Pregenerated sensors for LINC01549 (Homo sapiens)

Ensembl gene IDs: ENSG00000232560

Ensembl transcript IDs: ENST00000440664.6

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	ATGTCCTCTGAGAAGTGCAAGGAGTTCAGCGAAATGTGGGCAGTTTaGGATGACAAGGATACAGAGGTTATGGAAGGGGCATATCGCGAA	+
Preference number: 5 (lower is better) Translates to: MSSEKCKEFSEMWAV*DDKDTEVMEGAYRE Trigger: TTCGCGATATGCCCCTTCCATAACCTCTGTATCCTTGTCATCCCAAACTGCCCACATTTCGCTGAACTCCTTGCACTTCTCAGAGGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440664.6
CDS CCA 90 bp	TCAGCGAAATGTGGGCAGTTTGGGATGACAAGGATACAGAGGTTATaGAAGGGGCATATCGCGAAGGAGCTTATTTCAAATTCATTCACC	+
Preference number: 5 (lower is better) Translates to: SAKCGQFGMTRIQRL*KGHIAKELISNSFT Trigger: GGTGAATGAATTTGAAATAAGCTCCTTCGCGATATGCCCCTTCCATAACCTCTGTATCCTTGTCATCCCAAACTGCCCACATTTCGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440664.6
CDS TCA 90 bp	GTGGAGATTCACTTTGCAGTAAATCTTCATACAGTCACTGTTTTCTaGCTCGTCGTCTTTGGATTCCTTCTATATCGGTGTCAGGTGCCT	+
Preference number: 5 (lower is better) Translates to: VEIHFAVNLHTVTVF*LVVFGFLLYRCQVP Trigger: AGGCACCTGACACCGATATAGAAGGAATCCAAAGACGACGAGTCAGAAAACAGTGACTGTATGAAGATTTACTGCAAAGTGAATCTCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440664.6
CDS CCA 72 bp	GGGAACACTCAGCAGGCTCCCAGCCCCGAACACCCCTaGAGTCTCAACAGCCTCAATCCATCTGGAAGGGAG	+
Preference number: 6 (lower is better) Translates to: GNTQQAPSPEHP*SLNSLNPSGRE Trigger: CTCCCTTCCAGATGGATTGAGGCTGTTGAGACTCCAGGGGTGTTCGGGGCTGGGAGCCTGCTGAGTGTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000440664.6
CDS CCA 72 bp	GGGCTGATACTTTGCAAACCAGGGTGTAGACCAAGCTaGCTGAGGCTGACTGGACCCAACATGGTGCTGGAT	+
Preference number: 6 (lower is better) Translates to: GLILCKPGCRPS*LRLTGPNMVLD Trigger: ATCCAGCACCATGTTGGGTCCAGTCAGCCTCAGCCAGCTTGGTCTACACCCTGGTTTGCAAAGTATCAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440664.6
CDS GCA 72 bp	TCGTCGTCTTTGGATTCCTTCTATATCGGTGTCAGGTaGCTGGACATTAGCAGGGGTCAGGGTCTCACCAGT	+
Preference number: 6 (lower is better) Translates to: SSSLDSFYIGVR*LDISRGQGLTS Trigger: ACTGGTGAGACCCTGACCCCTGCTAATGTCCAGGCACCTGACACCGATATAGAAGGAATCCAAAGACGACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440664.6
CDS CCA 72 bp	ATGTCCTCTGAGAAGTGCAAGGAGTTCAGCGAAATGTaGGCAGTTTGGGATGACAAGGATACAGAGGTTATG	+
Preference number: 6 (lower is better) Translates to: MSSEKCKEFSEM*AVWDDKDTEVM Trigger: CATAACCTCTGTATCCTTGTCATCCCAAACTGCCCACATTTCGCTGAACTCCTTGCACTTCTCAGAGGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440664.6
CDS GCA 72 bp	AGTAGGCCTGAACTGCACTTCCGTGGAGATTCACTTTaGAGTAAATCTTCATACAGTCACTGTTTTCTGACT	+
Preference number: 6 (lower is better) Translates to: SRPELHFRGDSL*SKSSYSHCFLT Trigger: AGTCAGAAAACAGTGACTGTATGAAGATTTACTGCAAAGTGAATCTCCACGGAAGTGCAGTTCAGGCCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440664.6
CDS CAA 72 bp	GATATTCTCTCTTCACCTCACTATAGCTTAATGGAATaGCTCCACCTCACCTTTTACGAGAACCAGTACGAC	+
Preference number: 6 (lower is better) Translates to: DILSSPHYSLME*LHLTFYENQYD Trigger: GTCGTACTGGTTCTCGTAAAAGGTGAGGTGGAGCAATTCCATTAAGCTATAGTGAGGTGAAGAGAGAATATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440664.6