Pregenerated sensors for LINC01554 (Homo sapiens)
Ensembl gene IDs: ENSG00000236882Ensembl transcript IDs: ENST00000357880.8, ENST00000436592.5, ENST00000620167.1, ENST00000656444.1
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGTGCGCGCAGACCCACTTCCCGACTGCTCATCAACCGACCTCCCTaGGGCCGAGAGGCAAGCCGGGTCCGCGCGGGGTGCAGCGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: GARRPTSRLLINRPP*GREASRVRAGCSAT Trigger: GGTGGCGCTGCACCCCGCGCGGACCCGGCTTGCCTCTCGGCCCCAGGGAGGTCGGTTGATGAGCAGTCGGGAAGTGGGTCTGCGCGCACC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS GCA 90 bp | GTTTGCCACAGCTGCAGCGGGGTGCGCGCAGACCCACTTCCCGACTaGTCATCAACCGACCTCCCTGGGGCCGAGAGGCAAGCCGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VCHSCSGVRADPLPD*SSTDLPGAERQAGS Trigger: GGACCCGGCTTGCCTCTCGGCCCCAGGGAGGTCGGTTGATGAGCAGTCGGGAAGTGGGTCTGCGCGCACCCCGCTGCAGCTGTGGCAAAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS GCA 90 bp | CAAGCCTGTGTGTCATCGTTTGCGTTTGCCACAGCTGCAGCGGGGTaGGCGCAGACCCACTTCCCGACTGCTCATCAACCGACCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QACVSSFAFATAAAG*AQTHFPTAHQPTSL Trigger: CAGGGAGGTCGGTTGATGAGCAGTCGGGAAGTGGGTCTGCGCGCACCCCGCTGCAGCTGTGGCAAACGCAAACGATGACACACAGGCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS GCA 90 bp | AGGCCCTCGTCAAGCCTGTGTGTCATCGTTTGCGTTTGCCACAGCTaGAGCGGGGTGCGCGCAGACCCACTTCCCGACTGCTCATCAACC | + |
|
Preference number: 5 (lower is better) Translates to: RPSSSLCVIVCVCHS*SGVRADPLPDCSST Trigger: GGTTGATGAGCAGTCGGGAAGTGGGTCTGCGCGCACCCCGCTGCAGCTGTGGCAAACGCAAACGATGACACACAGGCTTGACGAGGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS GCA 90 bp | CTGGCCCACGCAAGCTACCTGGTGTACCTTCAAGTTCAGGCCAGCTaGTGTTCCTGCCCGCTCTTGGAGATGAAAAGGTTTCCCATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LAHASYLVYLQVQAS*CSCPLLEMKRFPMP Trigger: GGGCATGGGAAACCTTTTCATCTCCAAGAGCGGGCAGGAACAGCAGCTGGCCTGAACTTGAAGGTACACCAGGTAGCTTGCGTGGGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS GCA 90 bp | GCAAGCTACCTGGTGTACCTTCAAGTTCAGGCCAGCTGCTGTTCCTaGCCGCTCTTGGAGATGAAAAGGTTTCCCATGCCCCCACCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ASYLVYLQVQASCCS*PLLEMKRFPMPPPP Trigger: AGGAGGTGGGGGCATGGGAAACCTTTTCATCTCCAAGAGCGGGCAGGAACAGCAGCTGGCCTGAACTTGAAGGTACACCAGGTAGCTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS CCA 90 bp | CAGCGCCACCTGCTGGAATTCATGCGATGGAGCAGCAGCCTGAAGTaGCTGCGGAGTCCAGAAGTCCTGTCCTTGAGGTTTGCTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QRHLLEFMRWSSSLK*LRSPEVLSLRFAFR Trigger: TCTGAAAGCAAACCTCAAGGACAGGACTTCTGGACTCCGCAGCCACTTCAGGCTGCTGCTCCATCGCATGAATTCCAGCAGGTGGCGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS TCA 90 bp | GAGTTTCTTCCTTCTGGTGGGTTCGTGGTCTTGCTGGCTCAGGAGTaGAGCTGCGGGACCTTCGCGGTGAGTGTTACAGCTCTTAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EFLPSGGFVVLLAQE*SCGTFAVSVTALKV Trigger: CACCTTAAGAGCTGTAACACTCACCGCGAAGGTCCCGCAGCTTCACTCCTGAGCCAGCAAGACCACGAACCCACCAGAAGGAAGAAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357880.8 ENST00000436592.5 |
||
| CDS TCA 90 bp | AGCTGGGTGCCAGCTTGTCATGGCCTGGACTGTTGGCTCTCTCTGTaGTCCCACTGTGTCTGGAATTGGTGGGTTCTTGGTCTCACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SWVPACHGLDCWLSL*SHCVWNWWVLGLTD Trigger: GTCAGTGAGACCAAGAACCCACCAATTCCAGACACAGTGGGATCACAGAGAGAGCCAACAGTCCAGGCCATGACAAGCTGGCACCCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357880.8 ENST00000436592.5 |
||
| CDS TCA 90 bp | GACAGGGTGTCATCGTGTGCAGCTTCCGTGATGCAGTTTGATCCTTaGGCGGAAGGACCTCGGAGGCTGCGTCGTGAAGACTTTCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: DRVSSCAASVMQFDP*AEGPRRLRREDFPS Trigger: TGATGGAAAGTCTTCACGACGCAGCCTCCGAGGTCCTTCCGCTCAAGGATCAAACTGCATCACGGAAGCTGCACACGATGACACCCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656444.1 |
||
| CDS GCA 90 bp | ACGTGCATTCTGGCCAGCCAGGCAGAAGCACTTTGTTTTCCATTGTaGGGTGACGCCAGATCCCCATTGCTTCTGACAAAGGCCCTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: TCILASQAEALCFPL*GDARSPLLLTKALV Trigger: GACGAGGGCCTTTGTCAGAAGCAATGGGGATCTGGCGTCACCGCACAATGGAAAACAAAGTGCTTCTGCCTGGCTGGCCAGAATGCACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS TCA 90 bp | CACTTTGTTTTCCATTGTGCGGTGACGCCAGATCCCCATTGCTTCTaGCAAAGGCCCTCGTCAAGCCTGTGTGTCATCGTTTGCGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: HFVFHCAVTPDPHCF*QRPSSSLCVIVCVC Trigger: GCAAACGCAAACGATGACACACAGGCTTGACGAGGGCCTTTGTCAGAAGCAATGGGGATCTGGCGTCACCGCACAATGGAAAACAAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS TCA 90 bp | ATGCCCCCACCTCCTCCCGAGTTAATTCTCTCCAGGTGCTTCTCTTaGTGTAAACCCAGGGTGCTATTAGCAGGCTCCTTGTTCTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: MPPPPPELILSRCFS*CKPRVLLAGSLFSC Trigger: GCAAGAGAACAAGGAGCCTGCTAATAGCACCCTGGGTTTACATCAAGAGAAGCACCTGGAGAGAATTAACTCGGGAGGAGGTGGGGGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS GCA 90 bp | TTCCAGCCGTCTTCTCTTCCACTCCCTGACCACTCACGAGTCACCTaGATTTCTTACCCCAGTCGTCATCCTTGTTTCCATGAACGATCC | + |
|
Preference number: 5 (lower is better) Translates to: FQPSSLPLPDHSRVT*ISYPSRHPCFHERS Trigger: GGATCGTTCATGGAAACAAGGATGACGACTGGGGTAAGAAATGCAGGTGACTCGTGAGTGGTCAGGGAGTGGAAGAGAAGACGGCTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS CCA 90 bp | CTGCCTGTAAATGCCCCAGCATCAATAGTGAGCAAACGTGCATTCTaGCCAGCCAGGCAGAAGCACTTTGTTTTCCATTGTGCGGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: LPVNAPASIVSKRAF*PARQKHFVFHCAVT Trigger: CGTCACCGCACAATGGAAAACAAAGTGCTTCTGCCTGGCTGGCCAGAATGCACGTTTGCTCACTATTGATGCTGGGGCATTTACAGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS CCA 90 bp | TGGCAGCATCTTAGTGGGAGCCAAGAGTCAGATGTTCCTTCCCTGTaGGATGATGGTGTCATTGTCAGAAAGCGCCCTCCATTTCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: WQHLSGSQESDVPSL*DDGVIVRKRPPFLI Trigger: GATCAGAAATGGAGGGCGCTTTCTGACAATGACACCATCATCCCACAGGGAAGGAACATCTGACTCTTGGCTCCCACTAAGATGCTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656444.1 |
||
| CDS GCA 90 bp | ACTCATTCTGCCTGTAAATGCCCCAGCATCAATAGTGAGCAAACGTaGATTCTGGCCAGCCAGGCAGAAGCACTTTGTTTTCCATTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: THSACKCPSINSEQT*ILASQAEALCFPLC Trigger: GCACAATGGAAAACAAAGTGCTTCTGCCTGGCTGGCCAGAATGCACGTTTGCTCACTATTGATGCTGGGGCATTTACAGGCAGAATGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS GCA 90 bp | AATCCATGCTTCCTTCTTGCTTCCATAGCTTCTTCAGCATTGCCTTaGAGGAAGGAGCTACAGCCACGCCAGTTGGACAAATGTGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: NPCFLLASIASSALP*RKELQPRQLDKCEA Trigger: TGCTTCACATTTGTCCAACTGGCGTGGCTGTAGCTCCTTCCTGCAAGGCAATGCTGAAGAAGCTATGGAAGCAAGAAGGAAGCATGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436592.5 |
||
| CDS TCA 90 bp | AGTATTACAGTTCTTAAAGGCAGTGTGTCCAGAGTTTGTTCCTTCTaGTGTTCAGATGTGTTCGGAGTTTCTTCCTTCTGGTGGGTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SITVLKGSVSRVCSF*CSDVFGVSSFWWVR Trigger: ACGAACCCACCAGAAGGAAGAAACTCCGAACACATCTGAACATCAGAAGGAACAAACTCTGGACACACTGCCTTTAAGAACTGTAATACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357880.8 ENST00000436592.5 |
||
| CDS CCA 72 bp | AGACCCACTTCCCGACTGCTCATCAACCGACCTCCCTaGGGCCGAGAGGCAAGCCGGGTCCGCGCGGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RPTSRLLINRPP*GREASRVRAGC Trigger: GCACCCCGCGCGGACCCGGCTTGCCTCTCGGCCCCAGGGAGGTCGGTTGATGAGCAGTCGGGAAGTGGGTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS GCA 72 bp | AGCTGCAGCGGGGTGCGCGCAGACCCACTTCCCGACTaGTCATCAACCGACCTCCCTGGGGCCGAGAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SCSGVRADPLPD*SSTDLPGAERQ Trigger: TTGCCTCTCGGCCCCAGGGAGGTCGGTTGATGAGCAGTCGGGAAGTGGGTCTGCGCGCACCCCGCTGCAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS GCA 72 bp | GTGTCATCGTTTGCGTTTGCCACAGCTGCAGCGGGGTaGGCGCAGACCCACTTCCCGACTGCTCATCAACCG | + |
|
Preference number: 6 (lower is better) Translates to: VSSFAFATAAAG*AQTHFPTAHQP Trigger: CGGTTGATGAGCAGTCGGGAAGTGGGTCTGCGCGCACCCCGCTGCAGCTGTGGCAAACGCAAACGATGACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS GCA 72 bp | TCAAGCCTGTGTGTCATCGTTTGCGTTTGCCACAGCTaGAGCGGGGTGCGCGCAGACCCACTTCCCGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLCVIVCVCHS*SGVRADPLPDC Trigger: GCAGTCGGGAAGTGGGTCTGCGCGCACCCCGCTGCAGCTGTGGCAAACGCAAACGATGACACACAGGCTTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS GCA 72 bp | AGGCCCTCGTCAAGCCTGTGTGTCATCGTTTGCGTTTaGCACAGCTGCAGCGGGGTGCGCGCAGACCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: RPSSSLCVIVCV*HSCSGVRADPL Trigger: AAGTGGGTCTGCGCGCACCCCGCTGCAGCTGTGGCAAACGCAAACGATGACACACAGGCTTGACGAGGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS CAA 72 bp | AAGGCCCTCGTCAAGCCTGTGTGTCATCGTTTGCGTTaGCCACAGCTGCAGCGGGGTGCGCGCAGACCCACT | + |
|
Preference number: 6 (lower is better) Translates to: KALVKPVCHRLR*PQLQRGARRPT Trigger: AGTGGGTCTGCGCGCACCCCGCTGCAGCTGTGGCAAACGCAAACGATGACACACAGGCTTGACGAGGGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS CAA 90 bp | CTTCTGACAAAGGCCCTCGTCAAGCCTGTGTGTCATCGTTTGCGTTaGCCACAGCTGCAGCGGGGTGCGCGCAGACCCACTTCCCGACTG | + |
|
Preference number: 6 (lower is better) Translates to: LLTKALVKPVCHRLR*PQLQRGARRPTSRL Trigger: CAGTCGGGAAGTGGGTCTGCGCGCACCCCGCTGCAGCTGTGGCAAACGCAAACGATGACACACAGGCTTGACGAGGGCCTTTGTCAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS CAA 72 bp | CTGACAAAGGCCCTCGTCAAGCCTGTGTGTCATCGTTaGCGTTTGCCACAGCTGCAGCGGGGTGCGCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LTKALVKPVCHR*RLPQLQRGARR Trigger: TCTGCGCGCACCCCGCTGCAGCTGTGGCAAACGCAAACGATGACACACAGGCTTGACGAGGGCCTTTGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS CAA 90 bp | CCATTGCTTCTGACAAAGGCCCTCGTCAAGCCTGTGTGTCATCGTTaGCGTTTGCCACAGCTGCAGCGGGGTGCGCGCAGACCCACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PLLLTKALVKPVCHR*RLPQLQRGARRPTS Trigger: GGAAGTGGGTCTGCGCGCACCCCGCTGCAGCTGTGGCAAACGCAAACGATGACACACAGGCTTGACGAGGGCCTTTGTCAGAAGCAATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS TCA 72 bp | TTCAGGCCAGCTGCTGTTCCTGCCCGCTCTTGGAGATaGAAAGGTTTCCCATGCCCCCACCTCCTCCCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: FRPAAVPARSWR*KGFPCPHLLPS Trigger: ACTCGGGAGGAGGTGGGGGCATGGGAAACCTTTTCATCTCCAAGAGCGGGCAGGAACAGCAGCTGGCCTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS TCA 72 bp | CAGGGTGTCATCGTGTGCAGCTTCCGTGATGCAGTTTaGTCCTTGAGCGGAAGGACCTCGGAGGCTGCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: QGVIVCSFRDAV*SLSGRTSEAAS Trigger: CGACGCAGCCTCCGAGGTCCTTCCGCTCAAGGATCAAACTGCATCACGGAAGCTGCACACGATGACACCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656444.1 |
||
| CDS GCA 72 bp | GTTCGGAGTTTCTTCCTTCTGGTGGGTTCGTGGTCTTaGTGGCTCAGGAGTGAAGCTGCGGGACCTTCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: VRSFFLLVGSWS*WLRSEAAGPSR Trigger: CCGCGAAGGTCCCGCAGCTTCACTCCTGAGCCAGCAAGACCACGAACCCACCAGAAGGAAGAAACTCCGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357880.8 ENST00000436592.5 |
||
| CDS TCA 72 bp | CAGGAAGGAGCTACAGCCACGCCAGTTGGACAAATGTaGAGCAGAGCTGGGTGCCAGCTTGTCATGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QEGATATPVGQM*SRAGCQLVMAW Trigger: CCAGGCCATGACAAGCTGGCACCCAGCTCTGCTTCACATTTGTCCAACTGGCGTGGCTGTAGCTCCTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436592.5 |
||
| CDS CCA 72 bp | CTGGAGTTGTTCGTTCCTCCCGGTGGGTTCGTAGTCTaGCTGGCTTCAGGAGTGAAGCTGCAGACCTTCGCA | + |
|
Preference number: 6 (lower is better) Translates to: LELFVPPGGFVV*LASGVKLQTFA Trigger: TGCGAAGGTCTGCAGCTTCACTCCTGAAGCCAGCCAGACTACGAACCCACCGGGAGGAACGAACAACTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357880.8 ENST00000436592.5 |
||
| CDS CAA 72 bp | GGAGGCTGCGTCGTGAAGACTTTCCATCAGGGGCTGTaGTTTTGCCCTTTGAGACCAGCCGCTCTGGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GGCVVKTFHQGL*FCPLRPAALAA Trigger: TGCTGCCAGAGCGGCTGGTCTCAAAGGGCAAAACAACAGCCCCTGATGGAAAGTCTTCACGACGCAGCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656444.1 |
||
| CDS CAA 90 bp | CTGGTGTACCTTCAAGTTCAGGCCAGCTGCTGTTCCTGCCCGCTCTaGGAGATGAAAAGGTTTCCCATGCCCCCACCTCCTCCCGAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: LVYLQVQASCCSCPL*EMKRFPMPPPPPEL Trigger: TAACTCGGGAGGAGGTGGGGGCATGGGAAACCTTTTCATCTCCAAGAGCGGGCAGGAACAGCAGCTGGCCTGAACTTGAAGGTACACCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS CAA 90 bp | CAGCCACGCCAGTTGGACAAATGTGAAGCAGAGCTGGGTGCCAGCTaGTCATGGCCTGGACTGTTGGCTCTCTCTGTGATCCCACTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: QPRQLDKCEAELGAS*SWPGLLALSVIPLC Trigger: ACACAGTGGGATCACAGAGAGAGCCAACAGTCCAGGCCATGACAAGCTGGCACCCAGCTCTGCTTCACATTTGTCCAACTGGCGTGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436592.5 |
||
| CDS TCA 72 bp | TCATCGTGTGCAGCTTCCGTGATGCAGTTTGATCCTTaGGCGGAAGGACCTCGGAGGCTGCGTCGTGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SSCAASVMQFDP*AEGPRRLRRED Trigger: GTCTTCACGACGCAGCCTCCGAGGTCCTTCCGCTCAAGGATCAAACTGCATCACGGAAGCTGCACACGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656444.1 |
||
| CDS CAA 72 bp | CTTCAAGTTCAGGCCAGCTGCTGTTCCTGCCCGCTCTaGGAGATGAAAAGGTTTCCCATGCCCCCACCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LQVQASCCSCPL*EMKRFPMPPPP Trigger: AGGAGGTGGGGGCATGGGAAACCTTTTCATCTCCAAGAGCGGGCAGGAACAGCAGCTGGCCTGAACTTGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS CAA 72 bp | GCATTGCCTTGCAGGAAGGAGCTACAGCCACGCCAGTaGGACAAATGTGAAGCAGAGCTGGGTGCCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ALPCRKELQPRQ*DKCEAELGASL Trigger: CAAGCTGGCACCCAGCTCTGCTTCACATTTGTCCAACTGGCGTGGCTGTAGCTCCTTCCTGCAAGGCAATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436592.5 |
||
| CDS CAA 90 bp | GTTGGCTCTCTCTGTGATCCCACTGTGTCTGGAATTGGTGGGTTCTaGGTCTCACTGACTTCAAGAATGAAGCCGCGGGCCCTCACGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VGSLCDPTVSGIGGF*VSLTSRMKPRALTV Trigger: CACCGTGAGGGCCCGCGGCTTCATTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCCAGACACAGTGGGATCACAGAGAGAGCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357880.8 ENST00000436592.5 |
||
| CDS CCA 72 bp | AGATGTGTTCGGAGTTTCTTCCTTCTGGTGGGTTCGTaGTCTTGCTGGCTCAGGAGTGAAGCTGCGGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: RCVRSFFLLVGS*SCWLRSEAAGP Trigger: AGGTCCCGCAGCTTCACTCCTGAGCCAGCAAGACCACGAACCCACCAGAAGGAAGAAACTCCGAACACATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357880.8 ENST00000436592.5 |
||
| CDS CCA 72 bp | GCTTCCGTGATGCAGTTTGATCATGTGAAGCAGAGCTaGGTGCCAGCTTGTCATGGCCTGGACTGTTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ASVMQFDHVKQS*VPACHGLDCWL Trigger: GAGCCAACAGTCCAGGCCATGACAAGCTGGCACCCAGCTCTGCTTCACATGATCAAACTGCATCACGGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357880.8 |
||
| CDS CCA 72 bp | CTGCTGGAATTCATGCGATGGAGCAGCAGCCTGAAGTaGCTGCGGAGTCCAGAAGTCCTGTCCTTGAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LLEFMRWSSSLK*LRSPEVLSLRF Trigger: AAACCTCAAGGACAGGACTTCTGGACTCCGCAGCCACTTCAGGCTGCTGCTCCATCGCATGAATTCCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS CCA 72 bp | GACAAATGTGAAGCAGAGCTGGGTGCCAGCTTGTCATaGCCTGGACTGTTGGCTCTCTCTGTGATCCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: DKCEAELGASLS*PGLLALSVIPL Trigger: CAGTGGGATCACAGAGAGAGCCAACAGTCCAGGCCATGACAAGCTGGCACCCAGCTCTGCTTCACATTTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436592.5 |
||
| CDS CCA 72 bp | CATTGCCTTGCAGGAAGGAGCTACAGCCACGCCAGTTaGACAAATGTGAAGCAGAGCTGGGTGCCAGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: HCLAGRSYSHAS*TNVKQSWVPAC Trigger: ACAAGCTGGCACCCAGCTCTGCTTCACATTTGTCCAACTGGCGTGGCTGTAGCTCCTTCCTGCAAGGCAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436592.5 |
||
| CDS CAA 90 bp | TCATGTGAAGCAGAGCTGGGTGCCAGCTTGTCATGGCCTGGACTGTaGGCTCTCTCTGTGATCCCACTGTGTCTGGAATTGGTGGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SCEAELGASLSWPGL*ALSVIPLCLELVGS Trigger: AGAACCCACCAATTCCAGACACAGTGGGATCACAGAGAGAGCCAACAGTCCAGGCCATGACAAGCTGGCACCCAGCTCTGCTTCACATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357880.8 |
||
| CDS CAA 90 bp | TGGAGCAGCAGCCTGAAGTGGCTGCGGAGTCCAGAAGTCCTGTCCTaGAGGTTTGCTTTCAGACAACGGCCAGTCCTGAATGAGAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: WSSSLKWLRSPEVLS*RFAFRQRPVLNEKW Trigger: CCATTTCTCATTCAGGACTGGCCGTTGTCTGAAAGCAAACCTCAAGGACAGGACTTCTGGACTCCGCAGCCACTTCAGGCTGCTGCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS CAA 90 bp | CAAACGTGCATTCTGGCCAGCCAGGCAGAAGCACTTTGTTTTCCATaGTGCGGTGACGCCAGATCCCCATTGCTTCTGACAAAGGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QTCILASQAEALCFP*CGDARSPLLLTKAL Trigger: GAGGGCCTTTGTCAGAAGCAATGGGGATCTGGCGTCACCGCACAATGGAAAACAAAGTGCTTCTGCCTGGCTGGCCAGAATGCACGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS TCA 72 bp | CCAGCTTGTCATGGCCTGGACTGTTGGCTCTCTCTGTaGTCCCACTGTGTCTGGAATTGGTGGGTTCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PACHGLDCWLSL*SHCVWNWWVLG Trigger: ACCAAGAACCCACCAATTCCAGACACAGTGGGATCACAGAGAGAGCCAACAGTCCAGGCCATGACAAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357880.8 ENST00000436592.5 |
||
| CDS TCA 72 bp | TTCCATTGTGCGGTGACGCCAGATCCCCATTGCTTCTaGCAAAGGCCCTCGTCAAGCCTGTGTGTCATCGTT | + |
|
Preference number: 6 (lower is better) Translates to: FHCAVTPDPHCF*QRPSSSLCVIV Trigger: AACGATGACACACAGGCTTGACGAGGGCCTTTGTCAGAAGCAATGGGGATCTGGCGTCACCGCACAATGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS GCA 72 bp | CTGGCCAGCCAGGCAGAAGCACTTTGTTTTCCATTGTaGGGTGACGCCAGATCCCCATTGCTTCTGACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LASQAEALCFPL*GDARSPLLLTK Trigger: CTTTGTCAGAAGCAATGGGGATCTGGCGTCACCGCACAATGGAAAACAAAGTGCTTCTGCCTGGCTGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS CCA 72 bp | AAGAGAATCACCTTCTCCTGGCCCACGCAAGCTACCTaGTGTACCTTCAAGTTCAGGCCAGCTGCTGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: KRITFSWPTQAT*CTFKFRPAAVP Trigger: AGGAACAGCAGCTGGCCTGAACTTGAAGGTACACCAGGTAGCTTGCGTGGGCCAGGAGAAGGTGATTCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS CAA 72 bp | CTCTGTGATCCCACTGTGTCTGGAATTGGTGGGTTCTaGGTCTCACTGACTTCAAGAATGAAGCCGCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LCDPTVSGIGGF*VSLTSRMKPRA Trigger: GGCCCGCGGCTTCATTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCCAGACACAGTGGGATCACAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357880.8 ENST00000436592.5 |
||
| CDS CAA 72 bp | CAGTTGGACAAATGTGAAGCAGAGCTGGGTGCCAGCTaGTCATGGCCTGGACTGTTGGCTCTCTCTGTGATC | + |
|
Preference number: 6 (lower is better) Translates to: QLDKCEAELGAS*SWPGLLALSVI Trigger: GATCACAGAGAGAGCCAACAGTCCAGGCCATGACAAGCTGGCACCCAGCTCTGCTTCACATTTGTCCAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436592.5 |
||
| CDS CAA 90 bp | AAATGTGAAGCAGAGCTGGGTGCCAGCTTGTCATGGCCTGGACTGTaGGCTCTCTCTGTGATCCCACTGTGTCTGGAATTGGTGGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: KCEAELGASLSWPGL*ALSVIPLCLELVGS Trigger: AGAACCCACCAATTCCAGACACAGTGGGATCACAGAGAGAGCCAACAGTCCAGGCCATGACAAGCTGGCACCCAGCTCTGCTTCACATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436592.5 |
||
| CDS GCA 72 bp | GCAAGCTACCTGGTGTACCTTCAAGTTCAGGCCAGCTaGTGTTCCTGCCCGCTCTTGGAGATGAAAAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: ASYLVYLQVQAS*CSCPLLEMKRF Trigger: AAACCTTTTCATCTCCAAGAGCGGGCAGGAACAGCAGCTGGCCTGAACTTGAAGGTACACCAGGTAGCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS CAA 72 bp | CTTTGTTTTCCATTGTGCGGTGACGCCAGATCCCCATaGCTTCTGACAAAGGCCCTCGTCAAGCCTGTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LCFPLCGDARSP*LLTKALVKPVC Trigger: ACACACAGGCTTGACGAGGGCCTTTGTCAGAAGCAATGGGGATCTGGCGTCACCGCACAATGGAAAACAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS CAA 90 bp | GCAGAAGCACTTTGTTTTCCATTGTGCGGTGACGCCAGATCCCCATaGCTTCTGACAAAGGCCCTCGTCAAGCCTGTGTGTCATCGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: AEALCFPLCGDARSP*LLTKALVKPVCHRL Trigger: CAAACGATGACACACAGGCTTGACGAGGGCCTTTGTCAGAAGCAATGGGGATCTGGCGTCACCGCACAATGGAAAACAAAGTGCTTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS TCA 72 bp | CCTCCTCCCGAGTTAATTCTCTCCAGGTGCTTCTCTTaGTGTAAACCCAGGGTGCTATTAGCAGGCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PPPELILSRCFS*CKPRVLLAGSL Trigger: CAAGGAGCCTGCTAATAGCACCCTGGGTTTACATCAAGAGAAGCACCTGGAGAGAATTAACTCGGGAGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS TCA 72 bp | TGGGAGCCAAGAGTCAGATGTTCCTTCCCTGTGGGATaGTGGTGTCATTGTCAGAAAGCGCCCTCCATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: WEPRVRCSFPVG*WCHCQKAPSIS Trigger: AGAAATGGAGGGCGCTTTCTGACAATGACACCATCATCCCACAGGGAAGGAACATCTGACTCTTGGCTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656444.1 |
||
| CDS TCA 72 bp | CTGCATTTCTTACCCCAGTCGTCATCCTTGTTTCCATaGACGATCCTCTCCAGGGCTTCCTGCCAGAAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: LHFLPQSSSLFP*TILSRASCQKS Trigger: ACTTTTCTGGCAGGAAGCCCTGGAGAGGATCGTTCATGGAAACAAGGATGACGACTGGGGTAAGAAATGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS GCA 72 bp | GCCTGTAAATGCCCCAGCATCAATAGTGAGCAAACGTaGATTCTGGCCAGCCAGGCAGAAGCACTTTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: ACKCPSINSEQT*ILASQAEALCF Trigger: AAAACAAAGTGCTTCTGCCTGGCTGGCCAGAATGCACGTTTGCTCACTATTGATGCTGGGGCATTTACAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS CCA 72 bp | GGCAAAGGGATATTCTGCTTGCAGTCTTTTGCCCTCTaGCAAAAACTTTCCAGACAGGGTGTCATCGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GKGIFCLQSFAL*QKLSRQGVIVC Trigger: GCACACGATGACACCCTGTCTGGAAAGTTTTTGCCAGAGGGCAAAAGACTGCAAGCAGAATATCCCTTTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS TCA 72 bp | CAGGGTGTCATCGTGTGCAGCTTCCGTGATGCAGTTTaGTCCTTTAGCTTTAGGAAGAAGAGCAATAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: QGVIVCSFRDAV*SFSFRKKSNRG Trigger: ACCCCTATTGCTCTTCTTCCTAAAGCTAAAGGATCAAACTGCATCACGGAAGCTGCACACGATGACACCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436592.5 |
||
| CDS GCA 72 bp | AAACCCAGGGTGCTATTAGCAGGCTCCTTGTTCTCTTaGTCAAATCCTTTCCAACCTTTCCAACCTGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: KPRVLLAGSLFS*SNPFQPFQPVE Trigger: CTCCACAGGTTGGAAAGGTTGGAAAGGATTTGAGCAAGAGAACAAGGAGCCTGCTAATAGCACCCTGGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS GCA 72 bp | GAGAAATGGCAAAGGGATATTCTGCTTGCAGTCTTTTaGCCTCTGGCAAAAACTTTCCAGACAGGGTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: EKWQRDILLAVF*PLAKTFQTGCH Trigger: ATGACACCCTGTCTGGAAAGTTTTTGCCAGAGGGCAAAAGACTGCAAGCAGAATATCCCTTTGCCATTTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS CCA 72 bp | AAAATTCCAAGGGGACCAGTTAGCCACAACAAAGAATaGGGTTCAGGGAACTTCTTAGGGATGTATCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: KIPRGPVSHNKE*GSGNFLGMYLP Trigger: GGGAAGATACATCCCTAAGAAGTTCCCTGAACCCCATTCTTTGTTGTGGCTAACTGGTCCCCTTGGAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000357880.8 ENST00000436592.5 ENST00000620167.1 ENST00000656444.1 |
||
| CDS TCA 72 bp | GTTCTTAAAGGCAGTGTGTCCAGAGTTTGTTCCTTCTaGTGTTCAGATGTGTTCGGAGTTTCTTCCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VLKGSVSRVCSF*CSDVFGVSSFW Trigger: CCAGAAGGAAGAAACTCCGAACACATCTGAACATCAGAAGGAACAAACTCTGGACACACTGCCTTTAAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000357880.8 ENST00000436592.5 |
||
| CDS GCA 72 bp | GTTTGTTGTCAGTTTTTAGAATCCATGCTTCCTTCTTaGTTCCATAGCTTCTTCAGCATTGCCTTGCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VCCQFLESMLPS*FHSFFSIALQE Trigger: TTCCTGCAAGGCAATGCTGAAGAAGCTATGGAAGCAAGAAGGAAGCATGGATTCTAAAAACTGACAACAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436592.5 |
||