Pregenerated sensors for LINC01574 (Homo sapiens)

Ensembl gene IDs: ENSG00000248859

Ensembl transcript IDs: ENST00000512115.2

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TTCCGGGGAGCAGGCCTCGCAGGCCCCCTTCACGCTGCGCATGTTTaGCGGGATAAACGCCGAATGCCTCTTAAGCGCACTAATTTGCCG	+
Preference number: 5 (lower is better) Translates to: FRGAGLAGPLHAAHV*RDKRRMPLKRTNLP Trigger: CGGCAAATTAGTGCGCTTAAGAGGCATTCGGCGTTTATCCCGGCAAACATGCGCAGCGTGAAGGGGGCCTGCGAGGCCTGCTCCCCGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000512115.2
CDS CCA 90 bp	TTAAGCGCACTAATTTGCCGTTGTCGTGCTGGTAAACAGGCCTCCTaGAAAGGGGCCACTCGCCGCTTCTGTACCCAAGGCGGACAGCGG	+
Preference number: 5 (lower is better) Translates to: LSALICRCRAGKQAS*KGATRRFCTQGGQR Trigger: CCGCTGTCCGCCTTGGGTACAGAAGCGGCGAGTGGCCCCTTTCCAGGAGGCCTGTTTACCAGCACGACAACGGCAAATTAGTGCGCTTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512115.2
CDS GCA 90 bp	ATGTTTGCCGGGATAAACGCCGAATGCCTCTTAAGCGCACTAATTTaGCGTTGTCGTGCTGGTAAACAGGCCTCCTGGAAAGGGGCCACT	+
Preference number: 5 (lower is better) Translates to: MFAGINAECLLSALI*RCRAGKQASWKGAT Trigger: AGTGGCCCCTTTCCAGGAGGCCTGTTTACCAGCACGACAACGGCAAATTAGTGCGCTTAAGAGGCATTCGGCGTTTATCCCGGCAAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512115.2
CDS CCA 72 bp	CTAATTTGCCGTTGTCGTGCTGGTAAACAGGCCTCCTaGAAAGGGGCCACTCGCCGCTTCTGTACCCAAGGC	+
Preference number: 6 (lower is better) Translates to: LICRCRAGKQAS*KGATRRFCTQG Trigger: GCCTTGGGTACAGAAGCGGCGAGTGGCCCCTTTCCAGGAGGCCTGTTTACCAGCACGACAACGGCAAATTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512115.2
CDS GCA 72 bp	GGGATAAACGCCGAATGCCTCTTAAGCGCACTAATTTaGCGTTGTCGTGCTGGTAAACAGGCCTCCTGGAAA	+
Preference number: 6 (lower is better) Translates to: GINAECLLSALI*RCRAGKQASWK Trigger: TTTCCAGGAGGCCTGTTTACCAGCACGACAACGGCAAATTAGTGCGCTTAAGAGGCATTCGGCGTTTATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512115.2

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