Pregenerated sensors for LINC01570 (Homo sapiens)
Ensembl gene IDs: ENSG00000260338Ensembl transcript IDs: ENST00000561572.2, ENST00000566218.2, ENST00000653860.1, ENST00000656878.1, ENST00000662976.1
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCTGGGAAGGAAGTAAGGCGCACACGCCACCTGGTGGCCGCTTCCTaGAGCTGTCACTCCGGACACCGCCCCTGGGAGGGAGCTCATCTC | + |
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Preference number: 5 (lower is better) Translates to: PGKEVRRTRHLVAAS*SCHSGHRPWEGAHL Trigger: GAGATGAGCTCCCTCCCAGGGGCGGTGTCCGGAGTGACAGCTCCAGGAAGCGGCCACCAGGTGGCGTGTGCGCCTTACTTCCTTCCCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656878.1 |
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| CDS CCA 90 bp | TCCTGGAACCCCAGCACCACCCTCTGCCTCCCGCGGCTGGAAACCTaGGAAGGAAGTAAGGCGCACACGCCACCTGGTGGCCGCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: SWNPSTTLCLPRLET*EGSKAHTPPGGRFL Trigger: CAGGAAGCGGCCACCAGGTGGCGTGTGCGCCTTACTTCCTTCCCAGGTTTCCAGCCGCGGGAGGCAGAGGGTGGTGCTGGGGTTCCAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656878.1 |
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| CDS TCA 90 bp | TGCCTGCAAGGGACAGTGTGGACCTACTTCGCGGGCAGACCGTGGTaGCAGTTCTTGCTCCCTCAGGCTGCTCTGCCGTCCCCTGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: CLQGTVWTYFAGRPW*QFLLPQAALPSPGL Trigger: CAGCCCAGGGGACGGCAGAGCAGCCTGAGGGAGCAAGAACTGTCACCACGGTCTGCCCGCGAAGTAGGTCCACACTGTCCCTTGCAGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561572.2 |
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| CDS GCA 90 bp | TCGCGGGCAGACCGTGGTGACAGTTCTTGCTCCCTCAGGCTGCTCTaGCGTCCCCTGGGCTGGCTTAACGGTCCATCTGTGAAAGGACCT | + |
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Preference number: 5 (lower is better) Translates to: SRADRGDSSCSLRLL*RPLGWLNGPSVKGP Trigger: AGGTCCTTTCACAGATGGACCGTTAAGCCAGCCCAGGGGACGGCAGAGCAGCCTGAGGGAGCAAGAACTGTCACCACGGTCTGCCCGCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000561572.2 ENST00000653860.1 ENST00000656878.1 ENST00000662976.1 |
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| CDS TCA 90 bp | GTTAGGGACCCCCAGCATCCTCGGTCTGGGACGAGGAGTCCACACTaGGAAACATCCGGACCAGCACTGCCTCAGGAGTGTCAGCGGAGT | + |
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Preference number: 5 (lower is better) Translates to: VRDPQHPRSGTRSPH*ETSGPALPQECQRS Trigger: ACTCCGCTGACACTCCTGAGGCAGTGCTGGTCCGGATGTTTCTCAGTGTGGACTCCTCGTCCCAGACCGAGGATGCTGGGGGTCCCTAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662976.1 |
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| CDS GCA 90 bp | TGGTTTGCTTGGTGGTCTGGCTCAGGGTCCCATGTGAGCTGGGGCTaGTGTCTTCTGAAGGCTGGAGTGGGGCTAGAGGGTCTGCACCCA | + |
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Preference number: 5 (lower is better) Translates to: WFAWWSGSGSHVSWG*CLLKAGVGLEGLHP Trigger: TGGGTGCAGACCCTCTAGCCCCACTCCAGCCTTCAGAAGACAGCAGCCCCAGCTCACATGGGACCCTGAGCCAGACCACCAAGCAAACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000566218.2 ENST00000662976.1 |
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| CDS CCA 90 bp | TGGGAGTGGTTTGCTTGGTGGTCTGGCTCAGGGTCCCATGTGAGCTaGGGCTGCTGTCTTCTGAAGGCTGGAGTGGGGCTAGAGGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: WEWFAWWSGSGSHVS*GCCLLKAGVGLEGL Trigger: CAGACCCTCTAGCCCCACTCCAGCCTTCAGAAGACAGCAGCCCCAGCTCACATGGGACCCTGAGCCAGACCACCAAGCAAACCACTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566218.2 ENST00000662976.1 |
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| CDS TCA 90 bp | CTCCGTTGCTCTCCCGCCCTCTCTCTTTTGAGACAGGGTCTTGCTTaGGACACACACGACCCTCTCTCTGCCCAGGAAGTTAAAGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: LRCSPALSLLRQGLA*DTHDPLSAQEVKGV Trigger: CACCCCTTTAACTTCCTGGGCAGAGAGAGGGTCGTGTGTGTCTCAAGCAAGACCCTGTCTCAAAAGAGAGAGGGCGGGAGAGCAACGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662976.1 |
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| CDS CCA 90 bp | CATTGCAGATGCTCCCTAGATGCAAAGTGTTGCTGGAGTGGAAGGTaGAAGGTTAGGGACCCCCAGCATCCTCGGTCTGGGACGAGGAGT | + |
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Preference number: 5 (lower is better) Translates to: HCRCSLDAKCCWSGR*KVRDPQHPRSGTRS Trigger: ACTCCTCGTCCCAGACCGAGGATGCTGGGGGTCCCTAACCTTCCACCTTCCACTCCAGCAACACTTTGCATCTAGGGAGCATCTGCAATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662976.1 |
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| CDS TCA 90 bp | GCCGGCTTGCTGTACCTCCTGCCACTGGGAGGGCAGGGAGTTTTCTaGATTTCCAATATGCCAGCAGTCTGTCCCGTTACCATCAGTCTG | + |
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Preference number: 5 (lower is better) Translates to: AGLLYLLPLGGQGVF*ISNMPAVCPVTISL Trigger: CAGACTGATGGTAACGGGACAGACTGCTGGCATATTGGAAATTCAGAAAACTCCCTGCCCTCCCAGTGGCAGGAGGTACAGCAAGCCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000561572.2 ENST00000653860.1 ENST00000656878.1 |
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| CDS CCA 90 bp | TCCTCGGAAGACTGTGGGAGCATACCATACAAGGGCACGAGTACCTaGAGGAGGGATCATGCGGCCATCTTGGAGTTTGGCTACCACACT | + |
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Preference number: 5 (lower is better) Translates to: SSEDCGSIPYKGTST*RRDHAAILEFGYHT Trigger: AGTGTGGTAGCCAAACTCCAAGATGGCCGCATGATCCCTCCTCCAGGTACTCGTGCCCTTGTATGGTATGCTCCCACAGTCTTCCGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566218.2 ENST00000662976.1 |
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| CDS GCA 90 bp | CTCATCTCCTTTCTCATTTCTGACACATCTAGTTTGACAGCTCACTaGAACCCCAGCATCACCTCAGTGCTTCGCGGGCAGACCGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: LISFLISDTSSLTAH*NPSITSVLRGQTVV Trigger: CACCACGGTCTGCCCGCGAAGCACTGAGGTGATGCTGGGGTTGCAGTGAGCTGTCAAACTAGATGTGTCAGAAATGAGAAAGGAGATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000566218.2 ENST00000656878.1 ENST00000662976.1 |
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| CDS CCA 90 bp | AGACTTTCATTATCTCACAGTTTCTGTGGGTCAGGAATCTGGGAGTaGTTTGCTTGGTGGTCTGGCTCAGGGTCCCATGTGAGCTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: RLSLSHSFCGSGIWE*FAWWSGSGSHVSWG Trigger: GCCCCAGCTCACATGGGACCCTGAGCCAGACCACCAAGCAAACCACTCCCAGATTCCTGACCCACAGAAACTGTGAGATAATGAAAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566218.2 ENST00000662976.1 |
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| CDS GCA 90 bp | ACCTCCTGCCACTGGGAGGGCAGGGAGTTTTCTGAATTTCCAATATaGCAGCAGTCTGTCCCGTTACCATCAGTCTGTCCCATTACCAGT | + |
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Preference number: 5 (lower is better) Translates to: TSCHWEGREFSEFPI*QQSVPLPSVCPITS Trigger: ACTGGTAATGGGACAGACTGATGGTAACGGGACAGACTGCTGGCATATTGGAAATTCAGAAAACTCCCTGCCCTCCCAGTGGCAGGAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000561572.2 ENST00000653860.1 ENST00000656878.1 |
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| CDS GCA 90 bp | CGAAGGCTTTGGGAATACTACGACGGTGATTCACATCCCAGTGTTTaGAGTAGGCATGCTCAGTTCAAGCTGAGGCTCCACTGCAACCCT | + |
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Preference number: 5 (lower is better) Translates to: RRLWEYYDGDSHPSV*SRHAQFKLRLHCNP Trigger: AGGGTTGCAGTGGAGCCTCAGCTTGAACTGAGCATGCCTACTGCAAACACTGGGATGTGAATCACCGTCGTAGTATTCCCAAAGCCTTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662976.1 |
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| CDS CCA 90 bp | AACATGCTCCTGCGCTGTACCTCGTGGAAAGGTGGACGAAGGCTTTaGGAATACTACGACGGTGATTCACATCCCAGTGTTTGCAGTAGG | + |
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Preference number: 5 (lower is better) Translates to: NMLLRCTSWKGGRRL*EYYDGDSHPSVCSR Trigger: CCTACTGCAAACACTGGGATGTGAATCACCGTCGTAGTATTCCCAAAGCCTTCGTCCACCTTTCCACGAGGTACAGCGCAGGAGCATGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662976.1 |
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| CDS CCA 90 bp | GAGTTGATGGTGGCCAGCTTTAACATGCTCCTGCGCTGTACCTCGTaGAAAGGTGGACGAAGGCTTTGGGAATACTACGACGGTGATTCA | + |
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Preference number: 5 (lower is better) Translates to: ELMVASFNMLLRCTS*KGGRRLWEYYDGDS Trigger: TGAATCACCGTCGTAGTATTCCCAAAGCCTTCGTCCACCTTTCCACGAGGTACAGCGCAGGAGCATGTTAAAGCTGGCCACCATCAACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662976.1 |
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| CDS GCA 90 bp | CTCATCTCCTTTCTCATTTCTGACACATCTAGTTTGACAGCTCACTaGAACCCCAGCATCACCTCAGTGCCTGCAAGGGACAGTGTGGAC | + |
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Preference number: 5 (lower is better) Translates to: LISFLISDTSSLTAH*NPSITSVPARDSVD Trigger: GTCCACACTGTCCCTTGCAGGCACTGAGGTGATGCTGGGGTTGCAGTGAGCTGTCAAACTAGATGTGTCAGAAATGAGAAAGGAGATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561572.2 |
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| CDS CCA 90 bp | AACAGCAGACTTTCATTATCTCACAGTTTCTGTGGGTCAGGAATCTaGGAGTGGTTTGCTTGGTGGTCTGGCTCAGGGTCCCATGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: NSRLSLSHSFCGSGI*EWFAWWSGSGSHVS Trigger: GCTCACATGGGACCCTGAGCCAGACCACCAAGCAAACCACTCCCAGATTCCTGACCCACAGAAACTGTGAGATAATGAAAGTCTGCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566218.2 ENST00000662976.1 |
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| CDS TCA 90 bp | AAGCCACATGGGAGGATGGGAGTGAATTCCTGTGTATCCCTTAGATaGTGTAGCCTCAGATGTCCTATGCCATCGCCTCTGCTGTATTCG | + |
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Preference number: 5 (lower is better) Translates to: KPHGRMGVNSCVSLR*CSLRCPMPSPLLYS Trigger: CGAATACAGCAGAGGCGATGGCATAGGACATCTGAGGCTACATCATCTAAGGGATACACAGGAATTCACTCCCATCCTCCCATGTGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566218.2 ENST00000662976.1 |
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| CDS GCA 90 bp | AGCAGTCTGTCCCGTTACCATCAGTCTGTCCCATTACCAGTGTTTTaGTCATTCTTGTATCCCCAGCACCTATGCCTGTGCCTGCATGTA | + |
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Preference number: 5 (lower is better) Translates to: SSLSRYHQSVPLPVF*SFLYPQHLCLCLHV Trigger: TACATGCAGGCACAGGCATAGGTGCTGGGGATACAAGAATGAGCAAAACACTGGTAATGGGACAGACTGATGGTAACGGGACAGACTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000561572.2 ENST00000653860.1 ENST00000656878.1 |
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| CDS TCA 90 bp | CTTCCACTTGCTTTCATATCTGCTGATGGCACAGGGTTGCAGCCCTaGTTATGGCTCCCAGAAGCTGAGATTTGTGGTCTAAAATTCGCG | + |
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Preference number: 5 (lower is better) Translates to: LPLAFISADGTGLQP*LWLPEAEICGLKFA Trigger: CGCGAATTTTAGACCACAAATCTCAGCTTCTGGGAGCCATAATCAGGGCTGCAACCCTGTGCCATCAGCAGATATGAAAGCAAGTGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653860.1 |
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| CDS CCA 90 bp | GGGAAACATAGGGATACTTTGTCTCTGTCTGGGTTGGTTTGGCAGTaGGTTTCATGGACCCCAGGCTCCACTTACTTCCTTCATCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: GKHRDTLSLSGLVWQ*VSWTPGSTYFLHQS Trigger: ACTTTGATGAAGGAAGTAAGTGGAGCCTGGGGTCCATGAAACCCACTGCCAAACCAACCCAGACAGAGACAAAGTATCCCTATGTTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000561572.2 ENST00000653860.1 ENST00000656878.1 |
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| CDS GCA 90 bp | CTCATCTCCTTTCTCATTTCTGACACATCTAGTTTGACAGCTCACTaGAACCCCAGCATCACCTCAGTGCCTGCATCCCATATATGTAGG | + |
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Preference number: 5 (lower is better) Translates to: LISFLISDTSSLTAH*NPSITSVPASHICR Trigger: CCTACATATATGGGATGCAGGCACTGAGGTGATGCTGGGGTTGCAGTGAGCTGTCAAACTAGATGTGTCAGAAATGAGAAAGGAGATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653860.1 |
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| CDS GCA 90 bp | GTCCCATTACCAGTGTTTTGCTCATTCTTGTATCCCCAGCACCTATaGCTGTGCCTGCATGTAATAGACTCTCAGTCGCTACTTGTTGAA | + |
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Preference number: 5 (lower is better) Translates to: VPLPVFCSFLYPQHL*LCLHVIDSQSLLVE Trigger: TTCAACAAGTAGCGACTGAGAGTCTATTACATGCAGGCACAGGCATAGGTGCTGGGGATACAAGAATGAGCAAAACACTGGTAATGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000561572.2 ENST00000653860.1 ENST00000656878.1 |
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| CDS TCA 90 bp | CTTAGCACCCTTCTTCTTTTCTTTGCTTTGATGCTCACACAACACTaGGCACCACCCTCTGACATCCAGTGTATTTTACTTACTTGCCGG | + |
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Preference number: 5 (lower is better) Translates to: LSTLLLFFALMLTQH*APPSDIQCILLTCR Trigger: CCGGCAAGTAAGTAAAATACACTGGATGTCAGAGGGTGGTGCTCAGTGTTGTGTGAGCATCAAAGCAAAGAAAAGAAGAAGGGTGCTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000561572.2 ENST00000653860.1 ENST00000656878.1 |
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| CDS TCA 90 bp | TGTGTTTATTTGTTCACTTCAATAAGCTGGAGGGTGGATGTGGCATaGGGACCATTCTCTGTGTTGAGGAAGGAGGGGAACAAACACATT | + |
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Preference number: 5 (lower is better) Translates to: CVYLFTSISWRVDVA*GPFSVLRKEGNKHI Trigger: AATGTGTTTGTTCCCCTCCTTCCTCAACACAGAGAATGGTCCTCATGCCACATCCACCCTCCAGCTTATTGAAGTGAACAAATAAACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662976.1 |
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| CDS GCA 90 bp | TTACCAGTGTTTTGCTCATTCTTGTATCCCCAGCACCTATGCCTGTaGCTGCATGTAATAGACTCTCAGTCGCTACTTGTTGAAAGACTA | + |
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Preference number: 5 (lower is better) Translates to: LPVFCSFLYPQHLCL*LHVIDSQSLLVERL Trigger: TAGTCTTTCAACAAGTAGCGACTGAGAGTCTATTACATGCAGGCACAGGCATAGGTGCTGGGGATACAAGAATGAGCAAAACACTGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000561572.2 ENST00000653860.1 ENST00000656878.1 |
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| CDS CCA 72 bp | CCCAGCACCACCCTCTGCCTCCCGCGGCTGGAAACCTaGGAAGGAAGTAAGGCGCACACGCCACCTGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: PSTTLCLPRLET*EGSKAHTPPGG Trigger: GCCACCAGGTGGCGTGTGCGCCTTACTTCCTTCCCAGGTTTCCAGCCGCGGGAGGCAGAGGGTGGTGCTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656878.1 |
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| CDS TCA 72 bp | GGGACAGTGTGGACCTACTTCGCGGGCAGACCGTGGTaGCAGTTCTTGCTCCCTCAGGCTGCTCTGCCGTCC | + |
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Preference number: 6 (lower is better) Translates to: GTVWTYFAGRPW*QFLLPQAALPS Trigger: GGACGGCAGAGCAGCCTGAGGGAGCAAGAACTGTCACCACGGTCTGCCCGCGAAGTAGGTCCACACTGTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561572.2 |
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| CDS TCA 72 bp | CCAGCATCACCTCAGTGCTTCGCGGGCAGACCGTGGTaGCAGTTCTTGCTCCCTCAGGCTGCTCTGCCGTCC | + |
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Preference number: 6 (lower is better) Translates to: PASPQCFAGRPW*QFLLPQAALPS Trigger: GGACGGCAGAGCAGCCTGAGGGAGCAAGAACTGTCACCACGGTCTGCCCGCGAAGCACTGAGGTGATGCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000566218.2 ENST00000656878.1 ENST00000662976.1 |
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| CDS GCA 72 bp | GGGCAGACCGTGGTGACAGTTCTTGCTCCCTCAGGCTaGTCTGCCGTCCCCTGGGCTGGCTTAACGGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: GQTVVTVLAPSG*SAVPWAGLTVH Trigger: ATGGACCGTTAAGCCAGCCCAGGGGACGGCAGAGCAGCCTGAGGGAGCAAGAACTGTCACCACGGTCTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000561572.2 ENST00000566218.2 ENST00000653860.1 ENST00000656878.1 ENST00000662976.1 |
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| CDS GCA 72 bp | GACCGTGGTGACAGTTCTTGCTCCCTCAGGCTGCTCTaGCGTCCCCTGGGCTGGCTTAACGGTCCATCTGTG | + |
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Preference number: 6 (lower is better) Translates to: DRGDSSCSLRLL*RPLGWLNGPSV Trigger: CACAGATGGACCGTTAAGCCAGCCCAGGGGACGGCAGAGCAGCCTGAGGGAGCAAGAACTGTCACCACGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000561572.2 ENST00000566218.2 ENST00000653860.1 ENST00000656878.1 ENST00000662976.1 |
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| CDS TCA 72 bp | TCTGCCGTCCCCTGGGCTGGCTTAACGGTCCATCTGTaGAAGGACCTTCGGCTTCCTGGAACCCCAGCACCA | + |
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Preference number: 6 (lower is better) Translates to: SAVPWAGLTVHL*KDLRLPGTPAP Trigger: TGGTGCTGGGGTTCCAGGAAGCCGAAGGTCCTTTCACAGATGGACCGTTAAGCCAGCCCAGGGGACGGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000561572.2 ENST00000653860.1 ENST00000656878.1 |
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| CDS TCA 72 bp | CCCCAGCATCCTCGGTCTGGGACGAGGAGTCCACACTaGGAAACATCCGGACCAGCACTGCCTCAGGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: PQHPRSGTRSPH*ETSGPALPQEC Trigger: ACACTCCTGAGGCAGTGCTGGTCCGGATGTTTCTCAGTGTGGACTCCTCGTCCCAGACCGAGGATGCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662976.1 |
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| CDS CCA 72 bp | TTTGCTTGGTGGTCTGGCTCAGGGTCCCATGTGAGCTaGGGCTGCTGTCTTCTGAAGGCTGGAGTGGGGCTA | + |
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Preference number: 6 (lower is better) Translates to: FAWWSGSGSHVS*GCCLLKAGVGL Trigger: TAGCCCCACTCCAGCCTTCAGAAGACAGCAGCCCCAGCTCACATGGGACCCTGAGCCAGACCACCAAGCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566218.2 ENST00000662976.1 |
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| CDS CCA 72 bp | TGGGTCAGGAATCTGGGAGTGGTTTGCTTGGTGGTCTaGCTCAGGGTCCCATGTGAGCTGGGGCTGCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: WVRNLGVVCLVV*LRVPCELGLLS Trigger: AGACAGCAGCCCCAGCTCACATGGGACCCTGAGCCAGACCACCAAGCAAACCACTCCCAGATTCCTGACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566218.2 ENST00000662976.1 |
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| CDS CCA 72 bp | TTCTGTGGGTCAGGAATCTGGGAGTGGTTTGCTTGGTaGTCTGGCTCAGGGTCCCATGTGAGCTGGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: FCGSGIWEWFAW*SGSGSHVSWGC Trigger: GCAGCCCCAGCTCACATGGGACCCTGAGCCAGACCACCAAGCAAACCACTCCCAGATTCCTGACCCACAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566218.2 ENST00000662976.1 |
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| CDS GCA 72 bp | TTGCTCTCCCGCCCTCTCTCTTTTGAGACAGGGTCTTaGTTGAGACACACACGACCCTCTCTCTGCCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: LLSRPLSFETGS*LRHTRPSLCPG Trigger: TCCTGGGCAGAGAGAGGGTCGTGTGTGTCTCAAGCAAGACCCTGTCTCAAAAGAGAGAGGGCGGGAGAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662976.1 |
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| CDS CCA 72 bp | AGGAGGCCACAGAGCTGCTTGAGTGTCCTCAGGACATaGTGGATGGTGTCTGCCAGGGTGAGAGATCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: RRPQSCLSVLRT*WMVSARVRDLR Trigger: TCTCAGATCTCTCACCCTGGCAGACACCATCCACCATGTCCTGAGGACACTCAAGCAGCTCTGTGGCCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566218.2 ENST00000662976.1 |
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| CDS CAA 90 bp | CTCCCGCTTTCTCTGCACCTCTCTGTCCTTCCCTCTTTCTCTCCGTaGCTCTCCCGCCCTCTCTCTTTTGAGACAGGGTCTTGCTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: LPLSLHLSVLPSFSP*LSRPLSFETGSCLR Trigger: TCTCAAGCAAGACCCTGTCTCAAAAGAGAGAGGGCGGGAGAGCAACGGAGAGAAAGAGGGAAGGACAGAGAGGTGCAGAGAAAGCGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662976.1 |
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| CDS GCA 72 bp | GCACCACCCTCTGACATCCAGTGTATTTTACTTACTTaGCGGCTTGCTGTACCTCCTGCCACTGGGAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: APPSDIQCILLT*RLAVPPATGRA Trigger: TGCCCTCCCAGTGGCAGGAGGTACAGCAAGCCGGCAAGTAAGTAAAATACACTGGATGTCAGAGGGTGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000561572.2 ENST00000653860.1 ENST00000656878.1 |
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| CDS GCA 72 bp | CTCTGCACCTCTCTGTCCTTCCCTCTTTCTCTCCGTTaGTCTCCCGCCCTCTCTCTTTTGAGACAGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LCTSLSFPLSLR*SPALSLLRQGL Trigger: AAGACCCTGTCTCAAAAGAGAGAGGGCGGGAGAGCAACGGAGAGAAAGAGGGAAGGACAGAGAGGTGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662976.1 |
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| CDS CAA 72 bp | CACCTAACAGCTATTGTCAGGAGGCCACAGAGCTGCTaGAGTGTCCTCAGGACATGGTGGATGGTGTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: HLTAIVRRPQSC*SVLRTWWMVSA Trigger: GGCAGACACCATCCACCATGTCCTGAGGACACTCAAGCAGCTCTGTGGCCTCCTGACAATAGCTGTTAGGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566218.2 ENST00000662976.1 |
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| CDS TCA 72 bp | CACAGGGTTGCAGCCCTGATTATGGCTCCCAGAAGCTaGGATTTGTGGTCTAAAATTCGCGGGCAGACCGTG | + |
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Preference number: 6 (lower is better) Translates to: HRVAALIMAPRS*DLWSKIRGQTV Trigger: CACGGTCTGCCCGCGAATTTTAGACCACAAATCTCAGCTTCTGGGAGCCATAATCAGGGCTGCAACCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653860.1 |
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| CDS GCA 72 bp | ACCATACAAGGGCACGAGTACCTGGAGGAGGGATCATaGGGCCATCTTGGAGTTTGGCTACCACACTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: TIQGHEYLEEGS*GHLGVWLPHSS Trigger: TGAAGAGTGTGGTAGCCAAACTCCAAGATGGCCGCATGATCCCTCCTCCAGGTACTCGTGCCCTTGTATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566218.2 ENST00000662976.1 |
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| CDS GCA 72 bp | CAGTTCAAGCTGAGGCTCCACTGCAACCCTGCTGAGTaGTGTGTTACCTTGGACAAATCCGTCAGCCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: QFKLRLHCNPAE*CVTLDKSVSLS Trigger: AGAGAGGCTGACGGATTTGTCCAAGGTAACACAGCACTCAGCAGGGTTGCAGTGGAGCCTCAGCTTGAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662976.1 |
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| CDS CCA 72 bp | GTGGCCAGCTTTAACATGCTCCTGCGCTGTACCTCGTaGAAAGGTGGACGAAGGCTTTGGGAATACTACGAC | + |
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Preference number: 6 (lower is better) Translates to: VASFNMLLRCTS*KGGRRLWEYYD Trigger: GTCGTAGTATTCCCAAAGCCTTCGTCCACCTTTCCACGAGGTACAGCGCAGGAGCATGTTAAAGCTGGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662976.1 |
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| CDS CAA 72 bp | CCTCTGACATCCAGTGTATTTTACTTACTTGCCGGCTaGCTGTACCTCCTGCCACTGGGAGGGCAGGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: PLTSSVFYLLAG*LYLLPLGGQGV Trigger: AACTCCCTGCCCTCCCAGTGGCAGGAGGTACAGCAAGCCGGCAAGTAAGTAAAATACACTGGATGTCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000561572.2 ENST00000653860.1 ENST00000656878.1 |
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| CDS TCA 72 bp | GGGGTTCTGTTGTCCCCGTTTAACAGAAGAGCAAGTTaGTGCCTCGTGAGGCAAGGGAACTTCCCAAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: GVLLSPFNRRAS*CLVRQGNFPRS Trigger: TGACCTTGGGAAGTTCCCTTGCCTCACGAGGCATCAACTTGCTCTTCTGTTAAACGGGGACAACAGAACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000561572.2 ENST00000653860.1 ENST00000656878.1 |
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| CDS CCA 72 bp | GCTTGTAATGTCACACTGAGTCTGTCTGGGTTGGTTTaGCAGTGGGTTTCATGGACCCCAGGCTCCACTTAC | + |
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Preference number: 6 (lower is better) Translates to: ACNVTLSLSGLV*QWVSWTPGSTY Trigger: GTAAGTGGAGCCTGGGGTCCATGAAACCCACTGCCAAACCAACCCAGACAGACTCAGTGTGACATTACAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566218.2 ENST00000662976.1 |
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| CDS CCA 72 bp | TTATCTCACAGTTTCTGTGGGTCAGGAATCTGGGAGTaGTTTGCTTGGTGGTCTGGCTCAGGGTCCCATGTG | + |
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Preference number: 6 (lower is better) Translates to: LSHSFCGSGIWE*FAWWSGSGSHV Trigger: CACATGGGACCCTGAGCCAGACCACCAAGCAAACCACTCCCAGATTCCTGACCCACAGAAACTGTGAGATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566218.2 ENST00000662976.1 |
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| CDS CCA 72 bp | CTGCGCTGTACCTCGTGGAAAGGTGGACGAAGGCTTTaGGAATACTACGACGGTGATTCACATCCCAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: LRCTSWKGGRRL*EYYDGDSHPSV Trigger: AACACTGGGATGTGAATCACCGTCGTAGTATTCCCAAAGCCTTCGTCCACCTTTCCACGAGGTACAGCGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662976.1 |
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| CDS GCA 72 bp | TTTCTCATTTCTGACACATCTAGTTTGACAGCTCACTaGAACCCCAGCATCACCTCAGTGCTTCGCGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: FLISDTSSLTAH*NPSITSVLRGQ Trigger: CTGCCCGCGAAGCACTGAGGTGATGCTGGGGTTGCAGTGAGCTGTCAAACTAGATGTGTCAGAAATGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000566218.2 ENST00000656878.1 ENST00000662976.1 |
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| CDS GCA 72 bp | TGGGAATACTACGACGGTGATTCACATCCCAGTGTTTaGAGTAGGCATGCTCAGTTCAAGCTGAGGCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: WEYYDGDSHPSV*SRHAQFKLRLH Trigger: GTGGAGCCTCAGCTTGAACTGAGCATGCCTACTGCAAACACTGGGATGTGAATCACCGTCGTAGTATTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662976.1 |
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| CDS CCA 72 bp | AGGGATACTTTGTCTCTGTCTGGGTTGGTTTGGCAGTaGGTTTCATGGACCCCAGGCTCCACTTACTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: RDTLSLSGLVWQ*VSWTPGSTYFL Trigger: AAGGAAGTAAGTGGAGCCTGGGGTCCATGAAACCCACTGCCAAACCAACCCAGACAGAGACAAAGTATCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000561572.2 ENST00000653860.1 ENST00000656878.1 |
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| CDS CCA 72 bp | CTGAGTCTGTCTGGGTTGGTTTGGCAGTGGGTTTCATaGACCCCAGGCTCCACTTACTTCCTTCATCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: LSLSGLVWQWVS*TPGSTYFLHQS Trigger: ACTTTGATGAAGGAAGTAAGTGGAGCCTGGGGTCCATGAAACCCACTGCCAAACCAACCCAGACAGACTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566218.2 ENST00000662976.1 |
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| CDS CCA 72 bp | AATGTCACACTGAGTCTGTCTGGGTTGGTTTGGCAGTaGGTTTCATGGACCCCAGGCTCCACTTACTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: NVTLSLSGLVWQ*VSWTPGSTYFL Trigger: AAGGAAGTAAGTGGAGCCTGGGGTCCATGAAACCCACTGCCAAACCAACCCAGACAGACTCAGTGTGACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566218.2 ENST00000662976.1 |
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| CDS TCA 72 bp | GCTTTCATATCTGCTGATGGCACAGGGTTGCAGCCCTaGTTATGGCTCCCAGAAGCTGAGATTTGTGGTCTA | + |
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Preference number: 6 (lower is better) Translates to: AFISADGTGLQP*LWLPEAEICGL Trigger: TAGACCACAAATCTCAGCTTCTGGGAGCCATAATCAGGGCTGCAACCCTGTGCCATCAGCAGATATGAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653860.1 |
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| CDS TCA 72 bp | TTGTTCACTTCAATAAGCTGGAGGGTGGATGTGGCATaGGGACCATTCTCTGTGTTGAGGAAGGAGGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: LFTSISWRVDVA*GPFSVLRKEGN Trigger: GTTCCCCTCCTTCCTCAACACAGAGAATGGTCCTCATGCCACATCCACCCTCCAGCTTATTGAAGTGAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662976.1 |
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| CDS GCA 72 bp | TTTCTCATTTCTGACACATCTAGTTTGACAGCTCACTaGAACCCCAGCATCACCTCAGTGCCTGCAAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: FLISDTSSLTAH*NPSITSVPARD Trigger: GTCCCTTGCAGGCACTGAGGTGATGCTGGGGTTGCAGTGAGCTGTCAAACTAGATGTGTCAGAAATGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561572.2 |
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| CDS GCA 72 bp | TCCCGTTACCATCAGTCTGTCCCATTACCAGTGTTTTaGTCATTCTTGTATCCCCAGCACCTATGCCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: SRYHQSVPLPVF*SFLYPQHLCLC Trigger: GCACAGGCATAGGTGCTGGGGATACAAGAATGAGCAAAACACTGGTAATGGGACAGACTGATGGTAACGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000561572.2 ENST00000653860.1 ENST00000656878.1 |
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| CDS GCA 72 bp | CTGTGTTACCTTGGACAAATCCGTCAGCCTCTCTTTTaGTTCTTCACCTGTGAGACGGGGCTGAGGTTAAGA | + |
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Preference number: 6 (lower is better) Translates to: LCYLGQIRQPLF*FFTCETGLRLR Trigger: TCTTAACCTCAGCCCCGTCTCACAGGTGAAGAAGCAAAAGAGAGGCTGACGGATTTGTCCAAGGTAACACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662976.1 |
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| CDS CCA 72 bp | TTTACTTACTTGCCGGCTTGCTGTACCTCCTGCCACTaGGAGGGCAGGGAGTTTTCTGAATTTCCAATATGC | + |
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Preference number: 6 (lower is better) Translates to: FTYLPACCTSCH*EGREFSEFPIC Trigger: GCATATTGGAAATTCAGAAAACTCCCTGCCCTCCCAGTGGCAGGAGGTACAGCAAGCCGGCAAGTAAGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000561572.2 ENST00000653860.1 ENST00000656878.1 |
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| CDS CAA 72 bp | GTCCCGTTACCATCAGTCTGTCCCATTACCAGTGTTTaGCTCATTCTTGTATCCCCAGCACCTATGCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: VPLPSVCPITSV*LILVSPAPMPV Trigger: CACAGGCATAGGTGCTGGGGATACAAGAATGAGCAAAACACTGGTAATGGGACAGACTGATGGTAACGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000561572.2 ENST00000653860.1 ENST00000656878.1 |
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| CDS CAA 72 bp | CAGTGCCTGCATCCCATATATGTAGGGATCTTCCACTaGCTTTCATATCTGCTGATGGCACAGGGTTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: QCLHPIYVGIFH*LSYLLMAQGCS Trigger: GCTGCAACCCTGTGCCATCAGCAGATATGAAAGCAAGTGGAAGATCCCTACATATATGGGATGCAGGCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653860.1 |
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| CDS CAA 90 bp | GCATCACCTCAGTGCCTGCATCCCATATATGTAGGGATCTTCCACTaGCTTTCATATCTGCTGATGGCACAGGGTTGCAGCCCTGATTAT | + |
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Preference number: 6 (lower is better) Translates to: ASPQCLHPIYVGIFH*LSYLLMAQGCSPDY Trigger: ATAATCAGGGCTGCAACCCTGTGCCATCAGCAGATATGAAAGCAAGTGGAAGATCCCTACATATATGGGATGCAGGCACTGAGGTGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653860.1 |
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| CDS TCA 72 bp | TGCTTTGATGCTCACACAACACTGAGCACCACCCTCTaGCATCCAGTGTATTTTACTTACTTGCCGGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: CFDAHTTLSTTL*HPVYFTYLPAC Trigger: GCAAGCCGGCAAGTAAGTAAAATACACTGGATGTCAGAGGGTGGTGCTCAGTGTTGTGTGAGCATCAAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000561572.2 ENST00000653860.1 ENST00000656878.1 |
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| CDS GCA 72 bp | TTTCTCATTTCTGACACATCTAGTTTGACAGCTCACTaGAACCCCAGCATCACCTCAGTGCCTGCATCCCAT | + |
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Preference number: 6 (lower is better) Translates to: FLISDTSSLTAH*NPSITSVPASH Trigger: ATGGGATGCAGGCACTGAGGTGATGCTGGGGTTGCAGTGAGCTGTCAAACTAGATGTGTCAGAAATGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653860.1 |
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| CDS TCA 72 bp | ACAGAAACAGAAATCCCAGAACTCTGTGGGTGGGTCTaGGTAATTCTTGTGGCTGGTACAGGAAAGAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: TETEIPELCGWV*VILVAGTGKSR Trigger: CCTACTCTTTCCTGTACCAGCCACAAGAATTACTCAGACCCACCCACAGAGTTCTGGGATTTCTGTTTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662976.1 |
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| CDS TCA 72 bp | GGAGGGTGGATGTGGCATGAGGACCATTCTCTGTGTTaGGGAAGGAGGGGAACAAACACATTTTTGATTTCT | + |
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Preference number: 6 (lower is better) Translates to: GGWMWHEDHSLC*GRRGTNTFLIS Trigger: AGAAATCAAAAATGTGTTTGTTCCCCTCCTTCCTCAACACAGAGAATGGTCCTCATGCCACATCCACCCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662976.1 |
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| CDS TCA 72 bp | ACAAATCCGTCAGCCTCTCTTTTGCTTCTTCACCTGTaGGACGGGGCTGAGGTTAAGACCTACTTCTTAATA | + |
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Preference number: 6 (lower is better) Translates to: TNPSASLLLLHL*DGAEVKTYFLI Trigger: TATTAAGAAGTAGGTCTTAACCTCAGCCCCGTCTCACAGGTGAAGAAGCAAAAGAGAGGCTGACGGATTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662976.1 |
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| CDS GCA 72 bp | TTTTGCTCATTCTTGTATCCCCAGCACCTATGCCTGTaGCTGCATGTAATAGACTCTCAGTCGCTACTTGTT | + |
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Preference number: 6 (lower is better) Translates to: FCSFLYPQHLCL*LHVIDSQSLLV Trigger: AACAAGTAGCGACTGAGAGTCTATTACATGCAGGCACAGGCATAGGTGCTGGGGATACAAGAATGAGCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000561572.2 ENST00000653860.1 ENST00000656878.1 |
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| CDS GCA 72 bp | GTGTATCCCTTAGATGATGTAGCCTCAGATGTCCTATaGCATCGCCTCTGCTGTATTCGATCAGTCATACAA | + |
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Preference number: 6 (lower is better) Translates to: VYPLDDVASDVL*HRLCCIRSVIQ Trigger: TTGTATGACTGATCGAATACAGCAGAGGCGATGGCATAGGACATCTGAGGCTACATCATCTAAGGGATACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566218.2 ENST00000662976.1 |
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| CDS TCA 72 bp | CTTCTTCTTTTCTTTGCTTTGATGCTCACACAACACTaGGCACCACCCTCTGACATCCAGTGTATTTTACTT | + |
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Preference number: 6 (lower is better) Translates to: LLLFFALMLTQH*APPSDIQCILL Trigger: AAGTAAAATACACTGGATGTCAGAGGGTGGTGCTCAGTGTTGTGTGAGCATCAAAGCAAAGAAAAGAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000561572.2 ENST00000653860.1 ENST00000656878.1 |
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| CDS CAA 72 bp | ATGTATGAAGCACGAAAGTATTGTATTGGCTGTCTCTaGCCCGTGACAGTTACACTGAACTTAGTGACTTCT | + |
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Preference number: 6 (lower is better) Translates to: MYEARKYCIGCL*PVTVTLNLVTS Trigger: AGAAGTCACTAAGTTCAGTGTAACTGTCACGGGCAAGAGACAGCCAATACAATACTTTCGTGCTTCATACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566218.2 ENST00000662976.1 |
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| CDS CAA 90 bp | GGAAAAATGATGTATGAAGCACGAAAGTATTGTATTGGCTGTCTCTaGCCCGTGACAGTTACACTGAACTTAGTGACTTCTAACAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: GKMMYEARKYCIGCL*PVTVTLNLVTSNSR Trigger: TCTGCTGTTAGAAGTCACTAAGTTCAGTGTAACTGTCACGGGCAAGAGACAGCCAATACAATACTTTCGTGCTTCATACATCATTTTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000566218.2 ENST00000662976.1 |
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| CDS CAA 72 bp | CAACCACACACCCAACTTTCTTATCCCACTTTTCAGTaGACCAAATGTTTGATCTCTGTTCTTTTAACATCC | + |
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Preference number: 6 (lower is better) Translates to: QPHTQLSYPTFQ*TKCLISVLLTS Trigger: GGATGTTAAAAGAACAGAGATCAAACATTTGGTCAACTGAAAAGTGGGATAAGAAAGTTGGGTGTGTGGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566218.2 |
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