Pregenerated sensors for LINC01568 (Homo sapiens)
Ensembl gene IDs: ENSG00000258779Ensembl transcript IDs: ENST00000554640.5, ENST00000555721.2, ENST00000557393.1, ENST00000561875.1, ENST00000562661.1, ENST00000562748.2, ENST00000641790.1, ENST00000655534.1, ENST00000656216.1, ENST00000662417.1, ENST00000663851.1, ENST00000664807.1, ENST00000665707.1, ENST00000666218.1, ENST00000666626.1, ENST00000667695.1, ENST00000668007.1, ENST00000669193.1, ENST00000669634.1, ENST00000669648.1, ENST00000670919.1, ENST00000670932.1, ENST00000671224.1
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TTGGGTTTCTGTGACCTTCCTCACCTCCACCATTGTCCCAGCAACTaGAGAACAGAAGGCCAGCCCAGCACTCCCAGCCCACTGTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: LGFCDLPHLHHCPSN*RTEGQPSTPSPLFH Trigger: GTGGAACAGTGGGCTGGGAGTGCTGGGCTGGCCTTCTGTTCTCCAGTTGCTGGGACAATGGTGGAGGTGAGGAAGGTCACAGAAACCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669193.1 |
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| CDS CCA 90 bp | CTTCCGGGGCAGGTAGAGAAGCCAAACACCAGCAGGCCTGGTGGCTaGGAAAGACAGTGTGCCCTCTGCGGAAGAACACAAGGTAATAAG | + |
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Preference number: 5 (lower is better) Translates to: LPGQVEKPNTSRPGG*ERQCALCGRTQGNK Trigger: CTTATTACCTTGTGTTCTTCCGCAGAGGGCACACTGTCTTTCCCAGCCACCAGGCCTGCTGGTGTTTGGCTTCTCTACCTGCCCCGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554640.5 |
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| CDS GCA 90 bp | AGGATGCTCAGAGCCGGCCAGCCAAGGGGACAGGGCTGGGCTTTGTaGCTCCATTTTAAGGCAGGCATCTGTTATCTAGAATTCAGCACG | + |
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Preference number: 5 (lower is better) Translates to: RMLRAGQPRGQGWAL*LHFKAGICYLEFST Trigger: CGTGCTGAATTCTAGATAACAGATGCCTGCCTTAAAATGGAGGCACAAAGCCCAGCCCTGTCCCCTTGGCTGGCCGGCTCTGAGCATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000554640.5 ENST00000666218.1 |
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| CDS GCA 90 bp | CTAGAATTCAGCACGTCCCCTGTCGCTGCGTGTCCATCCAAATGCTaGACAAGGCCCAAGGAGATTTCCAGGGAACAGAGAGAGAACCTC | + |
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Preference number: 5 (lower is better) Translates to: LEFSTSPVAACPSKC*TRPKEISREQRENL Trigger: GAGGTTCTCTCTCTGTTCCCTGGAAATCTCCTTGGGCCTTGTGCAGCATTTGGATGGACACGCAGCGACAGGGGACGTGCTGAATTCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554640.5 ENST00000666218.1 |
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| CDS GCA 90 bp | AGCCCGTCAGTCAGTTGCCACCTGTTCGGAAAAGGAACCACCAAATaGAGAGCGGCAGCTTGTTACCCACCTCTCAAACCCAAGTGCACT | + |
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Preference number: 5 (lower is better) Translates to: SPSVSCHLFGKGTTK*RAAACYPPLKPKCT Trigger: AGTGCACTTGGGTTTGAGAGGTGGGTAACAAGCTGCCGCTCTGCATTTGGTGGTTCCTTTTCCGAACAGGTGGCAACTGACTGACGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562748.2 |
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| CDS CCA 90 bp | GGCGATTGGCTGAGAGCGCCTTGCTGGTCCGATGTGCTCTCCAGGTaGGTTAAGTGCATTGCTTTGTCTTTATCTGGTCCAGTTCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: GDWLRAPCWSDVLSR*VKCIALSLSGPVPL Trigger: CAAGGGAACTGGACCAGATAAAGACAAAGCAATGCACTTAACCCACCTGGAGAGCACATCGGACCAGCAAGGCGCTCTCAGCCAATCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000562748.2 ENST00000641790.1 |
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| CDS TCA 90 bp | TTTTCTGAGGGAAAAGCAATTTCACAAGCCCTGCCTGCGTACAGATaGGCGGGACCACAAACCAGCTCAGAATGGCCACCGACATTCCCA | + |
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Preference number: 5 (lower is better) Translates to: FSEGKAISQALPAYR*AGPQTSSEWPPTFP Trigger: TGGGAATGTCGGTGGCCATTCTGAGCTGGTTTGTGGTCCCGCTCATCTGTACGCAGGCAGGGCTTGTGAAATTGCTTTTCCCTCAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554640.5 |
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| CDS GCA 90 bp | CCGTGGAGACCGAGCTGTGGACTCTTTGTTTGCCACAGATCTACTTaGCTGAGGGAATGGTTCAGCTCTTCCTTCCTTTTCATTCCCGTC | + |
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Preference number: 5 (lower is better) Translates to: PWRPSCGLFVCHRST*LREWFSSSFLFIPV Trigger: GACGGGAATGAAAAGGAAGGAAGAGCTGAACCATTCCCTCAGGCAAGTAGATCTGTGGCAAACAAAGAGTCCACAGCTCGGTCTCCACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554640.5 |
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| CDS GCA 90 bp | TATCTAGAATTCAGCACGTCCCCTGTCGCTGCGTGTCCATCCAAATaGTGCACAAGGCCCAAGGAGATTTCCAGGGAACAGAGAGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: YLEFSTSPVAACPSK*CTRPKEISREQREN Trigger: GTTCTCTCTCTGTTCCCTGGAAATCTCCTTGGGCCTTGTGCAGCATTTGGATGGACACGCAGCGACAGGGGACGTGCTGAATTCTAGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554640.5 ENST00000666218.1 |
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| CDS GCA 90 bp | AACACAGATGTCCTTCTCCACTTCAGAGAAAGCCCGTCAGTCAGTTaGCACCTGTTCGGAAAAGGAACCACCAAATGCAGAGCGGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: NTDVLLHFRESPSVS*HLFGKGTTKCRAAA Trigger: AGCTGCCGCTCTGCATTTGGTGGTTCCTTTTCCGAACAGGTGGCAACTGACTGACGGGCTTTCTCTGAAGTGGAGAAGGACATCTGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562748.2 |
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| CDS GCA 90 bp | CTGAGAGCGCCTTGCTGGTCCGATGTGCTCTCCAGGTGGGTTAAGTaGATTGCTTTGTCTTTATCTGGTCCAGTTCCCTTGTGTCATCTC | + |
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Preference number: 5 (lower is better) Translates to: LRAPCWSDVLSRWVK*IALSLSGPVPLCHL Trigger: GAGATGACACAAGGGAACTGGACCAGATAAAGACAAAGCAATGCACTTAACCCACCTGGAGAGCACATCGGACCAGCAAGGCGCTCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000562748.2 ENST00000641790.1 |
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| CDS CCA 90 bp | TTAATTCTCAGGATGCTCAGAGCCGGCCAGCCAAGGGGACAGGGCTaGGCTTTGTGCCTCCATTTTAAGGCAGGCATCTGTTATCTAGAA | + |
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Preference number: 5 (lower is better) Translates to: LILRMLRAGQPRGQG*ALCLHFKAGICYLE Trigger: TTCTAGATAACAGATGCCTGCCTTAAAATGGAGGCACAAAGCCCAGCCCTGTCCCCTTGGCTGGCCGGCTCTGAGCATCCTGAGAATTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000554640.5 ENST00000666218.1 |
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| CDS TCA 90 bp | CTTGCAAGAGTTGAAGTGGTCTTGCTCCAGGTTCTGGGTAAAGCCTaGGACCCTAAAGTGCAGAGTGGACCACGGTACATTGAACGATGG | + |
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Preference number: 5 (lower is better) Translates to: LARVEVVLLQVLGKA*DPKVQSGPRYIERW Trigger: CCATCGTTCAATGTACCGTGGTCCACTCTGCACTTTAGGGTCTCAGGCTTTACCCAGAACCTGGAGCAAGACCACTTCAACTCTTGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557393.1 ENST00000641790.1 |
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| CDS GCA 90 bp | CCAAACACCAGCAGGCCTGGTGGCTGGGAAAGACAGTGTGCCCTCTaGGGAAGAACACAAGGTAATAAGTGGCTTTTGCAGCAATTAAAC | + |
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Preference number: 5 (lower is better) Translates to: PNTSRPGGWERQCAL*GRTQGNKWLLQQLN Trigger: GTTTAATTGCTGCAAAAGCCACTTATTACCTTGTGTTCTTCCGCAGAGGGCACACTGTCTTTCCCAGCCACCAGGCCTGCTGGTGTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554640.5 |
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| CDS CCA 90 bp | ATGTCATCCCATTGGCTTGAGACCTCACGACCTTGTCAGGGACTCTaGCTTGTCCGAGTTGATTTCTTCTGCCCAAGTTCACCCTCTCTA | + |
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Preference number: 5 (lower is better) Translates to: MSSHWLETSRPCQGL*LVRVDFFCPSSPSL Trigger: TAGAGAGGGTGAACTTGGGCAGAAGAAATCAACTCGGACAAGCCAGAGTCCCTGACAAGGTCGTGAGGTCTCAAGCCAATGGGATGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000655534.1 ENST00000656216.1 ENST00000666626.1 ENST00000669634.1 ENST00000669648.1 ENST00000670919.1 |
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| CDS TCA 90 bp | GGAGACCGAGCTGTGGACTCTTTGTTTGCCACAGATCTACTTGCCTaGGGGAATGGTTCAGCTCTTCCTTCCTTTTCATTCCCGTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: GDRAVDSLFATDLLA*GNGSALPSFSFPSC Trigger: ACAAGACGGGAATGAAAAGGAAGGAAGAGCTGAACCATTCCCTCAGGCAAGTAGATCTGTGGCAAACAAAGAGTCCACAGCTCGGTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554640.5 |
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| CDS CCA 90 bp | GCTGTGAATTTCTTGCAAGAGTTGAAGTGGTCTTGCTCCAGGTTCTaGGTAAAGCCTGAGACCCTAAAGTGCAGAGTGGACCACGGTACA | + |
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Preference number: 5 (lower is better) Translates to: AVNFLQELKWSCSRF*VKPETLKCRVDHGT Trigger: TGTACCGTGGTCCACTCTGCACTTTAGGGTCTCAGGCTTTACCCAGAACCTGGAGCAAGACCACTTCAACTCTTGCAAGAAATTCACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641790.1 |
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| CDS GCA 90 bp | AAGTGGTCTTGCTCCAGGTTCTGGGTAAAGCCTGAGACCCTAAAGTaGAGAGTGGACCACGGTACATTGAACGATGGATTCTTTCTTAGC | + |
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Preference number: 5 (lower is better) Translates to: KWSCSRFWVKPETLK*RVDHGTLNDGFFLS Trigger: GCTAAGAAAGAATCCATCGTTCAATGTACCGTGGTCCACTCTGCACTTTAGGGTCTCAGGCTTTACCCAGAACCTGGAGCAAGACCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557393.1 ENST00000641790.1 |
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| CDS GCA 90 bp | GGTGTATTTTATTTACACACTAACCCTGCTGTGCATTTGGACACCTaGTCCCAGGTGTTAATTCCCTCTTACTTCCTGCCTACCGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: GVFYLHTNPAVHLDT*SQVLIPSYFLPTAG Trigger: GCCTGCGGTAGGCAGGAAGTAAGAGGGAATTAACACCTGGGAGCAGGTGTCCAAATGCACAGCAGGGTTAGTGTGTAAATAAAATACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669193.1 |
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| CDS CCA 90 bp | TCTGTGAATTTCTTGCAAGAGTTGAAGTGGTCTTGCTCCAGGTTCTaGGTAAAGCCTGAGACCCTAAAGTGCAGAGTGGACCACGGTACA | + |
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Preference number: 5 (lower is better) Translates to: SVNFLQELKWSCSRF*VKPETLKCRVDHGT Trigger: TGTACCGTGGTCCACTCTGCACTTTAGGGTCTCAGGCTTTACCCAGAACCTGGAGCAAGACCACTTCAACTCTTGCAAGAAATTCACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557393.1 |
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| CDS CCA 90 bp | TGGGCAACAGATCGAGACTCTGTGAATTTCTTGCAAGAGTTGAAGTaGTCTTGCTCCAGGTTCTGGGTAAAGCCTGAGACCCTAAAGTGC | + |
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Preference number: 5 (lower is better) Translates to: WATDRDSVNFLQELK*SCSRFWVKPETLKC Trigger: GCACTTTAGGGTCTCAGGCTTTACCCAGAACCTGGAGCAAGACCACTTCAACTCTTGCAAGAAATTCACAGAGTCTCGATCTGTTGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557393.1 |
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| CDS GCA 90 bp | ACAGATCGAGACTCTGTGAATTTCTTGCAAGAGTTGAAGTGGTCTTaGTCCAGGTTCTGGGTAAAGCCTGAGACCCTAAAGTGCAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: TDRDSVNFLQELKWS*SRFWVKPETLKCRV Trigger: CACTCTGCACTTTAGGGTCTCAGGCTTTACCCAGAACCTGGAGCAAGACCACTTCAACTCTTGCAAGAAATTCACAGAGTCTCGATCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557393.1 |
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| CDS GCA 90 bp | TCCTTCTTTGGTGTATCATCCTCCAGCCACTGTTTATTCTATAGCTaGACATCTTCTCCCACTGGAAGGTCTTCAGGGGCAATAACACGC | + |
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Preference number: 5 (lower is better) Translates to: SFFGVSSSSHCLFYS*TSSPTGRSSGAITR Trigger: GCGTGTTATTGCCCCTGAAGACCTTCCAGTGGGAGAAGATGTGCAGCTATAGAATAAACAGTGGCTGGAGGATGATACACCAAAGAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562748.2 |
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| CDS CCA 90 bp | AGCTGTGGACTCTTTGTTTGCCACAGATCTACTTGCCTGAGGGAATaGTTCAGCTCTTCCTTCCTTTTCATTCCCGTCTTGTGGGAAATG | + |
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Preference number: 5 (lower is better) Translates to: SCGLFVCHRSTCLRE*FSSSFLFIPVLWEM Trigger: CATTTCCCACAAGACGGGAATGAAAAGGAAGGAAGAGCTGAACCATTCCCTCAGGCAAGTAGATCTGTGGCAAACAAAGAGTCCACAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554640.5 |
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| CDS CCA 90 bp | TGGGAAAGACAGTGTGCCCTCTGCGGAAGAACACAAGGTAATAAGTaGCTTTTGCAGCAATTAAACACAAGAGCAAAGGTGAACCGCCAG | + |
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Preference number: 5 (lower is better) Translates to: WERQCALCGRTQGNK*LLQQLNTRAKVNRQ Trigger: CTGGCGGTTCACCTTTGCTCTTGTGTTTAATTGCTGCAAAAGCCACTTATTACCTTGTGTTCTTCCGCAGAGGGCACACTGTCTTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554640.5 |
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| CDS CCA 90 bp | AGAAGGTCAAAGCTCTCAATGAATGAGACTCCAGAAGTTGGAAGTTaGGTTTCTGTGACCTTCCTCACCTCCACCATTGTCCCAGCAACT | + |
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Preference number: 5 (lower is better) Translates to: RRSKLSMNETPEVGS*VSVTFLTSTIVPAT Trigger: AGTTGCTGGGACAATGGTGGAGGTGAGGAAGGTCACAGAAACCCAACTTCCAACTTCTGGAGTCTCATTCATTGAGAGCTTTGACCTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669193.1 |
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| CDS TCA 90 bp | TGGTTCAGCTCTTCCTTCCTTTTCATTCCCGTCTTGTGGGAAATGTaGAAACATGTAACAGGGAGAGAATATCCCCGCAAACTCCCGTCA | + |
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Preference number: 5 (lower is better) Translates to: WFSSSFLFIPVLWEM*KHVTGREYPRKLPS Trigger: TGACGGGAGTTTGCGGGGATATTCTCTCCCTGTTACATGTTTTCACATTTCCCACAAGACGGGAATGAAAAGGAAGGAAGAGCTGAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554640.5 |
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| CDS TCA 90 bp | CATACAATATGCTGTGAGAGAGAATGGACTGTGCCAGGGATGTACTaGGTCCTTGCAGTTCTCTCTAGTTTGTCAGTTAAGCAAGATGGC | + |
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Preference number: 5 (lower is better) Translates to: HTICCEREWTVPGMY*VLAVLSSLSVKQDG Trigger: GCCATCTTGCTTAACTGACAAACTAGAGAGAACTGCAAGGACTCAGTACATCCCTGGCACAGTCCATTCTCTCTCACAGCATATTGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000555721.2 ENST00000641790.1 ENST00000655534.1 ENST00000656216.1 ENST00000663851.1 ENST00000665707.1 ENST00000666626.1 ENST00000668007.1 ENST00000669193.1 ENST00000669634.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
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| CDS GCA 90 bp | TCATGTACCCTTAGGTCACTTCCAAATCTTGGCTGTTGTGAACAGTaGTTTTTATGTCATCCCATTGGCTTGAGACCTCACGACCTTGTC | + |
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Preference number: 5 (lower is better) Translates to: SCTLRSLPNLGCCEQ*FLCHPIGLRPHDLV Trigger: GACAAGGTCGTGAGGTCTCAAGCCAATGGGATGACATAAAAAGCACTGTTCACAACAGCCAAGATTTGGAAGTGACCTAAGGGTACATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669648.1 |
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| CDS CCA 90 bp | CTGAACTTCAGAAGCTTGTCAGTTGCTCAAATAATGCAGGGACCATaGGTTTTTAGTGTAGCGTGGAAGCAGCACTCACACAGTCTCATA | + |
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Preference number: 5 (lower is better) Translates to: LNFRSLSVAQIMQGP*VFSVAWKQHSHSLI Trigger: TATGAGACTGTGTGAGTGCTGCTTCCACGCTACACTAAAAACCCATGGTCCCTGCATTATTTGAGCAACTGACAAGCTTCTGAAGTTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 17 transcripts: ENST00000554640.5 ENST00000555721.2 ENST00000561875.1 ENST00000562661.1 ENST00000641790.1 ENST00000655534.1 ENST00000656216.1 ENST00000663851.1 ENST00000665707.1 ENST00000666626.1 ENST00000668007.1 ENST00000669193.1 ENST00000669634.1 ENST00000669648.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
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| CDS CCA 90 bp | GCCACTGTTTATTCTATAGCTGTGAATTTCTTGCAAGAGTTGAAGTaGTCTTGCTCCAGGTTCTGGGTAAAGCCTGAGACCCTAAAGTGC | + |
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Preference number: 5 (lower is better) Translates to: ATVYSIAVNFLQELK*SCSRFWVKPETLKC Trigger: GCACTTTAGGGTCTCAGGCTTTACCCAGAACCTGGAGCAAGACCACTTCAACTCTTGCAAGAAATTCACAGCTATAGAATAAACAGTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641790.1 |
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| CDS GCA 90 bp | GTTTATTCTATAGCTGTGAATTTCTTGCAAGAGTTGAAGTGGTCTTaGTCCAGGTTCTGGGTAAAGCCTGAGACCCTAAAGTGCAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: VYSIAVNFLQELKWS*SRFWVKPETLKCRV Trigger: CACTCTGCACTTTAGGGTCTCAGGCTTTACCCAGAACCTGGAGCAAGACCACTTCAACTCTTGCAAGAAATTCACAGCTATAGAATAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641790.1 |
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| CDS CCA 90 bp | CTTGCAGTTCTCTCTAGTTTGTCAGTTAAGCAAGATGGCTGCTCTTaGAATGGAAGAACTACTCTCTTTGCTGTTGTTGGTCGCTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LAVLSSLSVKQDGCS*NGRTTLFAVVGRFL Trigger: GAGAAAGCGACCAACAACAGCAAAGAGAGTAGTTCTTCCATTCCAAGAGCAGCCATCTTGCTTAACTGACAAACTAGAGAGAACTGCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000555721.2 ENST00000641790.1 ENST00000656216.1 ENST00000663851.1 ENST00000665707.1 ENST00000666626.1 ENST00000668007.1 ENST00000669193.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
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| CDS CCA 90 bp | CAACTGATGAGGAAATCGGACTCTTCCTTAATCCCTTCCACGCCCTaGGGCTTATTCTCAGAAGTTTATCTAACTTGTGAATGTTATGGC | + |
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Preference number: 5 (lower is better) Translates to: QLMRKSDSSLIPSTP*GLFSEVYLTCECYG Trigger: GCCATAACATTCACAAGTTAGATAAACTTCTGAGAATAAGCCCCAGGGCGTGGAAGGGATTAAGGAAGAGTCCGATTTCCTCATCAGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664807.1 |
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| CDS TCA 90 bp | ATGTTTGCACACCAGGTGGGTATTTGTACCATAACAGGAGGAACTTaGAGGCAATTCAGCTGTCTTCCCAAATGTGTGACTTGGAAAGAT | + |
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Preference number: 5 (lower is better) Translates to: MFAHQVGICTITGGT*RQFSCLPKCVTWKD Trigger: ATCTTTCCAAGTCACACATTTGGGAAGACAGCTGAATTGCCTTCAAGTTCCTCCTGTTATGGTACAAATACCCACCTGGTGTGCAAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562748.2 |
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| CDS CCA 90 bp | CTCTCTTTGCTGTTGTTGGTCGCTTTCTCAAAACTACTGGAAAAATaGATCCTGAGAGAATTCCTAGGTTATGCGAGGGAGATCACTAAC | + |
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Preference number: 5 (lower is better) Translates to: LSLLLLVAFSKLLEK*ILREFLGYAREITN Trigger: GTTAGTGATCTCCCTCGCATAACCTAGGAATTCTCTCAGGATCCATTTTTCCAGTAGTTTTGAGAAAGCGACCAACAACAGCAAAGAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 11 transcripts: ENST00000555721.2 ENST00000641790.1 ENST00000656216.1 ENST00000663851.1 ENST00000665707.1 ENST00000666626.1 ENST00000668007.1 ENST00000669193.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
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| CDS TCA 90 bp | AGCCTCCACACACATTTCAAAGAGAGACGTTTGTTCCCTCTGGCATaGGGAACAATTACCCAATTATCTATGCAGAATGATAGGTGTTTA | + |
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Preference number: 5 (lower is better) Translates to: SLHTHFKERRLFPLA*GTITQLSMQNDRCL Trigger: TAAACACCTATCATTCTGCATAGATAATTGGGTAATTGTTCCTCATGCCAGAGGGAACAAACGTCTCTCTTTGAAATGTGTGTGGAGGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554640.5 |
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| CDS TCA 90 bp | GAGAAGCAAGGTTCTCTATCATCAATGAAGACGTTCAAGTTTACCTaGGGAAACAAGGGTTCCCTTTGGAAGTTAGATCATTTTGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: EKQGSLSSMKTFKFT*GNKGSLWKLDHFGS Trigger: TGAGCCAAAATGATCTAACTTCCAAAGGGAACCCTTGTTTCCTCAGGTAAACTTGAACGTCTTCATTGATGATAGAGAACCTTGCTTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554640.5 |
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| CDS CCA 90 bp | GTTTACCTGAGGAAACAAGGGTTCCCTTTGGAAGTTAGATCATTTTaGCTCAATTCAAGCTTTGTTTACAGATCCTTAACTCAGCGGATG | + |
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Preference number: 5 (lower is better) Translates to: VYLRKQGFPLEVRSF*LNSSFVYRSLTQRM Trigger: CATCCGCTGAGTTAAGGATCTGTAAACAAAGCTTGAATTGAGCCAAAATGATCTAACTTCCAAAGGGAACCCTTGTTTCCTCAGGTAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554640.5 |
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| CDS TCA 90 bp | GATTCATTATGTAATTTGAGTCATAGACAACCAGTTGATAGTCAATaGGTGTGCAAAAACGTTGCTACTGAGTGGAAGCGTGAAGACGAC | + |
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Preference number: 5 (lower is better) Translates to: DSLCNLSHRQPVDSQ*VCKNVATEWKREDD Trigger: GTCGTCTTCACGCTTCCACTCAGTAGCAACGTTTTTGCACACTCATTGACTATCAACTGGTTGTCTATGACTCAAATTACATAATGAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 16 transcripts: ENST00000555721.2 ENST00000562661.1 ENST00000655534.1 ENST00000656216.1 ENST00000662417.1 ENST00000663851.1 ENST00000665707.1 ENST00000666218.1 ENST00000666626.1 ENST00000667695.1 ENST00000668007.1 ENST00000669634.1 ENST00000669648.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
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| CDS TCA 90 bp | CAGCCCACTGTTCCACATCTTGAGATCAACCTCAATGATGTTATCTaGTCACCTCCAAAAACACATTGTTGTTTTCTTTCCCGAAACATA | + |
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Preference number: 5 (lower is better) Translates to: QPTVPHLEINLNDVI*SPPKTHCCFLSRNI Trigger: TATGTTTCGGGAAAGAAAACAACAATGTGTTTTTGGAGGTGATCAGATAACATCATTGAGGTTGATCTCAAGATGTGGAACAGTGGGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669193.1 |
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| CDS TCA 90 bp | CTCCGTGAGTTCAATTGTTGTTCATTTTTAGCTCCCACAAGTAGGTaGGAACATGTGAAGTTTGTCTTTCTGTTCCTGGCTATTTCACTT | + |
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Preference number: 5 (lower is better) Translates to: LREFNCCSFLAPTSR*EHVKFVFLFLAISL Trigger: AAGTGAAATAGCCAGGAACAGAAAGACAAACTTCACATGTTCTCACCTACTTGTGGGAGCTAAAAATGAACAACAATTGAACTCACGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669648.1 |
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| CDS CCA 72 bp | CTCACGTCCCCATCACGCGGACTCATTTGCAACCTGTaGGAAGTTGCCGCTCTCTCTGGCATGGTGGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LTSPSRGLICNL*EVAALSGMVAL Trigger: CAGCGCCACCATGCCAGAGAGAGCGGCAACTTCCCACAGGTTGCAAATGAGTCCGCGTGATGGGGACGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562748.2 |
||
| CDS CCA 72 bp | GCCGCAGACCCAGGCGATTGGCTGAGAGCGCCTTGCTaGTCCGATGTGCTCTCCAGGTGGGTTAAGTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: AADPGDWLRAPC*SDVLSRWVKCI Trigger: AATGCACTTAACCCACCTGGAGAGCACATCGGACCAGCAAGGCGCTCTCAGCCAATCGCCTGGGTCTGCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000562748.2 ENST00000641790.1 |
||
| CDS CCA 72 bp | AGGATGCTCAGAGCCGGCCAGCCAAGGGGACAGGGCTaGGCTTTGTGCCTCCATTTTAAGGCAGGCATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RMLRAGQPRGQG*ALCLHFKAGIC Trigger: ACAGATGCCTGCCTTAAAATGGAGGCACAAAGCCCAGCCCTGTCCCCTTGGCTGGCCGGCTCTGAGCATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000554640.5 ENST00000666218.1 |
||
| CDS GCA 72 bp | AGCACGTCCCCTGTCGCTGCGTGTCCATCCAAATGCTaGACAAGGCCCAAGGAGATTTCCAGGGAACAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: STSPVAACPSKC*TRPKEISREQR Trigger: TCTCTGTTCCCTGGAAATCTCCTTGGGCCTTGTGCAGCATTTGGATGGACACGCAGCGACAGGGGACGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554640.5 ENST00000666218.1 |
||
| CDS GCA 72 bp | CCCATCACGCGGACTCATTTGCAACCTGTGGGAAGTTaGCGCTCTCTCTGGCATGGTGGCGCTGAAGGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: PITRTHLQPVGS*RSLWHGGAEGN Trigger: ATTTCCTTCAGCGCCACCATGCCAGAGAGAGCGGCAACTTCCCACAGGTTGCAAATGAGTCCGCGTGATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562748.2 |
||
| CDS CCA 72 bp | CAGGTAGAGAAGCCAAACACCAGCAGGCCTGGTGGCTaGGAAAGACAGTGTGCCCTCTGCGGAAGAACACAA | + |
|
Preference number: 6 (lower is better) Translates to: QVEKPNTSRPGG*ERQCALCGRTQ Trigger: TTGTGTTCTTCCGCAGAGGGCACACTGTCTTTCCCAGCCACCAGGCCTGCTGGTGTTTGGCTTCTCTACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554640.5 |
||
| CDS CAA 72 bp | CTCAGAGCCGGCCAGCCAAGGGGACAGGGCTGGGCTTaGTGCCTCCATTTTAAGGCAGGCATCTGTTATCTA | + |
|
Preference number: 6 (lower is better) Translates to: LRAGQPRGQGWA*CLHFKAGICYL Trigger: TAGATAACAGATGCCTGCCTTAAAATGGAGGCACAAAGCCCAGCCCTGTCCCCTTGGCTGGCCGGCTCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000554640.5 ENST00000666218.1 |
||
| CDS CAA 90 bp | CTCAGGATGCTCAGAGCCGGCCAGCCAAGGGGACAGGGCTGGGCTTaGTGCCTCCATTTTAAGGCAGGCATCTGTTATCTAGAATTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LRMLRAGQPRGQGWA*CLHFKAGICYLEFS Trigger: GCTGAATTCTAGATAACAGATGCCTGCCTTAAAATGGAGGCACAAAGCCCAGCCCTGTCCCCTTGGCTGGCCGGCTCTGAGCATCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000554640.5 ENST00000666218.1 |
||
| CDS TCA 72 bp | GGAAAAGCAATTTCACAAGCCCTGCCTGCGTACAGATaGGCGGGACCACAAACCAGCTCAGAATGGCCACCG | + |
|
Preference number: 6 (lower is better) Translates to: GKAISQALPAYR*AGPQTSSEWPP Trigger: CGGTGGCCATTCTGAGCTGGTTTGTGGTCCCGCTCATCTGTACGCAGGCAGGGCTTGTGAAATTGCTTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554640.5 |
||
| CDS GCA 72 bp | AGAGCCGGCCAGCCAAGGGGACAGGGCTGGGCTTTGTaGCTCCATTTTAAGGCAGGCATCTGTTATCTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RAGQPRGQGWAL*LHFKAGICYLE Trigger: TTCTAGATAACAGATGCCTGCCTTAAAATGGAGGCACAAAGCCCAGCCCTGTCCCCTTGGCTGGCCGGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000554640.5 ENST00000666218.1 |
||
| CDS CAA 72 bp | CTGACCCCCGTGGAGACCGAGCTGTGGACTCTTTGTTaGCCACAGATCTACTTGCCTGAGGGAATGGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LTPVETELWTLC*PQIYLPEGMVQ Trigger: CTGAACCATTCCCTCAGGCAAGTAGATCTGTGGCAAACAAAGAGTCCACAGCTCGGTCTCCACGGGGGTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554640.5 |
||
| CDS TCA 72 bp | AACATAGTGAAACGCTGTCCTTCTCATCCTTTCCCGTaGCAGGGGGACTCCCTATTCCAGGTGATCGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: NIVKRCPSHPFP*QGDSLFQVIGP Trigger: TGGCCCGATCACCTGGAATAGGGAGTCCCCCTGTCACGGGAAAGGATGAGAAGGACAGCGTTTCACTATGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000662417.1 ENST00000664807.1 |
||
| CDS GCA 72 bp | GTCAGTTGCCACCTGTTCGGAAAAGGAACCACCAAATaGAGAGCGGCAGCTTGTTACCCACCTCTCAAACCC | + |
|
Preference number: 6 (lower is better) Translates to: VSCHLFGKGTTK*RAAACYPPLKP Trigger: GGGTTTGAGAGGTGGGTAACAAGCTGCCGCTCTGCATTTGGTGGTTCCTTTTCCGAACAGGTGGCAACTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562748.2 |
||
| CDS GCA 72 bp | TCCCTCTTACTTCCTGCCTACCGCAGGCACAGGCAGTaGAGCAGCCTCAGAAGGTCAAAGCTCTCAATGAAT | + |
|
Preference number: 6 (lower is better) Translates to: SLLLPAYRRHRQ*SSLRRSKLSMN Trigger: ATTCATTGAGAGCTTTGACCTTCTGAGGCTGCTGCACTGCCTGTGCCTGCGGTAGGCAGGAAGTAAGAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669193.1 |
||
| CDS CCA 72 bp | CCTGGACAACATAGTGAAACGCTGCCACAAATCCACTaGGTGCTGCTCTCAGCGTTCGCGAACCTGAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: PGQHSETLPQIH*VLLSAFANLNF Trigger: GAAGTTCAGGTTCGCGAACGCTGAGAGCAGCACCCAGTGGATTTGTGGCAGCGTTTCACTATGTTGTCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555721.2 |
||
| CDS CCA 72 bp | AAGGAAGTCAGACTGACCCCCGTGGAGACCGAGCTGTaGACTCTTTGTTTGCCACAGATCTACTTGCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: KEVRLTPVETEL*TLCLPQIYLPE Trigger: CTCAGGCAAGTAGATCTGTGGCAAACAAAGAGTCCACAGCTCGGTCTCCACGGGGGTCAGTCTGACTTCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554640.5 |
||
| CDS CCA 72 bp | TCTCATCTTTTCTTCCAGCCCTTTTGGTCCCTACCCTaGCTCCCGGCTCTCTTGAGGAACTCTCTCTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SHLFFQPFWSLP*LPALLRNSLSL Trigger: GAGAGAGAGAGAGTTCCTCAAGAGAGCCGGGAGCCAGGGTAGGGACCAAAAGGGCTGGAAGAAAAGATGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557393.1 |
||
| CDS CCA 72 bp | CAACATAGTGAAACGCTGTCCCTGCCACAAATCCACTaGGTGCTGCTCTCAGCGTTCGCGAACCTGAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: QHSETLSLPQIH*VLLSAFANLNF Trigger: GAAGTTCAGGTTCGCGAACGCTGAGAGCAGCACCCAGTGGATTTGTGGCAGGGACAGCGTTTCACTATGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665707.1 |
||
| CDS CAA 72 bp | GGCTTGAGACCTCACGACCTTGTCAGGGACTCTGGCTaGTCCGAGTTGATTTCTTCTGCCCAAGTTCACCCT | + |
|
Preference number: 6 (lower is better) Translates to: GLRPHDLVRDSG*SELISSAQVHP Trigger: AGGGTGAACTTGGGCAGAAGAAATCAACTCGGACAAGCCAGAGTCCCTGACAAGGTCGTGAGGTCTCAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000655534.1 ENST00000656216.1 ENST00000666626.1 ENST00000669634.1 ENST00000669648.1 ENST00000670919.1 |
||
| CDS CAA 90 bp | GAAGTCAGACTGACCCCCGTGGAGACCGAGCTGTGGACTCTTTGTTaGCCACAGATCTACTTGCCTGAGGGAATGGTTCAGCTCTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: EVRLTPVETELWTLC*PQIYLPEGMVQLFL Trigger: AAGGAAGAGCTGAACCATTCCCTCAGGCAAGTAGATCTGTGGCAAACAAAGAGTCCACAGCTCGGTCTCCACGGGGGTCAGTCTGACTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554640.5 |
||
| CDS CAA 90 bp | CTTTTCTTCCAGCCCTTTTGGTCCCTACCCTGGCTCCCGGCTCTCTaGAGGAACTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LFFQPFWSLPWLPAL*RNSLSLSLSLSLCL Trigger: GAGACAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGTTCCTCAAGAGAGCCGGGAGCCAGGGTAGGGACCAAAAGGGCTGGAAGAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557393.1 |
||
| CDS TCA 72 bp | CTCACGACCTTGTCAGGGACTCTGGCTTGTCCGAGTTaGTTTCTTCTGCCCAAGTTCACCCTCTCTAGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: LTTLSGTLACPS*FLLPKFTLSSR Trigger: TCGACTAGAGAGGGTGAACTTGGGCAGAAGAAATCAACTCGGACAAGCCAGAGTCCCTGACAAGGTCGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000655534.1 ENST00000656216.1 ENST00000666626.1 ENST00000669634.1 ENST00000669648.1 ENST00000670919.1 |
||
| CDS GCA 72 bp | CATCTGTTATCTAGAATTCAGCACGTCCCCTGTCGCTaGGTGTCCATCCAAATGCTGCACAAGGCCCAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HLLSRIQHVPCR*VSIQMLHKAQG Trigger: TCCTTGGGCCTTGTGCAGCATTTGGATGGACACGCAGCGACAGGGGACGTGCTGAATTCTAGATAACAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554640.5 ENST00000666218.1 |
||
| CDS GCA 72 bp | GAAACAAAACCTCTAAGACGCCGTGGCCATAGTCTGTaGGGGCCAGCTTTCTGTCGTCGTGATGTAAAGACG | + |
|
Preference number: 6 (lower is better) Translates to: ETKPLRRRGHSL*GPAFCRRDVKT Trigger: CGTCTTTACATCACGACGACAGAAAGCTGGCCCGCACAGACTATGGCCACGGCGTCTTAGAGGTTTTGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561875.1 |
||
| CDS CAA 90 bp | AAACACAGATGTCCTTCTCCACTTCAGAGAAAGCCCGTCAGTCAGTaGCCACCTGTTCGGAAAAGGAACCACCAAATGCAGAGCGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KHRCPSPLQRKPVSQ*PPVRKRNHQMQSGS Trigger: GCTGCCGCTCTGCATTTGGTGGTTCCTTTTCCGAACAGGTGGCAACTGACTGACGGGCTTTCTCTGAAGTGGAGAAGGACATCTGTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562748.2 |
||
| CDS TCA 72 bp | GTTGAAGTGGTCTTGCTCCAGGTTCTGGGTAAAGCCTaGGACCCTAAAGTGCAGAGTGGACCACGGTACATT | + |
|
Preference number: 6 (lower is better) Translates to: VEVVLLQVLGKA*DPKVQSGPRYI Trigger: AATGTACCGTGGTCCACTCTGCACTTTAGGGTCTCAGGCTTTACCCAGAACCTGGAGCAAGACCACTTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557393.1 ENST00000641790.1 |
||
| CDS TCA 72 bp | CCCAACCAAGCACTCCAGCAGCCAATCTCCACGGAATaGCAGGAAACGTGGGAAGATCCTGATAGCTTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: PNQALQQPISTE*QETWEDPDSFH Trigger: ATGAAAGCTATCAGGATCTTCCCACGTTTCCTGTCATTCCGTGGAGATTGGCTGCTGGAGTGCTTGGTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641790.1 |
||
| CDS GCA 72 bp | TGCTCCAGGTTCTGGGTAAAGCCTGAGACCCTAAAGTaGAGAGTGGACCACGGTACATTGAACGATGGATTC | + |
|
Preference number: 6 (lower is better) Translates to: CSRFWVKPETLK*RVDHGTLNDGF Trigger: GAATCCATCGTTCAATGTACCGTGGTCCACTCTGCACTTTAGGGTCTCAGGCTTTACCCAGAACCTGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557393.1 ENST00000641790.1 |
||
| CDS GCA 72 bp | CCTTGCTGGTCCGATGTGCTCTCCAGGTGGGTTAAGTaGATTGCTTTGTCTTTATCTGGTCCAGTTCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PCWSDVLSRWVK*IALSLSGPVPL Trigger: CAAGGGAACTGGACCAGATAAAGACAAAGCAATGCACTTAACCCACCTGGAGAGCACATCGGACCAGCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000562748.2 ENST00000641790.1 |
||
| CDS CCA 72 bp | CATTGGCTTGAGACCTCACGACCTTGTCAGGGACTCTaGCTTGTCCGAGTTGATTTCTTCTGCCCAAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: HWLETSRPCQGL*LVRVDFFCPSS Trigger: TGAACTTGGGCAGAAGAAATCAACTCGGACAAGCCAGAGTCCCTGACAAGGTCGTGAGGTCTCAAGCCAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000655534.1 ENST00000656216.1 ENST00000666626.1 ENST00000669634.1 ENST00000669648.1 ENST00000670919.1 |
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| CDS CAA 72 bp | ACAAAGATGACCAAGAGCCACCAACCCGGAAAAGCCTaGCCCCTAACCAGGGACACAGGCAAATGTCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: TKMTKSHQPGKA*PLTRDTGKCLF Trigger: AAACAGACATTTGCCTGTGTCCCTGGTTAGGGGCAAGGCTTTTCCGGGTTGGTGGCTCTTGGTCATCTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554640.5 |
||
| CDS CAA 72 bp | TGTCCTTCTCCACTTCAGAGAAAGCCCGTCAGTCAGTaGCCACCTGTTCGGAAAAGGAACCACCAAATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: CPSPLQRKPVSQ*PPVRKRNHQMQ Trigger: CTGCATTTGGTGGTTCCTTTTCCGAACAGGTGGCAACTGACTGACGGGCTTTCTCTGAAGTGGAGAAGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562748.2 |
||
| CDS CAA 72 bp | GTGAAACGCTGTCCCTTTTTATGTCATCCCATTGGCTaGAGACCTCACGACCTTGTCAGGGACTCTGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VKRCPFLCHPIG*RPHDLVRDSGL Trigger: CAAGCCAGAGTCCCTGACAAGGTCGTGAGGTCTCAAGCCAATGGGATGACATAAAAAGGGACAGCGTTTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655534.1 ENST00000670919.1 |
||
| CDS GCA 72 bp | AGCGTGGAAGCAGCACTCACACAGTCTCATACAATATaGTGTGAGAGAGAATGGACTGTGCCAGGGATGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SVEAALTQSHTI*CEREWTVPGMY Trigger: GTACATCCCTGGCACAGTCCATTCTCTCTCACAGCATATTGTATGAGACTGTGTGAGTGCTGCTTCCACGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 17 transcripts: ENST00000554640.5 ENST00000555721.2 ENST00000561875.1 ENST00000562661.1 ENST00000641790.1 ENST00000655534.1 ENST00000656216.1 ENST00000663851.1 ENST00000665707.1 ENST00000666626.1 ENST00000668007.1 ENST00000669193.1 ENST00000669634.1 ENST00000669648.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
||
| CDS CCA 72 bp | TTCTTGCAAGAGTTGAAGTGGTCTTGCTCCAGGTTCTaGGTAAAGCCTGAGACCCTAAAGTGCAGAGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: FLQELKWSCSRF*VKPETLKCRVD Trigger: GTCCACTCTGCACTTTAGGGTCTCAGGCTTTACCCAGAACCTGGAGCAAGACCACTTCAACTCTTGCAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557393.1 ENST00000641790.1 |
||
| CDS CAA 90 bp | AGACAGTGTGCCCTCTGCGGAAGAACACAAGGTAATAAGTGGCTTTaGCAGCAATTAAACACAAGAGCAAAGGTGAACCGCCAGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RQCALCGRTQGNKWL*QQLNTRAKVNRQLL Trigger: GAGGAGCTGGCGGTTCACCTTTGCTCTTGTGTTTAATTGCTGCAAAAGCCACTTATTACCTTGTGTTCTTCCGCAGAGGGCACACTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554640.5 |
||
| CDS TCA 72 bp | GTGCAGCAGCCTCAGAAGGTCAAAGCTCTCAATGAATaGGACTCCAGAAGTTGGAAGTTGGGTTTCTGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: VQQPQKVKALNE*DSRSWKLGFCD Trigger: GTCACAGAAACCCAACTTCCAACTTCTGGAGTCTCATTCATTGAGAGCTTTGACCTTCTGAGGCTGCTGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669193.1 |
||
| CDS CCA 72 bp | GATCGAGACTCTGTGAATTTCTTGCAAGAGTTGAAGTaGTCTTGCTCCAGGTTCTGGGTAAAGCCTGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: DRDSVNFLQELK*SCSRFWVKPET Trigger: GGTCTCAGGCTTTACCCAGAACCTGGAGCAAGACCACTTCAACTCTTGCAAGAAATTCACAGAGTCTCGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557393.1 |
||
| CDS CCA 72 bp | TATCATTTAATGCAGAAATGCCTGCCACAAATCCACTaGGTGCTGCTCTCAGCGTTCGCGAACCTGAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: YHLMQKCLPQIH*VLLSAFANLNF Trigger: GAAGTTCAGGTTCGCGAACGCTGAGAGCAGCACCCAGTGGATTTGTGGCAGGCATTTCTGCATTAAATGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656216.1 ENST00000670919.1 |
||
| CDS CAA 72 bp | TCCGATGTGCTCTCCAGGTGGGTTAAGTGCATTGCTTaGTCTTTATCTGGTCCAGTTCCCTTGTGTCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: SDVLSRWVKCIA*SLSGPVPLCHL Trigger: GAGATGACACAAGGGAACTGGACCAGATAAAGACAAAGCAATGCACTTAACCCACCTGGAGAGCACATCGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000562748.2 ENST00000641790.1 |
||
| CDS CAA 90 bp | TTAAGGACAACAAAGATGACCAAGAGCCACCAACCCGGAAAAGCCTaGCCCCTAACCAGGGACACAGGCAAATGTCTGTTTGTTTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LRTTKMTKSHQPGKA*PLTRDTGKCLFVCL Trigger: CAAACAAACAAACAGACATTTGCCTGTGTCCCTGGTTAGGGGCAAGGCTTTTCCGGGTTGGTGGCTCTTGGTCATCTTTGTTGTCCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554640.5 |
||
| CDS CAA 90 bp | TATGCTGTGAGAGAGAATGGACTGTGCCAGGGATGTACTGAGTCCTaGCAGTTCTCTCTAGTTTGTCAGTTAAGCAAGATGGCTGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: YAVRENGLCQGCTES*QFSLVCQLSKMAAL Trigger: AAGAGCAGCCATCTTGCTTAACTGACAAACTAGAGAGAACTGCAAGGACTCAGTACATCCCTGGCACAGTCCATTCTCTCTCACAGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000555721.2 ENST00000641790.1 ENST00000655534.1 ENST00000656216.1 ENST00000663851.1 ENST00000665707.1 ENST00000666626.1 ENST00000668007.1 ENST00000669193.1 ENST00000669634.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
||
| CDS CAA 90 bp | CCTTGCTGGTCCGATGTGCTCTCCAGGTGGGTTAAGTGCATTGCTTaGTCTTTATCTGGTCCAGTTCCCTTGTGTCATCTCTCTTTATTT | + |
|
Preference number: 6 (lower is better) Translates to: PCWSDVLSRWVKCIA*SLSGPVPLCHLSLF Trigger: AAATAAAGAGAGATGACACAAGGGAACTGGACCAGATAAAGACAAAGCAATGCACTTAACCCACCTGGAGAGCACATCGGACCAGCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000562748.2 ENST00000641790.1 |
||
| CDS CAA 90 bp | AAGGGAGCTGGTGTATTTTATTTACACACTAACCCTGCTGTGCATTaGGACACCTGCTCCCAGGTGTTAATTCCCTCTTACTTCCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: KGAGVFYLHTNPAVH*DTCSQVLIPSYFLP Trigger: AGGCAGGAAGTAAGAGGGAATTAACACCTGGGAGCAGGTGTCCAAATGCACAGCAGGGTTAGTGTGTAAATAAAATACACCAGCTCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669193.1 |
||
| CDS TCA 72 bp | TGCTGTGAGAGAGAATGGACTGTGCCAGGGATGTACTaGGTCCTTGCAGTTCTCTCTAGTTTGTCAGTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: CCEREWTVPGMY*VLAVLSSLSVK Trigger: CTTAACTGACAAACTAGAGAGAACTGCAAGGACTCAGTACATCCCTGGCACAGTCCATTCTCTCTCACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000555721.2 ENST00000641790.1 ENST00000655534.1 ENST00000656216.1 ENST00000663851.1 ENST00000665707.1 ENST00000666626.1 ENST00000668007.1 ENST00000669193.1 ENST00000669634.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
||
| CDS GCA 72 bp | TATTTACACACTAACCCTGCTGTGCATTTGGACACCTaGTCCCAGGTGTTAATTCCCTCTTACTTCCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: YLHTNPAVHLDT*SQVLIPSYFLP Trigger: AGGCAGGAAGTAAGAGGGAATTAACACCTGGGAGCAGGTGTCCAAATGCACAGCAGGGTTAGTGTGTAAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669193.1 |
||
| CDS CCA 72 bp | AGAAGCTTGTCAGTTGCTCAAATAATGCAGGGACCATaGGTTTTTAGTGTAGCGTGGAAGCAGCACTCACAC | + |
|
Preference number: 6 (lower is better) Translates to: RSLSVAQIMQGP*VFSVAWKQHSH Trigger: GTGTGAGTGCTGCTTCCACGCTACACTAAAAACCCATGGTCCCTGCATTATTTGAGCAACTGACAAGCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 17 transcripts: ENST00000554640.5 ENST00000555721.2 ENST00000561875.1 ENST00000562661.1 ENST00000641790.1 ENST00000655534.1 ENST00000656216.1 ENST00000663851.1 ENST00000665707.1 ENST00000666626.1 ENST00000668007.1 ENST00000669193.1 ENST00000669634.1 ENST00000669648.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
||
| CDS CCA 72 bp | CTCTTTGTTTGCCACAGATCTACTTGCCTGAGGGAATaGTTCAGCTCTTCCTTCCTTTTCATTCCCGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LFVCHRSTCLRE*FSSSFLFIPVL Trigger: CAAGACGGGAATGAAAAGGAAGGAAGAGCTGAACCATTCCCTCAGGCAAGTAGATCTGTGGCAAACAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554640.5 |
||
| CDS CCA 72 bp | GGTAATTTAGACAAACTGAGGCGACACCAGCCAGCTTaGTTCATCAAAAATCTGCCACAAATCCACTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GNLDKLRRHQPA*FIKNLPQIHWV Trigger: CACCCAGTGGATTTGTGGCAGATTTTTGATGAACCAAGCTGGCTGGTGTCGCCTCAGTTTGTCTAAATTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000562661.1 ENST00000641790.1 ENST00000669193.1 ENST00000671224.1 |
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| CDS CAA 72 bp | GCCCTCTGCGGAAGAACACAAGGTAATAAGTGGCTTTaGCAGCAATTAAACACAAGAGCAAAGGTGAACCGC | + |
|
Preference number: 6 (lower is better) Translates to: ALCGRTQGNKWL*QQLNTRAKVNR Trigger: GCGGTTCACCTTTGCTCTTGTGTTTAATTGCTGCAAAAGCCACTTATTACCTTGTGTTCTTCCGCAGAGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554640.5 |
||
| CDS CAA 90 bp | AGGAGGAACTTGAAGGCAATTCAGCTGTCTTCCCAAATGTGTGACTaGGAAAGATCCGGTGTTCCGCAATATGGAAAACACAGATGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RRNLKAIQLSSQMCD*ERSGVPQYGKHRCP Trigger: AGGACATCTGTGTTTTCCATATTGCGGAACACCGGATCTTTCCAAGTCACACATTTGGGAAGACAGCTGAATTGCCTTCAAGTTCCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562748.2 |
||
| CDS TCA 72 bp | CAGACCTGCCACCTTGTTCATGCGGAAACTTGCTTATaGGAATGGGAAGTAAGGAAGGCAGGAACTTATATC | + |
|
Preference number: 6 (lower is better) Translates to: QTCHLVHAETCL*EWEVRKAGTYI Trigger: GATATAAGTTCCTGCCTTCCTTACTTCCCATTCTCATAAGCAAGTTTCCGCATGAACAAGGTGGCAGGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554640.5 |
||
| CDS TCA 72 bp | TGTCCCTGCCACCTTGTTCATGCGGAAACTTGCTTATaGGAATGGGAAGTAAGGAAGGCAGGAACTTATATC | + |
|
Preference number: 6 (lower is better) Translates to: CPCHLVHAETCL*EWEVRKAGTYI Trigger: GATATAAGTTCCTGCCTTCCTTACTTCCCATTCTCATAAGCAAGTTTCCGCATGAACAAGGTGGCAGGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668007.1 |
||
| CDS GCA 72 bp | AGTCTCATACAATATGCTGTGAGAGAGAATGGACTGTaGCAGGGATGTACTGAGTCCTTGCAGTTCTCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: SLIQYAVRENGL*QGCTESLQFSL Trigger: TAGAGAGAACTGCAAGGACTCAGTACATCCCTGGCACAGTCCATTCTCTCTCACAGCATATTGTATGAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000554640.5 ENST00000555721.2 ENST00000562661.1 ENST00000641790.1 ENST00000655534.1 ENST00000656216.1 ENST00000663851.1 ENST00000665707.1 ENST00000666626.1 ENST00000668007.1 ENST00000669193.1 ENST00000669634.1 ENST00000669648.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
||
| CDS CCA 72 bp | ATGGGAAGTAAGGAAGGCAGGAACTTATATCTTCTCTaGTTAGCTGTGTGGCTTCAGGGCAATCACTTAACC | + |
|
Preference number: 6 (lower is better) Translates to: MGSKEGRNLYLL*LAVWLQGNHLT Trigger: GGTTAAGTGATTGCCCTGAAGCCACACAGCTAACCAGAGAAGATATAAGTTCCTGCCTTCCTTACTTCCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000554640.5 ENST00000668007.1 |
||
| CDS CCA 72 bp | CAGTGTGCCCTCTGCGGAAGAACACAAGGTAATAAGTaGCTTTTGCAGCAATTAAACACAAGAGCAAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QCALCGRTQGNK*LLQQLNTRAKV Trigger: CACCTTTGCTCTTGTGTTTAATTGCTGCAAAAGCCACTTATTACCTTGTGTTCTTCCGCAGAGGGCACACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554640.5 |
||
| CDS CAA 72 bp | AGAGAGAATGGACTGTGCCAGGGATGTACTGAGTCCTaGCAGTTCTCTCTAGTTTGTCAGTTAAGCAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: RENGLCQGCTES*QFSLVCQLSKM Trigger: CATCTTGCTTAACTGACAAACTAGAGAGAACTGCAAGGACTCAGTACATCCCTGGCACAGTCCATTCTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000555721.2 ENST00000641790.1 ENST00000655534.1 ENST00000656216.1 ENST00000663851.1 ENST00000665707.1 ENST00000666626.1 ENST00000668007.1 ENST00000669193.1 ENST00000669634.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
||
| CDS CAA 72 bp | GACAACCAGTTGATAGTCAATGAGTGTGCAAAAACGTaGCTACTGAGTGGAAGCGTGAAGACGACTGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: DNQLIVNECAKT*LLSGSVKTTEE Trigger: CTCTTCAGTCGTCTTCACGCTTCCACTCAGTAGCAACGTTTTTGCACACTCATTGACTATCAACTGGTTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 16 transcripts: ENST00000555721.2 ENST00000562661.1 ENST00000655534.1 ENST00000656216.1 ENST00000662417.1 ENST00000663851.1 ENST00000665707.1 ENST00000666218.1 ENST00000666626.1 ENST00000667695.1 ENST00000668007.1 ENST00000669634.1 ENST00000669648.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
||
| CDS CAA 72 bp | CCTGAGACCCTAAAGTGCAGAGTGGACCACGGTACATaGAACGATGGATTCTTTCTTAGCAACATTTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PETLKCRVDHGT*NDGFFLSNICR Trigger: TCTGCAAATGTTGCTAAGAAAGAATCCATCGTTCAATGTACCGTGGTCCACTCTGCACTTTAGGGTCTCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557393.1 ENST00000641790.1 |
||
| CDS CAA 90 bp | CATGTTTGCACACCAGGTGGGTATTTGTACCATAACAGGAGGAACTaGAAGGCAATTCAGCTGTCTTCCCAAATGTGTGACTTGGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: HVCTPGGYLYHNRRN*KAIQLSSQMCDLER Trigger: TCTTTCCAAGTCACACATTTGGGAAGACAGCTGAATTGCCTTCAAGTTCCTCCTGTTATGGTACAAATACCCACCTGGTGTGCAAACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562748.2 |
||
| CDS CAA 90 bp | CAACATAGTGAAACGCTGTCCCTGCCACCTTGTTCATGCGGAAACTaGCTTATGAGAATGGGAAGTAAGGAAGGCAGGAACTTATATCTT | + |
|
Preference number: 6 (lower is better) Translates to: QHSETLSLPPCSCGN*LMRMGSKEGRNLYL Trigger: AAGATATAAGTTCCTGCCTTCCTTACTTCCCATTCTCATAAGCAAGTTTCCGCATGAACAAGGTGGCAGGGACAGCGTTTCACTATGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668007.1 |
||
| CDS TCA 72 bp | TTATTTACAAAGCAGGCAGTGGCTGGATTTAGTTTATaGGTGATAGTGTGCCACTGCCTGCTTTGGAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: LFTKQAVAGFSL*VIVCHCLLWRM Trigger: CATCCTCCAAAGCAGGCAGTGGCACACTATCACTCATAAACTAAATCCAGCCACTGCCTGCTTTGTAAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561875.1 |
||
| CDS GCA 72 bp | CTTAGGTCACTTCCAAATCTTGGCTGTTGTGAACAGTaGTTTTTATGTCATCCCATTGGCTTGAGACCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LRSLPNLGCCEQ*FLCHPIGLRPH Trigger: GTGAGGTCTCAAGCCAATGGGATGACATAAAAAGCACTGTTCACAACAGCCAAGATTTGGAAGTGACCTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669648.1 |
||
| CDS CCA 72 bp | CTGTTGTTGGTCGCTTTCTCAAAACTACTGGAAAAATaGATCCTGAGAGAATTCCTAGGTTATGCGAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLLVAFSKLLEK*ILREFLGYARE Trigger: CTCCCTCGCATAACCTAGGAATTCTCTCAGGATCCATTTTTCCAGTAGTTTTGAGAAAGCGACCAACAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 11 transcripts: ENST00000555721.2 ENST00000641790.1 ENST00000656216.1 ENST00000663851.1 ENST00000665707.1 ENST00000666626.1 ENST00000668007.1 ENST00000669193.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
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| CDS CCA 72 bp | CAAATAATGCAGGGACCATGGGTTTTTAGTGTAGCGTaGAAGCAGCACTCACACAGTCTCATACAATATGCT | + |
|
Preference number: 6 (lower is better) Translates to: QIMQGPWVFSVA*KQHSHSLIQYA Trigger: AGCATATTGTATGAGACTGTGTGAGTGCTGCTTCCACGCTACACTAAAAACCCATGGTCCCTGCATTATTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 17 transcripts: ENST00000554640.5 ENST00000555721.2 ENST00000561875.1 ENST00000562661.1 ENST00000641790.1 ENST00000655534.1 ENST00000656216.1 ENST00000663851.1 ENST00000665707.1 ENST00000666626.1 ENST00000668007.1 ENST00000669193.1 ENST00000669634.1 ENST00000669648.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
||
| CDS CCA 72 bp | TATTCTATAGCTGTGAATTTCTTGCAAGAGTTGAAGTaGTCTTGCTCCAGGTTCTGGGTAAAGCCTGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: YSIAVNFLQELK*SCSRFWVKPET Trigger: GGTCTCAGGCTTTACCCAGAACCTGGAGCAAGACCACTTCAACTCTTGCAAGAAATTCACAGCTATAGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641790.1 |
||
| CDS CCA 72 bp | AGGAAATCGGACTCTTCCTTAATCCCTTCCACGCCCTaGGGCTTATTCTCAGAAGTTTATCTAACTTGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: RKSDSSLIPSTP*GLFSEVYLTCE Trigger: TTCACAAGTTAGATAAACTTCTGAGAATAAGCCCCAGGGCGTGGAAGGGATTAAGGAAGAGTCCGATTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664807.1 |
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| CDS CCA 72 bp | GTGGGCAACAGGAACTTCATTTCAAGACAGAACTCATaGAAGAGTGTAGAACTCACACCTCACAGTTATTCC | + |
|
Preference number: 6 (lower is better) Translates to: VGNRNFISRQNS*KSVELTPHSYS Trigger: GGAATAACTGTGAGGTGTGAGTTCTACACTCTTCCATGAGTTCTGTCTTGAAATGAAGTTCCTGTTGCCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669193.1 |
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| CDS CCA 72 bp | ATTTCACTTAATGTGATCCTTTTTATGTCATCCCATTaGCTTGAGACCTCACGACCTTGTCAGGGACTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ISLNVILFMSSH*LETSRPCQGLW Trigger: CCAGAGTCCCTGACAAGGTCGTGAGGTCTCAAGCCAATGGGATGACATAAAAAGGATCACATTAAGTGAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669634.1 |
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| CDS CAA 72 bp | TTGAAGGCAATTCAGCTGTCTTCCCAAATGTGTGACTaGGAAAGATCCGGTGTTCCGCAATATGGAAAACAC | + |
|
Preference number: 6 (lower is better) Translates to: LKAIQLSSQMCD*ERSGVPQYGKH Trigger: GTGTTTTCCATATTGCGGAACACCGGATCTTTCCAAGTCACACATTTGGGAAGACAGCTGAATTGCCTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562748.2 |
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| CDS CAA 72 bp | GGTGTATTTTATTTACACACTAACCCTGCTGTGCATTaGGACACCTGCTCCCAGGTGTTAATTCCCTCTTAC | + |
|
Preference number: 6 (lower is better) Translates to: GVFYLHTNPAVH*DTCSQVLIPSY Trigger: GTAAGAGGGAATTAACACCTGGGAGCAGGTGTCCAAATGCACAGCAGGGTTAGTGTGTAAATAAAATACACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669193.1 |
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| CDS CAA 90 bp | AGCAAGATGGCTGCTCTTGGAATGGAAGAACTACTCTCTTTGCTGTaGTTGGTCGCTTTCTCAAAACTACTGGAAAAATGGATCCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SKMAALGMEELLSLL*LVAFSKLLEKWILR Trigger: TCTCAGGATCCATTTTTCCAGTAGTTTTGAGAAAGCGACCAACAACAGCAAAGAGAGTAGTTCTTCCATTCCAAGAGCAGCCATCTTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 11 transcripts: ENST00000555721.2 ENST00000641790.1 ENST00000656216.1 ENST00000663851.1 ENST00000665707.1 ENST00000666626.1 ENST00000668007.1 ENST00000669193.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
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| CDS TCA 72 bp | TCTTCCTTCCTTTTCATTCCCGTCTTGTGGGAAATGTaGAAACATGTAACAGGGAGAGAATATCCCCGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SSFLFIPVLWEM*KHVTGREYPRK Trigger: TTTGCGGGGATATTCTCTCCCTGTTACATGTTTTCACATTTCCCACAAGACGGGAATGAAAAGGAAGGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554640.5 |
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| CDS TCA 72 bp | ACAGGACCATTGTCGTGTATGCAGCCCCTCCTTGATTaGAACGTTGTCATGTGGCACATGACTATATTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: TGPLSCMQPLLD*NVVMWHMTIFL Trigger: TAAAAATATAGTCATGTGCCACATGACAACGTTTCAATCAAGGAGGGGCTGCATACACGACAATGGTCCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562748.2 |
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| CDS GCA 72 bp | AGATGGCTGCTCTTGGAATGGAAGAACTACTCTCTTTaGTGTTGTTGGTCGCTTTCTCAAAACTACTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: RWLLLEWKNYSL*CCWSLSQNYWK Trigger: TTTCCAGTAGTTTTGAGAAAGCGACCAACAACAGCAAAGAGAGTAGTTCTTCCATTCCAAGAGCAGCCATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000555721.2 ENST00000641790.1 ENST00000656216.1 ENST00000663851.1 ENST00000665707.1 ENST00000666626.1 ENST00000668007.1 ENST00000669193.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
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| CDS GCA 72 bp | GCAGTTCTCTCTAGTTTGTCAGTTAAGCAAGATGGCTaGTCTTGGAATGGAAGAACTACTCTCTTTGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: AVLSSLSVKQDG*SWNGRTTLFAV Trigger: AACAGCAAAGAGAGTAGTTCTTCCATTCCAAGAGCAGCCATCTTGCTTAACTGACAAACTAGAGAGAACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000555721.2 ENST00000641790.1 ENST00000656216.1 ENST00000663851.1 ENST00000665707.1 ENST00000666626.1 ENST00000668007.1 ENST00000669193.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
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| CDS CCA 72 bp | CTCTCTAGTTTGTCAGTTAAGCAAGATGGCTGCTCTTaGAATGGAAGAACTACTCTCTTTGCTGTTGTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LSSLSVKQDGCS*NGRTTLFAVVG Trigger: ACCAACAACAGCAAAGAGAGTAGTTCTTCCATTCCAAGAGCAGCCATCTTGCTTAACTGACAAACTAGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000555721.2 ENST00000641790.1 ENST00000656216.1 ENST00000663851.1 ENST00000665707.1 ENST00000666626.1 ENST00000668007.1 ENST00000669193.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
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| CDS CAA 72 bp | AAGATGGCTGCTCTTGGAATGGAAGAACTACTCTCTTaGCTGTTGTTGGTCGCTTTCTCAAAACTACTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: KMAALGMEELLS*LLLVAFSKLLE Trigger: TTCCAGTAGTTTTGAGAAAGCGACCAACAACAGCAAAGAGAGTAGTTCTTCCATTCCAAGAGCAGCCATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000555721.2 ENST00000641790.1 ENST00000656216.1 ENST00000663851.1 ENST00000665707.1 ENST00000666626.1 ENST00000668007.1 ENST00000669193.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
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| CDS CAA 90 bp | AAGATGGCTGCTCTTGGAATGGAAGAACTACTCTCTTTGCTGTTGTaGGTCGCTTTCTCAAAACTACTGGAAAAATGGATCCTGAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: KMAALGMEELLSLLL*VAFSKLLEKWILRE Trigger: TTCTCTCAGGATCCATTTTTCCAGTAGTTTTGAGAAAGCGACCAACAACAGCAAAGAGAGTAGTTCTTCCATTCCAAGAGCAGCCATCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 11 transcripts: ENST00000555721.2 ENST00000641790.1 ENST00000656216.1 ENST00000663851.1 ENST00000665707.1 ENST00000666626.1 ENST00000668007.1 ENST00000669193.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
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| CDS CAA 90 bp | CAGTTAAGCAAGATGGCTGCTCTTGGAATGGAAGAACTACTCTCTTaGCTGTTGTTGGTCGCTTTCTCAAAACTACTGGAAAAATGGATC | + |
|
Preference number: 6 (lower is better) Translates to: QLSKMAALGMEELLS*LLLVAFSKLLEKWI Trigger: GATCCATTTTTCCAGTAGTTTTGAGAAAGCGACCAACAACAGCAAAGAGAGTAGTTCTTCCATTCCAAGAGCAGCCATCTTGCTTAACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 11 transcripts: ENST00000555721.2 ENST00000641790.1 ENST00000656216.1 ENST00000663851.1 ENST00000665707.1 ENST00000666626.1 ENST00000668007.1 ENST00000669193.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
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| CDS CAA 90 bp | GTTTTAGCATTTTGCTCAGACCTGCCACCTTGTTCATGCGGAAACTaGCTTATGAGAATGGGAAGTAAGGAAGGCAGGAACTTATATCTT | + |
|
Preference number: 6 (lower is better) Translates to: VLAFCSDLPPCSCGN*LMRMGSKEGRNLYL Trigger: AAGATATAAGTTCCTGCCTTCCTTACTTCCCATTCTCATAAGCAAGTTTCCGCATGAACAAGGTGGCAGGTCTGAGCAAAATGCTAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554640.5 |
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| CDS GCA 72 bp | TTTCTTCTGCCCAAGTTCACCCTCTCTAGTCGATTCTaGTCCAAGATCATTTCATCCACACGTCTATTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: FLLPKFTLSSRF*SKIISSTRLFL Trigger: TAAAAATAGACGTGTGGATGAAATGATCTTGGAGCAGAATCGACTAGAGAGGGTGAACTTGGGCAGAAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000655534.1 ENST00000656216.1 ENST00000666626.1 ENST00000669634.1 ENST00000669648.1 ENST00000670919.1 |
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| CDS GCA 72 bp | TTTGCTGAACAATCATCTTCTGAAACATCCCACTTCTaGTGTGGTATCAACTTTCCCGAAACATATTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FAEQSSSETSHF*CGINFPETYSQ Trigger: CTGGGAATATGTTTCGGGAAAGTTGATACCACAGCAGAAGTGGGATGTTTCAGAAGATGATTGTTCAGCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664807.1 |
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| CDS CCA 72 bp | CTCTTGGAATGGAAGAACTACTCTCTTTGCTGTTGTTaGTCGCTTTCTCAAAACTACTGGAAAAATGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: LLEWKNYSLCCC*SLSQNYWKNGS Trigger: GGATCCATTTTTCCAGTAGTTTTGAGAAAGCGACCAACAACAGCAAAGAGAGTAGTTCTTCCATTCCAAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 11 transcripts: ENST00000555721.2 ENST00000641790.1 ENST00000656216.1 ENST00000663851.1 ENST00000665707.1 ENST00000666626.1 ENST00000668007.1 ENST00000669193.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
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| CDS CCA 72 bp | TCCACACACATTTCAAAGAGAGACGTTTGTTCCCTCTaGCATGAGGAACAATTACCCAATTATCTATGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: STHISKRDVCSL*HEEQLPNYLCR Trigger: TCTGCATAGATAATTGGGTAATTGTTCCTCATGCCAGAGGGAACAAACGTCTCTCTTTGAAATGTGTGTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554640.5 |
||
| CDS CAA 72 bp | GCTCTTGGAATGGAAGAACTACTCTCTTTGCTGTTGTaGGTCGCTTTCTCAAAACTACTGGAAAAATGGATC | + |
|
Preference number: 6 (lower is better) Translates to: ALGMEELLSLLL*VAFSKLLEKWI Trigger: GATCCATTTTTCCAGTAGTTTTGAGAAAGCGACCAACAACAGCAAAGAGAGTAGTTCTTCCATTCCAAGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 11 transcripts: ENST00000555721.2 ENST00000641790.1 ENST00000656216.1 ENST00000663851.1 ENST00000665707.1 ENST00000666626.1 ENST00000668007.1 ENST00000669193.1 ENST00000670919.1 ENST00000670932.1 ENST00000671224.1 |
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| CDS TCA 72 bp | GGTTCTCTATCATCAATGAAGACGTTCAAGTTTACCTaGGGAAACAAGGGTTCCCTTTGGAAGTTAGATCAT | + |
|
Preference number: 6 (lower is better) Translates to: GSLSSMKTFKFT*GNKGSLWKLDH Trigger: ATGATCTAACTTCCAAAGGGAACCCTTGTTTCCTCAGGTAAACTTGAACGTCTTCATTGATGATAGAGAACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554640.5 |
||
| CDS TCA 72 bp | ACACATTTCAAAGAGAGACGTTTGTTCCCTCTGGCATaGGGAACAATTACCCAATTATCTATGCAGAATGAT | + |
|
Preference number: 6 (lower is better) Translates to: THFKERRLFPLA*GTITQLSMQND Trigger: ATCATTCTGCATAGATAATTGGGTAATTGTTCCTCATGCCAGAGGGAACAAACGTCTCTCTTTGAAATGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554640.5 |
||
| CDS TCA 72 bp | TTCAATTGTTGTTCATTTTTAGCTCCCACAAGTAGGTaGGAACATGTGAAGTTTGTCTTTCTGTTCCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: FNCCSFLAPTSR*EHVKFVFLFLA Trigger: AGCCAGGAACAGAAAGACAAACTTCACATGTTCTCACCTACTTGTGGGAGCTAAAAATGAACAACAATTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669648.1 |
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| CDS CAA 90 bp | ATCAATGAAGACGTTCAAGTTTACCTGAGGAAACAAGGGTTCCCTTaGGAAGTTAGATCATTTTGGCTCAATTCAAGCTTTGTTTACAGA | + |
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Preference number: 6 (lower is better) Translates to: INEDVQVYLRKQGFP*EVRSFWLNSSFVYR Trigger: TCTGTAAACAAAGCTTGAATTGAGCCAAAATGATCTAACTTCCAAAGGGAACCCTTGTTTCCTCAGGTAAACTTGAACGTCTTCATTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554640.5 |
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| CDS TCA 72 bp | ACAAATCTGTCATGTTCCTTTCCTGGACTAGTATTTTaGCCACATTTCCATATAGAGGGTGACTCTTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: TNLSCSFPGLVF*PHFHIEGDSFK Trigger: TTTAAAAGAGTCACCCTCTATATGGAAATGTGGTCAAAATACTAGTCCAGGAAAGGAACATGACAGATTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554640.5 |
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