Pregenerated sensors for LINC01555 (Homo sapiens)
Ensembl gene IDs: ENSG00000180869Ensembl transcript IDs: ENST00000370624.1
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGCCACAACTACAGTCACTTGGGCATTGGGACCCAGCATTTTCCATaGCAGGTCACCATCATGCCAGAAGAGCTGTTTCTAGTCACACCG | + |
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Preference number: 5 (lower is better) Translates to: SHNYSHLGIGTQHFP*QVTIMPEELFLVTP Trigger: CGGTGTGACTAGAAACAGCTCTTCTGGCATGATGGTGACCTGCCATGGAAAATGCTGGGTCCCAATGCCCAAGTGACTGTAGTTGTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS TCA 90 bp | TCCATTCTACAGCTGCAAAGAACCGAATTTTGCAAACAACCTAGGTaGGCTTGGAAGCAGGGTCTTTCCCACGGAGCCTCAGTGGAGACC | + |
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Preference number: 5 (lower is better) Translates to: SILQLQRTEFCKQPR*AWKQGLSHGASVET Trigger: GGTCTCCACTGAGGCTCCGTGGGAAAGACCCTGCTTCCAAGCTCACCTAGGTTGTTTGCAAAATTCGGTTCTTTGCAGCTGTAGAATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS TCA 90 bp | TCCCCACTAAACATGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTaGGAAACCCCCTGGAAACTCTCTGGATACTTGCAGGGTGATTTG | + |
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Preference number: 5 (lower is better) Translates to: SPLNMCVCVCACVCV*ETPWKLSGYLQGDL Trigger: CAAATCACCCTGCAAGTATCCAGAGAGTTTCCAGGGGGTTTCTCACACACACACACACGCACACACACACACACACATGTTTAGTGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS GCA 90 bp | ATACCATGGGTCGAAAGCAAATGCCATTTGGGGATAAGACTGCCATaGAAAGGACCTTGGACTTCCTGCAGGAGAGAAGAGGGTCATTGC | + |
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Preference number: 5 (lower is better) Translates to: IPWVESKCHLGIRLP*KGPWTSCRREEGHC Trigger: GCAATGACCCTCTTCTCTCCTGCAGGAAGTCCAAGGTCCTTTGCATGGCAGTCTTATCCCCAAATGGCATTTGCTTTCGACCCATGGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS CCA 90 bp | GTTCCAGGGAAGGATCCTGTGCTAACTGATAGGTGCCAAGCGTTCTaGTTTTCACTCTGCCTTACTGGGCCTCTCAAGTTCACAAGTGTT | + |
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Preference number: 5 (lower is better) Translates to: VPGKDPVLTDRCQAF*FSLCLTGPLKFTSV Trigger: AACACTTGTGAACTTGAGAGGCCCAGTAAGGCAGAGTGAAAACCAGAACGCTTGGCACCTATCAGTTAGCACAGGATCCTTCCCTGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS TCA 90 bp | ACATGGAGCCCTGACACCATGTTGTTTCTGAAAATGAGCCAACGTTaGCATGGTCCTGGCCCACTGGGTGTTGTTCACTCTGTTGATTAC | + |
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Preference number: 5 (lower is better) Translates to: TWSPDTMLFLKMSQR*HGPGPLGVVHSVDY Trigger: GTAATCAACAGAGTGAACAACACCCAGTGGGCCAGGACCATGTCAACGTTGGCTCATTTTCAGAAACAACATGGTGTCAGGGCTCCATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS CCA 90 bp | TTGGAGTCTCTTGTTGCTGGCTTTGGCAAAGGAAGCAGAAATGCATaGACCACCTCTGTGGACATAGTCAAGTGGCAAGGAATTGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: LESLVAGFGKGSRNA*TTSVDIVKWQGIAG Trigger: ACCTGCAATTCCTTGCCACTTGACTATGTCCACAGAGGTGGTCCATGCATTTCTGCTTCCTTTGCCAAAGCCAGCAACAAGAGACTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS TCA 90 bp | TATGTGATGGACATGTCCATGATTGCCTGCACGGGATTGCATACATaGGATGGTAGGATGTGTCTTGTTGGAGTCTCTTGTTGCTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: YVMDMSMIACTGLHT*DGRMCLVGVSCCWL Trigger: AAGCCAGCAACAAGAGACTCCAACAAGACACATCCTACCATCTCATGTATGCAATCCCGTGCAGGCAATCATGGACATGTCCATCACATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS CCA 90 bp | GGATCCCAAGTACCTAACTGGGCCAAAATTTTAAAGAGAGCCAAGTaGCCAGGCCATTTGCTGACTAGAACTCATATACTCGGAGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: GSQVPNWAKILKRAK*PGHLLTRTHILGVS Trigger: GGAAACTCCGAGTATATGAGTTCTAGTCAGCAAATGGCCTGGCCACTTGGCTCTCTTTAAAATTTTGGCCCAGTTAGGTACTTGGGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS CCA 90 bp | ATCCTTCAAGAGCCAATCCTTCAAGATGGATCCCAAGTACCTAACTaGGCCAAAATTTTAAAGAGAGCCAAGTGGCCAGGCCATTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: ILQEPILQDGSQVPN*AKILKRAKWPGHLL Trigger: CAGCAAATGGCCTGGCCACTTGGCTCTCTTTAAAATTTTGGCCCAGTTAGGTACTTGGGATCCATCTTGAAGGATTGGCTCTTGAAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS CCA 90 bp | AGGGATACTCAGAACAGTGTATTAACAATAGCTCTGTCTACGAGTTaGCCGTTAGACACACTTATAAGGGATGCTGATGTTCCAGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: RDTQNSVLTIALSTS*PLDTLIRDADVPGK Trigger: CTTCCCTGGAACATCAGCATCCCTTATAAGTGTGTCTAACGGCCAACTCGTAGACAGAGCTATTGTTAATACACTGTTCTGAGTATCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS TCA 90 bp | CTTTCCCAAAACTTTGTCTTCCTTAATTTTCCTGTATCAACCAGATaGAGGTGTTCACAGAGGGATACTCAGAACAGTGTATTAACAATA | + |
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Preference number: 5 (lower is better) Translates to: LSQNFVFLNFPVSTR*RCSQRDTQNSVLTI Trigger: TATTGTTAATACACTGTTCTGAGTATCCCTCTGTGAACACCTTCATCTGGTTGATACAGGAAAATTAAGGAAGACAAAGTTTTGGGAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS CCA 90 bp | TTTACTATAAAACCAGGATCCTCCCTTTGTTCTCTGGAAAGTAACTaGTTTACACAGAAAGTTTGTGAACTGTTCCTGAATGAAGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: FTIKPGSSLCSLESN*FTQKVCELFLNEVF Trigger: AAAGACTTCATTCAGGAACAGTTCACAAACTTTCTGTGTAAACCAGTTACTTTCCAGAGAACAAAGGGAGGATCCTGGTTTTATAGTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS TCA 72 bp | CTCTGTGGACATAGTCAAGTGGCAAGGAATTGCAGGTaGCCTCTAGGATCTGAGGGCAGCTCCCCCACCCCG | + |
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Preference number: 6 (lower is better) Translates to: LCGHSQVARNCR*PLGSEGSSPTP Trigger: CGGGGTGGGGGAGCTGCCCTCAGATCCTAGAGGTCACCTGCAATTCCTTGCCACTTGACTATGTCCACAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS CAA 72 bp | ATGGTCGGGTCCTGGCTGAGCCACAACTACAGTCACTaGGGCATTGGGACCCAGCATTTTCCATGGCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: MVGSWLSHNYSH*GIGTQHFPWQV Trigger: GACCTGCCATGGAAAATGCTGGGTCCCAATGCCCAAGTGACTGTAGTTGTGGCTCAGCCAGGACCCGACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS TCA 72 bp | AGGGTCATTGCTAGGAGACTCCCCTCATGGTGTCCATaGACATGGAGCCCTGACACCATGTTGTTTCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: RVIARRLPSWCP*TWSPDTMLFLK Trigger: TTTCAGAAACAACATGGTGTCAGGGCTCCATGTTCATGGACACCATGAGGGGAGTCTCCTAGCAATGACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS GCA 72 bp | GTCGAAAGCAAATGCCATTTGGGGATAAGACTGCCATaGAAAGGACCTTGGACTTCCTGCAGGAGAGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: VESKCHLGIRLP*KGPWTSCRREE Trigger: CTCTTCTCTCCTGCAGGAAGTCCAAGGTCCTTTGCATGGCAGTCTTATCCCCAAATGGCATTTGCTTTCGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS CCA 72 bp | TACAGTCACTTGGGCATTGGGACCCAGCATTTTCCATaGCAGGTCACCATCATGCCAGAAGAGCTGTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: YSHLGIGTQHFP*QVTIMPEELFL Trigger: TAGAAACAGCTCTTCTGGCATGATGGTGACCTGCCATGGAAAATGCTGGGTCCCAATGCCCAAGTGACTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS CCA 72 bp | CTTGTTGCTGGCTTTGGCAAAGGAAGCAGAAATGCATaGACCACCTCTGTGGACATAGTCAAGTGGCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: LVAGFGKGSRNA*TTSVDIVKWQG Trigger: TCCTTGCCACTTGACTATGTCCACAGAGGTGGTCCATGCATTTCTGCTTCCTTTGCCAAAGCCAGCAACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS CCA 72 bp | AAGGATCCTGTGCTAACTGATAGGTGCCAAGCGTTCTaGTTTTCACTCTGCCTTACTGGGCCTCTCAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: KDPVLTDRCQAF*FSLCLTGPLKF Trigger: GAACTTGAGAGGCCCAGTAAGGCAGAGTGAAAACCAGAACGCTTGGCACCTATCAGTTAGCACAGGATCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS CCA 72 bp | AGGATGTGTCTTGTTGGAGTCTCTTGTTGCTGGCTTTaGCAAAGGAAGCAGAAATGCATGGACCACCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: RMCLVGVSCCWL*QRKQKCMDHLC Trigger: ACAGAGGTGGTCCATGCATTTCTGCTTCCTTTGCCAAAGCCAGCAACAAGAGACTCCAACAAGACACATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS CCA 72 bp | GAGCCAATCCTTCAAGATGGATCCCAAGTACCTAACTaGGCCAAAATTTTAAAGAGAGCCAAGTGGCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: EPILQDGSQVPN*AKILKRAKWPG Trigger: GCCTGGCCACTTGGCTCTCTTTAAAATTTTGGCCCAGTTAGGTACTTGGGATCCATCTTGAAGGATTGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS CAA 72 bp | GCACGGGATTGCATACATGAGATGGTAGGATGTGTCTaGTTGGAGTCTCTTGTTGCTGGCTTTGGCAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: ARDCIHEMVGCV*LESLVAGFGKG Trigger: TCCTTTGCCAAAGCCAGCAACAAGAGACTCCAACAAGACACATCCTACCATCTCATGTATGCAATCCCGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS CAA 72 bp | AGGGCTGATTCTCGCTCCCTAATTAGTCCACACCCTTaGAGTGGGCCAATAGAATACAGCAAAGGTGATGGA | + |
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Preference number: 6 (lower is better) Translates to: RADSRSLISPHP*SGPIEYSKGDG Trigger: TCCATCACCTTTGCTGTATTCTATTGGCCCACTCAAAGGGTGTGGACTAATTAGGGAGCGAGAATCAGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS CAA 90 bp | TCTTCATGGAATATGGAAATACCATGGGTCGAAAGCAAATGCCATTaGGGGATAAGACTGCCATGCAAAGGACCTTGGACTTCCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSWNMEIPWVESKCH*GIRLPCKGPWTSCR Trigger: CCTGCAGGAAGTCCAAGGTCCTTTGCATGGCAGTCTTATCCCCAAATGGCATTTGCTTTCGACCCATGGTATTTCCATATTCCATGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS TCA 72 bp | GACATGTCCATGATTGCCTGCACGGGATTGCATACATaGGATGGTAGGATGTGTCTTGTTGGAGTCTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: DMSMIACTGLHT*DGRMCLVGVSC Trigger: ACAAGAGACTCCAACAAGACACATCCTACCATCTCATGTATGCAATCCCGTGCAGGCAATCATGGACATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS CAA 72 bp | GCCAAAATTTTAAAGAGAGCCAAGTGGCCAGGCCATTaGCTGACTAGAACTCATATACTCGGAGTTTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: AKILKRAKWPGH*LTRTHILGVSL Trigger: CAGGGAAACTCCGAGTATATGAGTTCTAGTCAGCAAATGGCCTGGCCACTTGGCTCTCTTTAAAATTTTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS TCA 72 bp | ACACCCTTTGAGTGGGCCAATAGAATACAGCAAAGGTaGTGGAATGGACGTGGTTATGTATGTGATGGACAT | + |
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Preference number: 6 (lower is better) Translates to: TPFEWANRIQQR*WNGRGYVCDGH Trigger: ATGTCCATCACATACATAACCACGTCCATTCCATCACCTTTGCTGTATTCTATTGGCCCACTCAAAGGGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS CAA 72 bp | AATATGGAAATACCATGGGTCGAAAGCAAATGCCATTaGGGGATAAGACTGCCATGCAAAGGACCTTGGACT | + |
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Preference number: 6 (lower is better) Translates to: NMEIPWVESKCH*GIRLPCKGPWT Trigger: AGTCCAAGGTCCTTTGCATGGCAGTCTTATCCCCAAATGGCATTTGCTTTCGACCCATGGTATTTCCATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS TCA 72 bp | ATGACAGGCAGGAATAGTGGCGCGGTTTGTATTTTGTaGGCTCTGTCCTTTCTACTTCAAAAAGGATTTCCA | + |
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Preference number: 6 (lower is better) Translates to: MTGRNSGAVCIL*ALSFLLQKGFP Trigger: TGGAAATCCTTTTTGAAGTAGAAAGGACAGAGCTCACAAAATACAAACCGCGCCACTATTCCTGCCTGTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS CCA 72 bp | CAGAACAGTGTATTAACAATAGCTCTGTCTACGAGTTaGCCGTTAGACACACTTATAAGGGATGCTGATGTT | + |
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Preference number: 6 (lower is better) Translates to: QNSVLTIALSTS*PLDTLIRDADV Trigger: AACATCAGCATCCCTTATAAGTGTGTCTAACGGCCAACTCGTAGACAGAGCTATTGTTAATACACTGTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS CCA 72 bp | AAACCAGGATCCTCCCTTTGTTCTCTGGAAAGTAACTaGTTTACACAGAAAGTTTGTGAACTGTTCCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: KPGSSLCSLESN*FTQKVCELFLN Trigger: ATTCAGGAACAGTTCACAAACTTTCTGTGTAAACCAGTTACTTTCCAGAGAACAAAGGGAGGATCCTGGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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| CDS TCA 72 bp | AACTTTGTCTTCCTTAATTTTCCTGTATCAACCAGATaGAGGTGTTCACAGAGGGATACTCAGAACAGTGTA | + |
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Preference number: 6 (lower is better) Translates to: NFVFLNFPVSTR*RCSQRDTQNSV Trigger: TACACTGTTCTGAGTATCCCTCTGTGAACACCTTCATCTGGTTGATACAGGAAAATTAAGGAAGACAAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370624.1 |
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