Pregenerated sensors for LINC01572 (Homo sapiens)
Ensembl gene IDs: ENSG00000261008Ensembl transcript IDs: ENST00000561611.2, ENST00000563770.5, ENST00000563823.6, ENST00000570035.5, ENST00000570152.2, ENST00000624829.4, ENST00000653104.1, ENST00000655530.1, ENST00000656218.1, ENST00000657725.1, ENST00000659470.1, ENST00000661899.1, ENST00000662171.1, ENST00000664155.1, ENST00000664779.1, ENST00000666555.1, ENST00000668081.1, ENST00000669279.1
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCAAGCAGCAACCGAAGGCGCAAGTGCCAGGATTACAGCCTAGGCTaGTCCAACTATGAGCCCTTCCTCGGACCCTGGGACTCGGCTACT | + |
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Preference number: 5 (lower is better) Translates to: ASSNRRRKCQDYSLG*SNYEPFLGPWDSAT Trigger: AGTAGCCGAGTCCCAGGGTCCGAGGAAGGGCTCATAGTTGGAGCAGCCTAGGCTGTAATCCTGGCACTTGCGCCTTCGGTTGCTGCTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000561611.2 ENST00000656218.1 |
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| CDS GCA 90 bp | CAGCAGCGGGTATATGATACGGGGCCCTGTATGCGGGCCAGACAGTaGGGTAAAGCCAAGGGAGATTATCCAGACCCCCAGGAGCGAACA | + |
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Preference number: 5 (lower is better) Translates to: QQRVYDTGPCMRARQ*GKAKGDYPDPQERT Trigger: TGTTCGCTCCTGGGGGTCTGGATAATCTCCCTTGGCTTTACCGCACTGTCTGGCCCGCATACAGGGCCCCGTATCATATACCCGCTGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000561611.2 ENST00000656218.1 |
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| CDS GCA 90 bp | GTCAGAGTCGATTTCCTGCTTCACGGCCCGGGGCATGCTTTCTGCTaGCGACTCTCTGGCCACCAAGTACTGTCGGAGCAATTGGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: VRVDFLLHGPGHAFC*RLSGHQVLSEQLEL Trigger: CAGCTCCAATTGCTCCGACAGTACTTGGTGGCCAGAGAGTCGGCAGCAGAAAGCATGCCCCGGGCCGTGAAGCAGGAAATCGACTCTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000624829.4 ENST00000653104.1 ENST00000661899.1 ENST00000669279.1 |
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| CDS TCA 90 bp | CGGATGTTTTCACACCCAGCAAGACAAAGGCCGTCGTCTCCGCCATaGCACTGTTCCGTTCCAAGCAGAGGCCGGGATTCTGGACTCCTC | + |
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Preference number: 5 (lower is better) Translates to: RMFSHPARQRPSSPP*HCSVPSRGRDSGLL Trigger: GAGGAGTCCAGAATCCCGGCCTCTGCTTGGAACGGAACAGTGTCATGGCGGAGACGACGGCCTTTGTCTTGCTGGGTGTGAAAACATCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000561611.2 ENST00000656218.1 ENST00000664155.1 |
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| CDS GCA 90 bp | CAAGGATTGAGTCAGAGTCGATTTCCTGCTTCACGGCCCGGGGCATaGTTTCTGCTGCCGACTCTCTGGCCACCAAGTACTGTCGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: QGLSQSRFPASRPGA*FLLPTLWPPSTVGA Trigger: TGCTCCGACAGTACTTGGTGGCCAGAGAGTCGGCAGCAGAAAGCATGCCCCGGGCCGTGAAGCAGGAAATCGACTCTGACTCAATCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000624829.4 ENST00000653104.1 ENST00000661899.1 ENST00000669279.1 |
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| CDS GCA 90 bp | GTTAAGGCAGCTCAGACCTCAAGGATTGAGTCAGAGTCGATTTCCTaGTTCACGGCCCGGGGCATGCTTTCTGCTGCCGACTCTCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: VKAAQTSRIESESIS*FTARGMLSAADSLA Trigger: GGCCAGAGAGTCGGCAGCAGAAAGCATGCCCCGGGCCGTGAAGCAGGAAATCGACTCTGACTCAATCCTTGAGGTCTGAGCTGCCTTAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669279.1 |
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| CDS GCA 90 bp | CACGTGGATGCTGCAGCACTTTGGGAGGATTTGGGAGGTTTCATCTaGCAGCAGGACAGGAGAGTGGCCACTGTCACCATGCAGGGATCT | + |
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Preference number: 5 (lower is better) Translates to: HVDAAALWEDLGGFI*QQDRRVATVTMQGS Trigger: AGATCCCTGCATGGTGACAGTGGCCACTCTCCTGTCCTGCTGGCAGATGAAACCTCCCAAATCCTCCCAAAGTGCTGCAGCATCCACGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS TCA 90 bp | TATCCCACACCTGGCTTGGAGGGTCCTACGCCCACAGAATCTCGCTaGTTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGTCGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: YPTPGLEGPTPTESR*LLAQQSEIKLQVGS Trigger: GCTGCCGACTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCTGTGGGCGTAGGACCCTCCAAGCCAGGTGTGGGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570152.2 |
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| CDS GCA 90 bp | GTTTCGTGTGATAGCAGCAGCGGGTATATGATACGGGGCCCTGTATaGGGGCCAGACAGTGCGGTAAAGCCAAGGGAGATTATCCAGACC | + |
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Preference number: 5 (lower is better) Translates to: VSCDSSSGYMIRGPV*GPDSAVKPREIIQT Trigger: GGTCTGGATAATCTCCCTTGGCTTTACCGCACTGTCTGGCCCGCATACAGGGCCCCGTATCATATACCCGCTGCTGCTATCACACGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000561611.2 ENST00000656218.1 |
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| CDS GCA 90 bp | CCAGATGTAATACAGACCTCAAGGATTGAGTCAGAGTCGATTTCCTaGTTCACGGCCCGGGGCATGCTTTCTGCTGCCGACTCTCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: PDVIQTSRIESESIS*FTARGMLSAADSLA Trigger: GGCCAGAGAGTCGGCAGCAGAAAGCATGCCCCGGGCCGTGAAGCAGGAAATCGACTCTGACTCAATCCTTGAGGTCTGTATTACATCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624829.4 |
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| CDS GCA 90 bp | GGTTGTCCTTTCAGTGGGCAAAGCATTGATCAGTGGTCTCAGTCTTaGCAGCTGGCTTCAAGGGCTCTGCCCCCAACAGTTCCTCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: GCPFSGQSIDQWSQS*QLASRALPPTVPPQ Trigger: CTGAGGAGGAACTGTTGGGGGCAGAGCCCTTGAAGCCAGCTGGCAAGACTGAGACCACTGATCAATGCTTTGCCCACTGAAAGGACAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000624829.4 ENST00000653104.1 |
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| CDS TCA 90 bp | GGGAGTGAAGGAGGAGGAGGGATGCCACACAGACATGCACAAACTTaGAGGCAGAGCGATTTGGAAGGGGCTACTGAGGAAACACTGGTG | + |
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Preference number: 5 (lower is better) Translates to: GSEGGGGMPHRHAQT*RQSDLEGATEETLV Trigger: CACCAGTGTTTCCTCAGTAGCCCCTTCCAAATCGCTCTGCCTTCAAGTTTGTGCATGTCTGTGTGGCATCCCTCCTCCTCCTTCACTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000561611.2 ENST00000656218.1 ENST00000657725.1 ENST00000664155.1 ENST00000666555.1 |
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| CDS GCA 90 bp | GTACTGTCGGAGCAATTGGAGCTGGCTGGGTTACTGTTCCAGGTTTaGCTGCGTCTCCCTGTGCTTGGTCTGCAGTTGATAGATCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: VLSEQLELAGLLFQV*LRLPVLGLQLIDPL Trigger: CAGAGGATCTATCAACTGCAGACCAAGCACAGGGAGACGCAGGCAAACCTGGAACAGTAACCCAGCCAGCTCCAATTGCTCCGACAGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624829.4 ENST00000653104.1 ENST00000661899.1 |
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| CDS GCA 90 bp | GCCTTGATCGACTTGGACCCTCCGGACACATCTTGTCTGGCACGGTaGTGGTTGTGTCCTGCAGTTCTCTCAATGTGCAGTAGGTGTCTA | + |
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Preference number: 5 (lower is better) Translates to: ALIDLDPPDTSCLAR*WLCPAVLSMCSRCL Trigger: TAGACACCTACTGCACATTGAGAGAACTGCAGGACACAACCAGCACCGTGCCAGACAAGATGTGTCCGGAGGGTCCAAGTCGATCAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS GCA 90 bp | GCCACAGCCGGTGCCACTTGCCACTCGGAAAACCTCAGGGAAAGATaGCAATTCTACAGCTGCGAAGAAGGCAGAGAAAGGAGGATAAAG | + |
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Preference number: 5 (lower is better) Translates to: ATAGATCHSENLRER*QFYSCEEGRERRIK Trigger: CTTTATCCTCCTTTCTCTGCCTTCTTCGCAGCTGTAGAATTGGCATCTTTCCCTGAGGTTTTCCGAGTGGCAAGTGGCACCGGCTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000561611.2 ENST00000656218.1 ENST00000657725.1 ENST00000664155.1 ENST00000666555.1 |
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| CDS GCA 90 bp | AGCAGACATCGGAAGAGAAATGCCATAGGAAGCGGCATGAATACATaGCACAGCCGGTGCCACTTGCCACTCGGAAAACCTCAGGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: SRHRKRNAIGSGMNT*HSRCHLPLGKPQGK Trigger: CTTTCCCTGAGGTTTTCCGAGTGGCAAGTGGCACCGGCTGTGGCATGTATTCATGCCGCTTCCTATGGCATTTCTCTTCCGATGTCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000561611.2 ENST00000656218.1 ENST00000657725.1 ENST00000664155.1 ENST00000666555.1 |
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| CDS TCA 90 bp | AGCGACGAAGGCGTTCATATTGAGCCCTGGGTGGGTATAACAGGGTaGGATGTGTTGTATCGTCAGCATGACTGCAAGCCTGGTGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: SDEGVHIEPWVGITG*DVLYRQHDCKPGEL Trigger: AAGCTCACCAGGCTTGCAGTCATGCTGACGATACAACACATCTCACCCTGTTATACCCACCCAGGGCTCAATATGAACGCCTTCGTCGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS TCA 90 bp | AGGGAACTGGAAAAGAAGGGAGGAGAGCGACGAAGGCGTTCATATTaGGCCCTGGGTGGGTATAACAGGGTGAGATGTGTTGTATCGTCA | + |
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Preference number: 5 (lower is better) Translates to: RELEKKGGERRRRSY*ALGGYNRVRCVVSS Trigger: TGACGATACAACACATCTCACCCTGTTATACCCACCCAGGGCTCAATATGAACGCCTTCGTCGCTCTCCTCCCTTCTTTTCCAGTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS GCA 90 bp | AATGAGGCACCAAGTGAATGCAAATACCCTTCTGCACGTGGATGCTaGAGCACTTTGGGAGGATTTGGGAGGTTTCATCTGCCAGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: NEAPSECKYPSARGC*STLGGFGRFHLPAG Trigger: TCCTGCTGGCAGATGAAACCTCCCAAATCCTCCCAAAGTGCTGCAGCATCCACGTGCAGAAGGGTATTTGCATTCACTTGGTGCCTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS GCA 90 bp | AAGAGAAATGCCATAGGAAGCGGCATGAATACATGCCACAGCCGGTaGCACTTGCCACTCGGAAAACCTCAGGGAAAGATGCCAATTCTA | + |
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Preference number: 5 (lower is better) Translates to: KRNAIGSGMNTCHSR*HLPLGKPQGKMPIL Trigger: TAGAATTGGCATCTTTCCCTGAGGTTTTCCGAGTGGCAAGTGGCACCGGCTGTGGCATGTATTCATGCCGCTTCCTATGGCATTTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000561611.2 ENST00000656218.1 ENST00000657725.1 ENST00000664155.1 ENST00000666555.1 |
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| CDS GCA 90 bp | TGTGCTGTCAATGGTGTCCTTCCTTACAATGAGGCACCAAGTGAATaGAAATACCCTTCTGCACGTGGATGCTGCAGCACTTTGGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: CAVNGVLPYNEAPSE*KYPSARGCCSTLGG Trigger: TCCTCCCAAAGTGCTGCAGCATCCACGTGCAGAAGGGTATTTGCATTCACTTGGTGCCTCATTGTAAGGAAGGACACCATTGACAGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS TCA 90 bp | AGGGATGCTCTGTTCACTTCACGTGGGCTTAGATTTATGAGGTGCTaGGAAACAAGAGTGTGGGGCCCTTCAAGTTGTACTCCCAGATGT | + |
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Preference number: 5 (lower is better) Translates to: RDALFTSRGLRFMRC*ETRVWGPSSCTPRC Trigger: ACATCTGGGAGTACAACTTGAAGGGCCCCACACTCTTGTTTCTCAGCACCTCATAAATCTAAGCCCACGTGAAGTGAACAGAGCATCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000624829.4 ENST00000653104.1 |
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| CDS TCA 90 bp | CTGGCTCATGGCTCCTTCCTGTCTTCAAAGCCAGCAATAATCAGTTaGGTCCTTCTCAGGCTGATGCTTCTCTGGTTCTTCCATAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: LAHGSFLSSKPAIIS*VLLRLMLLWFFHSF Trigger: GAAACTATGGAAGAACCAGAGAAGCATCAGCCTGAGAAGGACTCAACTGATTATTGCTGGCTTTGAAGACAGGAAGGAGCCATGAGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000570152.2 ENST00000657725.1 |
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| CDS TCA 90 bp | CTTGAAGAAGGGATGCTCTGTTCACTTCACGTGGGCTTAGATTTATaGGGTGCTGAGAAACAAGAGTGTGGGGCCCTTCAAGTTGTACTC | + |
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Preference number: 5 (lower is better) Translates to: LEEGMLCSLHVGLDL*GAEKQECGALQVVL Trigger: GAGTACAACTTGAAGGGCCCCACACTCTTGTTTCTCAGCACCTCATAAATCTAAGCCCACGTGAAGTGAACAGAGCATCCCTTCTTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000624829.4 ENST00000653104.1 |
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| CDS GCA 90 bp | CTCTCCATCCACGTGAAGAACATACATTCCTTCAAGGTAATCTCCTaGTACCGGTTCCTAACAGGTCACAGACTGGTATTGATCCATGGC | + |
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Preference number: 5 (lower is better) Translates to: LSIHVKNIHSFKVIS*YRFLTGHRLVLIHG Trigger: GCCATGGATCAATACCAGTCTGTGACCTGTTAGGAACCGGTAGCAGGAGATTACCTTGAAGGAATGTATGTTCTTCACGTGGATGGAGAG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570152.2 |
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| CDS GCA 90 bp | CACCATGCAGGGATCTCTCTCTTAAAGTCTGGGCTTGAAAGTAGGTaGCTCCATTTCAGTGTCTTCCAGCTGAGCTTTTGTTTTCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: HHAGISLLKSGLESR*LHFSVFQLSFCFLC Trigger: GCAGAGAAAACAAAAGCTCAGCTGGAAGACACTGAAATGGAGGCACCTACTTTCAAGCCCAGACTTTAAGAGAGAGATCCCTGCATGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS TCA 90 bp | GAAGTTCCCAAACTGAAAAGATTGTATCCTGGACATCCAAGCAGATaGAGGATTCAGGGCGAACAGATTTGTATCCTGGCACCAGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: EVPKLKRLYPGHPSR*RIQGEQICILAPEQ Trigger: CTGCTCTGGTGCCAGGATACAAATCTGTTCGCCCTGAATCCTTCATCTGCTTGGATGTCCAGGATACAATCTTTTCAGTTTGGGAACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000624829.4 ENST00000653104.1 |
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| CDS TCA 90 bp | CACGCAGGAAGAAATCTAGGTGTATTCATCTGTTTTCTACTGCTGTaGGATCAAGGTGTCACAGTGCTGCATTCCTTTCTGAAGGGGCTA | + |
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Preference number: 5 (lower is better) Translates to: HAGRNLGVFICFLLL*DQGVTVLHSFLKGL Trigger: TAGCCCCTTCAGAAAGGAATGCAGCACTGTGACACCTTGATCTCACAGCAGTAGAAAACAGATGAATACACCTAGATTTCTTCCTGCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000570152.2 |
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| CDS GCA 90 bp | CTCATATGGATAGGTGCTCTCTTAAAGTCTGGGCTTGAAAGTAGGTaGCTCCATTTCAGTGTCTTCCAGCTGAGCTTTTGTTTTCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: LIWIGALLKSGLESR*LHFSVFQLSFCFLC Trigger: GCAGAGAAAACAAAAGCTCAGCTGGAAGACACTGAAATGGAGGCACCTACTTTCAAGCCCAGACTTTAAGAGAGCACCTATCCATATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669279.1 |
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| CDS TCA 90 bp | TTGTGGAAGACAATTTTTCCACACATGGGGGCGGTGGTTTCAGGATaGAACTGTTCCACCTCAGATCATCAGGCATTAGATTCTCATAAG | + |
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Preference number: 5 (lower is better) Translates to: LWKTIFPHMGAVVSG*NCSTSDHQALDSHK Trigger: CTTATGAGAATCTAATGCCTGATGATCTGAGGTGGAACAGTTTCATCCTGAAACCACCGCCCCCATGTGTGGAAAAATTGTCTTCCACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000570035.5 ENST00000659470.1 ENST00000662171.1 |
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| CDS TCA 90 bp | AGTCTGGGCTTGAAAGTAGGTGCCTCCATTTCAGTGTCTTCCAGCTaGGCTTTTGTTTTCTCTGCCTGTAAGTTGAGTAGAGAAGAAGTT | + |
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Preference number: 5 (lower is better) Translates to: SLGLKVGASISVSSS*AFVFSACKLSREEV Trigger: AACTTCTTCTCTACTCAACTTACAGGCAGAGAAAACAAAAGCTCAGCTGGAAGACACTGAAATGGAGGCACCTACTTTCAAGCCCAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS TCA 90 bp | ATTCACGCAGGAAGAAATCTAGGTGTATTCATCTGTTTTCTACTGTaGGATCAAGGTGTCACAGTGCTGCATTCCTTTCTGAAGGGGCTA | + |
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Preference number: 5 (lower is better) Translates to: IHAGRNLGVFICFLL*DQGVTVLHSFLKGL Trigger: TAGCCCCTTCAGAAAGGAATGCAGCACTGTGACACCTTGATCTCACAGTAGAAAACAGATGAATACACCTAGATTTCTTCCTGCGTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657725.1 |
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| CDS GCA 90 bp | GAATTTCTGAAGCTGACAATAAAGGTCCATCATGACATCAGACTCTaGAGCAGGTTGTGCTGTGATAAAAGCCCAAGAAAGATGCCTGAA | + |
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Preference number: 5 (lower is better) Translates to: EFLKLTIKVHHDIRL*SRLCCDKSPRKMPE Trigger: TTCAGGCATCTTTCTTGGGCTTTTATCACAGCACAACCTGCTGCAGAGTCTGATGTCATGATGGACCTTTATTGTCAGCTTCAGAAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653104.1 |
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| CDS TCA 90 bp | ACTGACTGCCATATATTTGAACAGCCAAAGCCTTGCAAGAATATTTaGTTGGCCTTTGTTTACCGAGGGTTTCCAGTATCTCCCTCTCTA | + |
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Preference number: 5 (lower is better) Translates to: TDCHIFEQPKPCKNI*LAFVYRGFPVSPSL Trigger: TAGAGAGGGAGATACTGGAAACCCTCGGTAAACAAAGGCCAATCAAATATTCTTGCAAGGCTTTGGCTGTTCAAATATATGGCAGTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS GCA 90 bp | CTGACAATAAAGGTCCATCATGACATCAGACTCTGCAGCAGGTTGTaGTGTGATAAAAGCCCAAGAAAGATGCCTGAAATACTTATTTGC | + |
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Preference number: 5 (lower is better) Translates to: LTIKVHHDIRLCSRL*CDKSPRKMPEILIC Trigger: GCAAATAAGTATTTCAGGCATCTTTCTTGGGCTTTTATCACAGCACAACCTGCTGCAGAGTCTGATGTCATGATGGACCTTTATTGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653104.1 |
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| CDS TCA 90 bp | CACTTATATCCACATTTCACTGGCAAAAGAAAGTCTTACCAAGCTTaGTGTCAAAGAGACAGTCATCTCATATGGATAGGTGCTCTCTTA | + |
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Preference number: 5 (lower is better) Translates to: HLYPHFTGKRKSYQA*CQRDSHLIWIGALL Trigger: TAAGAGAGCACCTATCCATATGAGATGACTGTCTCTTTGACATCAAGCTTGGTAAGACTTTCTTTTGCCAGTGAAATGTGGATATAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669279.1 |
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| CDS TCA 90 bp | TATTCCAGCCTGTATGTTATCTTGCTTTTGAACAGTAGATCTCAATaGCCAAGCACAGTGCCAAGCACAAGGACACTAAGTAATATTTAT | + |
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Preference number: 5 (lower is better) Translates to: YSSLYVILLLNSRSQ*PSTVPSTRTLSNIY Trigger: ATAAATATTACTTAGTGTCCTTGTGCTTGGCACTGTGCTTGGTCATTGAGATCTACTGTTCAAAAGCAAGATAACATACAGGCTGGAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000624829.4 ENST00000653104.1 ENST00000661899.1 |
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| CDS GCA 90 bp | GCTTCAGTCTTCACTTTGGTTGCAGAAAGCTTCTCTGTTGATGATTaGAGTTTAAGCTCTTCTTGTTTCTTTGCCATTCTTGTAAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: ASVFTLVAESFSVDD*SLSSSCFFAILVSF Trigger: AAAACTTACAAGAATGGCAAAGAAACAAGAAGAGCTTAAACTGCAATCATCAACAGAGAAGCTTTCTGCAACCAAAGTGAAGACTGAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000563770.5 ENST00000563823.6 ENST00000570152.2 ENST00000624829.4 ENST00000655530.1 ENST00000656218.1 ENST00000657725.1 ENST00000659470.1 ENST00000662171.1 ENST00000668081.1 |
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| CDS GCA 90 bp | CTAAGGCTTCAGTCTTTGGTTGCAGAAAGCTTCTCTGTTGATGATTaGAGTTTAAGCTCTTCTTGTTTCTTTGCCATTCTTGTAAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: LRLQSLVAESFSVDD*SLSSSCFFAILVSF Trigger: AAAACTTACAAGAATGGCAAAGAAACAAGAAGAGCTTAAACTGCAATCATCAACAGAGAAGCTTTCTGCAACCAAAGACTGAAGCCTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664155.1 |
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| CDS GCA 90 bp | CATACCAGTATATACAGCTCTATTTTGTATATGTGTGTGTGTGTTTaGGTGTGTTCCATGGTTTATTCAACCAGTCCCTTATTACTAGAT | + |
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Preference number: 5 (lower is better) Translates to: HTSIYSSILYMCVCV*VCSMVYSTSPLLLD Trigger: ATCTAGTAATAAGGGACTGGTTGAATAAACCATGGAACACACGCAAACACACACACACATATACAAAATAGAGCTGTATATACTGGTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659470.1 ENST00000662171.1 |
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| CDS CCA 72 bp | TCACGGCCCGGGGCATGCTTTCTGCTGCCGACTCTCTaGCCACCAAGTACTGTCGGAGCAATTGGAGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: SRPGACFLLPTL*PPSTVGAIGAG Trigger: GCCAGCTCCAATTGCTCCGACAGTACTTGGTGGCCAGAGAGTCGGCAGCAGAAAGCATGCCCCGGGCCGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000624829.4 ENST00000653104.1 ENST00000661899.1 ENST00000669279.1 |
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| CDS CCA 72 bp | CCTTCCTCGGACCCTGGGACTCGGCTACTTGGGGTTTaGGGGTCTTCCACACCACAGAGGCACAAAGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: PSSDPGTRLLGV*GSSTPQRHKAD Trigger: GTCAGCTTTGTGCCTCTGTGGTGTGGAAGACCCCCAAACCCCAAGTAGCCGAGTCCCAGGGTCCGAGGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000561611.2 ENST00000656218.1 |
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| CDS CCA 72 bp | CTAGGCTGCTCCAACTATGAGCCCTTCCTCGGACCCTaGGACTCGGCTACTTGGGGTTTGGGGGTCTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: LGCSNYEPFLGP*DSATWGLGVFH Trigger: GTGGAAGACCCCCAAACCCCAAGTAGCCGAGTCCCAGGGTCCGAGGAAGGGCTCATAGTTGGAGCAGCCTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000561611.2 ENST00000656218.1 |
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| CDS TCA 72 bp | ACGCCACAGTTTCGTGTGATAGCAGCAGCGGGTATATaGTACGGGGCCCTGTATGCGGGCCAGACAGTGCGG | + |
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Preference number: 6 (lower is better) Translates to: TPQFRVIAAAGI*YGALYAGQTVR Trigger: CCGCACTGTCTGGCCCGCATACAGGGCCCCGTATCATATACCCGCTGCTGCTATCACACGAAACTGTGGCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000561611.2 ENST00000656218.1 |
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| CDS GCA 72 bp | AACCGAAGGCGCAAGTGCCAGGATTACAGCCTAGGCTaGTCCAACTATGAGCCCTTCCTCGGACCCTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: NRRRKCQDYSLG*SNYEPFLGPWD Trigger: GTCCCAGGGTCCGAGGAAGGGCTCATAGTTGGAGCAGCCTAGGCTGTAATCCTGGCACTTGCGCCTTCGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000561611.2 ENST00000656218.1 |
||
| CDS GCA 72 bp | GATTTCCTGCTTCACGGCCCGGGGCATGCTTTCTGCTaGCGACTCTCTGGCCACCAAGTACTGTCGGAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: DFLLHGPGHAFC*RLSGHQVLSEQ Trigger: TTGCTCCGACAGTACTTGGTGGCCAGAGAGTCGGCAGCAGAAAGCATGCCCCGGGCCGTGAAGCAGGAAATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000624829.4 ENST00000653104.1 ENST00000661899.1 ENST00000669279.1 |
||
| CDS CCA 72 bp | AAATCGTTTGCCCGTTTGCCCGTGCCAGGGGTGATCTaGGCATCTGTTGCAGCAGAAGGCGCTTGTGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: KSFARLPVPGVI*ASVAAEGACVG Trigger: CCCCACACAAGCGCCTTCTGCTGCAACAGATGCCCAGATCACCCCTGGCACGGGCAAACGGGCAAACGATTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000561611.2 ENST00000656218.1 ENST00000664155.1 |
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| CDS CCA 72 bp | TATGAGCCCTTCCTCGGACCCTGGGACTCGGCTACTTaGGGTTTGGGGGTCTTCCACACCACAGAGGCACAA | + |
|
Preference number: 6 (lower is better) Translates to: YEPFLGPWDSAT*GLGVFHTTEAQ Trigger: TTGTGCCTCTGTGGTGTGGAAGACCCCCAAACCCCAAGTAGCCGAGTCCCAGGGTCCGAGGAAGGGCTCATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000561611.2 ENST00000656218.1 |
||
| CDS CAA 90 bp | GCTTTCTGCTGCCGACTCTCTGGCCACCAAGTACTGTCGGAGCAATaGGAGCTGGCTGGGTTACTGTTCCAGGTTTGCCTGCGTCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: AFCCRLSGHQVLSEQ*ELAGLLFQVCLRLP Trigger: AGGGAGACGCAGGCAAACCTGGAACAGTAACCCAGCCAGCTCCAATTGCTCCGACAGTACTTGGTGGCCAGAGAGTCGGCAGCAGAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000624829.4 ENST00000653104.1 ENST00000661899.1 ENST00000669279.1 |
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| CDS TCA 72 bp | TCACACCCAGCAAGACAAAGGCCGTCGTCTCCGCCATaGCACTGTTCCGTTCCAAGCAGAGGCCGGGATTCT | + |
|
Preference number: 6 (lower is better) Translates to: SHPARQRPSSPP*HCSVPSRGRDS Trigger: AGAATCCCGGCCTCTGCTTGGAACGGAACAGTGTCATGGCGGAGACGACGGCCTTTGTCTTGCTGGGTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000561611.2 ENST00000656218.1 ENST00000664155.1 |
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| CDS GCA 72 bp | AAGCTGCAAGGGCGGATGGCAGAAGAGTTGGCACCGTaGCATCCATTCAGGGGCAACGCCACAGTTTCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: KLQGRMAEELAP*HPFRGNATVSC Trigger: ACACGAAACTGTGGCGTTGCCCCTGAATGGATGGCACGGTGCCAACTCTTCTGCCATCCGCCCTTGCAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000561611.2 ENST00000656218.1 |
||
| CDS GCA 72 bp | AGTCAGAGTCGATTTCCTGCTTCACGGCCCGGGGCATaGTTTCTGCTGCCGACTCTCTGGCCACCAAGTACT | + |
|
Preference number: 6 (lower is better) Translates to: SQSRFPASRPGA*FLLPTLWPPST Trigger: AGTACTTGGTGGCCAGAGAGTCGGCAGCAGAAAGCATGCCCCGGGCCGTGAAGCAGGAAATCGACTCTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000624829.4 ENST00000653104.1 ENST00000661899.1 ENST00000669279.1 |
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| CDS GCA 72 bp | GCTCAGACCTCAAGGATTGAGTCAGAGTCGATTTCCTaGTTCACGGCCCGGGGCATGCTTTCTGCTGCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: AQTSRIESESIS*FTARGMLSAAD Trigger: GTCGGCAGCAGAAAGCATGCCCCGGGCCGTGAAGCAGGAAATCGACTCTGACTCAATCCTTGAGGTCTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669279.1 |
||
| CDS CCA 72 bp | GCCGACTCTCTGGCCACCAAGTACTGTCGGAGCAATTaGAGCTGGCTGGGTTACTGTTCCAGGTTTGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ADSLATKYCRSN*SWLGYCSRFAC Trigger: GCAGGCAAACCTGGAACAGTAACCCAGCCAGCTCCAATTGCTCCGACAGTACTTGGTGGCCAGAGAGTCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000624829.4 ENST00000653104.1 ENST00000661899.1 ENST00000669279.1 |
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| CDS CAA 72 bp | AATAAGCAGGCAACGCTCCCTCAGCAGTTGCTAGCTTaGCTGCGGGCTTTCCCTGTTCCCCTGCACCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: NKQATLPQQLLA*LRAFPVPLHQC Trigger: GCACTGGTGCAGGGGAACAGGGAAAGCCCGCAGCAAAGCTAGCAACTGCTGAGGGAGCGTTGCCTGCTTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000561611.2 ENST00000656218.1 |
||
| CDS CAA 90 bp | CTCTACTCCAATAAGCAGGCAACGCTCCCTCAGCAGTTGCTAGCTTaGCTGCGGGCTTTCCCTGTTCCCCTGCACCAGTGCGAAAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LYSNKQATLPQQLLA*LRAFPVPLHQCEKQ Trigger: CTGCTTTTCGCACTGGTGCAGGGGAACAGGGAAAGCCCGCAGCAAAGCTAGCAACTGCTGAGGGAGCGTTGCCTGCTTATTGGAGTAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000561611.2 ENST00000656218.1 |
||
| CDS CAA 90 bp | TTCTATCGGCTCTACTCCAATAAGCAGGCAACGCTCCCTCAGCAGTaGCTAGCTTTGCTGCGGGCTTTCCCTGTTCCCCTGCACCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: FYRLYSNKQATLPQQ*LALLRAFPVPLHQC Trigger: GCACTGGTGCAGGGGAACAGGGAAAGCCCGCAGCAAAGCTAGCAACTGCTGAGGGAGCGTTGCCTGCTTATTGGAGTAGAGCCGATAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000561611.2 ENST00000656218.1 |
||
| CDS GCA 72 bp | CAGGAGCGAACAGCAAGCAGCAACCGAAGGCGCAAGTaGCAGGATTACAGCCTAGGCTGCTCCAACTATGAG | + |
|
Preference number: 6 (lower is better) Translates to: QERTASSNRRRK*QDYSLGCSNYE Trigger: CTCATAGTTGGAGCAGCCTAGGCTGTAATCCTGGCACTTGCGCCTTCGGTTGCTGCTTGCTGTTCGCTCCTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000561611.2 ENST00000656218.1 |
||
| CDS GCA 72 bp | GTATATGATACGGGGCCCTGTATGCGGGCCAGACAGTaGGGTAAAGCCAAGGGAGATTATCCAGACCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VYDTGPCMRARQ*GKAKGDYPDPQ Trigger: CTGGGGGTCTGGATAATCTCCCTTGGCTTTACCGCACTGTCTGGCCCGCATACAGGGCCCCGTATCATATAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000561611.2 ENST00000656218.1 |
||
| CDS GCA 72 bp | GATAGCAGCAGCGGGTATATGATACGGGGCCCTGTATaGGGGCCAGACAGTGCGGTAAAGCCAAGGGAGATT | + |
|
Preference number: 6 (lower is better) Translates to: DSSSGYMIRGPV*GPDSAVKPREI Trigger: AATCTCCCTTGGCTTTACCGCACTGTCTGGCCCGCATACAGGGCCCCGTATCATATACCCGCTGCTGCTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000561611.2 ENST00000656218.1 |
||
| CDS GCA 72 bp | TTCTCTGCCTCAAGGATTGAGTCAGAGTCGATTTCCTaGTTCACGGCCCGGGGCATGCTTTCTGCTGCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: FSASRIESESIS*FTARGMLSAAD Trigger: GTCGGCAGCAGAAAGCATGCCCCGGGCCGTGAAGCAGGAAATCGACTCTGACTCAATCCTTGAGGCAGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661899.1 |
||
| CDS CCA 72 bp | AACGGTGCACCACGAGACTATATCCCACACCTGGCTTaGAGGGTCCTACGCCCACAGAATCTCGCTGATTGC | + |
|
Preference number: 6 (lower is better) Translates to: NGAPRDYIPHLA*RVLRPQNLADC Trigger: GCAATCAGCGAGATTCTGTGGGCGTAGGACCCTCCAAGCCAGGTGTGGGATATAGTCTCGTGGTGCACCGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000563770.5 ENST00000563823.6 ENST00000570152.2 |
||
| CDS CCA 72 bp | TCTCTGGCCACCAAGTACTGTCGGAGCAATTGGAGCTaGCTGGGTTACTGTTCCAGGTTTGCCTGCGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLATKYCRSNWS*LGYCSRFACVS Trigger: GGAGACGCAGGCAAACCTGGAACAGTAACCCAGCCAGCTCCAATTGCTCCGACAGTACTTGGTGGCCAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000624829.4 ENST00000653104.1 ENST00000661899.1 ENST00000669279.1 |
||
| CDS CCA 72 bp | GGCAAAGCATTGATCAGTGGTCTCAGTCTTGCCAGCTaGCTTCAAGGGCTCTGCCCCCAACAGTTCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GKALISGLSLAS*LQGLCPQQFLL Trigger: GAGGAGGAACTGTTGGGGGCAGAGCCCTTGAAGCCAGCTGGCAAGACTGAGACCACTGATCAATGCTTTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000624829.4 ENST00000653104.1 |
||
| CDS CAA 72 bp | CTCTACTCCAATAAGCAGGCAACGCTCCCTCAGCAGTaGCTAGCTTTGCTGCGGGCTTTCCCTGTTCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LYSNKQATLPQQ*LALLRAFPVPL Trigger: CAGGGGAACAGGGAAAGCCCGCAGCAAAGCTAGCAACTGCTGAGGGAGCGTTGCCTGCTTATTGGAGTAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000561611.2 ENST00000656218.1 |
||
| CDS CAA 72 bp | TGCCGACTCTCTGGCCACCAAGTACTGTCGGAGCAATaGGAGCTGGCTGGGTTACTGTTCCAGGTTTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: CRLSGHQVLSEQ*ELAGLLFQVCL Trigger: CAGGCAAACCTGGAACAGTAACCCAGCCAGCTCCAATTGCTCCGACAGTACTTGGTGGCCAGAGAGTCGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000624829.4 ENST00000653104.1 ENST00000661899.1 ENST00000669279.1 |
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| CDS CAA 90 bp | TTACTGTTCCAGGTTTGCCTGCGTCTCCCTGTGCTTGGTCTGCAGTaGATAGATCCTCTGCTCCTGAAGCATCCAGCTCAGCTGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLFQVCLRLPVLGLQ*IDPLLLKHPAQLPG Trigger: GCCTGGCAGCTGAGCTGGATGCTTCAGGAGCAGAGGATCTATCAACTGCAGACCAAGCACAGGGAGACGCAGGCAAACCTGGAACAGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624829.4 ENST00000653104.1 ENST00000661899.1 |
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| CDS CAA 90 bp | GCAAATACCCTTCTGCACGTGGATGCTGCAGCACTTTGGGAGGATTaGGGAGGTTTCATCTGCCAGCAGGACAGGAGAGTGGCCACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ANTLLHVDAAALWED*GGFICQQDRRVATV Trigger: GACAGTGGCCACTCTCCTGTCCTGCTGGCAGATGAAACCTCCCAAATCCTCCCAAAGTGCTGCAGCATCCACGTGCAGAAGGGTATTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS GCA 72 bp | GCCATAGGAAGCGGCATGAATACATGCCACAGCCGGTaGCACTTGCCACTCGGAAAACCTCAGGGAAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: AIGSGMNTCHSR*HLPLGKPQGKM Trigger: CATCTTTCCCTGAGGTTTTCCGAGTGGCAAGTGGCACCGGCTGTGGCATGTATTCATGCCGCTTCCTATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000561611.2 ENST00000656218.1 ENST00000657725.1 ENST00000664155.1 ENST00000666555.1 |
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| CDS GCA 72 bp | ATACAGACCTCAAGGATTGAGTCAGAGTCGATTTCCTaGTTCACGGCCCGGGGCATGCTTTCTGCTGCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: IQTSRIESESIS*FTARGMLSAAD Trigger: GTCGGCAGCAGAAAGCATGCCCCGGGCCGTGAAGCAGGAAATCGACTCTGACTCAATCCTTGAGGTCTGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624829.4 |
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| CDS GCA 72 bp | GACTTGGACCCTCCGGACACATCTTGTCTGGCACGGTaGTGGTTGTGTCCTGCAGTTCTCTCAATGTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: DLDPPDTSCLAR*WLCPAVLSMCS Trigger: ACTGCACATTGAGAGAACTGCAGGACACAACCAGCACCGTGCCAGACAAGATGTGTCCGGAGGGTCCAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS CCA 72 bp | TTCTGCACGTGGATGCTGCAGCACTTTGGGAGGATTTaGGAGGTTTCATCTGCCAGCAGGACAGGAGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: FCTWMLQHFGRI*EVSSASRTGEW Trigger: CCACTCTCCTGTCCTGCTGGCAGATGAAACCTCCCAAATCCTCCCAAAGTGCTGCAGCATCCACGTGCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS CCA 72 bp | TTGGACCCTCCGGACACATCTTGTCTGGCACGGTGCTaGTTGTGTCCTGCAGTTCTCTCAATGTGCAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: LDPPDTSCLARC*LCPAVLSMCSR Trigger: CCTACTGCACATTGAGAGAACTGCAGGACACAACCAGCACCGTGCCAGACAAGATGTGTCCGGAGGGTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS CAA 72 bp | GGAGCAATTGGAGCTGGCTGGGTTACTGTTCCAGGTTaGCCTGCGTCTCCCTGTGCTTGGTCTGCAGTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: GAIGAGWVTVPG*PASPCAWSAVD Trigger: ATCAACTGCAGACCAAGCACAGGGAGACGCAGGCAAACCTGGAACAGTAACCCAGCCAGCTCCAATTGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624829.4 ENST00000653104.1 ENST00000661899.1 |
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| CDS CAA 72 bp | GACCCTCCGGACACATCTTGTCTGGCACGGTGCTGGTaGTGTCCTGCAGTTCTCTCAATGTGCAGTAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: DPPDTSCLARCW*CPAVLSMCSRC Trigger: ACACCTACTGCACATTGAGAGAACTGCAGGACACAACCAGCACCGTGCCAGACAAGATGTGTCCGGAGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS CAA 72 bp | GTATGCCTTGATCGACTTGGACCCTCCGGACACATCTaGTCTGGCACGGTGCTGGTTGTGTCCTGCAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VCLDRLGPSGHI*SGTVLVVSCSS Trigger: AGAACTGCAGGACACAACCAGCACCGTGCCAGACAAGATGTGTCCGGAGGGTCCAAGTCGATCAAGGCATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS TCA 72 bp | GGAGGAGGAGGGATGCCACACAGACATGCACAAACTTaGAGGCAGAGCGATTTGGAAGGGGCTACTGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GGGGMPHRHAQT*RQSDLEGATEE Trigger: TTCCTCAGTAGCCCCTTCCAAATCGCTCTGCCTTCAAGTTTGTGCATGTCTGTGTGGCATCCCTCCTCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000561611.2 ENST00000656218.1 ENST00000657725.1 ENST00000664155.1 ENST00000666555.1 |
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| CDS GCA 72 bp | CGGAAGAGAAATGCCATAGGAAGCGGCATGAATACATaGCACAGCCGGTGCCACTTGCCACTCGGAAAACCT | + |
|
Preference number: 6 (lower is better) Translates to: RKRNAIGSGMNT*HSRCHLPLGKP Trigger: AGGTTTTCCGAGTGGCAAGTGGCACCGGCTGTGGCATGTATTCATGCCGCTTCCTATGGCATTTCTCTTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000561611.2 ENST00000656218.1 ENST00000657725.1 ENST00000664155.1 ENST00000666555.1 |
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| CDS GCA 72 bp | GAGCAATTGGAGCTGGCTGGGTTACTGTTCCAGGTTTaGCTGCGTCTCCCTGTGCTTGGTCTGCAGTTGATA | + |
|
Preference number: 6 (lower is better) Translates to: EQLELAGLLFQV*LRLPVLGLQLI Trigger: TATCAACTGCAGACCAAGCACAGGGAGACGCAGGCAAACCTGGAACAGTAACCCAGCCAGCTCCAATTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624829.4 ENST00000653104.1 ENST00000661899.1 |
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| CDS GCA 72 bp | TTCAGTGGGCAAAGCATTGATCAGTGGTCTCAGTCTTaGCAGCTGGCTTCAAGGGCTCTGCCCCCAACAGTT | + |
|
Preference number: 6 (lower is better) Translates to: FSGQSIDQWSQS*QLASRALPPTV Trigger: AACTGTTGGGGGCAGAGCCCTTGAAGCCAGCTGGCAAGACTGAGACCACTGATCAATGCTTTGCCCACTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000624829.4 ENST00000653104.1 |
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| CDS GCA 72 bp | TGTGTGAGAGAGAGAGAGAGAGAGACAGGGAGAGCGTaGAAGAGAGAGAGAGAGAGAGTGGCAAAGGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: CVRERERETGRA*KRERERVAKVQ Trigger: CTGCACCTTTGCCACTCTCTCTCTCTCTCTCTTGCACGCTCTCCCTGTCTCTCTCTCTCTCTCTCTCACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS CCA 72 bp | GCAAATACCCTTCTGCACGTGGATGCTGCAGCACTTTaGGAGGATTTGGGAGGTTTCATCTGCCAGCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ANTLLHVDAAAL*EDLGGFICQQD Trigger: GTCCTGCTGGCAGATGAAACCTCCCAAATCCTCCCAAAGTGCTGCAGCATCCACGTGCAGAAGGGTATTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS CAA 72 bp | GGAAGCGGCATGAATACATGCCACAGCCGGTGCCACTaGCCACTCGGAAAACCTCAGGGAAAGATGCCAATT | + |
|
Preference number: 6 (lower is better) Translates to: GSGMNTCHSRCH*PLGKPQGKMPI Trigger: AATTGGCATCTTTCCCTGAGGTTTTCCGAGTGGCAAGTGGCACCGGCTGTGGCATGTATTCATGCCGCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000561611.2 ENST00000656218.1 ENST00000657725.1 ENST00000664155.1 ENST00000666555.1 |
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| CDS CAA 72 bp | GGCCCTCTCTCTTCTGCAGGAGCTGGCTTTGAAGGCTaGGGATTCTTGCATCTCGCTATTCCAGCCTGTATG | + |
|
Preference number: 6 (lower is better) Translates to: GPLSSAGAGFEG*GFLHLAIPACM Trigger: CATACAGGCTGGAATAGCGAGATGCAAGAATCCCAAGCCTTCAAAGCCAGCTCCTGCAGAAGAGAGAGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624829.4 ENST00000653104.1 ENST00000661899.1 |
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| CDS CAA 90 bp | AGTACTGTCGGAGCAATTGGAGCTGGCTGGGTTACTGTTCCAGGTTaGCCTGCGTCTCCCTGTGCTTGGTCTGCAGTTGATAGATCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: STVGAIGAGWVTVPG*PASPCAWSAVDRSS Trigger: AGAGGATCTATCAACTGCAGACCAAGCACAGGGAGACGCAGGCAAACCTGGAACAGTAACCCAGCCAGCTCCAATTGCTCCGACAGTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624829.4 ENST00000653104.1 ENST00000661899.1 |
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| CDS TCA 72 bp | CTTATCTGTATTTGTAGTCTCAGCTACTTGGGTGGCTaGGGCTGGAAGATTCCTTGCGCCCAGGAGGTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: LICICSLSYLGG*GWKIPCAQEVE Trigger: CTCGACCTCCTGGGCGCAAGGAATCTTCCAGCCTCAGCCACCCAAGTAGCTGAGACTACAAATACAGATAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563823.6 |
||
| CDS GCA 72 bp | GGTGCCACTTGCCACTCGGAAAACCTCAGGGAAAGATaGCAATTCTACAGCTGCGAAGAAGGCAGAGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GATCHSENLRER*QFYSCEEGRER Trigger: CCTTTCTCTGCCTTCTTCGCAGCTGTAGAATTGGCATCTTTCCCTGAGGTTTTCCGAGTGGCAAGTGGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000561611.2 ENST00000656218.1 ENST00000657725.1 ENST00000664155.1 ENST00000666555.1 |
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| CDS CCA 72 bp | CTGCACCAGTGCGAAAAGCAGAGTGTGCCAAGCGGCTaGCGTCTGTACCCTGTGGGAAAAGTTAACTGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: LHQCEKQSVPSG*RLYPVGKVNCN Trigger: ATTACAGTTAACTTTTCCCACAGGGTACAGACGCCAGCCGCTTGGCACACTCTGCTTTTCGCACTGGTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000561611.2 ENST00000656218.1 |
||
| CDS CCA 72 bp | GCCCTCTCTCTTCTGCAGGAGCTGGCTTTGAAGGCTTaGGATTCTTGCATCTCGCTATTCCAGCCTGTATGT | + |
|
Preference number: 6 (lower is better) Translates to: ALSLLQELALKA*DSCISLFQPVC Trigger: ACATACAGGCTGGAATAGCGAGATGCAAGAATCCCAAGCCTTCAAAGCCAGCTCCTGCAGAAGAGAGAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624829.4 ENST00000653104.1 ENST00000661899.1 |
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| CDS CAA 90 bp | GTATCCTGGACATCCAAGCAGATGAAGGATTCAGGGCGAACAGATTaGTATCCTGGCACCAGAGCAGATGATGGGTTTAGGGACCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VSWTSKQMKDSGRTD*YPGTRADDGFRDRS Trigger: GCTGCGGTCCCTAAACCCATCATCTGCTCTGGTGCCAGGATACAAATCTGTTCGCCCTGAATCCTTCATCTGCTTGGATGTCCAGGATAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000624829.4 ENST00000653104.1 |
||
| CDS CAA 90 bp | CCAAGTGAATGCAAATACCCTTCTGCACGTGGATGCTGCAGCACTTaGGGAGGATTTGGGAGGTTTCATCTGCCAGCAGGACAGGAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PSECKYPSARGCCST*GGFGRFHLPAGQES Trigger: ACTCTCCTGTCCTGCTGGCAGATGAAACCTCCCAAATCCTCCCAAAGTGCTGCAGCATCCACGTGCAGAAGGGTATTTGCATTCACTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS CAA 90 bp | GGATTTTTCCCTGCCTCTTCCATCTTCTGGTGGCTCCCGAAATTCTaGGCATTTCTTGGCTTGTGGCAACATCACTGTAGTCTCCGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: GFFPASSIFWWLPKF*AFLGLWQHHCSLRV Trigger: CACGCGGAGACTACAGTGATGTTGCCACAAGCCAAGAAATGCCAAGAATTTCGGGAGCCACCAGAAGATGGAAGAGGCAGGGAAAAATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000624829.4 ENST00000661899.1 |
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| CDS CAA 90 bp | TCTCATTATGTATGCCTTGATCGACTTGGACCCTCCGGACACATCTaGTCTGGCACGGTGCTGGTTGTGTCCTGCAGTTCTCTCAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: SHYVCLDRLGPSGHI*SGTVLVVSCSSLNV Trigger: CACATTGAGAGAACTGCAGGACACAACCAGCACCGTGCCAGACAAGATGTGTCCGGAGGGTCCAAGTCGATCAAGGCATACATAATGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
||
| CDS TCA 72 bp | ACAAACTTGAAGGCAGAGCGATTTGGAAGGGGCTACTaGGGAAACACTGGTGGCATAACGCAGGGGAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: TNLKAERFGRGY*GNTGGITQGRR Trigger: TCTTCTCCCCTGCGTTATGCCACCAGTGTTTCCTCAGTAGCCCCTTCCAAATCGCTCTGCCTTCAAGTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000561611.2 ENST00000656218.1 ENST00000657725.1 ENST00000664155.1 ENST00000666555.1 |
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| CDS TCA 72 bp | AGTTGTACTCCCAGATGTAATACAGACCTCAAGGATTaGGTCAGAGTCGATTTCCTGCTTCACGGCCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SCTPRCNTDLKD*VRVDFLLHGPG Trigger: CCCCGGGCCGTGAAGCAGGAAATCGACTCTGACTCAATCCTTGAGGTCTGTATTACATCTGGGAGTACAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624829.4 |
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| CDS TCA 72 bp | GGCGTTCATATTGAGCCCTGGGTGGGTATAACAGGGTaGGATGTGTTGTATCGTCAGCATGACTGCAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GVHIEPWVGITG*DVLYRQHDCKP Trigger: AGGCTTGCAGTCATGCTGACGATACAACACATCTCACCCTGTTATACCCACCCAGGGCTCAATATGAACGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS TCA 72 bp | GAAAAGAAGGGAGGAGAGCGACGAAGGCGTTCATATTaGGCCCTGGGTGGGTATAACAGGGTGAGATGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: EKKGGERRRRSY*ALGGYNRVRCV Trigger: AACACATCTCACCCTGTTATACCCACCCAGGGCTCAATATGAACGCCTTCGTCGCTCTCCTCCCTTCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS TCA 72 bp | GCACCTGCAGGCTCTCACCGACCACTGAAACAGCCATaGAAACCCTCATGCTTTTATACAGCAGGACAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: APAGSHRPLKQP*KPSCFYTAGQS Trigger: GCTTTGTCCTGCTGTATAAAAGCATGAGGGTTTTCATGGCTGTTTCAGTGGTCGGTGAGAGCCTGCAGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS CCA 72 bp | ATTTGGGAGGTTTCATCTGCCAGCAGGACAGGAGAGTaGCCACTGTCACCATGCAGGGATCTCTCTCTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: IWEVSSASRTGE*PLSPCRDLSLK Trigger: TTTAAGAGAGAGATCCCTGCATGGTGACAGTGGCCACTCTCCTGTCCTGCTGGCAGATGAAACCTCCCAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS CAA 72 bp | CCATCTTCTGGTGGCTCCCGAAATTCTTGGCATTTCTaGGCTTGTGGCAACATCACTGTAGTCTCCGCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: PSSGGSRNSWHF*ACGNITVVSAC Trigger: ACACGCGGAGACTACAGTGATGTTGCCACAAGCCAAGAAATGCCAAGAATTTCGGGAGCCACCAGAAGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000624829.4 ENST00000661899.1 |
||
| CDS TCA 72 bp | TTGTACCAGTGCAGGTTTACCTACAGCAGTGGTCCCTaGCCTTTTTGGTACCAGGGACCAGTTTTGTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LYQCRFTYSSGP*PFWYQGPVLWK Trigger: CTTCCACAAAACTGGTCCCTGGTACCAAAAAGGTCAGGGACCACTGCTGTAGGTAAACCTGCACTGGTACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000570035.5 ENST00000659470.1 ENST00000662171.1 |
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| CDS TCA 72 bp | GGGATGCTCTGTTCACTTCACGTGGGCTTAGATTTATaGGGTGCTGAGAAACAAGAGTGTGGGGCCCTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: GMLCSLHVGLDL*GAEKQECGALQ Trigger: TTGAAGGGCCCCACACTCTTGTTTCTCAGCACCTCATAAATCTAAGCCCACGTGAAGTGAACAGAGCATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000624829.4 ENST00000653104.1 |
||
| CDS TCA 72 bp | AAATGCCCCCAAGGGGCCCAGATCAAAGGCAGGCTTTaGATTGTGTACTTAGGTGGATCTTCCTGCCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: KCPQGAQIKGRL*IVYLGGSSCQR Trigger: TCTTTGGCAGGAAGATCCACCTAAGTACACAATTCAAAGCCTGCCTTTGATCTGGGCCCCTTGGGGGCATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS GCA 72 bp | CAGCAAGCAGGCAGCCAGAGATTTATCTACATTCACTaGTATCACCAGGGAGATGAATGGGGCCGATCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: QQAGSQRFIYIH*YHQGDEWGRSE Trigger: TTCAGATCGGCCCCATTCATCTCCCTGGTGATAGCAGTGAATGTAGATAAATCTCTGGCTGCCTGCTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000561611.2 ENST00000656218.1 ENST00000657725.1 ENST00000664155.1 ENST00000666555.1 |
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| CDS GCA 72 bp | CCAAGTGAATGCAAATACCCTTCTGCACGTGGATGCTaGAGCACTTTGGGAGGATTTGGGAGGTTTCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: PSECKYPSARGC*STLGGFGRFHL Trigger: CAGATGAAACCTCCCAAATCCTCCCAAAGTGCTGCAGCATCCACGTGCAGAAGGGTATTTGCATTCACTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS CCA 72 bp | AGAATCAGCTTATCTGTATTTGTAGTCTCAGCTACTTaGGTGGCTGAGGCTGGAAGATTCCTTGCGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RISLSVFVVSAT*VAEAGRFLAPR Trigger: CCTGGGCGCAAGGAATCTTCCAGCCTCAGCCACCCAAGTAGCTGAGACTACAAATACAGATAAGCTGATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563823.6 |
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| CDS CCA 72 bp | TGGTGGCTCCCGAAATTCTTGGCATTTCTTGGCTTGTaGCAACATCACTGTAGTCTCCGCGTGTCCTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: WWLPKFLAFLGL*QHHCSLRVSFL Trigger: AAGAAAGGACACGCGGAGACTACAGTGATGTTGCCACAAGCCAAGAAATGCCAAGAATTTCGGGAGCCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000624829.4 ENST00000661899.1 |
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| CDS CCA 72 bp | CTGCCTCTTCCATCTTCTGGTGGCTCCCGAAATTCTTaGCATTTCTTGGCTTGTGGCAACATCACTGTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LPLPSSGGSRNS*HFLACGNITVV Trigger: GACTACAGTGATGTTGCCACAAGCCAAGAAATGCCAAGAATTTCGGGAGCCACCAGAAGATGGAAGAGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000624829.4 ENST00000661899.1 |
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| CDS CAA 72 bp | CCTGCCTCTTCCATCTTCTGGTGGCTCCCGAAATTCTaGGCATTTCTTGGCTTGTGGCAACATCACTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: PASSIFWWLPKF*AFLGLWQHHCS Trigger: ACTACAGTGATGTTGCCACAAGCCAAGAAATGCCAAGAATTTCGGGAGCCACCAGAAGATGGAAGAGGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000624829.4 ENST00000661899.1 |
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| CDS TCA 72 bp | GGCTCCTTCCTGTCTTCAAAGCCAGCAATAATCAGTTaGGTCCTTCTCAGGCTGATGCTTCTCTGGTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GSFLSSKPAIIS*VLLRLMLLWFF Trigger: GAAGAACCAGAGAAGCATCAGCCTGAGAAGGACTCAACTGATTATTGCTGGCTTTGAAGACAGGAAGGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000570152.2 ENST00000657725.1 |
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| CDS TCA 72 bp | CTTTCCTTCCTTTCTTTTGGCCCTTGCATGTTCAAGTaGTGCCAAGGAAATCCGAGGAGATGCAGCTCGATC | + |
|
Preference number: 6 (lower is better) Translates to: LSFLSFGPCMFK*CQGNPRRCSSI Trigger: GATCGAGCTGCATCTCCTCGGATTTCCTTGGCATCACTTGAACATGCAAGGGCCAAAAGAAAGGAAGGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669279.1 |
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| CDS GCA 72 bp | CTTCTGCAGGAGCTGGCTTTGAAGGCTTGGGATTCTTaGATCTCGCTATTCCAGCCTGTATGTTATCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLQELALKAWDS*ISLFQPVCYLA Trigger: AGCAAGATAACATACAGGCTGGAATAGCGAGATGCAAGAATCCCAAGCCTTCAAAGCCAGCTCCTGCAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624829.4 ENST00000653104.1 ENST00000661899.1 |
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| CDS GCA 72 bp | AATGGTGTCCTTCCTTACAATGAGGCACCAAGTGAATaGAAATACCCTTCTGCACGTGGATGCTGCAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: NGVLPYNEAPSE*KYPSARGCCST Trigger: AGTGCTGCAGCATCCACGTGCAGAAGGGTATTTGCATTCACTTGGTGCCTCATTGTAAGGAAGGACACCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS CAA 72 bp | TCTTCTGCAGGAGCTGGCTTTGAAGGCTTGGGATTCTaGCATCTCGCTATTCCAGCCTGTATGTTATCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSAGAGFEGLGF*HLAIPACMLSC Trigger: GCAAGATAACATACAGGCTGGAATAGCGAGATGCAAGAATCCCAAGCCTTCAAAGCCAGCTCCTGCAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624829.4 ENST00000653104.1 ENST00000661899.1 |
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| CDS CAA 72 bp | GAGGAGATGCAGCTCGATCTGTCACATCTTCTGTCTTaGTTAAGGCAGCTCAGACCTCAAGGATTGAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: EEMQLDLSHLLS*LRQLRPQGLSQ Trigger: CTGACTCAATCCTTGAGGTCTGAGCTGCCTTAACAAAGACAGAAGATGTGACAGATCGAGCTGCATCTCCTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669279.1 |
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| CDS TCA 72 bp | AGGGTTTCTGCTCCTATGAAAATCTCATGTCACTACTaGTCTGACAGGAGGTGGAGCTTAGGCAGTAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RVSAPMKISCHY*SDRRWSLGSSA Trigger: AGCACTACTGCCTAAGCTCCACCTCCTGTCAGATCAGTAGTGACATGAGATTTTCATAGGAGCAGAAACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000570035.5 ENST00000659470.1 ENST00000662171.1 |
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| CDS TCA 72 bp | CTGTTCACTTCACGTGGGCTTAGATTTATGAGGTGCTaGGAAACAAGAGTGTGGGGCCCTTCAAGTTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: LFTSRGLRFMRC*ETRVWGPSSCT Trigger: AGTACAACTTGAAGGGCCCCACACTCTTGTTTCTCAGCACCTCATAAATCTAAGCCCACGTGAAGTGAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000624829.4 ENST00000653104.1 |
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| CDS TCA 72 bp | ATTAACAGAAGCAGCAGTAGCTGTGGAAAGAGTACTTaGCCAGGAGTCCTTAGCTTCAGGCCACAGCTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: INRSSSSCGKST*PGVLSFRPQLQ Trigger: TTGAAGCTGTGGCCTGAAGCTAAGGACTCCTGGTCAAGTACTCTTTCCACAGCTACTGCTGCTTCTGTTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653104.1 |
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| CDS TCA 72 bp | TGTATCGTCAGCATGACTGCAAGCCTGGTGAGCTTGTaGTTCTCCAAGGAGACAAAATATCCAAATGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CIVSMTASLVSL*FSKETKYPNGR Trigger: CCTCCCATTTGGATATTTTGTCTCCTTGGAGAATCACAAGCTCACCAGGCTTGCAGTCATGCTGACGATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS CAA 72 bp | GTGCAGGTTTACCTACAGCAGTGGTCCCTGACCTTTTaGGTACCAGGGACCAGTTTTGTGGAAGACAATTTT | + |
|
Preference number: 6 (lower is better) Translates to: VQVYLQQWSLTF*VPGTSFVEDNF Trigger: AAAATTGTCTTCCACAAAACTGGTCCCTGGTACCAAAAAGGTCAGGGACCACTGCTGTAGGTAAACCTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000570035.5 ENST00000659470.1 ENST00000662171.1 |
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| CDS CAA 72 bp | TGGCTCCTTCCTGTCTTCAAAGCCAGCAATAATCAGTaGAGTCCTTCTCAGGCTGATGCTTCTCTGGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: WLLPVFKASNNQ*SPSQADASLVL Trigger: AAGAACCAGAGAAGCATCAGCCTGAGAAGGACTCAACTGATTATTGCTGGCTTTGAAGACAGGAAGGAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000570152.2 ENST00000657725.1 |
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| CDS TCA 72 bp | ACAATTTTTCCACACATGGGGGCGGTGGTTTCAGGATaGAACTGTTCCACCTCAGATCATCAGGCATTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: TIFPHMGAVVSG*NCSTSDHQALD Trigger: ATCTAATGCCTGATGATCTGAGGTGGAACAGTTTCATCCTGAAACCACCGCCCCCATGTGTGGAAAAATTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000570035.5 ENST00000659470.1 ENST00000662171.1 |
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| CDS CCA 72 bp | TGGCACCTACTGTATGTCAGGCACTTTACACGTTCTTaGGAAGATAACAGTGACCTTGATCTGATGTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: WHLLYVRHFTRS*EDNSDLDLMSE Trigger: CTCAGACATCAGATCAAGGTCACTGTTATCTTCCCAAGAACGTGTAAAGTGCCTGACATACAGTAGGTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS GCA 72 bp | AAGGTCCATCATGACATCAGACTCTGCAGCAGGTTGTaGTGTGATAAAAGCCCAAGAAAGATGCCTGAAATA | + |
|
Preference number: 6 (lower is better) Translates to: KVHHDIRLCSRL*CDKSPRKMPEI Trigger: TATTTCAGGCATCTTTCTTGGGCTTTTATCACAGCACAACCTGCTGCAGAGTCTGATGTCATGATGGACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653104.1 |
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| CDS GCA 72 bp | AAGCTGACAATAAAGGTCCATCATGACATCAGACTCTaGAGCAGGTTGTGCTGTGATAAAAGCCCAAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: KLTIKVHHDIRL*SRLCCDKSPRK Trigger: CTTTCTTGGGCTTTTATCACAGCACAACCTGCTGCAGAGTCTGATGTCATGATGGACCTTTATTGTCAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653104.1 |
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| CDS CCA 72 bp | ACAGTCAGAAGTTCCCAAACTGAAAAGATTGTATCCTaGACATCCAAGCAGATGAAGGATTCAGGGCGAACA | + |
|
Preference number: 6 (lower is better) Translates to: TVRSSQTEKIVS*TSKQMKDSGRT Trigger: TGTTCGCCCTGAATCCTTCATCTGCTTGGATGTCCAGGATACAATCTTTTCAGTTTGGGAACTTCTGACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000624829.4 ENST00000653104.1 |
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| CDS TCA 72 bp | AAACTGAAAAGATTGTATCCTGGACATCCAAGCAGATaGAGGATTCAGGGCGAACAGATTTGTATCCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: KLKRLYPGHPSR*RIQGEQICILA Trigger: TGCCAGGATACAAATCTGTTCGCCCTGAATCCTTCATCTGCTTGGATGTCCAGGATACAATCTTTTCAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000624829.4 ENST00000653104.1 |
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| CDS CAA 90 bp | ATATATTTGAACAGCCAAAGCCTTGCAAGAATATTTGATTGGCCTTaGTTTACCGAGGGTTTCCAGTATCTCCCTCTCTACTTCATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: IYLNSQSLARIFDWP*FTEGFQYLPLYFMG Trigger: CCCCATGAAGTAGAGAGGGAGATACTGGAAACCCTCGGTAAACAAAGGCCAATCAAATATTCTTGCAAGGCTTTGGCTGTTCAAATATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS TCA 72 bp | TTGTGTTTGGAGTTCACAATAGGGTTTCTGCTCCTATaGAAATCTCATGTCACTACTGATCTGACAGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LCLEFTIGFLLL*KSHVTTDLTGG Trigger: ACCTCCTGTCAGATCAGTAGTGACATGAGATTTTCATAGGAGCAGAAACCCTATTGTGAACTCCAAACACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000570035.5 ENST00000659470.1 ENST00000662171.1 |
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| CDS TCA 72 bp | AGAAATCTAGGTGTATTCATCTGTTTTCTACTGCTGTaGGATCAAGGTGTCACAGTGCTGCATTCCTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RNLGVFICFLLL*DQGVTVLHSFL Trigger: CAGAAAGGAATGCAGCACTGTGACACCTTGATCTCACAGCAGTAGAAAACAGATGAATACACCTAGATTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570152.2 |
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| CDS TCA 72 bp | TCAGCAGTCAGATCTAGGACCCATCCACATCCAGTATaGTCTTATCTTAACCAATTACATCTGTCTGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: SAVRSRTHPHPV*SYLNQLHLSGT Trigger: AGTTCCAGACAGATGTAATTGGTTAAGATAAGATCATACTGGATGTGGATGGGTCCTAGATCTGACTGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624829.4 |
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| CDS TCA 72 bp | GGAAGAAATCTAGGTGTATTCATCTGTTTTCTACTGTaGGATCAAGGTGTCACAGTGCTGCATTCCTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GRNLGVFICFLL*DQGVTVLHSFL Trigger: CAGAAAGGAATGCAGCACTGTGACACCTTGATCTCACAGTAGAAAACAGATGAATACACCTAGATTTCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657725.1 |
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| CDS CCA 72 bp | TATTTGAACAGCCAAAGCCTTGCAAGAATATTTGATTaGCCTTTGTTTACCGAGGGTTTCCAGTATCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: YLNSQSLARIFD*PLFTEGFQYLP Trigger: AGGGAGATACTGGAAACCCTCGGTAAACAAAGGCCAATCAAATATTCTTGCAAGGCTTTGGCTGTTCAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS CAA 90 bp | CAACTAGAAATCATAAGGAAAGAATACTGCTTGTATAATCCTGGATaGCAATTGCACACAGCCTCTGCTGGGAGAAGAGAGGGAATATTT | + |
|
Preference number: 6 (lower is better) Translates to: QLEIIRKEYCLYNPG*QLHTASAGRREGIF Trigger: AAATATTCCCTCTCTTCTCCCAGCAGAGGCTGTGTGCAATTGCAATCCAGGATTATACAAGCAGTATTCTTTCCTTATGATTTCTAGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000561611.2 ENST00000656218.1 ENST00000657725.1 ENST00000664155.1 ENST00000666555.1 |
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| CDS TCA 72 bp | TTATCTAAGCCAAATGGAGTCCAAAATACTGACCCTTaGCTGCCAGTTAGAATAGTCCCTAATCCTCAATCA | + |
|
Preference number: 6 (lower is better) Translates to: LSKPNGVQNTDP*LPVRIVPNPQS Trigger: TGATTGAGGATTAGGGACTATTCTAACTGGCAGTCAAGGGTCAGTATTTTGGACTCCATTTGGCTTAGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000624829.4 ENST00000653104.1 |
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| CDS TCA 72 bp | CCACATTTCACTGGCAAAAGAAAGTCTTACCAAGCTTaGTGTCAAAGAGACAGTCATCTCATATGGATAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PHFTGKRKSYQA*CQRDSHLIWIG Trigger: ACCTATCCATATGAGATGACTGTCTCTTTGACATCAAGCTTGGTAAGACTTTCTTTTGCCAGTGAAATGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669279.1 |
||
| CDS GCA 72 bp | CCACTCTTCCTACAAAAGGTAACAAACAATAAACACTaGTCTATATATTGTTTCCCTTCACCCCACCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PLFLQKVTNNKH*SIYCFPSPHQL Trigger: AAGCTGGTGGGGTGAAGGGAAACAATATATAGAGCAGTGTTTATTGTTTGTTACCTTTTGTAGGAAGAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000659470.1 ENST00000662171.1 |
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| CDS GCA 72 bp | GTGGGTTCAGTTAATTACCTTAGAGAAGACACTGACTaGCATATATTTGAACAGCCAAAGCCTTGCAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: VGSVNYLREDTD*HIFEQPKPCKN Trigger: ATTCTTGCAAGGCTTTGGCTGTTCAAATATATGGCAGTCAGTGTCTTCTCTAAGGTAATTAACTGAACCCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS CCA 72 bp | CCAGATCAAAGGCAGGCTTTGAATTGTGTACTTAGGTaGATCTTCCTGCCAAAGACATTAATGCGATTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: PDQRQALNCVLR*IFLPKTLMRLK Trigger: TTTTAATCGCATTAATGTCTTTGGCAGGAAGATCCACCTAAGTACACAATTCAAAGCCTGCCTTTGATCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
||
| CDS CAA 72 bp | TCCACATTTCACTGGCAAAAGAAAGTCTTACCAAGCTaGATGTCAAAGAGACAGTCATCTCATATGGATAGG | + |
|
Preference number: 6 (lower is better) Translates to: STFHWQKKVLPS*MSKRQSSHMDR Trigger: CCTATCCATATGAGATGACTGTCTCTTTGACATCAAGCTTGGTAAGACTTTCTTTTGCCAGTGAAATGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669279.1 |
||
| CDS CAA 90 bp | TCACTTATATCCACATTTCACTGGCAAAAGAAAGTCTTACCAAGCTaGATGTCAAAGAGACAGTCATCTCATATGGATAGGTGCTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLISTFHWQKKVLPS*MSKRQSSHMDRCSL Trigger: AAGAGAGCACCTATCCATATGAGATGACTGTCTCTTTGACATCAAGCTTGGTAAGACTTTCTTTTGCCAGTGAAATGTGGATATAAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669279.1 |
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| CDS TCA 72 bp | CATATATTTGAACAGCCAAAGCCTTGCAAGAATATTTaGTTGGCCTTTGTTTACCGAGGGTTTCCAGTATCT | + |
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Preference number: 6 (lower is better) Translates to: HIFEQPKPCKNI*LAFVYRGFPVS Trigger: AGATACTGGAAACCCTCGGTAAACAAAGGCCAATCAAATATTCTTGCAAGGCTTTGGCTGTTCAAATATATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS TCA 72 bp | CGACCTGTGGTTTTAAATACAGTAGCATCTAAGCACTaGTACAGACCTGCAATTATGTCAATGGACATTCTA | + |
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Preference number: 6 (lower is better) Translates to: RPVVLNTVASKH*YRPAIMSMDIL Trigger: TAGAATGTCCATTGACATAATTGCAGGTCTGTATCAGTGCTTAGATGCTACTGTATTTAAAACCACAGGTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668081.1 |
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| CDS GCA 72 bp | CAGTCTTTGGTTGCAGAAAGCTTCTCTGTTGATGATTaGAGTTTAAGCTCTTCTTGTTTCTTTGCCATTCTT | + |
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Preference number: 6 (lower is better) Translates to: QSLVAESFSVDD*SLSSSCFFAIL Trigger: AAGAATGGCAAAGAAACAAGAAGAGCTTAAACTGCAATCATCAACAGAGAAGCTTTCTGCAACCAAAGACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664155.1 |
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| CDS CAA 90 bp | CAGGATTTAAGTACCAACCTGAGTCTTCTGTTCTCTAGGTCAATGTaGAAAGTTTATTTCTACAGTAAAACACACGTCTCACATTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: QDLSTNLSLLFSRSM*KVYFYSKTHVSHSW Trigger: CCAAGAATGTGAGACGTGTGTTTTACTGTAGAAATAAACTTTCAACATTGACCTAGAGAACAGAAGACTCAGGTTGGTACTTAAATCCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000624829.4 ENST00000653104.1 |
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| CDS CAA 90 bp | TCACTAGCTATCAAAATTTCTACATTAGCTTCTGTCCTTTGGGTCTaGGTAAGAGGGAAATTGTCAAGTTTTCAGGGTTTGGTCTTGATT | + |
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Preference number: 6 (lower is better) Translates to: SLAIKISTLASVLWV*VRGKLSSFQGLVLI Trigger: AATCAAGACCAAACCCTGAAAACTTGACAATTTCCCTCTTACCAAGACCCAAAGGACAGAAGCTAATGTAGAAATTTTGATAGCTAGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS CAA 90 bp | TGGGTTCAGTTAATTACCTTAGAGAAGACACTGACTGCCATATATTaGAACAGCCAAAGCCTTGCAAGAATATTTGATTGGCCTTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: WVQLITLEKTLTAIY*NSQSLARIFDWPLF Trigger: AAACAAAGGCCAATCAAATATTCTTGCAAGGCTTTGGCTGTTCAAATATATGGCAGTCAGTGTCTTCTCTAAGGTAATTAACTGAACCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664779.1 |
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| CDS GCA 72 bp | TTCACTTTGGTTGCAGAAAGCTTCTCTGTTGATGATTaGAGTTTAAGCTCTTCTTGTTTCTTTGCCATTCTT | + |
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Preference number: 6 (lower is better) Translates to: FTLVAESFSVDD*SLSSSCFFAIL Trigger: AAGAATGGCAAAGAAACAAGAAGAGCTTAAACTGCAATCATCAACAGAGAAGCTTTCTGCAACCAAAGTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000563770.5 ENST00000563823.6 ENST00000570152.2 ENST00000624829.4 ENST00000655530.1 ENST00000656218.1 ENST00000657725.1 ENST00000659470.1 ENST00000662171.1 ENST00000668081.1 |
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| CDS TCA 72 bp | AATATAGCTCATGCATTGATAATTGTTGAGGCTAGGTaGTGGGTATCAAGGTTAGTTAACCTATTCTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: NIAHALIIVEAR*WVSRLVNLFFL Trigger: AAGAAAGAATAGGTTAACTAACCTTGATACCCATCACCTAGCCTCAACAATTATCAATGCATGAGCTATATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659470.1 ENST00000662171.1 |
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| CDS CCA 72 bp | GTTTATTTCTACAGTAAAACACACGTCTCACATTCTTaGTGTTGCCATATAAATCAAACAAAGAGAACTGCA | + |
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Preference number: 6 (lower is better) Translates to: VYFYSKTHVSHS*CCHINQTKRTA Trigger: TGCAGTTCTCTTTGTTTGATTTATATGGCAACACCAAGAATGTGAGACGTGTGTTTTACTGTAGAAATAAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000624829.4 ENST00000653104.1 |
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| CDS CCA 72 bp | GGACGATACAAAGCAAATATGGTAAATTTGGGTATCTaGGGGAAGAGTATACAGAAATTCTTTGTAATATTC | + |
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Preference number: 6 (lower is better) Translates to: GRYKANMVNLGI*GKSIQKFFVIF Trigger: GAATATTACAAAGAATTTCTGTATACTCTTCCCCCAGATACCCAAATTTACCATATTTGCTTTGTATCGTCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659470.1 ENST00000662171.1 |
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