Pregenerated sensors for LINC01567 (Homo sapiens)
Ensembl gene IDs: ENSG00000224310Ensembl transcript IDs: ENST00000414816.1
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGGGGGTACCAGCACCCCCAGGCCATCGTAATTAGCATCTGGCCGTaGTCCCAGTCTCCTGGCAGCACATTCCTCATCTTCCTCGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: RGYQHPQAIVISIWP*SQSPGSTFLIFLAS Trigger: GCTGGCGAGGAAGATGAGGAATGTGCTGCCAGGAGACTGGGATCACGGCCAGATGCTAATTACGATGGCCTGGGGGTGCTGGTACCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000414816.1 |
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| CDS TCA 90 bp | CCATCCAGTGGAATCTACAGGGCCATTAGCAGTGCAAGCAGGTGGTaGAGGGACCTTCATCTTATTTGCAGAGAGGCCATGCATAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: PSSGIYRAISSASRW*RDLHLICREAMHRH Trigger: ATGCCTATGCATGGCCTCTCTGCAAATAAGATGAAGGTCCCTTCACCACCTGCTTGCACTGCTAATGGCCCTGTAGATTCCACTGGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414816.1 |
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| CDS GCA 90 bp | GAGGATATGAGATCACAAATGATCTCAGTGTGTTCAGAACTGCCTTaGAAGAGGCAAGCAGGGGCCTCTTTCAGTTTACTCCAGAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: EDMRSQMISVCSELP*KRQAGASFSLLQRK Trigger: CTTCCTCTGGAGTAAACTGAAAGAGGCCCCTGCTTGCCTCTTGCAAGGCAGTTCTGAACACACTGAGATCATTTGTGATCTCATATCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414816.1 |
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| CDS TCA 90 bp | CTTTCTGTAAATGAAGGTCGAGTTTTGCATCAGAGAAAACGTGTTTaGTTGAGGCCAGGGTGGTGGAGAACGGAAGTGACGACAGACAGA | + |
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Preference number: 5 (lower is better) Translates to: LSVNEGRVLHQRKRV*LRPGWWRTEVTTDR Trigger: TCTGTCTGTCGTCACTTCCGTTCTCCACCACCCTGGCCTCAATCAAACACGTTTTCTCTGATGCAAAACTCGACCTTCATTTACAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414816.1 |
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| CDS GCA 90 bp | CAAGCAGGTGGTGAAGGGACCTTCATCTTATTTGCAGAGAGGCCATaGATAGGCATGCTAGCAGGTGTATTTTTCATTGTACTTTCACTG | + |
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Preference number: 5 (lower is better) Translates to: QAGGEGTFILFAERP*IGMLAGVFFIVLSL Trigger: CAGTGAAAGTACAATGAAAAATACACCTGCTAGCATGCCTATGCATGGCCTCTCTGCAAATAAGATGAAGGTCCCTTCACCACCTGCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000414816.1 |
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| CDS TCA 90 bp | CGTGTAATAAGCTGGAGAAAGTCATTTTCATCAGCATCACCTCCATaGAGAGCACTGGGTTTATTTGAAAGAAATTTCTTGATGAATTGC | + |
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Preference number: 5 (lower is better) Translates to: RVISWRKSFSSASPP*RALGLFERNFLMNC Trigger: GCAATTCATCAAGAAATTTCTTTCAAATAAACCCAGTGCTCTTCATGGAGGTGATGCTGATGAAAATGACTTTCTCCAGCTTATTACACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414816.1 |
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| CDS TCA 72 bp | CAGCACCCCCAGGCCATCGTAATTAGCATCTGGCCGTaGTCCCAGTCTCCTGGCAGCACATTCCTCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: QHPQAIVISIWP*SQSPGSTFLIF Trigger: GAAGATGAGGAATGTGCTGCCAGGAGACTGGGATCACGGCCAGATGCTAATTACGATGGCCTGGGGGTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000414816.1 |
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| CDS TCA 72 bp | GTGTCCAGCCCCTCCAGAGGTCAGGCTGATACAGCATaGCCGCAGGCACCCACCATAAATCATGTTGTTAGC | + |
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Preference number: 6 (lower is better) Translates to: VSSPSRGQADTA*PQAPTINHVVS Trigger: GCTAACAACATGATTTATGGTGGGTGCCTGCGGTCATGCTGTATCAGCCTGACCTCTGGAGGGGCTGGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414816.1 |
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| CDS CCA 72 bp | GGAACTCACCTGAGCCTTAGTGTCCATGGCTTTTCTTaGGGATCAGTTACCCAGTGTCCAGCCCCTCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: GTHLSLSVHGFS*GSVTQCPAPPE Trigger: CTCTGGAGGGGCTGGACACTGGGTAACTGATCCCCAAGAAAAGCCATGGACACTAAGGCTCAGGTGAGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414816.1 |
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| CDS TCA 72 bp | ATCCTGCAGGAACAGGTGAAGAGCCAGTCCTTCCTCTaGGATGTGCAGGGTTTAACCATCCCAAGCCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: ILQEQVKSQSFL*DVQGLTIPSLL Trigger: CAAGAGGCTTGGGATGGTTAAACCCTGCACATCTCAGAGGAAGGACTGGCTCTTCACCTGTTCCTGCAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414816.1 |
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| CDS TCA 72 bp | GGAATCTACAGGGCCATTAGCAGTGCAAGCAGGTGGTaGAGGGACCTTCATCTTATTTGCAGAGAGGCCATG | + |
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Preference number: 6 (lower is better) Translates to: GIYRAISSASRW*RDLHLICREAM Trigger: CATGGCCTCTCTGCAAATAAGATGAAGGTCCCTTCACCACCTGCTTGCACTGCTAATGGCCCTGTAGATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414816.1 |
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| CDS GCA 72 bp | GAAAAAGGTGCTCAGGGCAGAATCCAGGCAGGAGCTTaGAGCTGTACCCTCCTAGATAGTCATATGTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: EKGAQGRIQAGA*SCTLLDSHMCS Trigger: ACTGCACATATGACTATCTAGGAGGGTACAGCTGCAAGCTCCTGCCTGGATTCTGCCCTGAGCACCTTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000414816.1 |
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| CDS TCA 72 bp | AATGAAGGTCGAGTTTTGCATCAGAGAAAACGTGTTTaGTTGAGGCCAGGGTGGTGGAGAACGGAAGTGACG | + |
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Preference number: 6 (lower is better) Translates to: NEGRVLHQRKRV*LRPGWWRTEVT Trigger: CGTCACTTCCGTTCTCCACCACCCTGGCCTCAATCAAACACGTTTTCTCTGATGCAAAACTCGACCTTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414816.1 |
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| CDS TCA 72 bp | AGATGTGTCGGGGAGTCCCCAAGACACGCTCAGGTATaGCGATTTGCTGCAAAGAATCGCAGAACTCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: RCVGESPRHAQV*RFAAKNRRTQK Trigger: TTTTTGAGTTCTGCGATTCTTTGCAGCAAATCGTCATACCTGAGCGTGTCTTGGGGACTCCCCGACACATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414816.1 |
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| CDS CAA 90 bp | AGAGGATATGAGATCACAAATGATCTCAGTGTGTTCAGAACTGCCTaGCAAGAGGCAAGCAGGGGCCTCTTTCAGTTTACTCCAGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: RGYEITNDLSVFRTA*QEASRGLFQFTPEE Trigger: TTCCTCTGGAGTAAACTGAAAGAGGCCCCTGCTTGCCTCTTGCAAGGCAGTTCTGAACACACTGAGATCATTTGTGATCTCATATCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414816.1 |
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| CDS CAA 72 bp | GAGATCACAAATGATCTCAGTGTGTTCAGAACTGCCTaGCAAGAGGCAAGCAGGGGCCTCTTTCAGTTTACT | + |
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Preference number: 6 (lower is better) Translates to: EITNDLSVFRTA*QEASRGLFQFT Trigger: AGTAAACTGAAAGAGGCCCCTGCTTGCCTCTTGCAAGGCAGTTCTGAACACACTGAGATCATTTGTGATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414816.1 |
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| CDS GCA 72 bp | GGTGAAGGGACCTTCATCTTATTTGCAGAGAGGCCATaGATAGGCATGCTAGCAGGTGTATTTTTCATTGTA | + |
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Preference number: 6 (lower is better) Translates to: GEGTFILFAERP*IGMLAGVFFIV Trigger: TACAATGAAAAATACACCTGCTAGCATGCCTATGCATGGCCTCTCTGCAAATAAGATGAAGGTCCCTTCACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000414816.1 |
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| CDS TCA 72 bp | GAAATAACCCAAATATCCAGCATTAGGGGAAATGGTTaGGAAAATTACAAATCCATCCAGTGGAATCTACAG | + |
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Preference number: 6 (lower is better) Translates to: EITQISSIRGNG*ENYKSIQWNLQ Trigger: CTGTAGATTCCACTGGATGGATTTGTAATTTTCTCAACCATTTCCCCTAATGCTGGATATTTGGGTTATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414816.1 |
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