Pregenerated sensors for LINC01556 (Homo sapiens)
Ensembl gene IDs: ENSG00000204709, ENSG00000206526, ENSG00000237313Ensembl transcript IDs: ENST00000383656.2, ENST00000421470.1, ENST00000434916.1, ENST00000438403.1, ENST00000438996.1
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACAGACGGCTGCGAAGGCAATTaGGTCTGGACTTTGCGAAAG | + |
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Preference number: 2 (lower is better) Translates to: YVVQGRGQFLNQPRSPTDGCEGN*VWTLRK Trigger: CTTTCGCAAAGTCCAGACTCAATTGCCTTCGCAGCC...GTCTGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| 3UTR-3UTR TCA 90 bp | AACTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACAGGCTGCGAAGGCAATTaGGTCTGGACTTTGCGAAAG | + |
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Preference number: 2 (lower is better) Translates to: NYVVQGRGQFLNQPRSPTGCEGN*VWTLRK Trigger: CTTTCGCAAAGTCCAGACTCAATTGCCTTCGCAGCC...TGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| 3UTR-3UTR GCA 90 bp | TACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACAGACATTGAGTCTGGACTTTaGGAAAGGCCTTCCTGTACG | + |
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Preference number: 2 (lower is better) Translates to: YVVQGRGQFLNQPRSPTDIESGL*ERPSCT Trigger: CGTACAGGAAGGCCTTTCGCAAAGTCCAGACTCAAT...GTCTGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| 3UTR-3UTR GCA 90 bp | CTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACAGAATTGAGTCTGGACTTTaGGAAAGGCCTTCCTGTACG | + |
|
Preference number: 2 (lower is better) Translates to: LRSTRQGPIPKPTSFSHRIESGL*ERPSCT Trigger: CGTACAGGAAGGCCTTTCGCAAAGTCCAGACTCAAT...TCTGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| 3UTR-3UTR GCA 90 bp | AAACTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACATTGAGTCTGGACTTTaGGAAAGGCCTTCCTGTACG | + |
|
Preference number: 2 (lower is better) Translates to: KLRSTRQGPIPKPTSFSHIESGL*ERPSCT Trigger: CGTACAGGAAGGCCTTTCGCAAAGTCCAGACTCAAT...GTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| 3UTR-3UTR GCA 90 bp | AACTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACAATTGAGTCTGGACTTTaGGAAAGGCCTTCCTGTACG | + |
|
Preference number: 2 (lower is better) Translates to: NYVVQGRGQFLNQPRSPTIESGL*ERPSCT Trigger: CGTACAGGAAGGCCTTTCGCAAAGTCCAGACTCAAT...TGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| 3UTR-3UTR TCA 90 bp | ACACTTTGGATGACAAAACTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAGGCTGCGAAGGCAATTaGGTCTGGACTTTGCGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: TLWMTKLRSTRQGPIPKPGCEGN*VWTLRK Trigger: CTTTCGCAAAGTCCAGACTCAATTGCCTTCGCAGCC...TGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAGTTTTGTCATCCAAAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| 3UTR-3UTR GCA 90 bp | ACACTTTGGATGACAAAACTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAATTGAGTCTGGACTTTaGGAAAGGCCTTCCTGTACG | + |
|
Preference number: 2 (lower is better) Translates to: TLWMTKLRSTRQGPIPKPIESGL*ERPSCT Trigger: CGTACAGGAAGGCCTTTCGCAAAGTCCAGACTCAAT...TGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAGTTTTGTCATCCAAAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| 3UTR-3UTR CAA 90 bp | TACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACAGACGGGCTGCGAAGGCAATaGAGTCTGGACTTTGCGAAA | + |
|
Preference number: 3 (lower is better) Translates to: YVVQGRGQFLNQPRSPTDGLRRQ*SLDFAK Trigger: TTTCGCAAAGTCCAGACTCAATTGCCTTCGCAGCCC...GTCTGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| 3UTR-3UTR CAA 90 bp | CTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACAGAGGGCTGCGAAGGCAATaGAGTCTGGACTTTGCGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LRSTRQGPIPKPTSFSHRGLRRQ*SLDFAK Trigger: TTTCGCAAAGTCCAGACTCAATTGCCTTCGCAGCCC...TCTGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| 3UTR-3UTR CAA 90 bp | AACTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACAGGGCTGCGAAGGCAATaGAGTCTGGACTTTGCGAAA | + |
|
Preference number: 3 (lower is better) Translates to: NYVVQGRGQFLNQPRSPTGLRRQ*SLDFAK Trigger: TTTCGCAAAGTCCAGACTCAATTGCCTTCGCAGCCC...TGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | GCTGCGAAGGCAATTGAGTCTGGACTTTGCGAAAGGCCTTCCTGTACGGGGCCCTGGATGTGGAGCCCATaGCGTCCTCTGGCGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AAKAIESGLCERPSCTGPWMWSP*RPLALS Trigger: CGAGAGCGCCAGAGGACGCCATGGGCTCCACATCCA...GGGCCCCGTACAGGAAGGCCTTTCGCAAAGTCCAGACTCAATTGCCTTCGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR GCA 90 bp | GCTGCGAAGGCAATTGAGTCTGGACTTTGCGAAAGGCCTTCCTGTACGGGGCCCGCAGGATTCCCCTCCTaGACCACCTGCAGCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AAKAIESGLCERPSCTGPAGFPS*TTCSIL Trigger: CAGGATGCTGCAGGTGGTGCAGGAGGGGAATCCTGC...GGGCCCCGTACAGGAAGGCCTTTCGCAAAGTCCAGACTCAATTGCCTTCGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | AGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACAGACCTTCCGCCCATGGCGTCCTCTaGCGCTCTCGGTCTCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: STRQGPIPKPTSFSHRPSAHGVL*RSRSLR Trigger: TCGAAGAGACCGAGAGCGCCAGAGGACGCCATGGGC...GGAAGGTCTGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | GCTGCGAAGGCAATTGAGTCTGGACTTTGCGAAAGGCCTTCCTGTACGGGGCCCGAATCCAAGTGGATGTaGAGCCCATGGCGTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AAKAIESGLCERPSCTGPESKWM*SPWRPL Trigger: CAGAGGACGCCATGGGCTCCACATCCACTTGGATTC...GGGCCCCGTACAGGAAGGCCTTTCGCAAAGTCCAGACTCAATTGCCTTCGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR TCA 90 bp | GCTGCGAAGGCAATTGAGTCTGGACTTTGCGAAAGGCCTTCCTGTACGGGGCCCGGCTGCGAAGGCAATTaGGTCTGGACTTTGCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AAKAIESGLCERPSCTGPGCEGN*VWTLRK Trigger: CTTTCGCAAAGTCCAGACTCAATTGCCTTCGCAGCC...GGGCCCCGTACAGGAAGGCCTTTCGCAAAGTCCAGACTCAATTGCCTTCGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | CTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACAGAGCCCATGGCGTCCTCTaGCGCTCTCGGTCTCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LRSTRQGPIPKPTSFSHRAHGVL*RSRSLR Trigger: TCGAAGAGACCGAGAGCGCCAGAGGACGCCATGGGC...TCTGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | CTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACAGATGGATGTGGAGCCCATaGCGTCCTCTGGCGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LRSTRQGPIPKPTSFSHRWMWSP*RPLALS Trigger: CGAGAGCGCCAGAGGACGCCATGGGCTCCACATCCA...TCTGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR GCA 90 bp | CTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACAGACCCTCCTGCACCACCTaGAGCATCCTGTCCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LRSTRQGPIPKPTSFSHRPSCTT*SILSRI Trigger: GATCCTGGACAGGATGCTGCAGGTGGTGCAGGAGGG...TCTGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR GCA 90 bp | CTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACAGAGCAGGATTCCCCTCCTaGACCACCTGCAGCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRSTRQGPIPKPTSFSHRAGFPS*TTCSIL Trigger: CAGGATGCTGCAGGTGGTGCAGGAGGGGAATCCTGC...TCTGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR GCA 90 bp | TACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACAGACGCAGGATTCCCCTCCTaGACCACCTGCAGCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YVVQGRGQFLNQPRSPTDAGFPS*TTCSIL Trigger: CAGGATGCTGCAGGTGGTGCAGGAGGGGAATCCTGC...GTCTGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | AACTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACAGCCCATGGCGTCCTCTaGCGCTCTCGGTCTCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: NYVVQGRGQFLNQPRSPTAHGVL*RSRSLR Trigger: TCGAAGAGACCGAGAGCGCCAGAGGACGCCATGGGC...TGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | CCCACAGACCTTCCTAAGGAAACTTTAAGGGCTGCGAAGGCAATTGAGTCTGGAGCCCATGGCGTCCTCTaGCGCTCTCGGTCTCTTCGA | + |
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Preference number: 4 (lower is better) Translates to: PTDLPKETLRAAKAIESGAHGVL*RSRSLR Trigger: TCGAAGAGACCGAGAGCGCCAGAGGACGCCATGGGC...TCCAGACTCAATTGCCTTCGCAGCCCTTAAAGTTTCCTTAGGAAGGTCTGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | AACTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACATGGATGTGGAGCCCATaGCGTCCTCTGGCGCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: NYVVQGRGQFLNQPRSPTWMWSP*RPLALS Trigger: CGAGAGCGCCAGAGGACGCCATGGGCTCCACATCCA...TGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | AAACTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACTGGATGTGGAGCCCATaGCGTCCTCTGGCGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KLRSTRQGPIPKPTSFSHWMWSP*RPLALS Trigger: CGAGAGCGCCAGAGGACGCCATGGGCTCCACATCCA...GTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR GCA 90 bp | CCCACAGACCTTCCTAAGGAAACTTTAAGGGCTGCGAAGGCAATTGAGTCTGGACCCTCCTGCACCACCTaGAGCATCCTGTCCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PTDLPKETLRAAKAIESGPSCTT*SILSRI Trigger: GATCCTGGACAGGATGCTGCAGGTGGTGCAGGAGGG...TCCAGACTCAATTGCCTTCGCAGCCCTTAAAGTTTCCTTAGGAAGGTCTGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR GCA 90 bp | CGTTCTCCCACAGACCTTCCTAAGGAAACTTTAAGGGCTGCGAAGGCAATTGAGCCCTCCTGCACCACCTaGAGCATCCTGTCCAGGATC | + |
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Preference number: 4 (lower is better) Translates to: RSPTDLPKETLRAAKAIEPSCTT*SILSRI Trigger: GATCCTGGACAGGATGCTGCAGGTGGTGCAGGAGGG...CTCAATTGCCTTCGCAGCCCTTAAAGTTTCCTTAGGAAGGTCTGTGGGAGAACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR GCA 90 bp | AACTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACACCCTCCTGCACCACCTaGAGCATCCTGTCCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: NYVVQGRGQFLNQPRSPTPSCTT*SILSRI Trigger: GATCCTGGACAGGATGCTGCAGGTGGTGCAGGAGGG...TGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR GCA 90 bp | AAACTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACCCCTCCTGCACCACCTaGAGCATCCTGTCCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KLRSTRQGPIPKPTSFSHPSCTT*SILSRI Trigger: GATCCTGGACAGGATGCTGCAGGTGGTGCAGGAGGG...GTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR GCA 90 bp | AACTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACAGCAGGATTCCCCTCCTaGACCACCTGCAGCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NYVVQGRGQFLNQPRSPTAGFPS*TTCSIL Trigger: CAGGATGCTGCAGGTGGTGCAGGAGGGGAATCCTGC...TGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR GCA 90 bp | CGTTCTCCCACAGACCTTCCTAAGGAAACTTTAAGGGCTGCGAAGGCAATTGAGGCAGGATTCCCCTCCTaGACCACCTGCAGCATCCTG | + |
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Preference number: 4 (lower is better) Translates to: RSPTDLPKETLRAAKAIEAGFPS*TTCSIL Trigger: CAGGATGCTGCAGGTGGTGCAGGAGGGGAATCCTGC...CTCAATTGCCTTCGCAGCCCTTAAAGTTTCCTTAGGAAGGTCTGTGGGAGAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR GCA 90 bp | GCTGCGAAGGCAATTGAGTCTGGACTTTGCGAAAGGCCTTCCTGTACGGGGCCCATTGAGTCTGGACTTTaGGAAAGGCCTTCCTGTACG | + |
|
Preference number: 4 (lower is better) Translates to: AAKAIESGLCERPSCTGPIESGL*ERPSCT Trigger: CGTACAGGAAGGCCTTTCGCAAAGTCCAGACTCAAT...GGGCCCCGTACAGGAAGGCCTTTCGCAAAGTCCAGACTCAATTGCCTTCGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | GCTGCGAAGGCAATTGAGTCTGGACTTTGCGAAAGGCCTTCCTGTACGGGGCCCTGTGTTGATGATAAATaGGGCAGGATTCCCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: AAKAIESGLCERPSCTGPCVDDK*GRIPLL Trigger: CAGGAGGGGAATCCTGCCCCATTTATCATCAACACA...GGGCCCCGTACAGGAAGGCCTTTCGCAAAGTCCAGACTCAATTGCCTTCGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | GCTGCGAAGGCAATTGAGTCTGGACTTTGCGAAAGGCCTTCCTGTACGGGGCCCTTCTCATCTCATTTCTaGGCCAGGAACGAGGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: AAKAIESGLCERPSCTGPFSSHF*ARNEES Trigger: AGACTCCTCGTTCCTGGCCCAGAAATGAGATGAGAA...GGGCCCCGTACAGGAAGGCCTTTCGCAAAGTCCAGACTCAATTGCCTTCGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | GCTGCGAAGGCAATTGAGTCTGGACTTTGCGAAAGGCCTTCCTGTACGGGGCCCATGTACCGCCTTTCCTaGAATCCAAGTGGATGTGGA | + |
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Preference number: 4 (lower is better) Translates to: AAKAIESGLCERPSCTGPMYRLS*NPSGCG Trigger: TCCACATCCACTTGGATTCCAGGAAAGGCGGTACAT...GGGCCCCGTACAGGAAGGCCTTTCGCAAAGTCCAGACTCAATTGCCTTCGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | AAACTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACGAATCCAAGTGGATGTaGAGCCCATGGCGTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLRSTRQGPIPKPTSFSHESKWM*SPWRPL Trigger: CAGAGGACGCCATGGGCTCCACATCCACTTGGATTC...GTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | CCCACAGACCTTCCTAAGGAAACTTTAAGGGCTGCGAAGGCAATTGAGTCTGGAGAATCCAAGTGGATGTaGAGCCCATGGCGTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTDLPKETLRAAKAIESGESKWM*SPWRPL Trigger: CAGAGGACGCCATGGGCTCCACATCCACTTGGATTC...TCCAGACTCAATTGCCTTCGCAGCCCTTAAAGTTTCCTTAGGAAGGTCTGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR TCA 90 bp | AAACTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACGGCTGCGAAGGCAATTaGGTCTGGACTTTGCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLRSTRQGPIPKPTSFSHGCEGN*VWTLRK Trigger: CTTTCGCAAAGTCCAGACTCAATTGCCTTCGCAGCC...GTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | AGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACAGACCTTCCTGTGTTGATGATAAATaGGGCAGGATTCCCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: STRQGPIPKPTSFSHRPSCVDDK*GRIPLL Trigger: CAGGAGGGGAATCCTGCCCCATTTATCATCAACACA...GGAAGGTCTGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | AGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACAGACCTTCCTTCTCATCTCATTTCTaGGCCAGGAACGAGGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: STRQGPIPKPTSFSHRPSFSSHF*ARNEES Trigger: AGACTCCTCGTTCCTGGCCCAGAAATGAGATGAGAA...GGAAGGTCTGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | TACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACAGACTGTGTTGATGATAAATaGGGCAGGATTCCCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: YVVQGRGQFLNQPRSPTDCVDDK*GRIPLL Trigger: CAGGAGGGGAATCCTGCCCCATTTATCATCAACACA...GTCTGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | AACTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACAATGTACCGCCTTCCCTaGAATCCAAGTGGATGTGGA | + |
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Preference number: 4 (lower is better) Translates to: NYVVQGRGQFLNQPRSPTMYRLP*NPSGCG Trigger: TCCACATCCACTTGGATTCCAGGGAAGGCGGTACAT...TGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000383656.2 ENST00000421470.1 |
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| CDS-3UTR CCA 90 bp | CTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACAGAATGTACCGCCTTTCCTaGAATCCAAGTGGATGTGGA | + |
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Preference number: 4 (lower is better) Translates to: LRSTRQGPIPKPTSFSHRMYRLS*NPSGCG Trigger: TCCACATCCACTTGGATTCCAGGAAAGGCGGTACAT...TCTGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | AACTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACATGTGTTGATGATAAATaGGGCAGGATTCCCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: NYVVQGRGQFLNQPRSPTCVDDK*GRIPLL Trigger: CAGGAGGGGAATCCTGCCCCATTTATCATCAACACA...TGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | ACACTTTGGATGACAAAACTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAGAATCCAAGTGGATGTaGAGCCCATGGCGTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: TLWMTKLRSTRQGPIPKPESKWM*SPWRPL Trigger: CAGAGGACGCCATGGGCTCCACATCCACTTGGATTC...TGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAGTTTTGTCATCCAAAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | CGTTCTCCCACAGACCTTCCTAAGGAAACTTTAAGGGCTGCGAAGGCAATTGAGTTCTCATCTCATTTCTaGGCCAGGAACGAGGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: RSPTDLPKETLRAAKAIEFSSHF*ARNEES Trigger: AGACTCCTCGTTCCTGGCCCAGAAATGAGATGAGAA...CTCAATTGCCTTCGCAGCCCTTAAAGTTTCCTTAGGAAGGTCTGTGGGAGAACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | AAACTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACTTCTCATCTCATTTCTaGGCCAGGAACGAGGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: KLRSTRQGPIPKPTSFSHFSSHF*ARNEES Trigger: AGACTCCTCGTTCCTGGCCCAGAAATGAGATGAGAA...GTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | AACTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACATTCTCATCTCATTTCTaGGCCAGGAACGAGGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: NYVVQGRGQFLNQPRSPTFSSHF*ARNEES Trigger: AGACTCCTCGTTCCTGGCCCAGAAATGAGATGAGAA...TGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | CGTTCTCCCACAGACCTTCCTAAGGAAACTTTAAGGGCTGCGAAGGCAATTGAGATGTACCGCCTTTCCTaGAATCCAAGTGGATGTGGA | + |
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Preference number: 4 (lower is better) Translates to: RSPTDLPKETLRAAKAIEMYRLS*NPSGCG Trigger: TCCACATCCACTTGGATTCCAGGAAAGGCGGTACAT...CTCAATTGCCTTCGCAGCCCTTAAAGTTTCCTTAGGAAGGTCTGTGGGAGAACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CCA 90 bp | ACACTTTGGATGACAAAACTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCATGTGTTGATGATAAATaGGGCAGGATTCCCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: TLWMTKLRSTRQGPIPKPCVDDK*GRIPLL Trigger: CAGGAGGGGAATCCTGCCCCATTTATCATCAACACA...TGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAGTTTTGTCATCCAAAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CAA 90 bp | AGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACAGACCTTCCGGGCTGCGAAGGCAATaGAGTCTGGACTTTGCGAAA | + |
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Preference number: 5 (lower is better) Translates to: STRQGPIPKPTSFSHRPSGLRRQ*SLDFAK Trigger: TTTCGCAAAGTCCAGACTCAATTGCCTTCGCAGCCC...GGAAGGTCTGTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CAA 90 bp | AAACTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAACCTCGTTCTCCCACGGGCTGCGAAGGCAATaGAGTCTGGACTTTGCGAAA | + |
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Preference number: 5 (lower is better) Translates to: KLRSTRQGPIPKPTSFSHGLRRQ*SLDFAK Trigger: TTTCGCAAAGTCCAGACTCAATTGCCTTCGCAGCCC...GTGGGAGAACGAGGTTGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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| CDS-3UTR CAA 90 bp | ACACTTTGGATGACAAAACTACGTAGTACAAGGCAGGGGCCAATTCCTAAACCAGGGCTGCGAAGGCAATaGAGTCTGGACTTTGCGAAA | + |
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Preference number: 5 (lower is better) Translates to: TLWMTKLRSTRQGPIPKPGLRRQ*SLDFAK Trigger: TTTCGCAAAGTCCAGACTCAATTGCCTTCGCAGCCC...TGGTTTAGGAATTGGCCCCTGCCTTGTACTACGTAGTTTTGTCATCCAAAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000383656.2 ENST00000421470.1 ENST00000434916.1 ENST00000438403.1 ENST00000438996.1 |
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