Pregenerated sensors for LINC01545 (Homo sapiens)

Ensembl gene IDs: ENSG00000204904

Ensembl transcript IDs: ENST00000377879.7, ENST00000618037.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	ATGCTGGGGCAGAGTTCAAATGAAAAAGCAGTCAACTTCTTGCTTTaGGCTTGCAGAGGAAAGTTAGTCACTCGGTCCCTCTCAGATCTG	+
Preference number: 5 (lower is better) Translates to: MLGQSSNEKAVNFLL*ACRGKLVTRSLSDL Trigger: CAGATCTGAGAGGGACCGAGTGACTAACTTTCCTCTGCAAGCTCAAAGCAAGAAGTTGACTGCTTTTTCATTTGAACTCTGCCCCAGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377879.7 ENST00000618037.1
CDS TCA 90 bp	ATTCAATTAGGAAACAAGTTGCATAAACCCAGAGTGGTGATTTGTTaGTGCTGGGGCAGAGTTCAAATGAAAAAGCAGTCAACTTCTTGC	+
Preference number: 5 (lower is better) Translates to: IQLGNKLHKPRVVIC*CWGRVQMKKQSTSC Trigger: GCAAGAAGTTGACTGCTTTTTCATTTGAACTCTGCCCCAGCATCAACAAATCACCACTCTGGGTTTATGCAACTTGTTTCCTAATTGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377879.7 ENST00000618037.1
CDS CAA 90 bp	ATCCAGATTAACATTCCTTATCAGCCTCCTGATTGGGGTCCTCACTaGGGATCTTTTCATCCTGTACATCCTATACACTGGGAGGCTGAG	+
Preference number: 6 (lower is better) Translates to: IQINIPYQPPDWGPH*GSFHPVHPIHWEAE Trigger: CTCAGCCTCCCAGTGTATAGGATGTACAGGATGAAAAGATCCCAAGTGAGGACCCCAATCAGGAGGCTGATAAGGAATGTTAATCTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377879.7
CDS CCA 72 bp	ACATTCCTTATCAGCCTCCTGATTGGGGTCCTCACTTaGGATCTTTTCATCCTGTACATCCTATACACTGGG	+
Preference number: 6 (lower is better) Translates to: TFLISLLIGVLT*DLFILYILYTG Trigger: CCCAGTGTATAGGATGTACAGGATGAAAAGATCCCAAGTGAGGACCCCAATCAGGAGGCTGATAAGGAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377879.7
CDS CCA 72 bp	ACATTCCTTATCAGCCTCCTGATTGGGGTCCTCACTTaGGATCTTTTCATCCTGTACATCCTATACACTGCA	+
Preference number: 6 (lower is better) Translates to: TFLISLLIGVLT*DLFILYILYTA Trigger: TGCAGTGTATAGGATGTACAGGATGAAAAGATCCCAAGTGAGGACCCCAATCAGGAGGCTGATAAGGAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618037.1
CDS CAA 72 bp	AACATTCCTTATCAGCCTCCTGATTGGGGTCCTCACTaGGGATCTTTTCATCCTGTACATCCTATACACTGG	+
Preference number: 6 (lower is better) Translates to: NIPYQPPDWGPH*GSFHPVHPIHW Trigger: CCAGTGTATAGGATGTACAGGATGAAAAGATCCCAAGTGAGGACCCCAATCAGGAGGCTGATAAGGAATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377879.7
CDS CAA 72 bp	AACATTCCTTATCAGCCTCCTGATTGGGGTCCTCACTaGGGATCTTTTCATCCTGTACATCCTATACACTGC	+
Preference number: 6 (lower is better) Translates to: NIPYQPPDWGPH*GSFHPVHPIHC Trigger: GCAGTGTATAGGATGTACAGGATGAAAAGATCCCAAGTGAGGACCCCAATCAGGAGGCTGATAAGGAATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618037.1
CDS CCA 72 bp	CCAATCCAGATTAACATTCCTTATCAGCCTCCTGATTaGGGTCCTCACTTGGGATCTTTTCATCCTGTACAT	+
Preference number: 6 (lower is better) Translates to: PIQINIPYQPPD*GPHLGSFHPVH Trigger: ATGTACAGGATGAAAAGATCCCAAGTGAGGACCCCAATCAGGAGGCTGATAAGGAATGTTAATCTGGATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377879.7 ENST00000618037.1

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