Pregenerated sensors for LINC01539 (Homo sapiens)
Ensembl gene IDs: ENSG00000267712Ensembl transcript IDs: ENST00000587904.5, ENST00000589293.6, ENST00000589447.1, ENST00000590484.2, ENST00000591974.5, ENST00000593282.5, ENST00000653524.1, ENST00000653652.1, ENST00000654780.1, ENST00000654820.1, ENST00000655121.1, ENST00000655648.1, ENST00000656570.1, ENST00000656913.1, ENST00000657412.1, ENST00000660365.1, ENST00000660685.1, ENST00000661430.1, ENST00000662269.1, ENST00000662324.1, ENST00000662735.1, ENST00000663100.1, ENST00000664250.1, ENST00000664576.1, ENST00000664842.1, ENST00000665019.1, ENST00000665833.1, ENST00000666910.1, ENST00000668386.1, ENST00000668690.1, ENST00000669575.1, ENST00000670316.1, ENST00000670613.1, ENST00000671257.1, ENST00000671420.1, ENST00000671483.1, ENST00000671593.1
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCCCCATTGACGCATGTGGCACCATTACAGCCCACGGCTGAAAGCTaGCGTGAAAGGCTCCCTCTGAAAGCTGGAGCACAGTCTGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: APLTHVAPLQPTAES*RERLPLKAGAQSGV Trigger: CACCCCAGACTGTGCTCCAGCTTTCAGAGGGAGCCTTTCACGCCAGCTTTCAGCCGTGGGCTGTAATGGTGCCACATGCGTCAATGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000665019.1 ENST00000668690.1 |
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| CDS GCA 90 bp | CCTCAAATAGCTCCTCTGATACGTGGTTCAAGTCCGGAGACAACTTaGATGGCTTGTCCAGGCATGCCTGAGCCCAGCCTTGACCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: PQIAPLIRGSSPETT*MACPGMPEPSLDPQ Trigger: CTGGGGGTCAAGGCTGGGCTCAGGCATGCCTGGACAAGCCATGCAAGTTGTCTCCGGACTTGAACCACGTATCAGAGGAGCTATTTGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 26 transcripts: ENST00000587904.5 ENST00000589293.6 ENST00000591974.5 ENST00000653524.1 ENST00000653652.1 ENST00000654780.1 ENST00000654820.1 ENST00000655121.1 ENST00000655648.1 ENST00000656570.1 ENST00000656913.1 ENST00000657412.1 ENST00000660365.1 ENST00000661430.1 ENST00000662269.1 ENST00000662735.1 ENST00000663100.1 ENST00000664250.1 ENST00000664576.1 ENST00000664842.1 ENST00000665833.1 ENST00000666910.1 ENST00000670613.1 ENST00000671257.1 ENST00000671420.1 ENST00000671593.1 |
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| CDS CCA 90 bp | GTGACATCGAAGGAAGCAGCAGCCACTCTAGGAAGCTCCGCAAGGTaGGAACATCTCCACTCGACTCCATTCACTCAGCTTAGCCTCATC | + |
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Preference number: 5 (lower is better) Translates to: VTSKEAAATLGSSAR*EHLHSTPFTQLSLI Trigger: GATGAGGCTAAGCTGAGTGAATGGAGTCGAGTGGAGATGTTCCCACCTTGCGGAGCTTCCTAGAGTGGCTGCTGCTTCCTTCGATGTCAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665019.1 ENST00000668690.1 |
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| CDS TCA 90 bp | GGGGCTGCTAAGCAGGGGCTGTCTGTTTGTAAAGCAGGTGGAGGTTaGTGGATCACCTTTCCTTCTTTGTCTGGCATCTCCAGGAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: GAAKQGLSVCKAGGG*WITFPSLSGISRSF Trigger: GAAGCTCCTGGAGATGCCAGACAAAGAAGGAAAGGTGATCCATCAACCTCCACCTGCTTTACAAACAGACAGCCCCTGCTTAGCAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000665019.1 ENST00000668690.1 |
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| CDS CCA 90 bp | AGGCTCCCTCTGAAAGCTGGAGCACAGTCTGGGGTGCCTTATTGTTaGAGGATTTGCCCAATTTGTGACATCGAAGGAAGCAGCAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: RLPLKAGAQSGVPYC*RICPICDIEGSSSH Trigger: GTGGCTGCTGCTTCCTTCGATGTCACAAATTGGGCAAATCCTCCAACAATAAGGCACCCCAGACTGTGCTCCAGCTTTCAGAGGGAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665019.1 ENST00000668690.1 |
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| CDS GCA 90 bp | GGTGCCATGCTCTTGAACTTCCCAGACTCCAGATCTCTTTACTGCTaGCCTGCACACCAAGATCAGAGTTGGACTGAGAAGTGGACCACT | + |
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Preference number: 5 (lower is better) Translates to: GAMLLNFPDSRSLYC*PAHQDQSWTEKWTT Trigger: AGTGGTCCACTTCTCAGTCCAACTCTGATCTTGGTGTGCAGGGCAGCAGTAAAGAGATCTGGAGTCTGGGAAGTTCAAGAGCATGGCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589447.1 ENST00000593282.5 |
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| CDS TCA 90 bp | ATGATGCAGAATGAAAGCCCTTGCCAGATGTTGGTGCCATGCTCTTaGACTTCCCAGACTCCAGATCTCTTTACTGCTGCCCTGCACACC | + |
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Preference number: 5 (lower is better) Translates to: MMQNESPCQMLVPCS*TSQTPDLFTAALHT Trigger: GGTGTGCAGGGCAGCAGTAAAGAGATCTGGAGTCTGGGAAGTTCAAGAGCATGGCACCAACATCTGGCAAGGGCTTTCATTCTGCATCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589447.1 ENST00000593282.5 |
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| CDS TCA 90 bp | TGTCTGGCATCTCCAGGAGCTTCTTCCTGTATCTTGCAAACCCTATaGGCCCCATTGTTCATAGGAAGAGGGTTGAAAGCCCTGTGGGTT | + |
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Preference number: 5 (lower is better) Translates to: CLASPGASSCILQTL*APLFIGRGLKALWV Trigger: AACCCACAGGGCTTTCAACCCTCTTCCTATGAACAATGGGGCTCATAGGGTTTGCAAGATACAGGAAGAAGCTCCTGGAGATGCCAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593282.5 ENST00000665019.1 ENST00000668690.1 |
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| CDS TCA 90 bp | ATGATGCAGAATGAAAGCCCTTGCCAGATGTTGGTGCCATGCTCTTaGACTTCCCAGACTCCAGATCATATCCTTGTACCAGCAGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: MMQNESPCQMLVPCS*TSQTPDHILVPAGE Trigger: CTCTCCTGCTGGTACAAGGATATGATCTGGAGTCTGGGAAGTTCAAGAGCATGGCACCAACATCTGGCAAGGGCTTTCATTCTGCATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000653652.1 ENST00000662735.1 ENST00000663100.1 ENST00000664576.1 ENST00000664842.1 ENST00000666910.1 ENST00000668690.1 ENST00000671593.1 |
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| CDS CCA 90 bp | TACCAGCAGGAGAGGGAGGTCATAGATTGGAACATGGGTTGTAGTTaGCTTCTGTTGCCATGGCCTAATTGTTCTGCTGGTCACTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: YQQEREVIDWNMGCS*LLLPWPNCSAGHFL Trigger: CAAGAAGTGACCAGCAGAACAATTAGGCCATGGCAACAGAAGCCAACTACAACCCATGTTCCAATCTATGACCTCCCTCTCCTGCTGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 32 transcripts: ENST00000587904.5 ENST00000589293.6 ENST00000590484.2 ENST00000591974.5 ENST00000653524.1 ENST00000653652.1 ENST00000654820.1 ENST00000655648.1 ENST00000656570.1 ENST00000656913.1 ENST00000657412.1 ENST00000660365.1 ENST00000660685.1 ENST00000661430.1 ENST00000662269.1 ENST00000662324.1 ENST00000662735.1 ENST00000663100.1 ENST00000664250.1 ENST00000664576.1 ENST00000664842.1 ENST00000665019.1 ENST00000665833.1 ENST00000666910.1 ENST00000668386.1 ENST00000668690.1 ENST00000669575.1 ENST00000670613.1 ENST00000671257.1 ENST00000671420.1 ENST00000671483.1 ENST00000671593.1 |
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| CDS CCA 90 bp | CTCTTGCCCATATCCTTGTACCAGCAGGAGAGGGAGGTCATAGATTaGAACATGGGTTGTAGTTGGCTTCTGTTGCCATGGCCTAATTGT | + |
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Preference number: 5 (lower is better) Translates to: LLPISLYQQEREVID*NMGCSWLLLPWPNC Trigger: ACAATTAGGCCATGGCAACAGAAGCCAACTACAACCCATGTTCCAATCTATGACCTCCCTCTCCTGCTGGTACAAGGATATGGGCAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000590484.2 ENST00000656913.1 ENST00000657412.1 ENST00000664250.1 ENST00000668386.1 ENST00000671483.1 |
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| CDS CCA 90 bp | GCCACATTCATATCCTTGTACCAGCAGGAGAGGGAGGTCATAGATTaGAACATGGGTTGTAGTTGGCTTCTGTTGCCATGGCCTAATTGT | + |
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Preference number: 5 (lower is better) Translates to: ATFISLYQQEREVID*NMGCSWLLLPWPNC Trigger: ACAATTAGGCCATGGCAACAGAAGCCAACTACAACCCATGTTCCAATCTATGACCTCCCTCTCCTGCTGGTACAAGGATATGAATGTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000587904.5 ENST00000661430.1 ENST00000662324.1 ENST00000671420.1 |
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| CDS CCA 90 bp | CTCCAGATCATATCCTTGTACCAGCAGGAGAGGGAGGTCATAGATTaGAACATGGGTTGTAGTTGGCTTCTGTTGCCATGGCCTAATTGT | + |
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Preference number: 5 (lower is better) Translates to: LQIISLYQQEREVID*NMGCSWLLLPWPNC Trigger: ACAATTAGGCCATGGCAACAGAAGCCAACTACAACCCATGTTCCAATCTATGACCTCCCTCTCCTGCTGGTACAAGGATATGATCTGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000653652.1 ENST00000662735.1 ENST00000663100.1 ENST00000664576.1 ENST00000664842.1 ENST00000666910.1 ENST00000668690.1 ENST00000671593.1 |
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| CDS TCA 90 bp | ATGATGCAGAATGAAAGCCCTTGCCAGATGTTGGTGCCATGCTCTTaGACTTCCCAGACTCCAGATCTTTCTGCTTTCTCCTCTCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: MMQNESPCQMLVPCS*TSQTPDLSAFSSLF Trigger: GAAAAGAGAGGAGAAAGCAGAAAGATCTGGAGTCTGGGAAGTTCAAGAGCATGGCACCAACATCTGGCAAGGGCTTTCATTCTGCATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 22 transcripts: ENST00000587904.5 ENST00000589293.6 ENST00000590484.2 ENST00000591974.5 ENST00000653524.1 ENST00000654820.1 ENST00000655121.1 ENST00000655648.1 ENST00000656570.1 ENST00000656913.1 ENST00000657412.1 ENST00000660365.1 ENST00000662269.1 ENST00000662324.1 ENST00000664250.1 ENST00000665019.1 ENST00000665833.1 ENST00000670316.1 ENST00000670613.1 ENST00000671257.1 ENST00000671420.1 ENST00000671483.1 |
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| CDS TCA 90 bp | ACTTCACAGGAGCATCCAGCCTCCTTTTTATTTTCCTCCATGAGATaGTGCAGAATGAAAGCCCTTGCCAGATGTTGGTGCCATGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: TSQEHPASFLFSSMR*CRMKALARCWCHAL Trigger: AAGAGCATGGCACCAACATCTGGCAAGGGCTTTCATTCTGCATCATCTCATGGAGGAAAATAAAAAGGAGGCTGGATGCTCCTGTGAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 19 transcripts: ENST00000589293.6 ENST00000590484.2 ENST00000591974.5 ENST00000653652.1 ENST00000654820.1 ENST00000655121.1 ENST00000655648.1 ENST00000656570.1 ENST00000656913.1 ENST00000657412.1 ENST00000661430.1 ENST00000662735.1 ENST00000663100.1 ENST00000664250.1 ENST00000664576.1 ENST00000664842.1 ENST00000665833.1 ENST00000666910.1 ENST00000670613.1 |
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| CDS CCA 90 bp | CCATTATCCATATCCTTGTACCAGCAGGAGAGGGAGGTCATAGATTaGAACATGGGTTGTAGTTGGCTTCTGTTGCCATGGCCTAATTGT | + |
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Preference number: 5 (lower is better) Translates to: PLSISLYQQEREVID*NMGCSWLLLPWPNC Trigger: ACAATTAGGCCATGGCAACAGAAGCCAACTACAACCCATGTTCCAATCTATGACCTCCCTCTCCTGCTGGTACAAGGATATGGATAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660365.1 |
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| CDS TCA 90 bp | CCTAATTGTTCTGCTGGTCACTTCTTGCCCCCTTGGCATTACTGCTaGAATCTGCAACTAGTAGATCCATGGTCTTTTCTTTCTTGGCAC | + |
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Preference number: 5 (lower is better) Translates to: PNCSAGHFLPPWHYC*NLQLVDPWSFLSWH Trigger: GTGCCAAGAAAGAAAAGACCATGGATCTACTAGTTGCAGATTTCAGCAGTAATGCCAAGGGGGCAAGAAGTGACCAGCAGAACAATTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 28 transcripts: ENST00000587904.5 ENST00000589293.6 ENST00000590484.2 ENST00000591974.5 ENST00000653524.1 ENST00000653652.1 ENST00000654820.1 ENST00000655648.1 ENST00000656570.1 ENST00000656913.1 ENST00000657412.1 ENST00000660365.1 ENST00000660685.1 ENST00000662269.1 ENST00000662324.1 ENST00000662735.1 ENST00000663100.1 ENST00000664250.1 ENST00000664842.1 ENST00000665019.1 ENST00000665833.1 ENST00000666910.1 ENST00000668386.1 ENST00000668690.1 ENST00000669575.1 ENST00000670613.1 ENST00000671257.1 ENST00000671593.1 |
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| CDS TCA 90 bp | GTGTGGTTTCCTTGGAGTAGTATTAACCAGTTGCTAGAGGCAAGCTaGCTGGGTCTGCTTTGCACCAGAAGTCATAAAATTTGTTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: VWFPWSSINQLLEAS*LGLLCTRSHKICSG Trigger: CCCTGAACAAATTTTATGACTTCTGGTGCAAAGCAGACCCAGTCAGCTTGCCTCTAGCAACTGGTTAATACTACTCCAAGGAAACCACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000587904.5 ENST00000660365.1 ENST00000669575.1 ENST00000671483.1 |
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| CDS CCA 90 bp | AAGGAATACATATCCTTGTACCAGCAGGAGAGGGAGGTCATAGATTaGAACATGGGTTGTAGTTGGCTTCTGTTGCCATGGCCTAATTGT | + |
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Preference number: 5 (lower is better) Translates to: KEYISLYQQEREVID*NMGCSWLLLPWPNC Trigger: ACAATTAGGCCATGGCAACAGAAGCCAACTACAACCCATGTTCCAATCTATGACCTCCCTCTCCTGCTGGTACAAGGATATGTATTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000589293.6 ENST00000653524.1 ENST00000654820.1 ENST00000655648.1 ENST00000656570.1 ENST00000660685.1 ENST00000662269.1 ENST00000665019.1 ENST00000665833.1 ENST00000670613.1 ENST00000671257.1 |
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| CDS TCA 90 bp | AGGGGGTATGAGCTAAGAAAGAAGAAAGACTTCATGTGGGGTTCATaGGCGCTTCTGCTGAAACCTTACTTGTACCTTTACATCCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: RGYELRKKKDFMWGS*ALLLKPYLYLYILQ Trigger: TTGGAGGATGTAAAGGTACAAGTAAGGTTTCAGCAGAAGCGCTCATGAACCCCACATGAAGTCTTTCTTCTTTCTTAGCTCATACCCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670316.1 |
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| CDS TCA 90 bp | ATGATGCAGAATGAAAGCCCTTGCCAGATGTTGGTGCCATGCTCTTaGACTTCCCAGACTCCAGATCTTAATAAACTTGGTTTCTTTACA | + |
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Preference number: 5 (lower is better) Translates to: MMQNESPCQMLVPCS*TSQTPDLNKLGFFT Trigger: TGTAAAGAAACCAAGTTTATTAAGATCTGGAGTCTGGGAAGTTCAAGAGCATGGCACCAACATCTGGCAAGGGCTTTCATTCTGCATCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661430.1 |
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| CDS GCA 90 bp | ACAGATTATGCCTTCTCTGATACTCGTGAGGACTCTGGAAGACATTaGCTTTTTATTTTCCTCCATGAGATGATGCAGAATGAAAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: TDYAFSDTREDSGRH*LFIFLHEMMQNESP Trigger: AGGGCTTTCATTCTGCATCATCTCATGGAGGAAAATAAAAAGGCAATGTCTTCCAGAGTCCTCACGAGTATCAGAGAAGGCATAATCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662269.1 |
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| CDS GCA 90 bp | GTCTGCTTTGCACCAGAAGTCATAAAATTTGTTCAGGGCTCAGCATaGTATCTGCTGAAGGGTAAGAACCTTTTTCTTCCATTATCCATA | + |
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Preference number: 5 (lower is better) Translates to: VCFAPEVIKFVQGSA*YLLKGKNLFLPLSI Trigger: TATGGATAATGGAAGAAAAAGGTTCTTACCCTTCAGCAGATAGCATGCTGAGCCCTGAACAAATTTTATGACTTCTGGTGCAAAGCAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660365.1 |
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| CDS TCA 90 bp | AATTCCATGCTCATCAATTGTAGAAGTCAATCCTCATTAGTCAGTTaGTTATCAGCTCTTGCCCTTGCAAGGAAATTGGTGAGCCATCAT | + |
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Preference number: 5 (lower is better) Translates to: NSMLINCRSQSSLVS*LSALALARKLVSHH Trigger: ATGATGGCTCACCAATTTCCTTGCAAGGGCAAGAGCTGATAATCAACTGACTAATGAGGATTGACTTCTACAATTGATGAGCATGGAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000591974.5 ENST00000669575.1 |
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| CDS TCA 90 bp | CTTCTGCTGAAACCTTACTTGTACCTTTACATCCTCCAATTGAGCTaGAATTTTCTTCTCACTGCAGTGTGCATAGCTACACTCTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: LLLKPYLYLYILQLS*NFLLTAVCIATLFF Trigger: AAAGAAGAGTGTAGCTATGCACACTGCAGTGAGAAGAAAATTTCAGCTCAATTGGAGGATGTAAAGGTACAAGTAAGGTTTCAGCAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670316.1 |
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| CDS GCA 90 bp | CTTGTCAATATGCCATTTGAAGACCCAGTGCACTCTTTTCAATTTTaGATCAGAACTAGGAGCAGTGGTATTTCAATCTTTACATCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LVNMPFEDPVHSFQF*IRTRSSGISIFTSS Trigger: GGAGGATGTAAAGATTGAAATACCACTGCTCCTAGTTCTGATGCAAAATTGAAAAGAGTGCACTGGGTCTTCAAATGGCATATTGACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 25 transcripts: ENST00000587904.5 ENST00000589293.6 ENST00000591974.5 ENST00000653524.1 ENST00000653652.1 ENST00000654780.1 ENST00000654820.1 ENST00000655121.1 ENST00000655648.1 ENST00000656570.1 ENST00000656913.1 ENST00000657412.1 ENST00000660365.1 ENST00000661430.1 ENST00000662269.1 ENST00000662735.1 ENST00000663100.1 ENST00000664250.1 ENST00000664842.1 ENST00000665833.1 ENST00000666910.1 ENST00000670613.1 ENST00000671257.1 ENST00000671420.1 ENST00000671593.1 |
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| CDS CCA 90 bp | GCTGTTTTATTAATAACACATACAGTGCATCCAGCCAGGATTTGTTaGAGACACCTCAGGAAAACGAATGATGTAAATAACAGATGGATG | + |
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Preference number: 5 (lower is better) Translates to: AVLLITHTVHPARIC*RHLRKTNDVNNRWM Trigger: CATCCATCTGTTATTTACATCATTCGTTTTCCTGAGGTGTCTCCAACAAATCCTGGCTGGATGCACTGTATGTGTTATTAATAAAACAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 26 transcripts: ENST00000587904.5 ENST00000589293.6 ENST00000591974.5 ENST00000653524.1 ENST00000653652.1 ENST00000654780.1 ENST00000654820.1 ENST00000655121.1 ENST00000655648.1 ENST00000656570.1 ENST00000656913.1 ENST00000657412.1 ENST00000660365.1 ENST00000661430.1 ENST00000662269.1 ENST00000662735.1 ENST00000663100.1 ENST00000664250.1 ENST00000664576.1 ENST00000664842.1 ENST00000665833.1 ENST00000666910.1 ENST00000670613.1 ENST00000671257.1 ENST00000671420.1 ENST00000671593.1 |
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| CDS GCA 90 bp | CTTGTCAATATGCCATTTGAAGACCCAGTGCACTCTTTTCAATTTTaGATCAGAACTAGGAGCAGTGGTATTTCAATTTGTACCTTTACA | + |
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Preference number: 5 (lower is better) Translates to: LVNMPFEDPVHSFQF*IRTRSSGISICTFT Trigger: TGTAAAGGTACAAATTGAAATACCACTGCTCCTAGTTCTGATGCAAAATTGAAAAGAGTGCACTGGGTCTTCAAATGGCATATTGACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664576.1 |
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| CDS CAA 72 bp | CTGACCGCAGTGCTTAGGGGACAGATCCTAGCCCCATaGACGCATGTGGCACCATTACAGCCCACGGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LTAVLRGQILAP*THVAPLQPTAE Trigger: TTCAGCCGTGGGCTGTAATGGTGCCACATGCGTCAATGGGGCTAGGATCTGTCCCCTAAGCACTGCGGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000665019.1 ENST00000668690.1 |
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| CDS GCA 72 bp | GCTCCTCTGATACGTGGTTCAAGTCCGGAGACAACTTaGATGGCTTGTCCAGGCATGCCTGAGCCCAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: APLIRGSSPETT*MACPGMPEPSL Trigger: AAGGCTGGGCTCAGGCATGCCTGGACAAGCCATGCAAGTTGTCTCCGGACTTGAACCACGTATCAGAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 26 transcripts: ENST00000587904.5 ENST00000589293.6 ENST00000591974.5 ENST00000653524.1 ENST00000653652.1 ENST00000654780.1 ENST00000654820.1 ENST00000655121.1 ENST00000655648.1 ENST00000656570.1 ENST00000656913.1 ENST00000657412.1 ENST00000660365.1 ENST00000661430.1 ENST00000662269.1 ENST00000662735.1 ENST00000663100.1 ENST00000664250.1 ENST00000664576.1 ENST00000664842.1 ENST00000665833.1 ENST00000666910.1 ENST00000670613.1 ENST00000671257.1 ENST00000671420.1 ENST00000671593.1 |
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| CDS CCA 72 bp | AAATGTTTCATAGTGCAAGGGCTGAGCACCACAGCCTaGGGGCCCACAGAAGCAGGTATGCTGATGTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: KCFIVQGLSTTA*GPTEAGMLMWL Trigger: GAGCCACATCAGCATACCTGCTTCTGTGGGCCCCCAGGCTGTGGTGCTCAGCCCTTGCACTATGAAACATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 26 transcripts: ENST00000587904.5 ENST00000589293.6 ENST00000591974.5 ENST00000653524.1 ENST00000653652.1 ENST00000654780.1 ENST00000654820.1 ENST00000655121.1 ENST00000655648.1 ENST00000656570.1 ENST00000656913.1 ENST00000657412.1 ENST00000660365.1 ENST00000661430.1 ENST00000662269.1 ENST00000662735.1 ENST00000663100.1 ENST00000664250.1 ENST00000664576.1 ENST00000664842.1 ENST00000665833.1 ENST00000666910.1 ENST00000670613.1 ENST00000671257.1 ENST00000671420.1 ENST00000671593.1 |
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| CDS TCA 72 bp | TCTGATGCTGTGGTCAAGACCAAAGCAGAATGTGAGTaGGCATCCACGGCCCTAGACCACATCACTCACTGG | + |
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Preference number: 6 (lower is better) Translates to: SDAVVKTKAECE*ASTALDHITHW Trigger: CCAGTGAGTGATGTGGTCTAGGGCCGTGGATGCTCACTCACATTCTGCTTTGGTCTTGACCACAGCATCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665019.1 ENST00000668690.1 |
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| CDS TCA 72 bp | AATGAAAGCCCTTGCCAGATGTTGGTGCCATGCTCTTaGACTTCCCAGACTCCAGATCTCTTTACTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: NESPCQMLVPCS*TSQTPDLFTAA Trigger: GGCAGCAGTAAAGAGATCTGGAGTCTGGGAAGTTCAAGAGCATGGCACCAACATCTGGCAAGGGCTTTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589447.1 ENST00000593282.5 |
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| CDS CCA 72 bp | GCCCCATTGTTCATAGGAAGAGGGTTGAAAGCCCTGTaGGTTTACCGTTCCTTCCAAGTCCTTTGTAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: APLFIGRGLKAL*VYRSFQVLCRA Trigger: TGCTCTACAAAGGACTTGGAAGGAACGGTAAACCCACAGGGCTTTCAACCCTCTTCCTATGAACAATGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593282.5 ENST00000665019.1 ENST00000668690.1 |
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| CDS TCA 72 bp | AATGAAAGCCCTTGCCAGATGTTGGTGCCATGCTCTTaGACTTCCCAGACTCCAGATCTTTCTGCTTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: NESPCQMLVPCS*TSQTPDLSAFS Trigger: GGAGAAAGCAGAAAGATCTGGAGTCTGGGAAGTTCAAGAGCATGGCACCAACATCTGGCAAGGGCTTTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000587904.5 ENST00000589293.6 ENST00000590484.2 ENST00000591974.5 ENST00000653524.1 ENST00000654820.1 ENST00000655121.1 ENST00000655648.1 ENST00000656570.1 ENST00000656913.1 ENST00000657412.1 ENST00000660365.1 ENST00000662269.1 ENST00000662324.1 ENST00000664250.1 ENST00000665019.1 ENST00000665833.1 ENST00000670316.1 ENST00000670613.1 ENST00000671257.1 ENST00000671420.1 ENST00000671483.1 |
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| CDS TCA 72 bp | GTTGGTCTGTTCCATTTGCCTTTCTCCAATCCCAGGTaGTGGCCACAGTGGCAGAACCTTGTGGTATATTTG | + |
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Preference number: 6 (lower is better) Translates to: VGLFHLPFSNPR*WPQWQNLVVYL Trigger: CAAATATACCACAAGGTTCTGCCACTGTGGCCATCACCTGGGATTGGAGAAAGGCAAATGGAACAGACCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000589293.6 ENST00000590484.2 ENST00000655121.1 ENST00000656570.1 ENST00000657412.1 ENST00000664250.1 ENST00000666910.1 ENST00000670613.1 |
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| CDS GCA 72 bp | AATGAGGACTGTAATTCTGAGTTGGTCTGTTCCATTTaGCTTTCTCCAATCCCAGGTGATGGCCACAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: NEDCNSELVCSI*LSPIPGDGHSG Trigger: GCCACTGTGGCCATCACCTGGGATTGGAGAAAGGCAAATGGAACAGACCAACTCAGAATTACAGTCCTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000589293.6 ENST00000590484.2 ENST00000655121.1 ENST00000656570.1 ENST00000657412.1 ENST00000664250.1 ENST00000666910.1 ENST00000670613.1 |
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| CDS CCA 72 bp | GAGAGGGAGGTCATAGATTGGAACATGGGTTGTAGTTaGCTTCTGTTGCCATGGCCTAATTGTTCTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: EREVIDWNMGCS*LLLPWPNCSAG Trigger: ACCAGCAGAACAATTAGGCCATGGCAACAGAAGCCAACTACAACCCATGTTCCAATCTATGACCTCCCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 32 transcripts: ENST00000587904.5 ENST00000589293.6 ENST00000590484.2 ENST00000591974.5 ENST00000653524.1 ENST00000653652.1 ENST00000654820.1 ENST00000655648.1 ENST00000656570.1 ENST00000656913.1 ENST00000657412.1 ENST00000660365.1 ENST00000660685.1 ENST00000661430.1 ENST00000662269.1 ENST00000662324.1 ENST00000662735.1 ENST00000663100.1 ENST00000664250.1 ENST00000664576.1 ENST00000664842.1 ENST00000665019.1 ENST00000665833.1 ENST00000666910.1 ENST00000668386.1 ENST00000668690.1 ENST00000669575.1 ENST00000670613.1 ENST00000671257.1 ENST00000671420.1 ENST00000671483.1 ENST00000671593.1 |
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| CDS TCA 72 bp | AATGAAAGCCCTTGCCAGATGTTGGTGCCATGCTCTTaGACTTCCCAGACTCCAGATCATATCCTTGTACCA | + |
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Preference number: 6 (lower is better) Translates to: NESPCQMLVPCS*TSQTPDHILVP Trigger: TGGTACAAGGATATGATCTGGAGTCTGGGAAGTTCAAGAGCATGGCACCAACATCTGGCAAGGGCTTTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000653652.1 ENST00000662735.1 ENST00000663100.1 ENST00000664576.1 ENST00000664842.1 ENST00000666910.1 ENST00000668690.1 ENST00000671593.1 |
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| CDS CCA 72 bp | ATTCTGCCCATTGACACCTTTGAGCGTTCTGTCTTCTaGGGCTACAGTGTGATGACATCAAAATCCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: ILPIDTFERSVF*GYSVMTSKSLF Trigger: GAAGAGGGATTTTGATGTCATCACACTGTAGCCCCAGAAGACAGAACGCTCAAAGGTGTCAATGGGCAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000587904.5 ENST00000590484.2 ENST00000591974.5 ENST00000656913.1 ENST00000657412.1 ENST00000664250.1 ENST00000668386.1 ENST00000669575.1 ENST00000671483.1 |
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| CDS CCA 72 bp | AGGTGGAGGTTGATGGATCACCTTTCCTTCTTTGTCTaGCATCTCCAGGAGCTTCTTCCTGTATCTTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: RWRLMDHLSFFV*HLQELLPVSCK Trigger: TTTGCAAGATACAGGAAGAAGCTCCTGGAGATGCCAGACAAAGAAGGAAAGGTGATCCATCAACCTCCACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593282.5 ENST00000665019.1 ENST00000668690.1 |
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| CDS TCA 72 bp | TCTGCTGGTCACTTCTTGCCCCCTTGGCATTACTGCTaGAATCTGCAACTAGTAGATCCATGGTCTTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SAGHFLPPWHYC*NLQLVDPWSFL Trigger: AAGAAAAGACCATGGATCTACTAGTTGCAGATTTCAGCAGTAATGCCAAGGGGGCAAGAAGTGACCAGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 31 transcripts: ENST00000587904.5 ENST00000589293.6 ENST00000590484.2 ENST00000591974.5 ENST00000653524.1 ENST00000653652.1 ENST00000654820.1 ENST00000655648.1 ENST00000656570.1 ENST00000656913.1 ENST00000657412.1 ENST00000660365.1 ENST00000660685.1 ENST00000661430.1 ENST00000662269.1 ENST00000662324.1 ENST00000662735.1 ENST00000663100.1 ENST00000664250.1 ENST00000664576.1 ENST00000664842.1 ENST00000665019.1 ENST00000665833.1 ENST00000666910.1 ENST00000668386.1 ENST00000668690.1 ENST00000669575.1 ENST00000670613.1 ENST00000671257.1 ENST00000671483.1 ENST00000671593.1 |
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| CDS TCA 72 bp | CCTTGGAGTAGTATTAACCAGTTGCTAGAGGCAAGCTaGCTGGGTCTGCTTTGCACCAGAAGTCATAAAATT | + |
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Preference number: 6 (lower is better) Translates to: PWSSINQLLEAS*LGLLCTRSHKI Trigger: AATTTTATGACTTCTGGTGCAAAGCAGACCCAGTCAGCTTGCCTCTAGCAACTGGTTAATACTACTCCAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000587904.5 ENST00000660365.1 ENST00000669575.1 ENST00000671483.1 |
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| CDS TCA 72 bp | AATGAAAGCCCTTGCCAGATGTTGGTGCCATGCTCTTaGACTTCCCAGACTCCAGATCTTAATAAACTTGGT | + |
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Preference number: 6 (lower is better) Translates to: NESPCQMLVPCS*TSQTPDLNKLG Trigger: ACCAAGTTTATTAAGATCTGGAGTCTGGGAAGTTCAAGAGCATGGCACCAACATCTGGCAAGGGCTTTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661430.1 |
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| CDS GCA 72 bp | GTAATCCATTGGATGCTGTATGTCATCTACAAATTCTaGCCATTGACACCTTTGAGCGTTCTGTCTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: VIHWMLYVIYKF*PLTPLSVLSSG Trigger: CCCAGAAGACAGAACGCTCAAAGGTGTCAATGGGCAGAATTTGTAGATGACATACAGCATCCAATGGATTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000587904.5 ENST00000590484.2 ENST00000591974.5 ENST00000656913.1 ENST00000657412.1 ENST00000664250.1 ENST00000668386.1 ENST00000669575.1 ENST00000671483.1 |
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| CDS TCA 72 bp | GAGCTAAGAAAGAAGAAAGACTTCATGTGGGGTTCATaGGCGCTTCTGCTGAAACCTTACTTGTACCTTTAC | + |
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Preference number: 6 (lower is better) Translates to: ELRKKKDFMWGS*ALLLKPYLYLY Trigger: GTAAAGGTACAAGTAAGGTTTCAGCAGAAGCGCTCATGAACCCCACATGAAGTCTTTCTTCTTTCTTAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670316.1 |
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| CDS GCA 72 bp | GAGAGAGGATTTATGATATTTGAGGTGGTGGTTGCATaGGTTCACATGGCGAAAGACATGGACGTAAACATA | + |
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Preference number: 6 (lower is better) Translates to: ERGFMIFEVVVA*VHMAKDMDVNI Trigger: TATGTTTACGTCCATGTCTTTCGCCATGTGAACGCATGCAACCACCACCTCAAATATCATAAATCCTCTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 26 transcripts: ENST00000587904.5 ENST00000589293.6 ENST00000591974.5 ENST00000653524.1 ENST00000653652.1 ENST00000654780.1 ENST00000654820.1 ENST00000655121.1 ENST00000655648.1 ENST00000656570.1 ENST00000656913.1 ENST00000657412.1 ENST00000660365.1 ENST00000661430.1 ENST00000662269.1 ENST00000662735.1 ENST00000663100.1 ENST00000664250.1 ENST00000664576.1 ENST00000664842.1 ENST00000665833.1 ENST00000666910.1 ENST00000670613.1 ENST00000671257.1 ENST00000671420.1 ENST00000671593.1 |
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| CDS GCA 72 bp | GCACCAGAAGTCATAAAATTTGTTCAGGGCTCAGCATaGTATCTGCTGAAGGGTAAGAACCTTTTTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: APEVIKFVQGSA*YLLKGKNLFLP Trigger: TGGAAGAAAAAGGTTCTTACCCTTCAGCAGATAGCATGCTGAGCCCTGAACAAATTTTATGACTTCTGGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000587904.5 ENST00000660365.1 ENST00000669575.1 ENST00000671483.1 |
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| CDS TCA 72 bp | GGCTACAGTGTGATGACATCAAAATCCCTCTTCTGTTaGTTTAGGCACATCCAATTCCATGCTCATCAATTG | + |
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Preference number: 6 (lower is better) Translates to: GYSVMTSKSLFC*FRHIQFHAHQL Trigger: CAATTGATGAGCATGGAATTGGATGTGCCTAAATCAACAGAAGAGGGATTTTGATGTCATCACACTGTAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000587904.5 ENST00000590484.2 ENST00000591974.5 ENST00000656913.1 ENST00000657412.1 ENST00000664250.1 ENST00000668386.1 ENST00000669575.1 ENST00000671483.1 |
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| CDS GCA 72 bp | AAGTCAATCCTCATTAGTCAGTTGATTATCAGCTCTTaGCCTTGCAAGGAAATTGGTGAGCCATCATCATCT | + |
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Preference number: 6 (lower is better) Translates to: KSILISQLIISS*PCKEIGEPSSS Trigger: AGATGATGATGGCTCACCAATTTCCTTGCAAGGGCAAGAGCTGATAATCAACTGACTAATGAGGATTGACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000591974.5 ENST00000669575.1 |
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| CDS TCA 72 bp | CTCATCAATTGTAGAAGTCAATCCTCATTAGTCAGTTaGTTATCAGCTCTTGCCCTTGCAAGGAAATTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LINCRSQSSLVS*LSALALARKLV Trigger: CACCAATTTCCTTGCAAGGGCAAGAGCTGATAATCAACTGACTAATGAGGATTGACTTCTACAATTGATGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000591974.5 ENST00000669575.1 |
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| CDS TCA 72 bp | CTCATCAATTGTAGAAGTCAATCCTCATTAGTCAGTTaGTTATCAGCTCTTGCCCATATCCTTGTACCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LINCRSQSSLVS*LSALAHILVPA Trigger: TGCTGGTACAAGGATATGGGCAAGAGCTGATAATCAACTGACTAATGAGGATTGACTTCTACAATTGATGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000590484.2 ENST00000656913.1 ENST00000657412.1 ENST00000664250.1 ENST00000668386.1 ENST00000671483.1 |
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| CDS GCA 72 bp | TCTTTCTCCTTGTCAATATGCCATTTGAAGACCCAGTaGACTCTTTTCAATTTTGCATCAGAACTAGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: SFSLSICHLKTQ*TLFNFASELGA Trigger: TGCTCCTAGTTCTGATGCAAAATTGAAAAGAGTGCACTGGGTCTTCAAATGGCATATTGACAAGGAGAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 26 transcripts: ENST00000587904.5 ENST00000589293.6 ENST00000591974.5 ENST00000653524.1 ENST00000653652.1 ENST00000654780.1 ENST00000654820.1 ENST00000655121.1 ENST00000655648.1 ENST00000656570.1 ENST00000656913.1 ENST00000657412.1 ENST00000660365.1 ENST00000661430.1 ENST00000662269.1 ENST00000662735.1 ENST00000663100.1 ENST00000664250.1 ENST00000664576.1 ENST00000664842.1 ENST00000665833.1 ENST00000666910.1 ENST00000670613.1 ENST00000671257.1 ENST00000671420.1 ENST00000671593.1 |
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| CDS CCA 72 bp | ACAACAATCTGGCAAGGGAATATCACAAGGTATAAATaGATTCGAAGGGCTTCAGCTTCAAAATGCAACTTG | + |
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Preference number: 6 (lower is better) Translates to: TTIWQGNITRYK*IRRASASKCNL Trigger: CAAGTTGCATTTTGAAGCTGAAGCCCTTCGAATCCATTTATACCTTGTGATATTCCCTTGCCAGATTGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000587904.5 ENST00000660365.1 ENST00000669575.1 ENST00000671483.1 |
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| CDS CAA 72 bp | TATCCATGTATGACAAATTGTGGAAACAATCCTGGTTaGAAGGTCACAAAAGTTCAGGGCTTAGCTCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: YPCMTNCGNNPG*KVTKVQGLALS Trigger: TGACAGAGCTAAGCCCTGAACTTTTGTGACCTTCAAACCAGGATTGTTTCCACAATTTGTCATACATGGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000589447.1 ENST00000662324.1 ENST00000671483.1 |
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| CDS CAA 90 bp | CAAGTCCTTTGTAGAGCATTCTGTATAGAGATCATTGATCTGCTCTaGCTATCTTGGATTACTCAGGTCTTGAATGCTGACATTTGTAAG | + |
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Preference number: 6 (lower is better) Translates to: QVLCRAFCIEIIDLL*LSWITQVLNADICK Trigger: CTTACAAATGTCAGCATTCAAGACCTGAGTAATCCAAGATAGCAAGAGCAGATCAATGATCTCTATACAGAATGCTCTACAAAGGACTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593282.5 ENST00000665019.1 ENST00000668690.1 |
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| CDS GCA 72 bp | ATGCCATTTGAAGACCCAGTGCACTCTTTTCAATTTTaGATCAGAACTAGGAGCAGTGGTATTTCAATCTTT | + |
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Preference number: 6 (lower is better) Translates to: MPFEDPVHSFQF*IRTRSSGISIF Trigger: AAAGATTGAAATACCACTGCTCCTAGTTCTGATGCAAAATTGAAAAGAGTGCACTGGGTCTTCAAATGGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 25 transcripts: ENST00000587904.5 ENST00000589293.6 ENST00000591974.5 ENST00000653524.1 ENST00000653652.1 ENST00000654780.1 ENST00000654820.1 ENST00000655121.1 ENST00000655648.1 ENST00000656570.1 ENST00000656913.1 ENST00000657412.1 ENST00000660365.1 ENST00000661430.1 ENST00000662269.1 ENST00000662735.1 ENST00000663100.1 ENST00000664250.1 ENST00000664842.1 ENST00000665833.1 ENST00000666910.1 ENST00000670613.1 ENST00000671257.1 ENST00000671420.1 ENST00000671593.1 |
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| CDS GCA 72 bp | ATGCCATTTGAAGACCCAGTGCACTCTTTTCAATTTTaGATCAGAACTAGGAGCAGTGGTATTTCAATTTGT | + |
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Preference number: 6 (lower is better) Translates to: MPFEDPVHSFQF*IRTRSSGISIC Trigger: ACAAATTGAAATACCACTGCTCCTAGTTCTGATGCAAAATTGAAAAGAGTGCACTGGGTCTTCAAATGGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664576.1 |
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| CDS CCA 72 bp | CTTGGGAAATCTCCTGACCTAATAACAAGTGTGTTATaGTTTAATTATGCCACCCAAAAAGCATGTGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: LGKSPDLITSVL*FNYATQKACVE Trigger: TTCAACACATGCTTTTTGGGTGGCATAATTAAACCATAACACACTTGTTATTAGGTCAGGAGATTTCCCAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000589447.1 ENST00000662324.1 ENST00000671483.1 |
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| CDS CCA 72 bp | TTCTGTATAGAGATCATTGATCTGCTCTTGCTATCTTaGATTACTCAGGTCTTGAATGCTGACATTTGTAAG | + |
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Preference number: 6 (lower is better) Translates to: FCIEIIDLLLLS*ITQVLNADICK Trigger: CTTACAAATGTCAGCATTCAAGACCTGAGTAATCCAAGATAGCAAGAGCAGATCAATGATCTCTATACAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593282.5 ENST00000665019.1 ENST00000668690.1 |
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| CDS CAA 72 bp | GTATTCAGAATGGTTGAGATTTCCAGAAGTTGGATCTaGAGACAAGCAGTGATTTTCAGTATTACCATTCTG | + |
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Preference number: 6 (lower is better) Translates to: VFRMVEISRSWI*RQAVIFSITIL Trigger: CAGAATGGTAATACTGAAAATCACTGCTTGTCTCAAGATCCAACTTCTGGAAATCTCAACCATTCTGAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000587904.5 ENST00000661430.1 ENST00000662324.1 ENST00000671420.1 |
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| CDS CAA 72 bp | CATGTTTTTATCCATTTCTCTTTCTCTTCCTCTTCCTaGCTTTCCCTCTCCTTCTCTTTCTCAAGAAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: HVFIHFSFSSSS*LSLSFSFSRRK Trigger: TTTTCTTCTTGAGAAAGAGAAGGAGAGGGAAAGCAAGGAAGAGGAAGAGAAAGAGAAATGGATAAAAACATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENST00000591974.5 ENST00000653652.1 ENST00000654820.1 ENST00000656570.1 ENST00000661430.1 ENST00000664576.1 ENST00000664842.1 ENST00000665833.1 ENST00000666910.1 ENST00000670613.1 ENST00000671257.1 |
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| CDS GCA 72 bp | ATGTTTTTATCCATTTCTCTTTCTCTTCCTCTTCCTTaGTTTCCCTCTCCTTCTCTTTCTCAAGAAGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: MFLSISLSLPLP*FPSPSLSQEEK Trigger: TTTTTCTTCTTGAGAAAGAGAAGGAGAGGGAAAGCAAGGAAGAGGAAGAGAAAGAGAAATGGATAAAAACAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENST00000591974.5 ENST00000653652.1 ENST00000654820.1 ENST00000656570.1 ENST00000661430.1 ENST00000664576.1 ENST00000664842.1 ENST00000665833.1 ENST00000666910.1 ENST00000670613.1 ENST00000671257.1 |
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