Pregenerated sensors for LINC01561 (Homo sapiens)
Ensembl gene IDs: ENSG00000177234Ensembl transcript IDs: ENST00000369071.4, ENST00000623529.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCACAGAGGGGAGTGACACCCACAAGGCCACACGCTGGTGACTTTTaGGGATGGGAATGCAGAGCCCTGAGGCCTCACCTGCAGTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: PQRGVTPTRPHAGDF*GWECRALRPHLQSP Trigger: GGGAGACTGCAGGTGAGGCCTCAGGGCTCTGCATTCCCATCCCCAAAAGTCACCAGCGTGTGGCCTTGTGGGTGTCACTCCCCTCTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CCA 90 bp | CCCTCTGGGAGTCTGTTTGGCAACTCAGAGGATGCTCTGAGCACCTaGGGGAAGAAAGTACTTGCTGGCCTCACCCCTGGGACTCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: PSGSLFGNSEDALST*GKKVLAGLTPGTLQ Trigger: CTGGAGAGTCCCAGGGGTGAGGCCAGCAAGTACTTTCTTCCCCCAGGTGCTCAGAGCATCCTCTGAGTTGCCAAACAGACTCCCAGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS TCA 90 bp | GTGGCACCAGGCTCTCCAGAACCCCAGTGTCGGAAGGTGTCCCTCTaGGCATGGAAGATTTTCCACCACGATGGAGCAGCCGGATTCTCA | + |
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Preference number: 5 (lower is better) Translates to: VAPGSPEPQCRKVSL*AWKIFHHDGAAGFS Trigger: TGAGAATCCGGCTGCTCCATCGTGGTGGAAAATCTTCCATGCTCAGAGGGACACCTTCCGACACTGGGGTTCTGGAGAGCCTGGTGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS TCA 90 bp | GATTCTCAATGGCCAGAGGTGCAGGGAGAGCAGTCAGGCTTGTCCTaGGGAGCAGTGACAAGGCAGATGGCACCACCTTGTGAGAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: DSQWPEVQGEQSGLS*GAVTRQMAPPCERG Trigger: TCCTCTCTCACAAGGTGGTGCCATCTGCCTTGTCACTGCTCCTCAGGACAAGCCTGACTGCTCTCCCTGCACCTCTGGCCATTGAGAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS TCA 90 bp | AGGCCTCACCTGCAGTCTCCCTGTCCCTCGACGTTGCTTCCCATGTaGAACTGGCCACAATTCAAGGAGACAGGCAGAGCAAAGGGGGTT | + |
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Preference number: 5 (lower is better) Translates to: RPHLQSPCPSTLLPM*NWPQFKETGRAKGV Trigger: AACCCCCTTTGCTCTGCCTGTCTCCTTGAATTGTGGCCAGTTTCACATGGGAAGCAACGTCGAGGGACAGGGAGACTGCAGGTGAGGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CCA 90 bp | GTGTCGGAAGGTGTCCCTCTGAGCATGGAAGATTTTCCACCACGATaGAGCAGCCGGATTCTCAATGGCCAGAGGTGCAGGGAGAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: VSEGVPLSMEDFPPR*SSRILNGQRCRESS Trigger: ACTGCTCTCCCTGCACCTCTGGCCATTGAGAATCCGGCTGCTCCATCGTGGTGGAAAATCTTCCATGCTCAGAGGGACACCTTCCGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CCA 90 bp | GGGGAGCACGCAGCTTTGGGCTGCAGAAGTCCATCTGGAAAGGCTTaGAAACTGACCACCCCAGGCAGGAAGAACAACCAAATTCACTGC | + |
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Preference number: 5 (lower is better) Translates to: GEHAALGCRSPSGKA*KLTTPGRKNNQIHC Trigger: GCAGTGAATTTGGTTGTTCTTCCTGCCTGGGGTGGTCAGTTTCCAAGCCTTTCCAGATGGACTTCTGCAGCCCAAAGCTGCGTGCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CCA 90 bp | AGAGCAGCCAGTCCTCACACCCTGCCCCCAGAATGGAAGAACAGGTaGAAGCTAATACCATCACTGCACAGTATCGTTGGGAAGTTGTAT | + |
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Preference number: 5 (lower is better) Translates to: RAASPHTLPPEWKNR*KLIPSLHSIVGKLY Trigger: ATACAACTTCCCAACGATACTGTGCAGTGATGGTATTAGCTTCCACCTGTTCTTCCATTCTGGGGGCAGGGTGTGAGGACTGGCTGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CCA 90 bp | CTCTGCAGAGAGATTGCAGGATTCAAATTCCGGTCGTCTGCTCACTaGCTGTGTGATATAGGTCAAGGTTCTAAACCTCTCTGTCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: LCREIAGFKFRSSAH*LCDIGQGSKPLCPS Trigger: AGAGGGACAGAGAGGTTTAGAACCTTGACCTATATCACACAGCCAGTGAGCAGACGACCGGAATTTGAATCCTGCAATCTCTCTGCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS GCA 90 bp | GAACAACCAAATTCACTGCAGGCCAGAACTGTGTGTGGTATTAAATaGGCAGGCTCTGCAGAGAGATTGCAGGATTCAAATTCCGGTCGT | + |
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Preference number: 5 (lower is better) Translates to: EQPNSLQARTVCGIK*AGSAERLQDSNSGR Trigger: ACGACCGGAATTTGAATCCTGCAATCTCTCTGCAGAGCCTGCGCATTTAATACCACACACAGTTCTGGCCTGCAGTGAATTTGGTTGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CCA 90 bp | CACAGATATACCACAATACAAGCTTCCGCAGAGCCAAAGAAGCAATaGCTCTGCTATTACATAGGCCTCGATGCTGTTGTCTTGCTCTCA | + |
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Preference number: 5 (lower is better) Translates to: HRYTTIQASAEPKKQ*LCYYIGLDAVVLLS Trigger: TGAGAGCAAGACAACAGCATCGAGGCCTATGTAATAGCAGAGCCATTGCTTCTTTGGCTCTGCGGAAGCTTGTATTGTGGTATATCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS TCA 90 bp | GCCTTCTCTGATCCCCAGTTCATCTGTAAAGTGGTGGAAATTGGATaGACGAACCCATTGCACAGAATATCCAGTGCTACTCAAAATCCT | + |
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Preference number: 5 (lower is better) Translates to: AFSDPQFICKVVEIG*TNPLHRISSATQNP Trigger: AGGATTTTGAGTAGCACTGGATATTCTGTGCAATGGGTTCGTTCATCCAATTTCCACCACTTTACAGATGAACTGGGGATCAGAGAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS GCA 90 bp | CCCAGTTCATCTGTAAAGTGGTGGAAATTGGATGAACGAACCCATTaGACAGAATATCCAGTGCTACTCAAAATCCTGGCACTGAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: PSSSVKWWKLDERTH*TEYPVLLKILALSS Trigger: AGAACTCAGTGCCAGGATTTTGAGTAGCACTGGATATTCTGTGCAATGGGTTCGTTCATCCAATTTCCACCACTTTACAGATGAACTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CCA 72 bp | GTGTCTCCCACTCCTACCCCTCCCCCTCTTGTCACATaGCTCCTTGTCTCGTGGCACCAGGCTCTCCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: VSPTPTPPPLVT*LLVSWHQALQN Trigger: GTTCTGGAGAGCCTGGTGCCACGAGACAAGGAGCCATGTGACAAGAGGGGGAGGGGTAGGAGTGGGAGACAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS TCA 72 bp | TGGCCAGAGGTGCAGGGAGAGCAGTCAGGCTTGTCCTaGGGAGCAGTGACAAGGCAGATGGCACCACCTTGT | + |
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Preference number: 6 (lower is better) Translates to: WPEVQGEQSGLS*GAVTRQMAPPC Trigger: ACAAGGTGGTGCCATCTGCCTTGTCACTGCTCCTCAGGACAAGCCTGACTGCTCTCCCTGCACCTCTGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS GCA 72 bp | GACAAGGGCCTGCACGGGGAGCACGCAGCTTTGGGCTaGAGAAGTCCATCTGGAAAGGCTTGGAAACTGACC | + |
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Preference number: 6 (lower is better) Translates to: DKGLHGEHAALG*RSPSGKAWKLT Trigger: GGTCAGTTTCCAAGCCTTTCCAGATGGACTTCTGCAGCCCAAAGCTGCGTGCTCCCCGTGCAGGCCCTTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CCA 72 bp | CACCTGGGGGAAGAAAGTACTTGCTGGCCTCACCCCTaGGACTCTCCAGGCCATCTGTGCTTTCTCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: HLGEESTCWPHP*DSPGHLCFLCS Trigger: GGAGCAGAGAAAGCACAGATGGCCTGGAGAGTCCCAGGGGTGAGGCCAGCAAGTACTTTCTTCCCCCAGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CCA 72 bp | GCTCTGACAAGGGCCTGCACGGGGAGCACGCAGCTTTaGGCTGCAGAAGTCCATCTGGAAAGGCTTGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: ALTRACTGSTQL*AAEVHLERLGN Trigger: GTTTCCAAGCCTTTCCAGATGGACTTCTGCAGCCCAAAGCTGCGTGCTCCCCGTGCAGGCCCTTGTCAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CAA 90 bp | TGTCCCAAACCACACTTGTGTCTCCCACTCCTACCCCTCCCCCTCTaGTCACATGGCTCCTTGTCTCGTGGCACCAGGCTCTCCAGAACC | + |
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Preference number: 6 (lower is better) Translates to: CPKPHLCLPLLPLPL*SHGSLSRGTRLSRT Trigger: GGTTCTGGAGAGCCTGGTGCCACGAGACAAGGAGCCATGTGACAAGAGGGGGAGGGGTAGGAGTGGGAGACACAAGTGTGGTTTGGGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS TCA 72 bp | GGCCTCGATGCTGTTGTCTTGCTCTCACAAGCTGTGTaGCCTTGGGGAGGTGGCTTGCCTTCTCTGATCCCC | + |
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Preference number: 6 (lower is better) Translates to: GLDAVVLLSQAV*PWGGGLPSLIP Trigger: GGGGATCAGAGAAGGCAAGCCACCTCCCCAAGGTCACACAGCTTGTGAGAGCAAGACAACAGCATCGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CAA 72 bp | GGCAGCAGTCCAGCCTCTGCATGTCACTGCACAAAGTaGACTCCACAGAGGGGAGTGACACCCACAAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: GSSPASACHCTK*TPQRGVTPTRP Trigger: TGGCCTTGTGGGTGTCACTCCCCTCTGTGGAGTCAACTTTGTGCAGTGACATGCAGAGGCTGGACTGCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CAA 72 bp | TGCTCTGACAAGGGCCTGCACGGGGAGCACGCAGCTTaGGGCTGCAGAAGTCCATCTGGAAAGGCTTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: CSDKGLHGEHAA*GCRSPSGKAWK Trigger: TTTCCAAGCCTTTCCAGATGGACTTCTGCAGCCCAAAGCTGCGTGCTCCCCGTGCAGGCCCTTGTCAGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CAA 90 bp | ATCTTTCTCTGCTCTGACAAGGGCCTGCACGGGGAGCACGCAGCTTaGGGCTGCAGAAGTCCATCTGGAAAGGCTTGGAAACTGACCACC | + |
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Preference number: 6 (lower is better) Translates to: IFLCSDKGLHGEHAA*GCRSPSGKAWKLTT Trigger: GGTGGTCAGTTTCCAAGCCTTTCCAGATGGACTTCTGCAGCCCAAAGCTGCGTGCTCCCCGTGCAGGCCCTTGTCAGAGCAGAGAAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CCA 72 bp | AGTCTGTTTGGCAACTCAGAGGATGCTCTGAGCACCTaGGGGAAGAAAGTACTTGCTGGCCTCACCCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SLFGNSEDALST*GKKVLAGLTPG Trigger: CCCAGGGGTGAGGCCAGCAAGTACTTTCTTCCCCCAGGTGCTCAGAGCATCCTCTGAGTTGCCAAACAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CCA 72 bp | AGATTTTCCACCACGATGGAGCAGCCGGATTCTCAATaGCCAGAGGTGCAGGGAGAGCAGTCAGGCTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: RFSTTMEQPDSQ*PEVQGEQSGLS Trigger: GGACAAGCCTGACTGCTCTCCCTGCACCTCTGGCCATTGAGAATCCGGCTGCTCCATCGTGGTGGAAAATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CCA 72 bp | GGTGTCCCTCTGAGCATGGAAGATTTTCCACCACGATaGAGCAGCCGGATTCTCAATGGCCAGAGGTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GVPLSMEDFPPR*SSRILNGQRCR Trigger: CCTGCACCTCTGGCCATTGAGAATCCGGCTGCTCCATCGTGGTGGAAAATCTTCCATGCTCAGAGGGACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CAA 90 bp | CGGGGAGCACGCAGCTTTGGGCTGCAGAAGTCCATCTGGAAAGGCTaGGAAACTGACCACCCCAGGCAGGAAGAACAACCAAATTCACTG | + |
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Preference number: 6 (lower is better) Translates to: RGARSFGLQKSIWKG*ETDHPRQEEQPNSL Trigger: CAGTGAATTTGGTTGTTCTTCCTGCCTGGGGTGGTCAGTTTCCAAGCCTTTCCAGATGGACTTCTGCAGCCCAAAGCTGCGTGCTCCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS TCA 72 bp | CTGCAGTCTCCCTGTCCCTCGACGTTGCTTCCCATGTaGAACTGGCCACAATTCAAGGAGACAGGCAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: LQSPCPSTLLPM*NWPQFKETGRA Trigger: TGCTCTGCCTGTCTCCTTGAATTGTGGCCAGTTTCACATGGGAAGCAACGTCGAGGGACAGGGAGACTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CAA 72 bp | CGATGCTGTTGTCTTGCTCTCACAAGCTGTGTGACCTaGGGGAGGTGGCTTGCCTTCTCTGATCCCCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: RCCCLALTSCVT*GRWLAFSDPQF Trigger: GAACTGGGGATCAGAGAAGGCAAGCCACCTCCCCAAGGTCACACAGCTTGTGAGAGCAAGACAACAGCATCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CAA 72 bp | CGCAGCTTTGGGCTGCAGAAGTCCATCTGGAAAGGCTaGGAAACTGACCACCCCAGGCAGGAAGAACAACCA | + |
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Preference number: 6 (lower is better) Translates to: RSFGLQKSIWKG*ETDHPRQEEQP Trigger: TGGTTGTTCTTCCTGCCTGGGGTGGTCAGTTTCCAAGCCTTTCCAGATGGACTTCTGCAGCCCAAAGCTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CCA 72 bp | GCAGCTTTGGGCTGCAGAAGTCCATCTGGAAAGGCTTaGAAACTGACCACCCCAGGCAGGAAGAACAACCAA | + |
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Preference number: 6 (lower is better) Translates to: AALGCRSPSGKA*KLTTPGRKNNQ Trigger: TTGGTTGTTCTTCCTGCCTGGGGTGGTCAGTTTCCAAGCCTTTCCAGATGGACTTCTGCAGCCCAAAGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS GCA 72 bp | AAATCTAGATGGACAACAACTTCAGCCATCTTTCTCTaGTCTGACAAGGGCCTGCACGGGGAGCACGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: KSRWTTTSAIFL*SDKGLHGEHAA Trigger: AGCTGCGTGCTCCCCGTGCAGGCCCTTGTCAGAGCAGAGAAAGATGGCTGAAGTTGTTGTCCATCTAGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CCA 72 bp | AGTCCTCACACCCTGCCCCCAGAATGGAAGAACAGGTaGAAGCTAATACCATCACTGCACAGTATCGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: SPHTLPPEWKNR*KLIPSLHSIVG Trigger: CCCAACGATACTGTGCAGTGATGGTATTAGCTTCCACCTGTTCTTCCATTCTGGGGGCAGGGTGTGAGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CAA 90 bp | CATAGGCCTCGATGCTGTTGTCTTGCTCTCACAAGCTGTGTGACCTaGGGGAGGTGGCTTGCCTTCTCTGATCCCCAGTTCATCTGTAAA | + |
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Preference number: 6 (lower is better) Translates to: HRPRCCCLALTSCVT*GRWLAFSDPQFICK Trigger: TTTACAGATGAACTGGGGATCAGAGAAGGCAAGCCACCTCCCCAAGGTCACACAGCTTGTGAGAGCAAGACAACAGCATCGAGGCCTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CAA 72 bp | GTGTGTGGTATTAAATGCGCAGGCTCTGCAGAGAGATaGCAGGATTCAAATTCCGGTCGTCTGCTCACTGGC | + |
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Preference number: 6 (lower is better) Translates to: VCGIKCAGSAER*QDSNSGRLLTG Trigger: GCCAGTGAGCAGACGACCGGAATTTGAATCCTGCAATCTCTCTGCAGAGCCTGCGCATTTAATACCACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CAA 90 bp | GCCAGAACTGTGTGTGGTATTAAATGCGCAGGCTCTGCAGAGAGATaGCAGGATTCAAATTCCGGTCGTCTGCTCACTGGCTGTGTGATA | + |
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Preference number: 6 (lower is better) Translates to: ARTVCGIKCAGSAER*QDSNSGRLLTGCVI Trigger: TATCACACAGCCAGTGAGCAGACGACCGGAATTTGAATCCTGCAATCTCTCTGCAGAGCCTGCGCATTTAATACCACACACAGTTCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS GCA 72 bp | TGTGTGGTATTAAATGCGCAGGCTCTGCAGAGAGATTaGAGGATTCAAATTCCGGTCGTCTGCTCACTGGCT | + |
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Preference number: 6 (lower is better) Translates to: CVVLNAQALQRD*RIQIPVVCSLA Trigger: AGCCAGTGAGCAGACGACCGGAATTTGAATCCTGCAATCTCTCTGCAGAGCCTGCGCATTTAATACCACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CCA 72 bp | GGCTTGCCTTCTCTGATCCCCAGTTCATCTGTAAAGTaGTGGAAATTGGATGAACGAACCCATTGCACAGAA | + |
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Preference number: 6 (lower is better) Translates to: GLPSLIPSSSVK*WKLDERTHCTE Trigger: TTCTGTGCAATGGGTTCGTTCATCCAATTTCCACCACTTTACAGATGAACTGGGGATCAGAGAAGGCAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CCA 72 bp | GAGATTGCAGGATTCAAATTCCGGTCGTCTGCTCACTaGCTGTGTGATATAGGTCAAGGTTCTAAACCTCTC | + |
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Preference number: 6 (lower is better) Translates to: EIAGFKFRSSAH*LCDIGQGSKPL Trigger: GAGAGGTTTAGAACCTTGACCTATATCACACAGCCAGTGAGCAGACGACCGGAATTTGAATCCTGCAATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS GCA 72 bp | AATTCACTGCAGGCCAGAACTGTGTGTGGTATTAAATaGGCAGGCTCTGCAGAGAGATTGCAGGATTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: NSLQARTVCGIK*AGSAERLQDSN Trigger: ATTTGAATCCTGCAATCTCTCTGCAGAGCCTGCGCATTTAATACCACACACAGTTCTGGCCTGCAGTGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS TCA 72 bp | GATCCCCAGTTCATCTGTAAAGTGGTGGAAATTGGATaGACGAACCCATTGCACAGAATATCCAGTGCTACT | + |
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Preference number: 6 (lower is better) Translates to: DPQFICKVVEIG*TNPLHRISSAT Trigger: AGTAGCACTGGATATTCTGTGCAATGGGTTCGTTCATCCAATTTCCACCACTTTACAGATGAACTGGGGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CAA 90 bp | AACAGGTGGAAGCTAATACCATCACTGCACAGTATCGTTGGGAAGTaGTATGGCATCCCTTTGTTTGAGTTAATAAAGCTCTTTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: NRWKLIPSLHSIVGK*YGIPLFELIKLFPS Trigger: GGAGGGAAAGAGCTTTATTAACTCAAACAAAGGGATGCCATACAACTTCCCAACGATACTGTGCAGTGATGGTATTAGCTTCCACCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS GCA 72 bp | GCCTCATTACATCTGTTTAAGAAACAACATAGCCACTaGAGAGATTCACAGCAGGCTGAACACGTGTTTATC | + |
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Preference number: 6 (lower is better) Translates to: ASLHLFKKQHSH*RDSQQAEHVFI Trigger: GATAAACACGTGTTCAGCCTGCTGTGAATCTCTGCAGTGGCTATGTTGTTTCTTAAACAGATGTAATGAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CAA 72 bp | CTGCACAGTATCGTTGGGAAGTTGTATGGCATCCCTTaGTTTGAGTTAATAAAGCTCTTTCCCTCCTTTAGA | + |
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Preference number: 6 (lower is better) Translates to: LHSIVGKLYGIP*FELIKLFPSFR Trigger: TCTAAAGGAGGGAAAGAGCTTTATTAACTCAAACAAAGGGATGCCATACAACTTCCCAACGATACTGTGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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| CDS CAA 72 bp | AAGCTAATACCATCACTGCACAGTATCGTTGGGAAGTaGTATGGCATCCCTTTGTTTGAGTTAATAAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: KLIPSLHSIVGK*YGIPLFELIKL Trigger: GAGCTTTATTAACTCAAACAAAGGGATGCCATACAACTTCCCAACGATACTGTGCAGTGATGGTATTAGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369071.4 ENST00000623529.1 |
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