Pregenerated sensors for LINC01551 (Homo sapiens)
Ensembl gene IDs: ENSG00000186960Ensembl transcript IDs: ENST00000399387.9, ENST00000548213.2, ENST00000550266.1, ENST00000552957.5, ENST00000622740.3, ENST00000653638.1, ENST00000661288.1, ENST00000668749.1, ENST00000671672.1, ENST00000675861.1
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGGGAGGGGAAGAGTCACGGCCCGCGAGGGTTGGAGACCGGAAGTaGAGGTTCTCCCGTGCGCGGGAGAATGTCGCTGGGCAGGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GGGEESRPARVGDRK*RFSRARENVAGQGV Trigger: CACGCCCTGCCCAGCGACATTCTCCCGCGCACGGGAGAACCTGCACTTCCGGTCTCCAACCCTCGCGGGCCGTGACTCTTCCCCTCCCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS CCA 90 bp | GCGGACGCGATCGCAGAAAGCGGTCACTCGGGGGCACCGGAGCTCTaGCGGGGGACCGAAAGTGTGTCTGTTGGAGTGGTTGGCAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ADAIAESGHSGAPEL*RGTESVSVGVVGSG Trigger: GCCACTGCCAACCACTCCAACAGACACACTTTCGGTCCCCCGCCAGAGCTCCGGTGCCCCCGAGTGACCGCTTTCTGCGATCGCGTCCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS TCA 90 bp | CGGGTGCTGCTGCGGCGGCCGGGGCCGCTCAGTAGTGGGCGCCTCTaGTGGCCTTCCGAAATGAGAGGTGCCCAGAGAGAAAACAGTACC | + |
|
Preference number: 5 (lower is better) Translates to: RVLLRRPGPLSSGRL*WPSEMRGAQRENST Trigger: GGTACTGTTTTCTCTCTGGGCACCTCTCATTTCGGAAGGCCATCAGAGGCGCCCACTACTGAGCGGCCCCGGCCGCCGCAGCAGCACCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000675861.1 |
||
| CDS GCA 90 bp | GTCACGGCCCGCGAGGGTTGGAGACCGGAAGTGCAGGTTCTCCCGTaGGCGGGAGAATGTCGCTGGGCAGGGCGTGACTCTAAACTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VTAREGWRPEVQVLP*AGECRWAGRDSKLK Trigger: CTTGAGTTTAGAGTCACGCCCTGCCCAGCGACATTCTCCCGCGCACGGGAGAACCTGCACTTCCGGTCTCCAACCCTCGCGGGCCGTGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS GCA 90 bp | CTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTaGCTCAGCCGGATAGGCAGAGGTTGCAGTGAGCTGAGATCACGC | + |
|
Preference number: 5 (lower is better) Translates to: LGSLQAPLPGFTPFS*LSRIGRGCSELRSR Trigger: GCGTGATCTCAGCTCACTGCAACCTCTGCCTATCCGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550266.1 |
||
| CDS CCA 90 bp | TGGAGACCGGAAGTGCAGGTTCTCCCGTGCGCGGGAGAATGTCGCTaGGCAGGGCGTGACTCTAAACTCAAGCCGCACGAGGCTTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: WRPEVQVLPCAGECR*AGRDSKLKPHEASQ Trigger: CTGAGAAGCCTCGTGCGGCTTGAGTTTAGAGTCACGCCCTGCCCAGCGACATTCTCCCGCGCACGGGAGAACCTGCACTTCCGGTCTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS CCA 90 bp | GGGCACCGGAGCTCTGGCGGGGGACCGAAAGTGTGTCTGTTGGAGTaGTTGGCAGTGGCGTTTATTGAAAGAGGGGCGCATTATTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GHRSSGGGPKVCLLE*LAVAFIERGAHYSP Trigger: GGGAGAATAATGCGCCCCTCTTTCAATAAACGCCACTGCCAACCACTCCAACAGACACACTTTCGGTCCCCCGCCAGAGCTCCGGTGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS TCA 90 bp | GCTACGTTAACTTCAAGGGCTTCTGTCTGCAGCCACCCGCGGGACTaGGCGGCTCCACCTCTTACAGCGCTGACGCTAAGGATAAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: ATLTSRASVCSHPRD*AAPPLTALTLRISS Trigger: ACTACTTATCCTTAGCGTCAGCGCTGTAAGAGGTGGAGCCGCTCAGTCCCGCGGGTGGCTGCAGACAGAAGCCCTTGAAGTTAACGTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552957.5 |
||
| CDS TCA 90 bp | CTGGAAGATAGAGAAAACAGCTCCCAACGCTATCCATCATCCATGTaGCTGGGCGGAAGTGCAGGAGAGCAAGGGGGCCGGAAATGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LEDRENSSQRYPSSM*LGGSAGEQGGRKCR Trigger: CCTGCATTTCCGGCCCCCTTGCTCTCCTGCACTTCCGCCCAGTCACATGGATGATGGATAGCGTTGGGAGCTGTTTTCTCTATCTTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS TCA 90 bp | GGCCGGGGCCGCTCAGTAGTGGGCGCCTCTGATGGCCTTCCGAAATaGGAGGTGCCCAGAGAGAAAACAGTACCAAACAATCTCGAAATA | + |
|
Preference number: 5 (lower is better) Translates to: GRGRSVVGASDGLPK*EVPREKTVPNNLEI Trigger: TATTTCGAGATTGTTTGGTACTGTTTTCTCTCTGGGCACCTCTCATTTCGGAAGGCCATCAGAGGCGCCCACTACTGAGCGGCCCCGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000675861.1 |
||
| CDS GCA 90 bp | CCTCAGGCAGAGCCCTGCTTGTTGGAATGGCTGCGCAGATTTTCATaGTGGAGAGTTCCATCTGTCTGGCAGAAGTCGATTCCTGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PQAEPCLLEWLRRFS*WRVPSVWQKSIPEA Trigger: GGCCTCAGGAATCGACTTCTGCCAGACAGATGGAACTCTCCAGCATGAAAATCTGCGCAGCCATTCCAACAAGCAGGGCTCTGCCTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000675861.1 |
||
| CDS TCA 90 bp | GTTCACGCCATTCTCCTGCCTCAGCCGGATAGGCAGAGGTTGCAGTaGGCTGAGATCACGCCACTGAATTCCAGCCTGGAAGATAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VHAILLPQPDRQRLQ*AEITPLNSSLEDRE Trigger: TTCTCTATCTTCCAGGCTGGAATTCAGTGGCGTGATCTCAGCTCACTGCAACCTCTGCCTATCCGGCTGAGGCAGGAGAATGGCGTGAAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550266.1 |
||
| CDS GCA 90 bp | CCTCAGGCAGAGCCCTGCTTGTTGGAATGGCTGCGCAGATTTTCATaGTGGAGAGTTCCATCTGTCTGGCAGAAGCTGAAGTGGTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PQAEPCLLEWLRRFS*WRVPSVWQKLKWCW Trigger: CCAACACCACTTCAGCTTCTGCCAGACAGATGGAACTCTCCAGCATGAAAATCTGCGCAGCCATTCCAACAAGCAGGGCTCTGCCTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000399387.9 ENST00000622740.3 ENST00000668749.1 |
||
| CDS TCA 90 bp | TCTGTCTGGCAGAAGCTGAAGTGGTGTTGGGGGCAGGTTATCTGGTaGAGTAGGAATGTACAGGAACCCCGCCCTCTAGGCACAGTTACA | + |
|
Preference number: 5 (lower is better) Translates to: SVWQKLKWCWGQVIW*SRNVQEPRPLGTVT Trigger: TGTAACTGTGCCTAGAGGGCGGGGTTCCTGTACATTCCTACTTCACCAGATAACCTGCCCCCAACACCACTTCAGCTTCTGCCAGACAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000399387.9 ENST00000622740.3 ENST00000668749.1 |
||
| CDS CCA 90 bp | TGTCGTTTTCTCCTCGCCGCTCCAGCCTCAGCTTCTAATCCGAATTaGAAGCGGGTAGCTGCGAGCGATCACCCTGGAAATATTTTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: CRFLLAAPASASNPN*KRVAASDHPGNIFV Trigger: AACGAAAATATTTCCAGGGTGATCGCTCGCAGCTACCCGCTTCCAATTCGGATTAGAAGCTGAGGCTGGAGCGGCGAGGAGAAAACGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000675861.1 |
||
| CDS TCA 90 bp | TGCGCAGATTTTCATGCTGGAGAGTTCCATCTGTCTGGCAGAAGCTaGAGTGGTGTTGGGGGCAGGTTATCTGGTGAAGTAGGAATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: CADFHAGEFHLSGRS*SGVGGRLSGEVGMY Trigger: GTACATTCCTACTTCACCAGATAACCTGCCCCCAACACCACTTCAGCTTCTGCCAGACAGATGGAACTCTCCAGCATGAAAATCTGCGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000399387.9 ENST00000622740.3 ENST00000668749.1 |
||
| CDS CCA 90 bp | TCCGATGCTCTGGAATCTCAATCTCGACAGAATGCCAAGAATGCTTaGTCCTACAAGGACCACGTCGTCGCTACGTTAACTTCAAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SDALESQSRQNAKNA*SYKDHVVATLTSRA Trigger: AGCCCTTGAAGTTAACGTAGCGACGACGTGGTCCTTGTAGGACCAAGCATTCTTGGCATTCTGTCGAGATTGAGATTCCAGAGCATCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552957.5 |
||
| CDS CCA 90 bp | TTCACGACCTGTCGAGTGTTTTCGGGTTCATTCACAGGAAAGGCTTaGAACGAGGGACAGCAATTCAAGTCAACACTGTCCACTACCCCT | + |
|
Preference number: 5 (lower is better) Translates to: FTTCRVFSGSFTGKA*NEGQQFKSTLSTTP Trigger: AGGGGTAGTGGACAGTGTTGACTTGAATTGCTGTCCCTCGTTCCAAGCCTTTCCTGTGAATGAACCCGAAAACACTCGACAGGTCGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552957.5 |
||
| CDS CCA 90 bp | GTGGGTGAGTACGCCTTAGCTATAAGTCCCGTTCATCCGATGCTCTaGAATCTCAATCTCGACAGAATGCCAAGAATGCTTGGTCCTACA | + |
|
Preference number: 5 (lower is better) Translates to: VGEYALAISPVHPML*NLNLDRMPRMLGPT Trigger: TGTAGGACCAAGCATTCTTGGCATTCTGTCGAGATTGAGATTCCAGAGCATCGGATGAACGGGACTTATAGCTAAGGCGTACTCACCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552957.5 |
||
| CDS GCA 90 bp | TTCATCCGATGCTCTGGAATCTCAATCTCGACAGAATGCCAAGAATaGTTGGTCCTACAAGGACCACGTCGTCGCTACGTTAACTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FIRCSGISISTECQE*LVLQGPRRRYVNFK Trigger: CTTGAAGTTAACGTAGCGACGACGTGGTCCTTGTAGGACCAAGCATTCTTGGCATTCTGTCGAGATTGAGATTCCAGAGCATCGGATGAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552957.5 |
||
| CDS CCA 90 bp | AGTGCAGACACTGGCCTAGGCCCTGGAGGCCTAAATCTCAGTTACTaGTATGAATTTGTACAGGGAATTCAGAAAGGGGTAAGTGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SADTGLGPGGLNLSY*YEFVQGIQKGVSDL Trigger: CAGATCACTTACCCCTTTCTGAATTCCCTGTACAAATTCATACCAGTAACTGAGATTTAGGCCTCCAGGGCCTAGGCCAGTGTCTGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS GCA 90 bp | CATTTATCCAGTAATTCTTTCAACATGTATTGCGTGCCTACTAAGTaGAGACACTGGCCTAGGCCCTGGAGGCCTAAATCTCAGTTACTG | + |
|
Preference number: 5 (lower is better) Translates to: HLSSNSFNMYCVPTK*RHWPRPWRPKSQLL Trigger: CAGTAACTGAGATTTAGGCCTCCAGGGCCTAGGCCAGTGTCTGCACTTAGTAGGCACGCAATACATGTTGAAAGAATTACTGGATAAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS GCA 90 bp | AGACAGAATATCATTTATCCAGTAATTCTTTCAACATGTATTGCGTaGCTACTAAGTGCAGACACTGGCCTAGGCCCTGGAGGCCTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RQNIIYPVILSTCIA*LLSADTGLGPGGLN Trigger: ATTTAGGCCTCCAGGGCCTAGGCCAGTGTCTGCACTTAGTAGGCACGCAATACATGTTGAAAGAATTACTGGATAAATGATATTCTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS GCA 90 bp | CTTTCTGACACTACAAGGTTCTCTCAGTTCATCTTGTATGTTTTCTaGTTCAGTCCTAGAATCAGGCGTTTCTTTAAGAGGCCCTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSDTTRFSQFILYVF*FSPRIRRFFKRPYF Trigger: GAAGTAGGGCCTCTTAAAGAAACGCCTGATTCTAGGACTGAAGCAGAAAACATACAAGATGAACTGAGAGAACCTTGTAGTGTCAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTCTTGAGCACTTTCTTACTTTCTaGCACTACAAGGTTCTCTCAGTTCATCTTGTATGTTTTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCLEHFLTF*HYKVLSVHLVCFLL Trigger: AAGCAGAAAACATACAAGATGAACTGAGAGAACCTTGTAGTGTCAGAAAGTAAGAAAGTGCTCAAGACACACACACACACACACACACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS CCA 90 bp | CAGTTTGGAGCAGTACTGGTCAGGTATTTTGTCAATGTCGCCCTTTaGGGATTTGCTTTATGTTTTTCTTACAATTGTACTGGAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: QFGAVLVRYFVNVAL*GFALCFSYNCTGIM Trigger: CATGATTCCAGTACAATTGTAAGAAAAACATAAAGCAAATCCCCAAAGGGCGACATTGACAAAATACCTGACCAGTACTGCTCCAAACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS TCA 90 bp | ATTGTAAATAATGCTGCAACGAACATGGGAGTGCAGGTAGCTTTTTaGGATACTGATTTCATTTTCTCTGGACATACACTCAGTAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: IVNNAATNMGVQVAF*DTDFIFSGHTLSSE Trigger: CTCACTACTGAGTGTATGTCCAGAGAAAATGAAATCAGTATCTCAAAAAGCTACCTGCACTCCCATGTTCGTTGCAGCATTATTTACAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS TCA 90 bp | GCACAATACATTAGATCCCTTTTATTACTGAGAGTTTGTACCCTTTaGCCAACATCATCGCTTTTTCCACCTCTGACCCAAACAAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: AQYIRSLLLLRVCTL*PTSSLFPPLTQTNS Trigger: AGAATTTGTTTGGGTCAGAGGTGGAAAAAGCGATGATGTTGGTCAAAGGGTACAAACTCTCAGTAATAAAAGGGATCTAATGTATTGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS CCA 90 bp | TCATCCCATTGGTTGTTTCATTTGCTGTTCGAAAGCTTTTTAATTTaGTGTAATCTCACCTGTCTATTTTTGCCTTTCTCGCGTGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSHWLFHLLFESFLI*CNLTCLFLPFSRVL Trigger: AAGCACACGCGAGAAAGGCAAAAATAGACAGGTGAGATTACACCAAATTAAAAAGCTTTCGAACAGCAAATGAAACAACCAATGGGATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS TCA 90 bp | CTTCCTGGATCCAGCTACTTTTCTTTGAGTTGGAGAACTCATACTTaGAAATCTCTGATTGACAACAGCACACTGATGAGTAGATATTAT | + |
|
Preference number: 5 (lower is better) Translates to: LPGSSYFSLSWRTHT*KSLIDNSTLMSRYY Trigger: ATAATATCTACTCATCAGTGTGCTGTTGTCAATCAGAGATTTTCAAGTATGAGTTCTCCAACTCAAAGAAAAGTAGCTGGATCCAGGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000399387.9 ENST00000653638.1 ENST00000661288.1 ENST00000668749.1 ENST00000671672.1 ENST00000675861.1 |
||
| CDS TCA 90 bp | TCAACTTTTCAACTAAATTCAGCCAAAAACAGAAGTCACCTGATTTaGAGATACCCATTAACCCTAGGCATGATATGCCTAAAGACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: STFQLNSAKNRSHLI*RYPLTLGMICLKTE Trigger: TTCTGTCTTTAGGCATATCATGCCTAGGGTTAATGGGTATCTTCAAATCAGGTGACTTCTGTTTTTGGCTGAATTTAGTTGAAAAGTTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS CCA 90 bp | TATTATCAACATGAGTTGTCCCTGTTAATGTTAATCTTGATCACTTaGCTGTTTGTCAGGTTTCTTGGCTATAAAGTTACTCTTTTACCC | + |
|
Preference number: 5 (lower is better) Translates to: YYQHELSLLMLILIT*LFVRFLGYKVTLLP Trigger: GGGTAAAAGAGTAACTTTATAGCCAAGAAACCTGACAAACAGCCAAGTGATCAAGATTAACATTAACAGGGACAACTCATGTTGATAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS TCA 72 bp | CTGCGGCGGCCGGGGCCGCTCAGTAGTGGGCGCCTCTaGTGGCCTTCCGAAATGAGAGGTGCCCAGAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LRRPGPLSSGRL*WPSEMRGAQRE Trigger: TTCTCTCTGGGCACCTCTCATTTCGGAAGGCCATCAGAGGCGCCCACTACTGAGCGGCCCCGGCCGCCGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000675861.1 |
||
| CDS GCA 72 bp | CGCGAGGGTTGGAGACCGGAAGTGCAGGTTCTCCCGTaGGCGGGAGAATGTCGCTGGGCAGGGCGTGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: REGWRPEVQVLP*AGECRWAGRDS Trigger: AGAGTCACGCCCTGCCCAGCGACATTCTCCCGCGCACGGGAGAACCTGCACTTCCGGTCTCCAACCCTCGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS GCA 72 bp | GAAGAGTCACGGCCCGCGAGGGTTGGAGACCGGAAGTaGAGGTTCTCCCGTGCGCGGGAGAATGTCGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: EESRPARVGDRK*RFSRARENVAG Trigger: CCCAGCGACATTCTCCCGCGCACGGGAGAACCTGCACTTCCGGTCTCCAACCCTCGCGGGCCGTGACTCTTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS TCA 72 bp | TTCTCTCCTGCTCCAGAGCGTCGCTCACGCGCGGGGTaGCTCGATGTCGTTTTCTCCTCGCCGCTCCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: FSPAPERRSRAG*LDVVFSSPLQP Trigger: AGGCTGGAGCGGCGAGGAGAAAACGACATCGAGTCACCCCGCGCGTGAGCGACGCTCTGGAGCAGGAGAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000675861.1 |
||
| CDS TCA 72 bp | ACTTCAAGGGCTTCTGTCTGCAGCCACCCGCGGGACTaGGCGGCTCCACCTCTTACAGCGCTGACGCTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: TSRASVCSHPRD*AAPPLTALTLR Trigger: CCTTAGCGTCAGCGCTGTAAGAGGTGGAGCCGCTCAGTCCCGCGGGTGGCTGCAGACAGAAGCCCTTGAAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552957.5 |
||
| CDS GCA 72 bp | CTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTaGCTCAGCCGGATAGGCAGAGGTTGCAGTGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LQAPLPGFTPFS*LSRIGRGCSEL Trigger: CAGCTCACTGCAACCTCTGCCTATCCGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550266.1 |
||
| CDS CCA 72 bp | ATCGCAGAAAGCGGTCACTCGGGGGCACCGGAGCTCTaGCGGGGGACCGAAAGTGTGTCTGTTGGAGTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: IAESGHSGAPEL*RGTESVSVGVV Trigger: AACCACTCCAACAGACACACTTTCGGTCCCCCGCCAGAGCTCCGGTGCCCCCGAGTGACCGCTTTCTGCGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS CCA 72 bp | GAAGTGCAGGTTCTCCCGTGCGCGGGAGAATGTCGCTaGGCAGGGCGTGACTCTAAACTCAAGCCGCACGAG | + |
|
Preference number: 6 (lower is better) Translates to: EVQVLPCAGECR*AGRDSKLKPHE Trigger: CTCGTGCGGCTTGAGTTTAGAGTCACGCCCTGCCCAGCGACATTCTCCCGCGCACGGGAGAACCTGCACTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS TCA 72 bp | GGAGAACTGCTTGAGCCGGATAGGCAGAGGTTGCAGTaGGCTGAGATCACGCCACTGAATTCCAGCCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GELLEPDRQRLQ*AEITPLNSSLG Trigger: GCCCAGGCTGGAATTCAGTGGCGTGATCTCAGCTCACTGCAACCTCTGCCTATCCGGCTCAAGCAGTTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS CCA 72 bp | ACCGGAGCTCTGGCGGGGGACCGAAAGTGTGTCTGTTaGAGTGGTTGGCAGTGGCGTTTATTGAAAGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TGALAGDRKCVC*SGWQWRLLKEG Trigger: CCCCTCTTTCAATAAACGCCACTGCCAACCACTCCAACAGACACACTTTCGGTCCCCCGCCAGAGCTCCGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS CCA 72 bp | CTCCTCGCCGCTCCAGCCTCAGCTTCTAATCCGAATTaGAAGCGGGTAGCTGCGAGCGATCACCCTGGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: LLAAPASASNPN*KRVAASDHPGN Trigger: ATTTCCAGGGTGATCGCTCGCAGCTACCCGCTTCCAATTCGGATTAGAAGCTGAGGCTGGAGCGGCGAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675861.1 |
||
| CDS CAA 72 bp | CACCGGAGCTCTGGCGGGGGACCGAAAGTGTGTCTGTaGGAGTGGTTGGCAGTGGCGTTTATTGAAAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: HRSSGGGPKVCL*EWLAVAFIERG Trigger: CCCTCTTTCAATAAACGCCACTGCCAACCACTCCAACAGACACACTTTCGGTCCCCCGCCAGAGCTCCGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS CCA 72 bp | AGCTCTGGCGGGGGACCGAAAGTGTGTCTGTTGGAGTaGTTGGCAGTGGCGTTTATTGAAAGAGGGGCGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SSGGGPKVCLLE*LAVAFIERGAH Trigger: ATGCGCCCCTCTTTCAATAAACGCCACTGCCAACCACTCCAACAGACACACTTTCGGTCCCCCGCCAGAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS CCA 72 bp | CTCAGGCCTGTAATCCCAAAACGTTGGGAGGTCCAGTaGGCGTATCACCCGAGGTCAGGAATTCCAGACCAG | + |
|
Preference number: 6 (lower is better) Translates to: LRPVIPKRWEVQ*AYHPRSGIPDQ Trigger: CTGGTCTGGAATTCCTGACCTCGGGTGATACGCCCACTGGACCTCCCAACGTTTTGGGATTACAGGCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS TCA 72 bp | CAGAAGCTGAAGTGGTGTTGGGGGCAGGTTATCTGGTaGAGTAGGAATGTACAGGAACCCCGCCCTCTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: QKLKWCWGQVIW*SRNVQEPRPLG Trigger: GCCTAGAGGGCGGGGTTCCTGTACATTCCTACTTCACCAGATAACCTGCCCCCAACACCACTTCAGCTTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000399387.9 ENST00000622740.3 ENST00000668749.1 |
||
| CDS TCA 72 bp | ATTCTCCTGCCTCAGCCGGATAGGCAGAGGTTGCAGTaGGCTGAGATCACGCCACTGAATTCCAGCCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: ILLPQPDRQRLQ*AEITPLNSSLE Trigger: TTCCAGGCTGGAATTCAGTGGCGTGATCTCAGCTCACTGCAACCTCTGCCTATCCGGCTGAGGCAGGAGAAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550266.1 |
||
| CDS CCA 72 bp | GGGGACCGAAAGTGTGTCTGTTGGAGTGGTTGGCAGTaGCGTTTATTGAAAGAGGGGCGCATTATTCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GDRKCVCWSGWQ*RLLKEGRIILP Trigger: GGGGAGAATAATGCGCCCCTCTTTCAATAAACGCCACTGCCAACCACTCCAACAGACACACTTTCGGTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS CCA 72 bp | CTGGCGGGGGACCGAAAGTGTGTCTGTTGGAGTGGTTaGCAGTGGCGTTTATTGAAAGAGGGGCGCATTATT | + |
|
Preference number: 6 (lower is better) Translates to: LAGDRKCVCWSG*QWRLLKEGRII Trigger: AATAATGCGCCCCTCTTTCAATAAACGCCACTGCCAACCACTCCAACAGACACACTTTCGGTCCCCCGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS TCA 72 bp | AGTGTGTCTGTTGGAGTGGTTGGCAGTGGCGTTTATTaGAAGAGGGGCGCATTATTCTCCCCTCCCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SVSVGVVGSGVY*KRGALFSPPSF Trigger: GAAGGAGGGAGGGGAGAATAATGCGCCCCTCTTTCAATAAACGCCACTGCCAACCACTCCAACAGACACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS GCA 72 bp | GAGCCCTGCTTGTTGGAATGGCTGCGCAGATTTTCATaGTGGAGAGTTCCATCTGTCTGGCAGAAGCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: EPCLLEWLRRFS*WRVPSVWQKLK Trigger: CTTCAGCTTCTGCCAGACAGATGGAACTCTCCAGCATGAAAATCTGCGCAGCCATTCCAACAAGCAGGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000399387.9 ENST00000552957.5 ENST00000622740.3 ENST00000668749.1 |
||
| CDS GCA 72 bp | GACAACCTCAGGCAGAGCCCTGCTTGTTGGAATGGCTaGGCAGATTTTCATGCTGGAGAGTTCCATCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: DNLRQSPACWNG*ADFHAGEFHLS Trigger: AGACAGATGGAACTCTCCAGCATGAAAATCTGCGCAGCCATTCCAACAAGCAGGGCTCTGCCTGAGGTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000399387.9 ENST00000548213.2 ENST00000552957.5 ENST00000622740.3 ENST00000668749.1 ENST00000675861.1 |
||
| CDS GCA 72 bp | TTAACCCGACAGCTCGGTGCACCCCGTCGCACGCTTTaGACACTCATTAAAACGATTATTCACGACCTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: LTRQLGAPRRTL*TLIKTIIHDLS Trigger: CGACAGGTCGTGAATAATCGTTTTAATGAGTGTGCAAAGCGTGCGACGGGGTGCACCGAGCTGTCGGGTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552957.5 |
||
| CDS CCA 72 bp | CTGCGCAGATTTTCATGCTGGAGAGTTCCATCTGTCTaGCAGAAGCTGAAGTGGTGTTGGGGGCAGGTTATC | + |
|
Preference number: 6 (lower is better) Translates to: LRRFSCWRVPSV*QKLKWCWGQVI Trigger: GATAACCTGCCCCCAACACCACTTCAGCTTCTGCCAGACAGATGGAACTCTCCAGCATGAAAATCTGCGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000399387.9 ENST00000622740.3 ENST00000668749.1 |
||
| CDS CCA 72 bp | TTCGGACAACCTCAGGCAGAGCCCTGCTTGTTGGAATaGCTGCGCAGATTTTCATGCTGGAGAGTTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: FGQPQAEPCLLE*LRRFSCWRVPS Trigger: AGATGGAACTCTCCAGCATGAAAATCTGCGCAGCCATTCCAACAAGCAGGGCTCTGCCTGAGGTTGTCCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000399387.9 ENST00000548213.2 ENST00000552957.5 ENST00000622740.3 ENST00000668749.1 ENST00000675861.1 |
||
| CDS TCA 72 bp | ACACACGGACATACAGAGGGAAATAATAGACACTGCTaGCTCCAAAAGGAGGGAGGGCGGAAAGAAGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: THGHTEGNNRHC*LQKEGGRKEGE Trigger: CTCCCCTTCTTTCCGCCCTCCCTCCTTTTGGAGTCAGCAGTGTCTATTATTTCCCTCTGTATGTCCGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS GCA 72 bp | GAGCCCTGCTTGTTGGAATGGCTGCGCAGATTTTCATaGTGGAGAGTTCCATCTGTCTGGCAGAAGTCGATT | + |
|
Preference number: 6 (lower is better) Translates to: EPCLLEWLRRFS*WRVPSVWQKSI Trigger: AATCGACTTCTGCCAGACAGATGGAACTCTCCAGCATGAAAATCTGCGCAGCCATTCCAACAAGCAGGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000675861.1 |
||
| CDS CAA 72 bp | AAGTGTGTCTGTTGGAGTGGTTGGCAGTGGCGTTTATaGAAAGAGGGGCGCATTATTCTCCCCTCCCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: KCVCWSGWQWRL*KEGRIILPSLL Trigger: AAGGAGGGAGGGGAGAATAATGCGCCCCTCTTTCAATAAACGCCACTGCCAACCACTCCAACAGACACACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS CAA 90 bp | ATCCGATGCTCTGGAATCTCAATCTCGACAGAATGCCAAGAATGCTaGGTCCTACAAGGACCACGTCGTCGCTACGTTAACTTCAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: IRCSGISISTECQEC*VLQGPRRRYVNFKG Trigger: GCCCTTGAAGTTAACGTAGCGACGACGTGGTCCTTGTAGGACCAAGCATTCTTGGCATTCTGTCGAGATTGAGATTCCAGAGCATCGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552957.5 |
||
| CDS CAA 90 bp | ATTCACGACCTGTCGAGTGTTTTCGGGTTCATTCACAGGAAAGGCTaGGAACGAGGGACAGCAATTCAAGTCAACACTGTCCACTACCCC | + |
|
Preference number: 6 (lower is better) Translates to: IHDLSSVFGFIHRKG*ERGTAIQVNTVHYP Trigger: GGGGTAGTGGACAGTGTTGACTTGAATTGCTGTCCCTCGTTCCAAGCCTTTCCTGTGAATGAACCCGAAAACACTCGACAGGTCGTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552957.5 |
||
| CDS CAA 90 bp | TCACTTTGCACTTTAACAATCGGATTTGGTCAGGGTACAAGTTGTTaGTTTAACCCGACAGCTCGGTGCACCCCGTCGCACGCTTTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SLCTLTIGFGQGTSC*FNPTARCTPSHALH Trigger: GTGCAAAGCGTGCGACGGGGTGCACCGAGCTGTCGGGTTAAACAAACAACTTGTACCCTGACCAAATCCGATTGTTAAAGTGCAAAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552957.5 |
||
| CDS TCA 72 bp | TTTCATGCTGGAGAGTTCCATCTGTCTGGCAGAAGCTaGAGTGGTGTTGGGGGCAGGTTATCTGGTGAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: FHAGEFHLSGRS*SGVGGRLSGEV Trigger: TACTTCACCAGATAACCTGCCCCCAACACCACTTCAGCTTCTGCCAGACAGATGGAACTCTCCAGCATGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000399387.9 ENST00000622740.3 ENST00000668749.1 |
||
| CDS TCA 72 bp | AATTCAAGTCAACACTGTCCACTACCCCTATGCACGTaGGGACGAGTTGCTGCGTGCGTAAAAAGACGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: NSSQHCPLPLCT*GRVAACVKRRR Trigger: CCTTCGTCTTTTTACGCACGCAGCAACTCGTCCTCACGTGCATAGGGGTAGTGGACAGTGTTGACTTGAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000552957.5 |
||
| CDS CAA 72 bp | ACTTTAACAATCGGATTTGGTCAGGGTACAAGTTGTTaGTTTAACCCGACAGCTCGGTGCACCCCGTCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TLTIGFGQGTSC*FNPTARCTPSH Trigger: GTGCGACGGGGTGCACCGAGCTGTCGGGTTAAACAAACAACTTGTACCCTGACCAAATCCGATTGTTAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552957.5 |
||
| CDS GCA 72 bp | TTCATCCGATGCTCTGGAATCTCAATCTCGACAGAATaGCAAGAATGCTTGGTCCTACAAGGACCACGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: FIRCSGISISTE*QECLVLQGPRR Trigger: ACGACGTGGTCCTTGTAGGACCAAGCATTCTTGGCATTCTGTCGAGATTGAGATTCCAGAGCATCGGATGAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552957.5 |
||
| CDS CCA 72 bp | CTGGAATCTCAATCTCGACAGAATGCCAAGAATGCTTaGTCCTACAAGGACCACGTCGTCGCTACGTTAACT | + |
|
Preference number: 6 (lower is better) Translates to: LESQSRQNAKNA*SYKDHVVATLT Trigger: AGTTAACGTAGCGACGACGTGGTCCTTGTAGGACCAAGCATTCTTGGCATTCTGTCGAGATTGAGATTCCAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552957.5 |
||
| CDS CCA 72 bp | TGTCGAGTGTTTTCGGGTTCATTCACAGGAAAGGCTTaGAACGAGGGACAGCAATTCAAGTCAACACTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: CRVFSGSFTGKA*NEGQQFKSTLS Trigger: GGACAGTGTTGACTTGAATTGCTGTCCCTCGTTCCAAGCCTTTCCTGTGAATGAACCCGAAAACACTCGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552957.5 |
||
| CDS CAA 72 bp | TCTGGAATCTCAATCTCGACAGAATGCCAAGAATGCTaGGTCCTACAAGGACCACGTCGTCGCTACGTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: SGISISTECQEC*VLQGPRRRYVN Trigger: GTTAACGTAGCGACGACGTGGTCCTTGTAGGACCAAGCATTCTTGGCATTCTGTCGAGATTGAGATTCCAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552957.5 |
||
| CDS CAA 72 bp | CTGTCGAGTGTTTTCGGGTTCATTCACAGGAAAGGCTaGGAACGAGGGACAGCAATTCAAGTCAACACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LSSVFGFIHRKG*ERGTAIQVNTV Trigger: GACAGTGTTGACTTGAATTGCTGTCCCTCGTTCCAAGCCTTTCCTGTGAATGAACCCGAAAACACTCGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552957.5 |
||
| CDS GCA 72 bp | AGTAATTCTTTCAACATGTATTGCGTGCCTACTAAGTaGAGACACTGGCCTAGGCCCTGGAGGCCTAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: SNSFNMYCVPTK*RHWPRPWRPKS Trigger: AGATTTAGGCCTCCAGGGCCTAGGCCAGTGTCTGCACTTAGTAGGCACGCAATACATGTTGAAAGAATTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS CCA 72 bp | ACTGGCCTAGGCCCTGGAGGCCTAAATCTCAGTTACTaGTATGAATTTGTACAGGGAATTCAGAAAGGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: TGLGPGGLNLSY*YEFVQGIQKGV Trigger: TACCCCTTTCTGAATTCCCTGTACAAATTCATACCAGTAACTGAGATTTAGGCCTCCAGGGCCTAGGCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS CAA 72 bp | CAGGTGCCTCTTGGCTGCAACAATTACTCAGACTCCTaGTTTTCAATGACCCTGACAGTTTGGAGCAGTACT | + |
|
Preference number: 6 (lower is better) Translates to: QVPLGCNNYSDS*FSMTLTVWSST Trigger: AGTACTGCTCCAAACTGTCAGGGTCATTGAAAACAAGGAGTCTGAGTAATTGTTGCAGCCAAGAGGCACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS CAA 90 bp | CTGCAACAATTACTCAGACTCCTTGTTTTCAATGACCCTGACAGTTaGGAGCAGTACTGGTCAGGTATTTTGTCAATGTCGCCCTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LQQLLRLLVFNDPDS*EQYWSGILSMSPFG Trigger: CCCAAAGGGCGACATTGACAAAATACCTGACCAGTACTGCTCCAAACTGTCAGGGTCATTGAAAACAAGGAGTCTGAGTAATTGTTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS CCA 72 bp | TACGCCTTAGCTATAAGTCCCGTTCATCCGATGCTCTaGAATCTCAATCTCGACAGAATGCCAAGAATGCTT | + |
|
Preference number: 6 (lower is better) Translates to: YALAISPVHPML*NLNLDRMPRML Trigger: AAGCATTCTTGGCATTCTGTCGAGATTGAGATTCCAGAGCATCGGATGAACGGGACTTATAGCTAAGGCGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552957.5 |
||
| CDS CAA 72 bp | GACCCTGACAGTTTGGAGCAGTACTGGTCAGGTATTTaGTCAATGTCGCCCTTTGGGGATTTGCTTTATGTT | + |
|
Preference number: 6 (lower is better) Translates to: DPDSLEQYWSGI*SMSPFGDLLYV Trigger: AACATAAAGCAAATCCCCAAAGGGCGACATTGACAAAATACCTGACCAGTACTGCTCCAAACTGTCAGGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS TCA 72 bp | CTAGGTCTGTTCAAGCTTTATGCTGCCACAGTGCCGTaGACTTCAAGAACATTATCCAGTGGCTATAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LGLFKLYAATVP*TSRTLSSGYSL Trigger: AAGACTATAGCCACTGGATAATGTTCTTGAAGTTCACGGCACTGTGGCAGCATAAAGCTTGAACAGACCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399387.9 |
||
| CDS TCA 72 bp | GAAGGAAGTCGCTATGCACAGTTCACACTTAAGGACTaGGGAAGAGTTATGTTCCATCTCCTTGAAGGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: EGSRYAQFTLKD*GRVMFHLLEGR Trigger: TCTACCTTCAAGGAGATGGAACATAACTCTTCCTCAGTCCTTAAGTGTGAACTGTGCATAGCGACTTCCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS TCA 72 bp | GTACCCTTTGACCAACATCATCGCTTTTTCCACCTCTaGCCCAAACAAATTCTGGCAACCACCATTCTACTT | + |
|
Preference number: 6 (lower is better) Translates to: VPFDQHHRFFHL*PKQILATTILL Trigger: AAGTAGAATGGTGGTTGCCAGAATTTGTTTGGGTCAGAGGTGGAAAAAGCGATGATGTTGGTCAAAGGGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS CAA 72 bp | ACTGATAGACCGTGTGTGTGTGTGTGTGTGTGTGTCTaGAGCACTTTCTTACTTTCTGACACTACAAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: TDRPCVCVCVCV*STFLLSDTTRF Trigger: GAACCTTGTAGTGTCAGAAAGTAAGAAAGTGCTCAAGACACACACACACACACACACACACGGTCTATCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS CAA 90 bp | AAAGGAGGGAGGGCGGAAAGAAGGGGAGGGTTGAAAAATTACCTGTaGGATACAATGTTCATTATTTGGGAGATGAGTATACCAGAAACC | + |
|
Preference number: 6 (lower is better) Translates to: KGGRAERRGGLKNYL*DTMFIIWEMSIPET Trigger: GGTTTCTGGTATACTCATCTCCCAAATAATGAACATTGTATCCAACAGGTAATTTTTCAACCCTCCCCTTCTTTCCGCCCTCCCTCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS CAA 72 bp | TTACTCAGACTCCTTGTTTTCAATGACCCTGACAGTTaGGAGCAGTACTGGTCAGGTATTTTGTCAATGTCG | + |
|
Preference number: 6 (lower is better) Translates to: LLRLLVFNDPDS*EQYWSGILSMS Trigger: CGACATTGACAAAATACCTGACCAGTACTGCTCCAAACTGTCAGGGTCATTGAAAACAAGGAGTCTGAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS CAA 72 bp | TTTCCGAAAGGCAATGGAAATGGTACTGACATCACTTaGCACTTTAACAATCGGATTTGGTCAGGGTACAAG | + |
|
Preference number: 6 (lower is better) Translates to: FPKGNGNGTDIT*HFNNRIWSGYK Trigger: CTTGTACCCTGACCAAATCCGATTGTTAAAGTGCAAAGTGATGTCAGTACCATTTCCATTGCCTTTCGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552957.5 |
||
| CDS CAA 72 bp | AAAAACCTCTGTACTATTTCATGCATAGCACCTGTATaGCTGCCACACATGGATCTTGCTGTAAGAGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: KNLCTISCIAPV*LPHMDLAVRAI Trigger: AATGGCTCTTACAGCAAGATCCATGTGTGGCAGCAATACAGGTGCTATGCATGAAATAGTACAGAGGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668749.1 |
||
| CDS TCA 72 bp | TGTGTGTGTGTGTGTCTTGAGCACTTTCTTACTTTCTaGCACTACAAGGTTCTCTCAGTTCATCTTGTATGT | + |
|
Preference number: 6 (lower is better) Translates to: CVCVCLEHFLTF*HYKVLSVHLVC Trigger: ACATACAAGATGAACTGAGAGAACCTTGTAGTGTCAGAAAGTAAGAAAGTGCTCAAGACACACACACACACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS GCA 72 bp | AGACAACCTGAAGCAATTGATTCTGTCAGCTTAAGTTaGTCTCACATTATCCTTAAGCTGGTGAGAGTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: RQPEAIDSVSLS*SHIILKLVRVD Trigger: ATCAACTCTCACCAGCTTAAGGATAATGTGAGAGCAACTTAAGCTGACAGAATCAATTGCTTCAGGTTGTCT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS CAA 72 bp | TTACTTTCTGACACTACAAGGTTCTCTCAGTTCATCTaGTATGTTTTCTGCTTCAGTCCTAGAATCAGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: LLSDTTRFSQFI*YVFCFSPRIRR Trigger: ACGCCTGATTCTAGGACTGAAGCAGAAAACATACAAGATGAACTGAGAGAACCTTGTAGTGTCAGAAAGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS CAA 72 bp | AGGGCGGAAAGAAGGGGAGGGTTGAAAAATTACCTGTaGGATACAATGTTCATTATTTGGGAGATGAGTATA | + |
|
Preference number: 6 (lower is better) Translates to: RAERRGGLKNYL*DTMFIIWEMSI Trigger: TATACTCATCTCCCAAATAATGAACATTGTATCCAACAGGTAATTTTTCAACCCTCCCCTTCTTTCCGCCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS CAA 72 bp | GATGGGAAGCTGATGATCATGCCAGCCTTCACTGTATaGACTAATGAAAAACCTCTGTACTATTTCATGCAT | + |
|
Preference number: 6 (lower is better) Translates to: DGKLMIMPAFTV*TNEKPLYYFMH Trigger: ATGCATGAAATAGTACAGAGGTTTTTCATTAGTCAATACAGTGAAGGCTGGCATGATCATCAGCTTCCCATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668749.1 |
||
| CDS CAA 90 bp | TCTAGTACACCTAACAAACTTCTAGTCATATCCATTATATGTAATTaGGACATGGGTCCAAGCAGAACTCCCACTCCAATACTTCGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSTPNKLLVISIICN*DMGPSRTPTPILRF Trigger: GAAACGAAGTATTGGAGTGGGAGTTCTGCTTGGACCCATGTCCAAATTACATATAATGGATATGACTAGAAGTTTGTTAGGTGTACTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000399387.9 ENST00000622740.3 ENST00000668749.1 |
||
| CDS TCA 72 bp | GATAAGTTGAGGGATGATAAGATAGATCAAGGGAAATaGGATGTTCATATTGGGCTTCAGGAAGCCTTTACA | + |
|
Preference number: 6 (lower is better) Translates to: DKLRDDKIDQGK*DVHIGLQEAFT Trigger: TGTAAAGGCTTCCTGAAGCCCAATATGAACATCTCATTTCCCTTGATCTATCTTATCATCCCTCAACTTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000399387.9 ENST00000622740.3 ENST00000668749.1 |
||
| CDS CCA 72 bp | GCAGTACTGGTCAGGTATTTTGTCAATGTCGCCCTTTaGGGATTTGCTTTATGTTTTTCTTACAATTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: AVLVRYFVNVAL*GFALCFSYNCT Trigger: AGTACAATTGTAAGAAAAACATAAAGCAAATCCCCAAAGGGCGACATTGACAAAATACCTGACCAGTACTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS CAA 72 bp | CCTAACAAACTTCTAGTCATATCCATTATATGTAATTaGGACATGGGTCCAAGCAGAACTCCCACTCCAATA | + |
|
Preference number: 6 (lower is better) Translates to: PNKLLVISIICN*DMGPSRTPTPI Trigger: TATTGGAGTGGGAGTTCTGCTTGGACCCATGTCCAAATTACATATAATGGATATGACTAGAAGTTTGTTAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000399387.9 ENST00000622740.3 ENST00000668749.1 |
||
| CDS TCA 72 bp | GTCTTGACAAATGCATGCTGTTGTGTATCCATCACTTaGGTATCATACATGATAGTTTCATCATCCTTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: VLTNACCCVSIT*VSYMIVSSSFR Trigger: CCTAAAGGATGATGAAACTATCATGTATGATACTCAAGTGATGGATACACAACAGCATGCATTTGTCAAGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS TCA 72 bp | GCTCTCAATTCAATTTCACTGGTCTGTGTATCTGTTTaGGGGAAGTGCCATACTGTTTTGATTAGTATAGTT | + |
|
Preference number: 6 (lower is better) Translates to: ALNSISLVCVSV*GKCHTVLISIV Trigger: AACTATACTAATCAAAACAGTATGGCACTTCCCTCAAACAGATACACAGACCAGTGAAATTGAATTGAGAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS TCA 72 bp | CAGTGGCAAGAATTAGTTGATCATACATGTATGAGTTaGTTTCTGAGCTCTCAATTCAATTTCACTGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QWQELVDHTCMS*FLSSQFNFTGL Trigger: CAGACCAGTGAAATTGAATTGAGAGCTCAGAAATCAACTCATACATGTATGATCAACTAATTCTTGCCACTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS GCA 72 bp | GAGACAACAAATAACACAACATTACAACCCGTTCGATaGAAAAATGTATTATATGCCATGCCAGACTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: ETTNNTTLQPVR*KNVLYAMPDCH Trigger: ATGACAGTCTGGCATGGCATATAATACATTTTTGCATCGAACGGGTTGTAATGTTGTGTTATTTGTTGTCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000399387.9 ENST00000622740.3 ENST00000668749.1 |
||
| CDS CCA 72 bp | CATGAGTTGTCCCTGTTAATGTTAATCTTGATCACTTaGCTGTTTGTCAGGTTTCTTGGCTATAAAGTTACT | + |
|
Preference number: 6 (lower is better) Translates to: HELSLLMLILIT*LFVRFLGYKVT Trigger: AGTAACTTTATAGCCAAGAAACCTGACAAACAGCCAAGTGATCAAGATTAACATTAACAGGGACAACTCATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS CAA 72 bp | GTTGAAAAATTACCTGTTGGATACAATGTTCATTATTaGGGAGATGAGTATACCAGAAACCCAAACCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: VEKLPVGYNVHY*GDEYTRNPNLT Trigger: GGTGAGGTTTGGGTTTCTGGTATACTCATCTCCCAAATAATGAACATTGTATCCAACAGGTAATTTTTCAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS CAA 90 bp | ATCAACTTTTCAACTAAATTCAGCCAAAAACAGAAGTCACCTGATTaGAAGATACCCATTAACCCTAGGCATGATATGCCTAAAGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: INFSTKFSQKQKSPD*KIPINPRHDMPKDR Trigger: TCTGTCTTTAGGCATATCATGCCTAGGGTTAATGGGTATCTTCAAATCAGGTGACTTCTGTTTTTGGCTGAATTTAGTTGAAAAGTTGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661288.1 |
||
| CDS CAA 90 bp | CACAGTTCACACTTAAGGACTGAGGAAGAGTTATGTTCCATCTCCTaGAAGGTAGAGTATCTACATAAATTATTAGCACAGAATATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: HSSHLRTEEELCSIS*KVEYLHKLLAQNIC Trigger: ACAAATATTCTGTGCTAATAATTTATGTAGATACTCTACCTTCAAGGAGATGGAACATAACTCTTCCTCAGTCCTTAAGTGTGAACTGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS CAA 90 bp | TTTTTCCATTTATCCATCAATAGACATTTAGGTAGCTTTCATATGTaGGCAATTGTAAATAATGCTGCAACGAACATGGGAGTGCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: FFHLSINRHLGSFHM*AIVNNAATNMGVQV Trigger: TACCTGCACTCCCATGTTCGTTGCAGCATTATTTACAATTGCCAACATATGAAAGCTACCTAAATGTCTATTGATGGATAAATGGAAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS CCA 72 bp | TTGAAAAATTACCTGTTGGATACAATGTTCATTATTTaGGAGATGAGTATACCAGAAACCCAAACCTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: LKNYLLDTMFII*EMSIPETQTSP Trigger: TGGTGAGGTTTGGGTTTCTGGTATACTCATCTCCCAAATAATGAACATTGTATCCAACAGGTAATTTTTCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS GCA 72 bp | AGTTTTTGTGCTATAAATTGTATGGGTCTTGACAAATaGATGCTGTTGTGTATCCATCACTTGAGTATCATA | + |
|
Preference number: 6 (lower is better) Translates to: SFCAINCMGLDK*MLLCIHHLSII Trigger: TATGATACTCAAGTGATGGATACACAACAGCATGCATTTGTCAAGACCCATACAATTTATAGCACAAAAACT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS CAA 72 bp | TTACATCATATCAAGAGTAGGTATTATCAACATGAGTaGTCCCTGTTAATGTTAATCTTGATCACTTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LHHIKSRYYQHE*SLLMLILITWL Trigger: CAGCCAAGTGATCAAGATTAACATTAACAGGGACAACTCATGTTGATAATACCTACTCTTGATATGATGTAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS CAA 72 bp | ATTATCTTCCATTCTGTAGGTGTCCTTTTCATCCCATaGGTTGTTTCATTTGCTGTTCGAAAGCTTTTTAAT | + |
|
Preference number: 6 (lower is better) Translates to: IIFHSVGVLFIP*VVSFAVRKLFN Trigger: ATTAAAAAGCTTTCGAACAGCAAATGAAACAACCAATGGGATGAAAAGGACACCTACAGAATGGAAGATAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||
| CDS CAA 72 bp | TTATCCATCAATAGACATTTAGGTAGCTTTCATATGTaGGCAATTGTAAATAATGCTGCAACGAACATGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LSINRHLGSFHM*AIVNNAATNMG Trigger: TCCCATGTTCGTTGCAGCATTATTTACAATTGCCAACATATGAAAGCTACCTAAATGTCTATTGATGGATAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622740.3 |
||