAGCCATGTGGAACTATGGCAGAAGCAATTCTTCAGTGAAGGCTTCAAGCAACACCTCCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556928.5 |
||
| CDS CCA 72 bp | AGGTTTGTACAACAGTTAGCAATCCTGGGCTTTGCCTaGGCTTTGTGTAAGAAGACAAGGCGGAGCTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: RFVQQLAILGFA*ALCKKTRRSWI Trigger: TATCCAGCTCCGCCTTGTCTTCTTACACAAAGCCCAGGCAAAGCCCAGGATTGCTAACTGTTGTACAAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS CCA 72 bp | TGTTTTGGGAGGAGTGCCAGAGAAGGCTCAATACAATaGACTTTACTGCATCTAAGTTCCACGTCACGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: CFGRSAREGSIQ*TLLHLSSTSRL Trigger: GAGCCGTGACGTGGAACTTAGATGCAGTAAAGTCCATTGTATTGAGCCTTCTCTGGCACTCCTCCCAAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000555023.2 ENST00000653341.1 ENST00000653794.1 ENST00000657935.1 ENST00000667659.1 |
||
| CDS CAA 72 bp | TCCACGCCTCAAGGTTGGGACAGAGAGCGAGTCTCCTaGCTCAGGTTTTATCTCTTGTTAGTTAGATGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: STPQGWDRERVS*LRFYLLLVRCQ Trigger: TTGGCATCTAACTAACAAGAGATAAAACCTGAGCAAGGAGACTCGCTCTCTGTCCCAACCTTGAGGCGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CAA 72 bp | TGGGCTTTGTGTAAGAAGACAAGGCGGAGCTGGATATaGGCTGACCAAAAAGGTGGACTGTGTCAGAGACTA | + |
|
Preference number: 6 (lower is better) Translates to: WALCKKTRRSWI*ADQKGGLCQRL Trigger: TAGTCTCTGACACAGTCCACCTTTTTGGTCAGCCAATATCCAGCTCCGCCTTGTCTTCTTACACAAAGCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS CAA 90 bp | CTACAGTACCGCTTCCCAGATGTGTCAGAAGTTTGGAGGTGTTGCTaGAAGCCTTCACTGAAGAATTGCTTCTGCCATAGTTCCACATGG | + |
|
Preference number: 6 (lower is better) Translates to: LQYRFPDVSEVWRCC*KPSLKNCFCHSSTW Trigger: CCATGTGGAACTATGGCAGAAGCAATTCTTCAGTGAAGGCTTCAAGCAACACCTCCAAACTTCTGACACATCTGGGAAGCGGTACTGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556928.5 |
||
| CDS CAA 90 bp | AGACTGGGCTCCACGCCTCAAGGTTGGGACAGAGAGCGAGTCTCCTaGCTCAGGTTTTATCTCTTGTTAGTTAGATGCCAAATACATTTT | + |
|
Preference number: 6 (lower is better) Translates to: RLGSTPQGWDRERVS*LRFYLLLVRCQIHF Trigger: AAAATGTATTTGGCATCTAACTAACAAGAGATAAAACCTGAGCAAGGAGACTCGCTCTCTGTCCCAACCTTGAGGCGTGGAGCCCAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CAA 90 bp | AACAGGTTTGTACAACAGTTAGCAATCCTGGGCTTTGCCTGGGCTTaGTGTAAGAAGACAAGGCGGAGCTGGATATTGGCTGACCAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: NRFVQQLAILGFAWA*CKKTRRSWILADQK Trigger: TTTTTGGTCAGCCAATATCCAGCTCCGCCTTGTCTTCTTACACAAAGCCCAGGCAAAGCCCAGGATTGCTAACTGTTGTACAAACCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS TCA 72 bp | TGGTGGGTCCCTATGCAGTCCAACTTGCTCCACGTCTaGATGTCAGTCCTAGATACAAAGCAGAGAAGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: WWVPMQSNLLHV*MSVLDTKQRSL Trigger: TAAACTTCTCTGCTTTGTATCTAGGACTGACATTCAGACGTGGAGCAAGTTGGACTGCATAGGGACCCACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557715.2 ENST00000653341.1 |
||
| CDS GCA 72 bp | TACCGCTTCCCAGATGTGTCAGAAGTTTGGAGGTGTTaGTTGAAGCCTTCACTGAAGAATTGCTTCTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: YRFPDVSEVWRC*LKPSLKNCFCH Trigger: ATGGCAGAAGCAATTCTTCAGTGAAGGCTTCAAGCAACACCTCCAAACTTCTGACACATCTGGGAAGCGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000556447.5 ENST00000556928.5 |
||
| CDS GCA 72 bp | AAGATTCAGAGCATTCCAGGGAGATTACGCTCCAACTaGAGAAACCTGTCAATTGATGAATGCCTAGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KIQSIPGRLRSN*RNLSIDECLAS Trigger: GCTGGCTAGGCATTCATCAATTGACAGGTTTCTGCAGTTGGAGCGTAATCTCCCTGGAATGCTCTGAATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CCA 72 bp | CCTCCCTGCCTGCCCAATAGCCTTCTAGTAATGACTTaGAACCTGTCTGTCTTGCATGTGATTAAGAACACA | + |
|
Preference number: 6 (lower is better) Translates to: PPCLPNSLLVMT*NLSVLHVIKNT Trigger: TGTGTTCTTAATCACATGCAAGACAGACAGGTTCCAAGTCATTACTAGAAGGCTATTGGGCAGGCAGGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CCA 72 bp | CATCATAGGCAAAGGGACCAGCTAACAGCAAGGACCTaGGCAAGTTCAAGAAGCAGAAAATGTTCCAAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HHRQRDQLTART*ASSRSRKCSKG Trigger: TCCTTTGGAACATTTTCTGCTTCTTGAACTTGCCCAGGTCCTTGCTGTTAGCTGGTCCCTTTGCCTATGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS CCA 72 bp | GAAAAACATTCTCCTTCTTCAAATAGTTGGAGCAGGTaGTGTGGGAGAGTGGCTAACAGTGTGGCATTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: EKHSPSSNSWSR*CGRVANSVALG Trigger: TCCCAATGCCACACTGTTAGCCACTCTCCCACACCACCTGCTCCAACTATTTGAAGAAGGAGAATGTTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000653794.1 ENST00000657935.1 ENST00000667659.1 |
||
| CDS CAA 72 bp | CGCTTCCCAGATGTGTCAGAAGTTTGGAGGTGTTGCTaGAAGCCTTCACTGAAGAATTGCTTCTGCCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: RFPDVSEVWRCC*KPSLKNCFCHL Trigger: AAGATGGCAGAAGCAATTCTTCAGTGAAGGCTTCAAGCAACACCTCCAAACTTCTGACACATCTGGGAAGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556447.5 |
||
| CDS CAA 72 bp | AGCTCTACAGTACCGCTTCCCAGATGTGTCAGAAGTTaGGAGGTGTTGCTTGAAGCCTTCACTGAAGAATTG | + |
|
Preference number: 6 (lower is better) Translates to: SSTVPLPRCVRS*EVLLEAFTEEL Trigger: CAATTCTTCAGTGAAGGCTTCAAGCAACACCTCCAAACTTCTGACACATCTGGGAAGCGGTACTGTAGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000556447.5 ENST00000556928.5 |
||
| CDS CAA 72 bp | CGCTTCCCAGATGTGTCAGAAGTTTGGAGGTGTTGCTaGAAGCCTTCACTGAAGAATTGCTTCTGCCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: RFPDVSEVWRCC*KPSLKNCFCHS Trigger: ACTATGGCAGAAGCAATTCTTCAGTGAAGGCTTCAAGCAACACCTCCAAACTTCTGACACATCTGGGAAGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556928.5 |
||
| CDS TCA 72 bp | AAGTGGAGCAGAATTATCACTAAAAGGGCAGTCTCCTaGGCAGTGAGTCAAGAAGGAAAACCAGGGAGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: KWSRIITKRAVS*AVSQEGKPGSQ Trigger: TTGACTCCCTGGTTTTCCTTCTTGACTCACTGCTCAGGAGACTGCCCTTTTAGTGATAATTCTGCTCCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556447.5 |
||
| CDS TCA 72 bp | GGTGGGTATAGGATCAAGGATCCAGTAGATTCCTCATaGAGAATATGCAGGTTGAAAGCAGAAGTGGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GGYRIKDPVDSS*RICRLKAEVEQ Trigger: CTGCTCCACTTCTGCTTTCAACCTGCATATTCTTCATGAGGAATCTACTGGATCCTTGATCCTATACCCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556447.5 |
||
| CDS CCA 72 bp | ATTAGTGTCACAGCGATGGCAGTGTCTGGAGGAATGTaGCTGCTAATGGAAACGGATGAATCTAAGAAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ISVTAMAVSGGM*LLMETDESKKR Trigger: CCTTTTCTTAGATTCATCCGTTTCCATTAGCAGCCACATTCCTCCAGACACTGCCATCGCTGTGACACTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556447.5 |
||
| CDS CCA 72 bp | TGTCCCCTGGAAGCTAGAACATGTTCTCATAGTCTGTaGTTAGCCCATTGGATGTTTTCTTCTGGGATAGTG | + |
|
Preference number: 6 (lower is better) Translates to: CPLEARTCSHSL*LAHWMFSSGIV Trigger: CACTATCCCAGAAGAAAACATCCAATGGGCTAACCACAGACTATGAGAACATGTTCTAGCTTCCAGGGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CAA 72 bp | ACAAATGGAGGCTTAGCAAGATGGAGAAGAGCTTTATaGAGTGGCAGAACAGCTCTCAGTAGACCTGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: TNGGLARWRRAL*SGRTALSRPEA Trigger: TGCTTCAGGTCTACTGAGAGCTGTTCTGCCACTCAATAAAGCTCTTCTCCATCTTGCTAAGCCTCCATTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000557481.6 ENST00000657935.1 ENST00000660982.1 ENST00000664929.1 ENST00000669397.1 |
||
| CDS CAA 90 bp | CTACAGTACCGCTTCCCAGATGTGTCAGAAGTTTGGAGGTGTTGCTaGAAGCCTTCACTGAAGAATTGCTTCTGCCATCTTTATCTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LQYRFPDVSEVWRCC*KPSLKNCFCHLYLR Trigger: TCTTAGATAAAGATGGCAGAAGCAATTCTTCAGTGAAGGCTTCAAGCAACACCTCCAAACTTCTGACACATCTGGGAAGCGGTACTGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556447.5 |
||
| CDS TCA 72 bp | CTGCAAACTTTTACCGAGAGCTTTGAAACAGGTTGCTaGGCACTTCCCATATTGAATCTGTGCATACTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LQTFTESFETGC*ALPILNLCILW Trigger: CCAGAGTATGCACAGATTCAATATGGGAAGTGCTCAGCAACCTGTTTCAAAGCTCTCGGTAAAAGTTTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS TCA 72 bp | GCTTTACCCCTGACAAGTGGTGAAAGCTTAGTTTGTTaGTTCCTGATCTACAGCAAGGATCAGATGAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: ALPLTSGESLVC*FLIYSKDQMRP Trigger: TGGTCTCATCTGATCCTTGCTGTAGATCAGGAATCAACAAACTAAGCTTTCACCACTTGTCAGGGGTAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653794.1 ENST00000657935.1 ENST00000667659.1 |
||
| CDS GCA 72 bp | ACTGCACCAAGATCTCACAACTGGGGTAAAAATCCATaGAGCATGGCCCTAGATGAACATAATCTGAAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: TAPRSHNWGKNP*SMALDEHNLKD Trigger: GTCTTTCAGATTATGTTCATCTAGGGCCATGCTGCATGGATTTTTACCCCAGTTGTGAGATCTTGGTGCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CCA 72 bp | AGCACAGGTAATAGGGTTGTCTTTTCCCACAATTCTTaGGGGTGCTATTCATATCCTAGTCTTGGTGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: STGNRVVFSHNS*GCYSYPSLGEG Trigger: TCCTTCACCAAGACTAGGATATGAATAGCACCCCCAAGAATTGTGGGAAAAGACAACCCTATTACCTGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CCA 72 bp | AGCTCCAATTCAGTGACAGAGATGATTAACTCCGTCTaGCTTGAAACGCTTGCTCATGTACTACACTTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSNSVTEMINSV*LETLAHVLHFA Trigger: AGCAAAGTGTAGTACATGAGCAAGCGTTTCAAGCCAGACGGAGTTAATCATCTCTGTCACTGAATTGGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000658920.1 ENST00000660982.1 ENST00000661055.1 ENST00000669397.1 |
||
| CDS TCA 72 bp | AGAGCTTTGAAACAGGTTGCTGAGCACTTCCCATATTaGATCTGTGCATACTCTGGTTTCTTACAAGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: RALKQVAEHFPY*ICAYSGFLQGH Trigger: GTGACCTTGTAAGAAACCAGAGTATGCACAGATTCAATATGGGAAGTGCTCAGCAACCTGTTTCAAAGCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS TCA 72 bp | CTCCTTTTGATCCCTGCAAACTTTTACCGAGAGCTTTaGAACAGGTTGCTGAGCACTTCCCATATTGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: LLLIPANFYREL*NRLLSTSHIES Trigger: AGATTCAATATGGGAAGTGCTCAGCAACCTGTTTCAAAGCTCTCGGTAAAAGTTTGCAGGGATCAAAAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CAA 72 bp | GTCTTTATGGGTATTGGTTTGTTGCTCATTTGTTTGTaGAGGACATCCAGCAACCAAACACCTCTCCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VFMGIGLLLICL*RTSSNQTPLLL Trigger: GAGAAGGAGAGGTGTTTGGTTGCTGGATGTCCTCAACAAACAAATGAGCAACAAACCAATACCCATAAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CAA 72 bp | CAGGTCTTTATGGGTATTGGTTTGTTGCTCATTTGTTaGTTGAGGACATCCAGCAACCAAACACCTCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: QVFMGIGLLLIC*LRTSSNQTPLL Trigger: AAGGAGAGGTGTTTGGTTGCTGGATGTCCTCAACAAACAAATGAGCAACAAACCAATACCCATAAAGACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CAA 90 bp | AGGACTGGGCCTCTTCTCATTCATTCTTATCCTGACTACATTGTGTaGAATCTTCCTATTGTTCAATTTCCGCATCGTTTACAGACAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RTGPLLIHSYPDYIV*NLPIVQFPHRLQTA Trigger: CGCTGTCTGTAAACGATGCGGAAATTGAACAATAGGAAGATTCAACACAATGTAGTCAGGATAAGAATGAATGAGAAGAGGCCCAGTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557777.5 |
||
| CDS CAA 90 bp | TGTGTCAGAAGTTTGGAGGTGTTGCTTGAAGCCTTCACTGAAGAATaGCTTCTGCCATCTTTATCTAAGAGTTTGCCAGTGAGTCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: CVRSLEVLLEAFTEE*LLPSLSKSLPVSHL Trigger: AAGATGACTCACTGGCAAACTCTTAGATAAAGATGGCAGAAGCAATTCTTCAGTGAAGGCTTCAAGCAACACCTCCAAACTTCTGACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556447.5 |
||
| CDS TCA 72 bp | ATACATGAAGTAATTGAGAAACTCAGAGGGGCTCATTaGCTTGTAGCAATCACACAGTGGGTAGGTTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: IHEVIEKLRGAH*LVAITQWVGSS Trigger: AGATGAACCTACCCACTGTGTGATTGCTACAAGTCAATGAGCCCCTCTGAGTTTCTCAATTACTTCATGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553818.1 |
||
| CDS CAA 72 bp | ATACCTTCACAGGCAGTCTGGCTCTTCCTAAAGAAGTaGCTAGTTGTCCACTCTTCTGGTCTTTCTTTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: IPSQAVWLFLKK*LVVHSSGLSLK Trigger: TTTTAAAGAAAGACCAGAAGAGTGGACAACTAGCAACTTCTTTAGGAAGAGCCAGACTGCCTGTGAAGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CAA 72 bp | GAAAGATGGAGATTCATGCTATACATTGCGAAACATTaGGTAAAAAGGTCTACTGACCTTTGGGCCAGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: ERWRFMLYIAKH*VKRSTDLWASW Trigger: CCAACTGGCCCAAAGGTCAGTAGACCTTTTTACCAAATGTTTCGCAATGTATAGCATGAATCTCCATCTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS CAA 90 bp | CAGAGAGGAGAAAGATGGAGATTCATGCTATACATTGCGAAACATTaGGTAAAAAGGTCTACTGACCTTTGGGCCAGTTGGTTGGAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: QRGERWRFMLYIAKH*VKRSTDLWASWLEK Trigger: TTTTTCCAACCAACTGGCCCAAAGGTCAGTAGACCTTTTTACCAAATGTTTCGCAATGTATAGCATGAATCTCCATCTTTCTCCTCTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS TCA 72 bp | AATGCTGCTATCAACCCCATTTTACAACGTGGAAACTaGAGAATTGAGATAGTAACTGCACCAAGATCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: NAAINPILQRGN*RIEIVTAPRSH Trigger: GTGAGATCTTGGTGCAGTTACTATCTCAATTCTTCAGTTTCCACGTTGTAAAATGGGGTTGATAGCAGCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CCA 72 bp | GCTAGAACATGTTCTCATAGTCTGTGGTTAGCCCATTaGATGTTTTCTTCTGGGATAGTGATTCTTAAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: ARTCSHSLWLAH*MFSSGIVILKQ Trigger: TTGCTTAAGAATCACTATCCCAGAAGAAAACATCCAATGGGCTAACCACAGACTATGAGAACATGTTCTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CAA 90 bp | CTATTTTTCTACAAAATAGTGCAGGTCTTTATGGGTATTGGTTTGTaGCTCATTTGTTTGTTGAGGACATCCAGCAACCAAACACCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LFFYKIVQVFMGIGL*LICLLRTSSNQTPL Trigger: GAGAGGTGTTTGGTTGCTGGATGTCCTCAACAAACAAATGAGCAACAAACCAATACCCATAAAGACCTGCACTATTTTGTAGAAAAATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS TCA 72 bp | CCTAAGGACTGGGCCTCTTCTCATTCATTCTTATCCTaGCTACATTGTGTTGAATCTTCCTATTGTTCAATT | + |
|
Preference number: 6 (lower is better) Translates to: PKDWASSHSFLS*LHCVESSYCSI Trigger: AATTGAACAATAGGAAGATTCAACACAATGTAGTCAGGATAAGAATGAATGAGAAGAGGCCCAGTCCTTAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557777.5 |
||
| CDS TCA 72 bp | ATGGAAAAAGTATCCTGTTTTTCAGAACAATTGCCCTaGGAATTGTTCCATGTGTGTCCAGGTTTGTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: MEKVSCFSEQLP*ELFHVCPGLFV Trigger: CACAAACAAACCTGGACACACATGGAACAATTCTCAGGGCAATTGTTCTGAAAAACAGGATACTTTTTCCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS TCA 72 bp | GCTATACATTGCGAAACATTTGGTAAAAAGGTCTACTaGCCTTTGGGCCAGTTGGTTGGAAAAATTTATGCA | + |
|
Preference number: 6 (lower is better) Translates to: AIHCETFGKKVY*PLGQLVGKIYA Trigger: TGCATAAATTTTTCCAACCAACTGGCCCAAAGGTCAGTAGACCTTTTTACCAAATGTTTCGCAATGTATAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS GCA 72 bp | CTACTGACCTTTGGGCCAGTTGGTTGGAAAAATTTATaGATTAGTTACTACTGGCTGCCTTTCATAAAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: LLTFGPVGWKNL*ISYYWLPFIKY Trigger: ATACTTTATGAAAGGCAGCCAGTAGTAACTAATGCATAAATTTTTCCAACCAACTGGCCCAAAGGTCAGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS CAA 72 bp | AATAGCCTTCTAGTAATGACTTGGAACCTGTCTGTCTaGCATGTGATTAAGAACACAGGTTCTTTTCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: NSLLVMTWNLSV*HVIKNTGSFLP Trigger: AGGAAGAAAAGAACCTGTGTTCTTAATCACATGCAAGACAGACAGGTTCCAAGTCATTACTAGAAGGCTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CAA 72 bp | ATGGACATTCAAGGCCATGGTCTACATATACACTCTTaGACATTGATAAGTTGCTCACGTCTCCTATTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: MDIQGHGLHIHS*TLISCSRLLFF Trigger: GAAAAATAGGAGACGTGAGCAACTTATCAATGTCAAAGAGTGTATATGTAGACCATGGCCTTGAATGTCCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CAA 72 bp | AAAGTATTACAAGAAAGAGATGAGCTCAGGCAAGAATaGGCCATTTGCAAGCAGAGGCCTGTTTATAAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: KVLQERDELRQE*AICKQRPVYKK Trigger: CTTTTTATAAACAGGCCTCTGCTTGCAAATGGCCAATTCTTGCCTGAGCTCATCTCTTTCTTGTAATACTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||
| CDS CAA 90 bp | ATCATGGACATTCAAGGCCATGGTCTACATATACACTCTTTGACATaGATAAGTTGCTCACGTCTCCTATTTTTCTACAAAATAGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: IMDIQGHGLHIHSLT*ISCSRLLFFYKIVQ Trigger: CTGCACTATTTTGTAGAAAAATAGGAGACGTGAGCAACTTATCAATGTCAAAGAGTGTATATGTAGACCATGGCCTTGAATGTCCATGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CAA 90 bp | CATTCAAGGCCATGGTCTACATATACACTCTTTGACATTGATAAGTaGCTCACGTCTCCTATTTTTCTACAAAATAGTGCAGGTCTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: HSRPWSTYTLFDIDK*LTSPIFLQNSAGLY Trigger: ATAAAGACCTGCACTATTTTGTAGAAAAATAGGAGACGTGAGCAACTTATCAATGTCAAAGAGTGTATATGTAGACCATGGCCTTGAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CAA 90 bp | ACAGAGATCATGGACATTCAAGGCCATGGTCTACATATACACTCTTaGACATTGATAAGTTGCTCACGTCTCCTATTTTTCTACAAAATA | + |
|
Preference number: 6 (lower is better) Translates to: TEIMDIQGHGLHIHS*TLISCSRLLFFYKI Trigger: TATTTTGTAGAAAAATAGGAGACGTGAGCAACTTATCAATGTCAAAGAGTGTATATGTAGACCATGGCCTTGAATGTCCATGATCTCTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS GCA 72 bp | ATGCATTTCAAAGAACACATCCCTGTCATTAAGCAGTaGCCGACTTTATGTGTAACCTTTGAAAGAAATAAA | + |
|
Preference number: 6 (lower is better) Translates to: MHFKEHIPVIKQ*PTLCVTFERNK Trigger: TTTATTTCTTTCAAAGGTTACACATAAAGTCGGGCACTGCTTAATGACAGGGATGTGTTCTTTGAAATGCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CAA 72 bp | CCATGGTCTACATATACACTCTTTGACATTGATAAGTaGCTCACGTCTCCTATTTTTCTACAAAATAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PWSTYTLFDIDK*LTSPIFLQNSA Trigger: TGCACTATTTTGTAGAAAAATAGGAGACGTGAGCAACTTATCAATGTCAAAGAGTGTATATGTAGACCATGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS CAA 72 bp | ATTCAAGGCCATGGTCTACATATACACTCTTTGACATaGATAAGTTGCTCACGTCTCCTATTTTTCTACAAA | + |
|
Preference number: 6 (lower is better) Translates to: IQGHGLHIHSLT*ISCSRLLFFYK Trigger: TTTGTAGAAAAATAGGAGACGTGAGCAACTTATCAATGTCAAAGAGTGTATATGTAGACCATGGCCTTGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557481.6 |
||
| CDS GCA 72 bp | AGTTGTACTAGTGTTAGTCAATCAAGTATTTGTAGTTaGTGTTCCTACAACGATTTTAACTGCTACTGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: SCTSVSQSSICS*CSYNDFNCYCN Trigger: GTTACAGTAGCAGTTAAAATCGTTGTAGGAACAGCAACTACAAATACTTGATTGACTAACACTAGTACAACT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653341.1 |
||
| CDS CCA 72 bp | CCAGTTGGTTGGAAAAATTTATGCATTAGTTACTACTaGCTGCCTTTCATAAAGTATTACAAGAAAGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: PVGWKNLCISYY*LPFIKYYKKEM Trigger: CATCTCTTTCTTGTAATACTTTATGAAAGGCAGCCAGTAGTAACTAATGCATAAATTTTTCCAACCAACTGG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555772.2 |
||