Pregenerated sensors for LINC01547 (Homo sapiens)
Ensembl gene IDs: ENSG00000183250Ensembl transcript IDs: ENST00000330551.3, ENST00000397841.5, ENST00000615847.2, ENST00000654166.1, ENST00000657006.1, ENST00000658179.1, ENST00000660377.1, ENST00000663249.1, ENST00000664358.1, ENST00000667826.1
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCGCGCCACCCGCGTCCTCCGGTCTGTTTCTCCCAGGTGCGTCGGTaGAAGGCGGAGCGCCGCCACCCTACACCCGCGACCCTGCGCCCG | + |
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Preference number: 5 (lower is better) Translates to: PRHPRPPVCFSQVRR*KAERRHPTPATLRP Trigger: CGGGCGCAGGGTCGCGGGTGTAGGGTGGCGGCGCTCCGCCTTTCACCGACGCACCTGGGAGAAACAGACCGGAGGACGCGGGTGGCGCGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654166.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS GCA 90 bp | CTCGTGCTCCGCGCCACCCGCGTCCTCCGGTCTGTTTCTCCCAGGTaGGTCGGTGAAAGGCGGAGCGCCGCCACCCTACACCCGCGACCC | + |
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Preference number: 5 (lower is better) Translates to: LVLRATRVLRSVSPR*VGERRSAATLHPRP Trigger: GGGTCGCGGGTGTAGGGTGGCGGCGCTCCGCCTTTCACCGACGCACCTGGGAGAAACAGACCGGAGGACGCGGGTGGCGCGGAGCACGAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654166.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS TCA 90 bp | CCGGGCGTGGCGGTGCCCACCGGTGGTCCCACCTTCTCGAGAGGCTaGGGCGGGAGGATCGCTCGAGTCCTGGACGTCGAGGCTGCAATG | + |
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Preference number: 5 (lower is better) Translates to: PGVAVPTGGPTFSRG*GGRIARVLDVEAAM Trigger: CATTGCAGCCTCGACGTCCAGGACTCGAGCGATCCTCCCGCCTCAGCCTCTCGAGAAGGTGGGACCACCGGTGGGCACCGCCACGCCCGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654166.1 ENST00000658179.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 90 bp | TGGAGAAGAGGGATTGAGTGGAGTCCACGGGTCATGGCCACGTCCTaGGTGCTGCCTCTGAGGCAGGGCCCGGCTGGGGTGAGAAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: WRRGIEWSPRVMATS*VLPLRQGPAGVRRG Trigger: GCCCCTTCTCACCCCAGCCGGGCCCTGCCTCAGAGGCAGCACCCAGGACGTGGCCATGACCCGTGGACTCCACTCAATCCCTCTTCTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 90 bp | CCCTCTCGTGGCAGTGCTCCAGCTCCAGCGCCTGGGGGCCAAGTGTaGACTCAGAGCTTCTGTCCAGCAGAGGCCCCTGATGTGCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: PSRGSAPAPAPGGQV*TQSFCPAEAPDVQL Trigger: CAGCTGCACATCAGGGGCCTCTGCTGGACAGAAGCTCTGAGTCCACACTTGGCCCCCAGGCGCTGGAGCTGGAGCACTGCCACGAGAGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000330551.3 ENST00000397841.5 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS TCA 90 bp | TGGGGGCCAAGTGTGGACTCAGAGCTTCTGTCCAGCAGAGGCCCCTaGTGTGCAGCTGCACCGAGACACCCAGGCAGGGCGTCACCTGCA | + |
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Preference number: 5 (lower is better) Translates to: WGPSVDSELLSSRGP*CAAAPRHPGRASPA Trigger: TGCAGGTGACGCCCTGCCTGGGTGTCTCGGTGCAGCTGCACATCAGGGGCCTCTGCTGGACAGAAGCTCTGAGTCCACACTTGGCCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000330551.3 ENST00000397841.5 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS CCA 90 bp | TGGGTGCTGCCTCTGAGGCAGGGCCCGGCTGGGGTGAGAAGGGGCTaGAGACAGGTTCCTGCCAGTTCAGCCTCTAACCGGTGGTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: WVLPLRQGPAGVRRG*RQVPASSASNRWSS Trigger: TGAAGACCACCGGTTAGAGGCTGAACTGGCAGGAACCTGTCTCCAGCCCCTTCTCACCCCAGCCGGGCCCTGCCTCAGAGGCAGCACCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS TCA 90 bp | CCCACCTGGCAGGCAGGCAGGAGCCCATGGGGGAGGGTTGATCTTTaGTCTTCCTCTGATGGCCCAACGGGAACTGTGAGCACCCAGCCG | + |
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Preference number: 5 (lower is better) Translates to: PTWQAGRSPWGRVDL*SSSDGPTGTVSTQP Trigger: CGGCTGGGTGCTCACAGTTCCCGTTGGGCCATCAGAGGAAGATCAAAGATCAACCCTCCCCCATGGGCTCCTGCCTGCCTGCCAGGTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000330551.3 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS TCA 90 bp | CTGGACCTAGTCCTTGGGCTTGGGCTGGCACCCAGGGCCTGGGCTTaGGACAGCTGTGACGCAGGCAAGCCATTTACCCCGTTTGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: LDLVLGLGLAPRAWA*DSCDAGKPFTPFVG Trigger: CCCCACAAACGGGGTAAATGGCTTGCCTGCGTCACAGCTGTCTCAAGCCCAGGCCCTGGGTGCCAGCCCAAGCCCAAGGACTAGGTCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS GCA 90 bp | TGTGGACTCAGAGCTTCTGTCCAGCAGAGGCCCCTGATGTGCAGCTaGACCGAGACACCCAGGCAGGGCGTCACCTGCAAGGTCAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: CGLRASVQQRPLMCS*TETPRQGVTCKVSC Trigger: GCAGCTGACCTTGCAGGTGACGCCCTGCCTGGGTGTCTCGGTGCAGCTGCACATCAGGGGCCTCTGCTGGACAGAAGCTCTGAGTCCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000330551.3 ENST00000397841.5 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS GCA 90 bp | GCCAAGTGTGGACTCAGAGCTTCTGTCCAGCAGAGGCCCCTGATGTaGAGCTGCACCGAGACACCCAGGCAGGGCGTCACCTGCAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: AKCGLRASVQQRPLM*SCTETPRQGVTCKV Trigger: GACCTTGCAGGTGACGCCCTGCCTGGGTGTCTCGGTGCAGCTGCACATCAGGGGCCTCTGCTGGACAGAAGCTCTGAGTCCACACTTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000330551.3 ENST00000397841.5 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS TCA 90 bp | GAGCCTTCCCTCCCTGTCACAGACATGAGCCCTGGAGATCTGGAATaGGGCAGATGTGCCCAGGGAAAGCTGATCCGCCCCGACCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: EPSLPVTDMSPGDLE*GRCAQGKLIRPDPG Trigger: CCCTGGGTCGGGGCGGATCAGCTTTCCCTGGGCACATCTGCCTCATTCCAGATCTCCAGGGCTCATGTCTGTGACAGGGAGGGAAGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 90 bp | GACTGCCTTCCAGGGGCCTGGCTGGCTGACACTTTGCATGGCTCCTaGAGAAGAGGGATTGAGTGGAGTCCACGGGTCATGGCCACGTCC | + |
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Preference number: 5 (lower is better) Translates to: DCLPGAWLADTLHGS*RRGIEWSPRVMATS Trigger: GGACGTGGCCATGACCCGTGGACTCCACTCAATCCCTCTTCTCCAGGAGCCATGCAAAGTGTCAGCCAGCCAGGCCCCTGGAAGGCAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS GCA 90 bp | TGCAAGGCTGGGACTGGGGTTTGTAATCGCTGTTGTCTCTTGGCCTaGAGGATCCTCACGCGTGCCGCTTCGGTCCTGATGGGCAGGACG | + |
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Preference number: 5 (lower is better) Translates to: CKAGTGVCNRCCLLA*RILTRAASVLMGRT Trigger: CGTCCTGCCCATCAGGACCGAAGCGGCACGCGTGAGGATCCTGCAGGCCAAGAGACAACAGCGATTACAAACCCCAGTCCCAGCCTTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000330551.3 ENST00000397841.5 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS GCA 90 bp | GGCAGTTGCAGGACCGACACCCGCAATGCCTTAAGAGGTGATGACTaGCTTCCAGGGGCCTGGCTGGCTGACACTTTGCATGGCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: GSCRTDTRNALRGDD*LPGAWLADTLHGSW Trigger: CCAGGAGCCATGCAAAGTGTCAGCCAGCCAGGCCCCTGGAAGGCAGTCATCACCTCTTAAGGCATTGCGGGTGTCGGTCCTGCAACTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS GCA 90 bp | GCCAGGTCATGGCTCCCTGCTATCGAACACCGGACATGGGTCGTGTaGTGCACCTGGCAGTTGCAGGACCGACACCCGCAATGCCTTAAG | + |
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Preference number: 5 (lower is better) Translates to: ARSWLPAIEHRTWVV*CTWQLQDRHPQCLK Trigger: CTTAAGGCATTGCGGGTGTCGGTCCTGCAACTGCCAGGTGCAGCACACGACCCATGTCCGGTGTTCGATAGCAGGGAGCCATGACCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 90 bp | TGGCTGGCTGACACTTTGCATGGCTCCTGGAGAAGAGGGATTGAGTaGAGTCCACGGGTCATGGCCACGTCCTGGGTGCTGCCTCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: WLADTLHGSWRRGIE*SPRVMATSWVLPLR Trigger: CCTCAGAGGCAGCACCCAGGACGTGGCCATGACCCGTGGACTCCACTCAATCCCTCTTCTCCAGGAGCCATGCAAAGTGTCAGCCAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS TCA 90 bp | AAAACCTGGCAGGCAGGCAGGAGCCCATGGGGGAGGGTTGATCTTTaGTCTTCCTCTGATGGCCCAACGGGAACTGTGAGCACCCAGCCG | + |
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Preference number: 5 (lower is better) Translates to: KTWQAGRSPWGRVDL*SSSDGPTGTVSTQP Trigger: CGGCTGGGTGCTCACAGTTCCCGTTGGGCCATCAGAGGAAGATCAAAGATCAACCCTCCCCCATGGGCTCCTGCCTGCCTGCCAGGTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000397841.5 ENST00000654166.1 |
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| CDS GCA 90 bp | AGGTCATGGCTCCCTGCTATCGAACACCGGACATGGGTCGTGTGCTaGACCTGGCAGTTGCAGGACCGACACCCGCAATGCCTTAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: RSWLPAIEHRTWVVC*TWQLQDRHPQCLKR Trigger: CCTCTTAAGGCATTGCGGGTGTCGGTCCTGCAACTGCCAGGTGCAGCACACGACCCATGTCCGGTGTTCGATAGCAGGGAGCCATGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS GCA 90 bp | CCCGGCTCTAGCAAAACATTAATAAAAATTAGCCGGGCGTGGCGGTaGCCACCGGTGGTCCCACCTTCTCGAGAGGCTGAGGCGGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: PGSSKTLIKISRAWR*PPVVPPSREAEAGG Trigger: TCCTCCCGCCTCAGCCTCTCGAGAAGGTGGGACCACCGGTGGGCACCGCCACGCCCGGCTAATTTTTATTAATGTTTTGCTAGAGCCGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000654166.1 ENST00000658179.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 90 bp | ACCAACAACCACCCCCACCCTAGGCCCAGAGCTCACGGAGAGAGCTaGGCCTCTCGGGGTGACTACATAGTTCCCTGCTGGATCTTAGGT | + |
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Preference number: 5 (lower is better) Translates to: TNNHPHPRPRAHGES*ASRGDYIVPCWILG Trigger: ACCTAAGATCCAGCAGGGAACTATGTAGTCACCCCGAGAGGCCCAGCTCTCTCCGTGAGCTCTGGGCCTAGGGTGGGGGTGGTTGTTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS GCA 90 bp | CTGCTATCGAACACCGGACATGGGTCGTGTGCTGCACCTGGCAGTTaGAGGACCGACACCCGCAATGCCTTAAGAGGTGATGACTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: LLSNTGHGSCAAPGS*RTDTRNALRGDDCL Trigger: AAGGCAGTCATCACCTCTTAAGGCATTGCGGGTGTCGGTCCTGCAACTGCCAGGTGCAGCACACGACCCATGTCCGGTGTTCGATAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 90 bp | GCCAGTTCAGCCTCTAACCGGTGGTCTTCATGCCTAGGAACCCACTaGGGGCTTATGAAACTGCAGGTGGCTGAGTCCTTGCCATGGGGT | + |
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Preference number: 5 (lower is better) Translates to: ASSASNRWSSCLGTH*GLMKLQVAESLPWG Trigger: ACCCCATGGCAAGGACTCAGCCACCTGCAGTTTCATAAGCCCCCAGTGGGTTCCTAGGCATGAAGACCACCGGTTAGAGGCTGAACTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 90 bp | GACACCCGCAATGCCTTAAGAGGTGATGACTGCCTTCCAGGGGCCTaGCTGGCTGACACTTTGCATGGCTCCTGGAGAAGAGGGATTGAG | + |
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Preference number: 5 (lower is better) Translates to: DTRNALRGDDCLPGA*LADTLHGSWRRGIE Trigger: CTCAATCCCTCTTCTCCAGGAGCCATGCAAAGTGTCAGCCAGCCAGGCCCCTGGAAGGCAGTCATCACCTCTTAAGGCATTGCGGGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 90 bp | CAAGATCCCGGCTCTAGCAAAACATTAATAAAAATTAGCCGGGCGTaGCGGTGCCCACCGGTGGTCCCACCTTCTCGAGAGGCTGAGGCG | + |
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Preference number: 5 (lower is better) Translates to: QDPGSSKTLIKISRA*RCPPVVPPSREAEA Trigger: CGCCTCAGCCTCTCGAGAAGGTGGGACCACCGGTGGGCACCGCCACGCCCGGCTAATTTTTATTAATGTTTTGCTAGAGCCGGGATCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000654166.1 ENST00000658179.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS GCA 90 bp | TGGAGACAGGTTCCTGCCAGTTCAGCCTCTAACCGGTGGTCTTCATaGCTAGGAACCCACTGGGGGCTTATGAAACTGCAGGTGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: WRQVPASSASNRWSS*LGTHWGLMKLQVAE Trigger: CTCAGCCACCTGCAGTTTCATAAGCCCCCAGTGGGTTCCTAGGCATGAAGACCACCGGTTAGAGGCTGAACTGGCAGGAACCTGTCTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 90 bp | AGAAGGGGCTGGAGACAGGTTCCTGCCAGTTCAGCCTCTAACCGGTaGTCTTCATGCCTAGGAACCCACTGGGGGCTTATGAAACTGCAG | + |
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Preference number: 5 (lower is better) Translates to: RRGWRQVPASSASNR*SSCLGTHWGLMKLQ Trigger: CTGCAGTTTCATAAGCCCCCAGTGGGTTCCTAGGCATGAAGACCACCGGTTAGAGGCTGAACTGGCAGGAACCTGTCTCCAGCCCCTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS GCA 90 bp | AGCAGGGCTCCCGTTCCCAGCACGGGACCCAGCCCGTTACCTCGCTaGTATGTTTCCCACGTAAACGGAGCAATACCCAATTCTAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: SRAPVPSTGPSPLPR*YVSHVNGAIPNSKE Trigger: TTCTTTAGAATTGGGTATTGCTCCGTTTACGTGGGAAACATAGCAGCGAGGTAACGGGCTGGGTCCCGTGCTGGGAACGGGAGCCCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS CCA 90 bp | GGGCTTGAGACAGCTGTGACGCAGGCAAGCCATTTACCCCGTTTGTaGGGACATTACATCTTCCTAGCTTGGAACACACAGGCAGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: GLETAVTQASHLPRL*GHYIFLAWNTQAAR Trigger: CCTGGCTGCCTGTGTGTTCCAAGCTAGGAAGATGTAATGTCCCCACAAACGGGGTAAATGGCTTGCCTGCGTCACAGCTGTCTCAAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 90 bp | TCCATCTCTCAGCTGGGCGAGAAACTTGATGTCCTTTCTGAGAGGTaGCCCTGGCTCTGCCTGGGACCTGCTACTCTTCTCCAAAGTGCA | + |
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Preference number: 5 (lower is better) Translates to: SISQLGEKLDVLSER*PWLCLGPATLLQSA Trigger: TGCACTTTGGAGAAGAGTAGCAGGTCCCAGGCAGAGCCAGGGCCACCTCTCAGAAAGGACATCAAGTTTCTCGCCCAGCTGAGAGATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS CCA 90 bp | TGCGTTTGGCAGACTCATAGTTGTTTTCCTTTCACGGAGAAAGTGTaGGCAGAAGCCAGCTCTAAAGCCCAGGCTGCCCAGCCTGCACTG | + |
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Preference number: 5 (lower is better) Translates to: CVWQTHSCFPFTEKV*AEASSKAQAAQPAL Trigger: CAGTGCAGGCTGGGCAGCCTGGGCTTTAGAGCTGGCTTCTGCCCACACTTTCTCCGTGAAAGGAAAACAACTATGAGTCTGCCAAACGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS TCA 90 bp | ATAGTTCCCTGCTGGATCTTAGGTCTTGTCCTTGGGCAGCTCTGCTaGGACCTCTATGCCTGTTCCAGGCTGCACCAAGGTTTTGTGACT | + |
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Preference number: 5 (lower is better) Translates to: IVPCWILGLVLGQLC*DLYACSRLHQGFVT Trigger: AGTCACAAAACCTTGGTGCAGCCTGGAACAGGCATAGAGGTCTCAGCAGAGCTGCCCAAGGACAAGACCTAAGATCCAGCAGGGAACTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS TCA 90 bp | AGAGGAGCCTTCTGGCCACTCCTGATTAACACAGTTCCTTATTGGTaGGGGATTCTCTACTGTGGTCCTTCTGCAGTCCCACCCCATACA | + |
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Preference number: 5 (lower is better) Translates to: RGAFWPLLINTVPYW*GILYCGPSAVPPHT Trigger: TGTATGGGGTGGGACTGCAGAAGGACCACAGTAGAGAATCCCTCACCAATAAGGAACTGTGTTAATCAGGAGTGGCCAGAAGGCTCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330551.3 ENST00000667826.1 |
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| CDS CCA 90 bp | CTCCATGTTCTTCTCTTGAGAACTTTTACCAGGTATGTCAGGAGCTaGGCTCCACCAGGGAGACTCAAGTGGAAAGCCCTCATCCTTGTC | + |
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Preference number: 5 (lower is better) Translates to: LHVLLLRTFTRYVRS*APPGRLKWKALILV Trigger: GACAAGGATGAGGGCTTTCCACTTGAGTCTCCCTGGTGGAGCCCAGCTCCTGACATACCTGGTAAAAGTTCTCAAGAGAAGAACATGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 90 bp | GCAAGCCATTTACCCCGTTTGTGGGGACATTACATCTTCCTAGCTTaGAACACACAGGCAGCCAGGGTTGTTATCCACATTCCTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: ASHLPRLWGHYIFLA*NTQAARVVIHIPPP Trigger: TGGAGGAGGAATGTGGATAACAACCCTGGCTGCCTGTGTGTTCCAAGCTAGGAAGATGTAATGTCCCCACAAACGGGGTAAATGGCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS TCA 90 bp | AAAAACGTGAGCACTTTCACCTCAAGAGTCGCTAGGCTCAGATGCTaGATGCACCCTGAAGGAACTCTAAAGATACCAGCCTCTGGAGTT | + |
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Preference number: 5 (lower is better) Translates to: KNVSTFTSRVARLRC*MHPEGTLKIPASGV Trigger: AACTCCAGAGGCTGGTATCTTTAGAGTTCCTTCAGGGTGCATTCAGCATCTGAGCCTAGCGACTCTTGAGGTGAAAGTGCTCACGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000654166.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS CCA 90 bp | ACCTATGGTTACAATTCCAGGGACAAGAGCGATGCATGTGAGGTGTaGCAAATCTCACTGTTCAACTGGAGAAATCAGAGACAGCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: TYGYNSRDKSDACEV*QISLFNWRNQRQLP Trigger: AGGAAGCTGTCTCTGATTTCTCCAGTTGAACAGTGAGATTTGCCACACCTCACATGCATCGCTCTTGTCCCTGGAATTGTAACCATAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS TCA 90 bp | TCTGCTGAGACCTCTATGCCTGTTCCAGGCTGCACCAAGGTTTTGTaGCTATTGACCCTTGACTTTGAGTTGGGAGTTGCTGTATTTTTA | + |
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Preference number: 5 (lower is better) Translates to: SAETSMPVPGCTKVL*LLTLDFELGVAVFL Trigger: TAAAAATACAGCAACTCCCAACTCAAAGTCAAGGGTCAATAGTCACAAAACCTTGGTGCAGCCTGGAACAGGCATAGAGGTCTCAGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS TCA 90 bp | CAGGAAAACCTATGGTTACAATTCCAGGGACAAGAGCGATGCATGTaGGGTGTGGCAAATCTCACTGTTCAACTGGAGAAATCAGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: QENLWLQFQGQERCM*GVANLTVQLEKSET Trigger: TGTCTCTGATTTCTCCAGTTGAACAGTGAGATTTGCCACACCTCACATGCATCGCTCTTGTCCCTGGAATTGTAACCATAGGTTTTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 90 bp | TCCCATGATAACAACATTAACCCTTTCCTGACGGTAGAGTCCTTGTaGCCTAATCACCTCTTAAAGGTGCCACATCTTAATACTAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: SHDNNINPFLTVESL*PNHLLKVPHLNTSM Trigger: CATACTAGTATTAAGATGTGGCACCTTTAAGAGGTGATTAGGCCACAAGGACTCTACCGTCAGGAAAGGGTTAATGTTGTTATCATGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667826.1 |
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| CDS CCA 72 bp | AAGGACCTCGCGCCTCCCCGCCGGGCTCCGACCGCCTaGGTTCGGTGCGGGACGGCCCAGGCCGCCAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: KDLAPPRRAPTA*VRCGTAQAART Trigger: GGTCCTGGCGGCCTGGGCCGTCCCGCACCGAACCCAGGCGGTCGGAGCCCGGCGGGGAGGCGCGAGGTCCTT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397841.5 ENST00000615847.2 |
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| CDS TCA 72 bp | CCGCGTCCTCCGGTCTGTTTCTCCCAGGTGCGTCGGTaGAAGGCGGAGCGCCGCCACCCTACACCCGCGACC | + |
|
Preference number: 6 (lower is better) Translates to: PRPPVCFSQVRR*KAERRHPTPAT Trigger: GGTCGCGGGTGTAGGGTGGCGGCGCTCCGCCTTTCACCGACGCACCTGGGAGAAACAGACCGGAGGACGCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654166.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS GCA 72 bp | CGCGCCACCCGCGTCCTCCGGTCTGTTTCTCCCAGGTaGGTCGGTGAAAGGCGGAGCGCCGCCACCCTACAC | + |
|
Preference number: 6 (lower is better) Translates to: RATRVLRSVSPR*VGERRSAATLH Trigger: GTGTAGGGTGGCGGCGCTCCGCCTTTCACCGACGCACCTGGGAGAAACAGACCGGAGGACGCGGGTGGCGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000397841.5 ENST00000654166.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS TCA 72 bp | GCCGCTCACTGGGACATCTCGGTGCAGGGAAAGGGCTaGAGCTGGCGCAGCCACGGCAGCATCCCCTCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: AAHWDISVQGKG*SWRSHGSIPSR Trigger: ACGAGAGGGGATGCTGCCGTGGCTGCGCCAGCTTCAGCCCTTTCCCTGCACCGAGATGTCCCAGTGAGCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000330551.3 ENST00000397841.5 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS CCA 72 bp | CTGGCGCTGTGTGGCTCTGGACCTAGTCCTTGGGCTTaGGCTGGCACCCAGGGCCTGGGCTTGAGACAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LALCGSGPSPWA*AGTQGLGLRQL Trigger: CAGCTGTCTCAAGCCCAGGCCCTGGGTGCCAGCCCAAGCCCAAGGACTAGGTCCAGAGCCACACAGCGCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS GCA 72 bp | GGACTCAGAGCTTCTGTCCAGCAGAGGCCCCTGATGTaGAGCTGCACCGAGACACCCAGGCAGGGCGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: GLRASVQQRPLM*SCTETPRQGVT Trigger: GGTGACGCCCTGCCTGGGTGTCTCGGTGCAGCTGCACATCAGGGGCCTCTGCTGGACAGAAGCTCTGAGTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000330551.3 ENST00000397841.5 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS CCA 72 bp | CATCCCCTCTCGTGGCAGTGCTCCAGCTCCAGCGCCTaGGGGCCAAGTGTGGACTCAGAGCTTCTGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HPLSWQCSSSSA*GPSVDSELLSS Trigger: GCTGGACAGAAGCTCTGAGTCCACACTTGGCCCCCAGGCGCTGGAGCTGGAGCACTGCCACGAGAGGGGATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000330551.3 ENST00000397841.5 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 72 bp | CACCCCCACCCTAGGCCCAGAGCTCACGGAGAGAGCTaGGCCTCTCGGGGTGACTACATAGTTCCCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: HPHPRPRAHGES*ASRGDYIVPCW Trigger: CCAGCAGGGAACTATGTAGTCACCCCGAGAGGCCCAGCTCTCTCCGTGAGCTCTGGGCCTAGGGTGGGGGTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 72 bp | CAGCATCCCCTCTCGTGGCAGTGCAGCTCCAGCGCCTaGGGGCCAAGTGTGGACTCAGAGCTTCTGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QHPLSWQCSSSA*GPSVDSELLSS Trigger: GCTGGACAGAAGCTCTGAGTCCACACTTGGCCCCCAGGCGCTGGAGCTGCACTGCCACGAGAGGGGATGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664358.1 |
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| CDS CAA 72 bp | CGGGCTTGGGTCCCCCACGATCTAGACAGAAACTCGTaGTTTCTCGTGCTCCGCGCCACCCGCGTCCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RAWVPHDLDRNS*FLVLRATRVLR Trigger: CCGGAGGACGCGGGTGGCGCGGAGCACGAGAAACAACGAGTTTCTGTCTAGATCGTGGGGGACCCAAGCCCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000397841.5 ENST00000654166.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS TCA 72 bp | TGGCCTGCAGGATCCTCACGCGTGCCGCTTCGGTCCTaGTGGGCAGGACGCAGGTCTCTCACTAGACCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: WPAGSSRVPLRS*WAGRRSLTRPV Trigger: CACTGGTCTAGTGAGAGACCTGCGTCCTGCCCATCAGGACCGAAGCGGCACGCGTGAGGATCCTGCAGGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000330551.3 ENST00000397841.5 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS GCA 72 bp | TCGCTGTTGTCTCTTGGCCTGCAGGATCCTCACGCGTaGCGCTTCGGTCCTGATGGGCAGGACGCAGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SLLSLGLQDPHA*RFGPDGQDAGL Trigger: GAGACCTGCGTCCTGCCCATCAGGACCGAAGCGGCACGCGTGAGGATCCTGCAGGCCAAGAGACAACAGCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000330551.3 ENST00000397841.5 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS CAA 90 bp | GGGCCTGGCTGGCTGACACTTTGCATGGCTCCTGGAGAAGAGGGATaGAGTGGAGTCCACGGGTCATGGCCACGTCCTGGGTGCTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GPGWLTLCMAPGEEG*SGVHGSWPRPGCCL Trigger: GAGGCAGCACCCAGGACGTGGCCATGACCCGTGGACTCCACTCAATCCCTCTTCTCCAGGAGCCATGCAAAGTGTCAGCCAGCCAGGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CAA 90 bp | ACGCAACCCCGGGCTTGGGTCCCCCACGATCTAGACAGAAACTCGTaGTTTCTCGTGCTCCGCGCCACCCGCGTCCTCCGGTCTGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TQPRAWVPHDLDRNS*FLVLRATRVLRSVS Trigger: AGAAACAGACCGGAGGACGCGGGTGGCGCGGAGCACGAGAAACAACGAGTTTCTGTCTAGATCGTGGGGGACCCAAGCCCGGGGTTGCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000397841.5 ENST00000654166.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS GCA 72 bp | CTCCCTGCTATCGAACACCGGACATGGGTCGTGTGCTaGACCTGGCAGTTGCAGGACCGACACCCGCAATGC | + |
|
Preference number: 6 (lower is better) Translates to: LPAIEHRTWVVC*TWQLQDRHPQC Trigger: GCATTGCGGGTGTCGGTCCTGCAACTGCCAGGTGCAGCACACGACCCATGTCCGGTGTTCGATAGCAGGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS GCA 72 bp | TGGCTCCCTGCTATCGAACACCGGACATGGGTCGTGTaGTGCACCTGGCAGTTGCAGGACCGACACCCGCAA | + |
|
Preference number: 6 (lower is better) Translates to: WLPAIEHRTWVV*CTWQLQDRHPQ Trigger: TTGCGGGTGTCGGTCCTGCAACTGCCAGGTGCAGCACACGACCCATGTCCGGTGTTCGATAGCAGGGAGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 72 bp | GGGCTTATGAAACTGCAGGTGGCTGAGTCCTTGCCATaGGGTCTCTCCTTCAGCAGGTCTGGGTGGGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GLMKLQVAESLP*GLSFSRSGWGR Trigger: CCGGCCCCACCCAGACCTGCTGAAGGAGAGACCCCATGGCAAGGACTCAGCCACCTGCAGTTTCATAAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 72 bp | GCCAGGTCATGGCTCCCTGCTATCGAACACCGGACATaGGTCGTGTGCTGCACCTGGCAGTTGCAGGACCGA | + |
|
Preference number: 6 (lower is better) Translates to: ARSWLPAIEHRT*VVCCTWQLQDR Trigger: TCGGTCCTGCAACTGCCAGGTGCAGCACACGACCCATGTCCGGTGTTCGATAGCAGGGAGCCATGACCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 72 bp | GGGTGCCCCTTTGAGCGTGGAATCGTTGCCAGGTCATaGCTCCCTGCTATCGAACACCGGACATGGGTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: GCPFERGIVARS*LPAIEHRTWVV Trigger: CACGACCCATGTCCGGTGTTCGATAGCAGGGAGCCATGACCTGGCAACGATTCCACGCTCAAAGGGGCACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CAA 72 bp | AGGAGCCTTCTGGCCACTCCTTGGGCTGTGAGTGGCTaGTGCGGTCATCTGTCCATCTCTCAGCTGGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: RSLLATPWAVSG*CGHLSISQLGE Trigger: CTCGCCCAGCTGAGAGATGGACAGATGACCGCACAAGCCACTCACAGCCCAAGGAGTGGCCAGAAGGCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657006.1 |
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| CDS TCA 72 bp | CAGGCAGGCAGGAGCCCATGGGGGAGGGTTGATCTTTaGTCTTCCTCTGATGGCCCAACGGGAACTGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: QAGRSPWGRVDL*SSSDGPTGTVS Trigger: GCTCACAGTTCCCGTTGGGCCATCAGAGGAAGATCAAAGATCAACCCTCCCCCATGGGCTCCTGCCTGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000330551.3 ENST00000397841.5 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS TCA 72 bp | CTCCCTGTCACAGACATGAGCCCTGGAGATCTGGAATaGGGCAGATGTGCCCAGGGAAAGCTGATCCGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LPVTDMSPGDLE*GRCAQGKLIRP Trigger: GGGGCGGATCAGCTTTCCCTGGGCACATCTGCCTCATTCCAGATCTCCAGGGCTCATGTCTGTGACAGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS GCA 72 bp | GGGACTGGGGTTTGTAATCGCTGTTGTCTCTTGGCCTaGAGGATCCTCACGCGTGCCGCTTCGGTCCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: GTGVCNRCCLLA*RILTRAASVLM Trigger: CATCAGGACCGAAGCGGCACGCGTGAGGATCCTGCAGGCCAAGAGACAACAGCGATTACAAACCCCAGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000330551.3 ENST00000397841.5 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS CCA 72 bp | GACACTTTGCATGGCTCCTGGAGAAGAGGGATTGAGTaGAGTCCACGGGTCATGGCCACGTCCTGGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DTLHGSWRRGIE*SPRVMATSWVL Trigger: CAGCACCCAGGACGTGGCCATGACCCGTGGACTCCACTCAATCCCTCTTCTCCAGGAGCCATGCAAAGTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 72 bp | GCTATCGAACACCGGACATGGGTCGTGTGCTGCACCTaGCAGTTGCAGGACCGACACCCGCAATGCCTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: AIEHRTWVVCCT*QLQDRHPQCLK Trigger: CTTAAGGCATTGCGGGTGTCGGTCCTGCAACTGCCAGGTGCAGCACACGACCCATGTCCGGTGTTCGATAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS TCA 72 bp | CTGTCTTACTCTGTTTTGTGCTGCTTCTCGAGAGGCTaGGGCGGGAGGATCGCTCGAGTCCTGGACGTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSYSVLCCFSRG*GGRIARVLDVE Trigger: CTCGACGTCCAGGACTCGAGCGATCCTCCCGCCTCAGCCTCTCGAGAAGCAGCACAAAACAGAGTAAGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330551.3 |
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| CDS TCA 72 bp | AGGAACCCACTGGGGGCTTATGAAACTGCAGGTGGCTaGGTCCTTGCCATGGGGTCTCTCCTTCAGCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RNPLGAYETAGG*VLAMGSLLQQV Trigger: GACCTGCTGAAGGAGAGACCCCATGGCAAGGACTCAGCCACCTGCAGTTTCATAAGCCCCCAGTGGGTTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS GCA 72 bp | ATGACTGCCTTCCAGGGGCCTGGCTGGCTGACACTTTaGATGGCTCCTGGAGAAGAGGGATTGAGTGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: MTAFQGPGWLTL*MAPGEEGLSGV Trigger: GACTCCACTCAATCCCTCTTCTCCAGGAGCCATGCAAAGTGTCAGCCAGCCAGGCCCCTGGAAGGCAGTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS GCA 72 bp | AGGACCGACACCCGCAATGCCTTAAGAGGTGATGACTaGCTTCCAGGGGCCTGGCTGGCTGACACTTTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RTDTRNALRGDD*LPGAWLADTLH Trigger: ATGCAAAGTGTCAGCCAGCCAGGCCCCTGGAAGGCAGTCATCACCTCTTAAGGCATTGCGGGTGTCGGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS GCA 72 bp | AACACCGGACATGGGTCGTGTGCTGCACCTGGCAGTTaGAGGACCGACACCCGCAATGCCTTAAGAGGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: NTGHGSCAAPGS*RTDTRNALRGD Trigger: ATCACCTCTTAAGGCATTGCGGGTGTCGGTCCTGCAACTGCCAGGTGCAGCACACGACCCATGTCCGGTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS GCA 72 bp | CCCGTTCCCAGCACGGGACCCAGCCCGTTACCTCGCTaGTATGTTTCCCACGTAAACGGAGCAATACCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: PVPSTGPSPLPR*YVSHVNGAIPN Trigger: ATTGGGTATTGCTCCGTTTACGTGGGAAACATAGCAGCGAGGTAACGGGCTGGGTCCCGTGCTGGGAACGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS GCA 72 bp | GAGAGCTGGGCCTCTCGGGGTGACTACATAGTTCCCTaGTGGATCTTAGGTCTTGTCCTTGGGCAGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ESWASRGDYIVP*WILGLVLGQLC Trigger: GCAGAGCTGCCCAAGGACAAGACCTAAGATCCAGCAGGGAACTATGTAGTCACCCCGAGAGGCCCAGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 72 bp | TACCTGGCTGGGCCCGGACTTGGCAGCCTTCCTTCATaGCCCTCAGCCACAGCCTGTTCCATAGTTTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: YLAGPGLGSLPS*PSATACSIVCS Trigger: AGAACAAACTATGGAACAGGCTGTGGCTGAGGGCCATGAAGGAAGGCTGCCAAGTCCGGGCCCAGCCAGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS CCA 72 bp | CAGCTGGGCGAGAAACTTGATGTCCTTTCTGAGAGGTaGCCCTGGCTCTGCCTGGGACCTGCTACTCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: QLGEKLDVLSER*PWLCLGPATLL Trigger: GAGAAGAGTAGCAGGTCCCAGGCAGAGCCAGGGCCACCTCTCAGAAAGGACATCAAGTTTCTCGCCCAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS CCA 72 bp | CCACAGGAGGAAGCGAGTGAGAGAAGCCAACTGGGATaGACCCATCATGTAGGGGGAACAGTGCGCGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PQEEASERSQLG*THHVGGTVRAE Trigger: TTCTGCGCGCACTGTTCCCCCTACATGATGGGTCCATCCCAGTTGGCTTCTCTCACTCGCTTCCTCCTGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CAA 90 bp | CCTGGCTCTGCCTGGGACCTGCTACTCTTCTCCAAAGTGCATTTTTaGTGGGTGGGTTTTCACTGTGGGTCCTGGGCAGGTGAGTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGSAWDLLLFSKVHF*WVGFHCGSWAGECW Trigger: CCAGCACTCACCTGCCCAGGACCCACAGTGAAAACCCACCCACAAAAAATGCACTTTGGAGAAGAGTAGCAGGTCCCAGGCAGAGCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS TCA 72 bp | GACACCTGGACAGGCTTCTCCACAGGAGGAAGCGAGTaGGAGAAGCCAACTGGGATGGACCCATCATGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: DTWTGFSTGGSE*EKPTGMDPSCR Trigger: CCTACATGATGGGTCCATCCCAGTTGGCTTCTCTCACTCGCTTCCTCCTGTGGAGAAGCCTGTCCAGGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 72 bp | TGGAGACAGGTTCCTGCCAGTTCAGCCTCTAACCGGTaGTCTTCATGCCTAGGAACCCACTGGGGGCTTATG | + |
|
Preference number: 6 (lower is better) Translates to: WRQVPASSASNR*SSCLGTHWGLM Trigger: CATAAGCCCCCAGTGGGTTCCTAGGCATGAAGACCACCGGTTAGAGGCTGAACTGGCAGGAACCTGTCTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CAA 90 bp | CCTGGGCTTGAGACAGCTGTGACGCAGGCAAGCCATTTACCCCGTTaGTGGGGACATTACATCTTCCTAGCTTGGAACACACAGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PGLETAVTQASHLPR*WGHYIFLAWNTQAA Trigger: GGCTGCCTGTGTGTTCCAAGCTAGGAAGATGTAATGTCCCCACAAACGGGGTAAATGGCTTGCCTGCGTCACAGCTGTCTCAAGCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS TCA 72 bp | TGCTGGATCTTAGGTCTTGTCCTTGGGCAGCTCTGCTaGGACCTCTATGCCTGTTCCAGGCTGCACCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: CWILGLVLGQLC*DLYACSRLHQG Trigger: ACCTTGGTGCAGCCTGGAACAGGCATAGAGGTCTCAGCAGAGCTGCCCAAGGACAAGACCTAAGATCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS GCA 72 bp | GTTCCTGCCAGTTCAGCCTCTAACCGGTGGTCTTCATaGCTAGGAACCCACTGGGGGCTTATGAAACTGCAG | + |
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Preference number: 6 (lower is better) Translates to: VPASSASNRWSS*LGTHWGLMKLQ Trigger: CTGCAGTTTCATAAGCCCCCAGTGGGTTCCTAGGCATGAAGACCACCGGTTAGAGGCTGAACTGGCAGGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS GCA 72 bp | AGCAAAACATTAATAAAAATTAGCCGGGCGTGGCGGTaGCCACCGGTGGTCCCACCTTCTCGAGAGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SKTLIKISRAWR*PPVVPPSREAE Trigger: CTCAGCCTCTCGAGAAGGTGGGACCACCGGTGGGCACCGCCACGCCCGGCTAATTTTTATTAATGTTTTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000654166.1 ENST00000658179.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 72 bp | AATGCCTTAAGAGGTGATGACTGCCTTCCAGGGGCCTaGCTGGCTGACACTTTGCATGGCTCCTGGAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: NALRGDDCLPGA*LADTLHGSWRR Trigger: TCTTCTCCAGGAGCCATGCAAAGTGTCAGCCAGCCAGGCCCCTGGAAGGCAGTCATCACCTCTTAAGGCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 72 bp | GGCTCTAGCAAAACATTAATAAAAATTAGCCGGGCGTaGCGGTGCCCACCGGTGGTCCCACCTTCTCGAGAG | + |
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Preference number: 6 (lower is better) Translates to: GSSKTLIKISRA*RCPPVVPPSRE Trigger: CTCTCGAGAAGGTGGGACCACCGGTGGGCACCGCCACGCCCGGCTAATTTTTATTAATGTTTTGCTAGAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000654166.1 ENST00000658179.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 72 bp | GGCGAGAAACTTGATGTCCTTTCTGAGAGGTGGCCCTaGCTCTGCCTGGGACCTGCTACTCTTCTCCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: GEKLDVLSERWP*LCLGPATLLQS Trigger: ACTTTGGAGAAGAGTAGCAGGTCCCAGGCAGAGCCAGGGCCACCTCTCAGAAAGGACATCAAGTTTCTCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS CCA 72 bp | GGAGACTGGGAAGTCCAAGACAGAAGAGCTAGCAACTaGCAAGGGCCTTCTTGCTGTGTCATCCCATGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GDWEVQDRRASN*QGPSCCVIPWW Trigger: CCACCATGGGATGACACAGCAAGAAGGCCCTTGCCAGTTGCTAGCTCTTCTGTCTTGGACTTCCCAGTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667826.1 |
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| CDS CCA 72 bp | AGCAACTGGCAAGGGCCTTCTTGCTGTGTCATCCCATaGTGGAACAGCAAAGAGAGGGCAAGAGTGTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: SNWQGPSCCVIP*WNSKERARVCQ Trigger: TTGGCACACTCTTGCCCTCTCTTTGCTGTTCCACCATGGGATGACACAGCAAGAAGGCCCTTGCCAGTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667826.1 |
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| CDS CAA 72 bp | GCCTGGGACCTGCTACTCTTCTCCAAAGTGCATTTTTaGTGGGTGGGTTTTCACTGTGGGTCCTGGGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: AWDLLLFSKVHF*WVGFHCGSWAG Trigger: ACCTGCCCAGGACCCACAGTGAAAACCCACCCACAAAAAATGCACTTTGGAGAAGAGTAGCAGGTCCCAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS GCA 72 bp | CAAGACAGAAGAGCTAGCAACTGGCAAGGGCCTTCTTaGTGTGTCATCCCATGGTGGAACAGCAAAGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: QDRRASNWQGPS*CVIPWWNSKER Trigger: CCTCTCTTTGCTGTTCCACCATGGGATGACACAGCAAGAAGGCCCTTGCCAGTTGCTAGCTCTTCTGTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667826.1 |
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| CDS CCA 72 bp | GAATATATCCTAGAGTCCATCACCTTGGGCTGTGAGTaGCTTGTGCGGTCATCTGTCCATCTCTCAGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: EYILESITLGCE*LVRSSVHLSAG Trigger: CCCAGCTGAGAGATGGACAGATGACCGCACAAGCCACTCACAGCCCAAGGTGATGGACTCTAGGATATATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654166.1 ENST00000658179.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS CCA 72 bp | AACTGGCAAGGGCCTTCTTGCTGTGTCATCCCATGGTaGAACAGCAAAGAGAGGGCAAGAGTGTGCCAAAAG | + |
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Preference number: 6 (lower is better) Translates to: NWQGPSCCVIPW*NSKERARVCQK Trigger: CTTTTGGCACACTCTTGCCCTCTCTTTGCTGTTCCACCATGGGATGACACAGCAAGAAGGCCCTTGCCAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667826.1 |
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| CDS CAA 90 bp | TGGCAGCCTTCCTTCATGGCCCTCAGCCACAGCCTGTTCCATAGTTaGTTCTCGATGTGTCAGCTTTGTGTTCCCATGAGAACAATGGGC | + |
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Preference number: 6 (lower is better) Translates to: WQPSFMALSHSLFHS*FSMCQLCVPMRTMG Trigger: GCCCATTGTTCTCATGGGAACACAAAGCTGACACATCGAGAACAAACTATGGAACAGGCTGTGGCTGAGGGCCATGAAGGAAGGCTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS CAA 90 bp | TCAAGCCAGTTGCTCAGCCTTGAATATATCCTAGAGTCCATCACCTaGGGCTGTGAGTGGCTTGTGCGGTCATCTGTCCATCTCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SSQLLSLEYILESIT*GCEWLVRSSVHLSA Trigger: AGCTGAGAGATGGACAGATGACCGCACAAGCCACTCACAGCCCAAGGTGATGGACTCTAGGATATATTCAAGGCTGAGCAACTGGCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654166.1 ENST00000658179.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS CCA 72 bp | ACAGCTGTGACGCAGGCAAGCCATTTACCCCGTTTGTaGGGACATTACATCTTCCTAGCTTGGAACACACAG | + |
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Preference number: 6 (lower is better) Translates to: TAVTQASHLPRL*GHYIFLAWNTQ Trigger: CTGTGTGTTCCAAGCTAGGAAGATGTAATGTCCCCACAAACGGGGTAAATGGCTTGCCTGCGTCACAGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CAA 72 bp | GAGACAGCTGTGACGCAGGCAAGCCATTTACCCCGTTaGTGGGGACATTACATCTTCCTAGCTTGGAACACA | + |
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Preference number: 6 (lower is better) Translates to: ETAVTQASHLPR*WGHYIFLAWNT Trigger: TGTGTTCCAAGCTAGGAAGATGTAATGTCCCCACAAACGGGGTAAATGGCTTGCCTGCGTCACAGCTGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS TCA 72 bp | AGCACTTTCACCTCAAGAGTCGCTAGGCTCAGATGCTaGATGCACCCTGAAGGAACTCTAAAGATACCAGCC | + |
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Preference number: 6 (lower is better) Translates to: STFTSRVARLRC*MHPEGTLKIPA Trigger: GGCTGGTATCTTTAGAGTTCCTTCAGGGTGCATTCAGCATCTGAGCCTAGCGACTCTTGAGGTGAAAGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654166.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS CAA 72 bp | TGTCAGCTTTGTGTTCCCATGAGAACAATGGGCTCCTaGAGGACAGGCATTGCATCGTACCTGTGGTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: CQLCVPMRTMGS*RTGIASYLWSL Trigger: AAGAGACCACAGGTACGATGCAATGCCTGTCCTCAAGGAGCCCATTGTTCTCATGGGAACACAAAGCTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS CAA 72 bp | TCCTTCATGGCCCTCAGCCACAGCCTGTTCCATAGTTaGTTCTCGATGTGTCAGCTTTGTGTTCCCATGAGA | + |
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Preference number: 6 (lower is better) Translates to: SFMALSHSLFHS*FSMCQLCVPMR Trigger: TCTCATGGGAACACAAAGCTGACACATCGAGAACAAACTATGGAACAGGCTGTGGCTGAGGGCCATGAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS CAA 72 bp | TTGCTCAGCCTTGAATATATCCTAGAGTCCATCACCTaGGGCTGTGAGTGGCTTGTGCGGTCATCTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LLSLEYILESIT*GCEWLVRSSVH Trigger: ATGGACAGATGACCGCACAAGCCACTCACAGCCCAAGGTGATGGACTCTAGGATATATTCAAGGCTGAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654166.1 ENST00000658179.1 ENST00000663249.1 ENST00000664358.1 ENST00000667826.1 |
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| CDS TCA 72 bp | CTCTACTGTGGTCCTTCTGCAGTCCCACCCCATACATaGATGGCTTCTTTTGAAGCTTCCTCCTTTGTACAG | + |
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Preference number: 6 (lower is better) Translates to: LYCGPSAVPPHT*MASFEASSFVQ Trigger: CTGTACAAAGGAGGAAGCTTCAAAAGAAGCCATTCATGTATGGGGTGGGACTGCAGAAGGACCACAGTAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330551.3 ENST00000667826.1 |
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| CDS TCA 72 bp | TTCTGGCCACTCCTGATTAACACAGTTCCTTATTGGTaGGGGATTCTCTACTGTGGTCCTTCTGCAGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: FWPLLINTVPYW*GILYCGPSAVP Trigger: TGGGACTGCAGAAGGACCACAGTAGAGAATCCCTCACCAATAAGGAACTGTGTTAATCAGGAGTGGCCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330551.3 ENST00000667826.1 |
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| CDS TCA 72 bp | ACCTCTATGCCTGTTCCAGGCTGCACCAAGGTTTTGTaGCTATTGACCCTTGACTTTGAGTTGGGAGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: TSMPVPGCTKVL*LLTLDFELGVA Trigger: AGCAACTCCCAACTCAAAGTCAAGGGTCAATAGTCACAAAACCTTGGTGCAGCCTGGAACAGGCATAGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 72 bp | TTACCCCGTTTGTGGGGACATTACATCTTCCTAGCTTaGAACACACAGGCAGCCAGGGTTGTTATCCACATT | + |
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Preference number: 6 (lower is better) Translates to: LPRLWGHYIFLA*NTQAARVVIHI Trigger: AATGTGGATAACAACCCTGGCTGCCTGTGTGTTCCAAGCTAGGAAGATGTAATGTCCCCACAAACGGGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000397841.5 ENST00000615847.2 ENST00000654166.1 ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS TCA 72 bp | TGCCTGTTCCAGGCTGCACCAAGGTTTTGTGACTATTaGCCCTTGACTTTGAGTTGGGAGTTGCTGTATTTT | + |
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Preference number: 6 (lower is better) Translates to: CLFQAAPRFCDY*PLTLSWELLYF Trigger: AAAATACAGCAACTCCCAACTCAAAGTCAAGGGTCAATAGTCACAAAACCTTGGTGCAGCCTGGAACAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CCA 72 bp | TACAATTCCAGGGACAAGAGCGATGCATGTGAGGTGTaGCAAATCTCACTGTTCAACTGGAGAAATCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: YNSRDKSDACEV*QISLFNWRNQR Trigger: TCTCTGATTTCTCCAGTTGAACAGTGAGATTTGCCACACCTCACATGCATCGCTCTTGTCCCTGGAATTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000657006.1 ENST00000658179.1 ENST00000660377.1 ENST00000663249.1 ENST00000667826.1 |
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| CDS CAA 72 bp | GATAACAACATTAACCCTTTCCTGACGGTAGAGTCCTaGTGGCCTAATCACCTCTTAAAGGTGCCACATCTT | + |
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Preference number: 6 (lower is better) Translates to: DNNINPFLTVES*WPNHLLKVPHL Trigger: AAGATGTGGCACCTTTAAGAGGTGATTAGGCCACAAGGACTCTACCGTCAGGAAAGGGTTAATGTTGTTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667826.1 |
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| CDS CAA 90 bp | CACTCCCATGATAACAACATTAACCCTTTCCTGACGGTAGAGTCCTaGTGGCCTAATCACCTCTTAAAGGTGCCACATCTTAATACTAGT | + |
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Preference number: 6 (lower is better) Translates to: HSHDNNINPFLTVES*WPNHLLKVPHLNTS Trigger: ACTAGTATTAAGATGTGGCACCTTTAAGAGGTGATTAGGCCACAAGGACTCTACCGTCAGGAAAGGGTTAATGTTGTTATCATGGGAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667826.1 |
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| CDS CCA 72 bp | AACAACATTAACCCTTTCCTGACGGTAGAGTCCTTGTaGCCTAATCACCTCTTAAAGGTGCCACATCTTAAT | + |
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Preference number: 6 (lower is better) Translates to: NNINPFLTVESL*PNHLLKVPHLN Trigger: ATTAAGATGTGGCACCTTTAAGAGGTGATTAGGCCACAAGGACTCTACCGTCAGGAAAGGGTTAATGTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667826.1 |
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| CDS TCA 72 bp | GAATGGCTTCTTTTGAAGCTTCCTCCTTTGTACAGGTaGGTATCTTTGTCACTGTCTTACTCTGTTTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: EWLLLKLPPLYR*VSLSLSYSVLC Trigger: GCACAAAACAGAGTAAGACAGTGACAAAGATACTCACCTGTACAAAGGAGGAAGCTTCAAAAGAAGCCATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330551.3 ENST00000667826.1 |
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