Pregenerated sensors for LINC01533 (Homo sapiens)
Ensembl gene IDs: ENSG00000267779Ensembl transcript IDs: ENST00000585739.1, ENST00000588694.6, ENST00000589110.1, ENST00000590719.2, ENST00000593056.2, ENST00000652115.1, ENST00000656139.1, ENST00000656347.1, ENST00000657008.1, ENST00000660670.1, ENST00000661915.1, ENST00000662070.1, ENST00000662548.1, ENST00000663104.1, ENST00000663477.1, ENST00000666300.1
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGGCCAGGTGTGTTGAAGGCCTCTCCAGGGCCCCAGAGACAGGGATaGTGGCTGGCATTTATCTCTTTAGGCTTCCCCTGCAAATGGCGG | + |
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Preference number: 5 (lower is better) Translates to: RPGVLKASPGPQRQG*WLAFISLGFPCKWR Trigger: CCGCCATTTGCAGGGGAAGCCTAAAGAGATAAATGCCAGCCAGCATCCCTGTCTCTGGGGCCCTGGAGAGGCCTTCAACACACCTGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 14 transcripts: ENST00000588694.6 ENST00000590719.2 ENST00000593056.2 ENST00000652115.1 ENST00000656139.1 ENST00000656347.1 ENST00000657008.1 ENST00000660670.1 ENST00000661915.1 ENST00000662070.1 ENST00000662548.1 ENST00000663104.1 ENST00000663477.1 ENST00000666300.1 |
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| CDS GCA 90 bp | CTGGAGAGTCTCAAGGGAGTGGCTTTTCCGCTGAGAAATGAAGACTaGCACATAGCCGCCAGCCGGGCTTGCTGTAGGAAGCTTACAATT | + |
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Preference number: 5 (lower is better) Translates to: LESLKGVAFPLRNED*HIAASRACCRKLTI Trigger: AATTGTAAGCTTCCTACAGCAAGCCCGGCTGGCGGCTATGTGGCAGTCTTCATTTCTCAGCGGAAAAGCCACTCCCTTGAGACTCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000590719.2 ENST00000652115.1 ENST00000662548.1 ENST00000663104.1 ENST00000663477.1 ENST00000666300.1 |
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| CDS GCA 90 bp | AACTGTAACTCTTTCCTCGCAATTCAAACGGTGCAGGGGGACAGCTaGTCCTGGAGATGGATTCAGCCACGGCCTTTTCTTCTCTCGTGC | + |
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Preference number: 5 (lower is better) Translates to: NCNSFLAIQTVQGDS*SWRWIQPRPFLLSC Trigger: GCACGAGAGAAGAAAAGGCCGTGGCTGAATCCATCTCCAGGAGCAGCTGTCCCCCTGCACCGTTTGAATTGCGAGGAAAGAGTTACAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000657008.1 ENST00000661915.1 ENST00000662070.1 ENST00000666300.1 |
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| CDS CCA 90 bp | AGAAGGGGGCTGAAGTTCCCAGAAGCTGAACTTCCAGTTGACAGCTaGCAGGTTGTTGCTGAGATGGTGGTTGCTGGAAAGGTGCATCTG | + |
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Preference number: 5 (lower is better) Translates to: RRGLKFPEAELPVDS*QVVAEMVVAGKVHL Trigger: CAGATGCACCTTTCCAGCAACCACCATCTCAGCAACAACCTGCCAGCTGTCAACTGGAAGTTCAGCTTCTGGGAACTTCAGCCCCCTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 13 transcripts: ENST00000585739.1 ENST00000590719.2 ENST00000593056.2 ENST00000652115.1 ENST00000656139.1 ENST00000656347.1 ENST00000657008.1 ENST00000660670.1 ENST00000661915.1 ENST00000662548.1 ENST00000663104.1 ENST00000663477.1 ENST00000666300.1 |
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| CDS GCA 90 bp | TACAAGGCCTCATGCGACCTTGTTTTTGCCACTTTCTCTGCCCTCTaGTCCTACCATTCTCACTGTTCCTCACTCTACTCCAGCCACAGG | + |
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Preference number: 5 (lower is better) Translates to: YKASCDLVFATFSAL*SYHSHCSSLYSSHR Trigger: CCTGTGGCTGGAGTAGAGTGAGGAACAGTGAGAATGGTAGGAGCAGAGGGCAGAGAAAGTGGCAAAAACAAGGTCGCATGAGGCCTTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656347.1 |
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| CDS GCA 90 bp | TTTCCGCTGAGAAATGAAGACTGCCACATAGCCGCCAGCCGGGCTTaGTGTAGGAAGCTTACAATTCAGCTCTCTTCGGTGGAGTTTGAA | + |
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Preference number: 5 (lower is better) Translates to: FPLRNEDCHIAASRA*CRKLTIQLSSVEFE Trigger: TTCAAACTCCACCGAAGAGAGCTGAATTGTAAGCTTCCTACAGCAAGCCCGGCTGGCGGCTATGTGGCAGTCTTCATTTCTCAGCGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000590719.2 ENST00000652115.1 ENST00000662548.1 ENST00000663104.1 ENST00000663477.1 ENST00000666300.1 |
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| CDS CCA 90 bp | CCAAAGCTTCCAGTGGAGGCCAAGAGTCTGGCTTGTGGATGGGCATaGCTTTTGCCCAGCATAACAACTCAGAATGTGTGGATTTATCGG | + |
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Preference number: 5 (lower is better) Translates to: PKLPVEAKSLACGWA*LLPSITTQNVWIYR Trigger: CCGATAAATCCACACATTCTGAGTTGTTATGCTGGGCAAAAGCCATGCCCATCCACAAGCCAGACTCTTGGCCTCCACTGGAAGCTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589110.1 |
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| CDS CCA 90 bp | CAACACATGAACGTGAATCTTGGGCTTTTGCACCTTGCCCAGAGGTaGGTGACTGCCTCTTCCTTGTCCTTGGCATCTCTGTCCAAATGT | + |
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Preference number: 5 (lower is better) Translates to: QHMNVNLGLLHLAQR*VTASSLSLASLSKC Trigger: ACATTTGGACAGAGATGCCAAGGACAAGGAAGAGGCAGTCACCCACCTCTGGGCAAGGTGCAAAAGCCCAAGATTCACGTTCATGTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656347.1 |
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| CDS CCA 90 bp | CCACAGGATCTTCTTTTTGTGCTTGCAACACATGAACGTGAATCTTaGGCTTTTGCACCTTGCCCAGAGGTGGGTGACTGCCTCTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: PQDLLFVLATHERES*AFAPCPEVGDCLFL Trigger: AAGGAAGAGGCAGTCACCCACCTCTGGGCAAGGTGCAAAAGCCCAAGATTCACGTTCATGTGTTGCAAGCACAAAAAGAAGATCCTGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656347.1 |
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| CDS TCA 90 bp | GTGGATTTATCGGACTCCTTAATCTGTCAGGCTGTAAGTCCTGGATaGGGTCTGTGGCTCCTGACTCAAGAGATGGCACAAACCATGAGA | + |
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Preference number: 5 (lower is better) Translates to: VDLSDSLICQAVSPG*GLWLLTQEMAQTMR Trigger: TCTCATGGTTTGTGCCATCTCTTGAGTCAGGAGCCACAGACCTCATCCAGGACTTACAGCCTGACAGATTAAGGAGTCCGATAAATCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589110.1 |
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| CDS CCA 90 bp | AAAGTTCCAAAGCTTCCAGTGGAGGCCAAGAGTCTGGCTTGTGGATaGGCATGGCTTTTGCCCAGCATAACAACTCAGAATGTGTGGATT | + |
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Preference number: 5 (lower is better) Translates to: KVPKLPVEAKSLACG*AWLLPSITTQNVWI Trigger: AATCCACACATTCTGAGTTGTTATGCTGGGCAAAAGCCATGCCCATCCACAAGCCAGACTCTTGGCCTCCACTGGAAGCTTTGGAACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589110.1 |
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| CDS TCA 90 bp | GCTGGCAGGTTGTTGCTGAGATGGTGGTTGCTGGAAAGGTGCATCTaGCCCAAGCTGGGTTTGGTTTTACTGGAAATCTGTATTCAAAAG | + |
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Preference number: 5 (lower is better) Translates to: AGRLLLRWWLLERCI*PKLGLVLLEICIQK Trigger: CTTTTGAATACAGATTTCCAGTAAAACCAAACCCAGCTTGGGTCAGATGCACCTTTCCAGCAACCACCATCTCAGCAACAACCTGCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000585739.1 ENST00000590719.2 ENST00000593056.2 ENST00000652115.1 ENST00000656139.1 ENST00000656347.1 ENST00000657008.1 ENST00000660670.1 ENST00000661915.1 ENST00000662548.1 ENST00000663104.1 ENST00000663477.1 ENST00000666300.1 |
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| CDS CCA 90 bp | ATGTGTGGATTTATCGGACTCCTTAATCTGTCAGGCTGTAAGTCCTaGATGAGGTCTGTGGCTCCTGACTCAAGAGATGGCACAAACCAT | + |
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Preference number: 5 (lower is better) Translates to: MCGFIGLLNLSGCKS*MRSVAPDSRDGTNH Trigger: ATGGTTTGTGCCATCTCTTGAGTCAGGAGCCACAGACCTCATCCAGGACTTACAGCCTGACAGATTAAGGAGTCCGATAAATCCACACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589110.1 |
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| CDS CCA 90 bp | CCAGCCGGGCTTGCTGTAGGAAGCTTACAATTCAGCTCTCTTCGGTaGAGTTTGAAGTTAAATGGTCCTGTCTGCTTCTTCTCTTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: PAGLAVGSLQFSSLR*SLKLNGPVCFFSCL Trigger: CAAACAAGAGAAGAAGCAGACAGGACCATTTAACTTCAAACTCCACCGAAGAGAGCTGAATTGTAAGCTTCCTACAGCAAGCCCGGCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000590719.2 ENST00000652115.1 ENST00000662548.1 ENST00000663104.1 ENST00000663477.1 ENST00000666300.1 |
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| CDS CCA 90 bp | AATGGCGGTAATGATGGTGCTTCCATAATACGGCGTGTTACCATATaGCAAAGCAGAAGCAAGTTGGAGCCTGGAAGAAATGACCCATGT | + |
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Preference number: 5 (lower is better) Translates to: NGGNDGASIIRRVTI*QSRSKLEPGRNDPC Trigger: ACATGGGTCATTTCTTCCAGGCTCCAACTTGCTTCTGCTTTGCCATATGGTAACACGCCGTATTATGGAAGCACCATCATTACCGCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000588694.6 ENST00000593056.2 ENST00000652115.1 ENST00000656139.1 ENST00000656347.1 ENST00000661915.1 ENST00000662070.1 ENST00000662548.1 ENST00000663104.1 ENST00000663477.1 ENST00000666300.1 |
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| CDS TCA 90 bp | TGCATCGGGGAGTTTGAGAGCAAAGGGATTCCCACTGAGCCTCAGTaGTCACATTTCAATATCTGGAAATCCATTTGGAGGAATGTGACA | + |
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Preference number: 5 (lower is better) Translates to: CIGEFESKGIPTEPQ*SHFNIWKSIWRNVT Trigger: TGTCACATTCCTCCAAATGGATTTCCAGATATTGAAATGTGATCACTGAGGCTCAGTGGGAATCCCTTTGCTCTCAAACTCCCCGATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656347.1 |
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| CDS GCA 90 bp | TTAAATGCCAGGGAAGAGATTTGGAAGCGTTTTGGCAGATTCGGATaGACGGACCGACCTGCGCCAGGTTCTTCTAACGTTAATAAATAT | + |
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Preference number: 5 (lower is better) Translates to: LNAREEIWKRFGRFG*TDRPAPGSSNVNKY Trigger: ATATTTATTAACGTTAGAAGAACCTGGCGCAGGTCGGTCCGTGCATCCGAATCTGCCAAAACGCTTCCAAATCTCTTCCCTGGCATTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662070.1 |
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| CDS CCA 90 bp | CTCTTCTTCCAGCACAAGCTCACATTGCTTATAACATCTGCCTGGTaGCTCAGTCTTCTTATTGGAAGTGTCTGTAATCCCAGAGACTTG | + |
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Preference number: 5 (lower is better) Translates to: LFFQHKLTLLITSAW*LSLLIGSVCNPRDL Trigger: CAAGTCTCTGGGATTACAGACACTTCCAATAAGAAGACTGAGCCACCAGGCAGATGTTATAAGCAATGTGAGCTTGTGCTGGAAGAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656347.1 |
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| CDS CCA 90 bp | TCTCTCTTCTTCCAGCACAAGCTCACATTGCTTATAACATCTGCCTaGTGGCTCAGTCTTCTTATTGGAAGTGTCTGTAATCCCAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: SLFFQHKLTLLITSA*WLSLLIGSVCNPRD Trigger: GTCTCTGGGATTACAGACACTTCCAATAAGAAGACTGAGCCACCAGGCAGATGTTATAAGCAATGTGAGCTTGTGCTGGAAGAAGAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656347.1 |
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| CDS TCA 90 bp | TGTTACCATATGGCAAAGCAGAAGCAAGTTGGAGCCTGGAAGAAATaGCCCATGTGGTGTCTTAGGCCAGGGCAATGCTTAATAAATGAT | + |
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Preference number: 5 (lower is better) Translates to: CYHMAKQKQVGAWKK*PMWCLRPGQCLIND Trigger: ATCATTTATTAAGCATTGCCCTGGCCTAAGACACCACATGGGTCATTTCTTCCAGGCTCCAACTTGCTTCTGCTTTGCCATATGGTAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000588694.6 ENST00000593056.2 ENST00000652115.1 ENST00000656139.1 ENST00000662070.1 ENST00000663104.1 ENST00000666300.1 |
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| CDS GCA 90 bp | ATATGGACCTCTGCATTCTTAAACAGGATTTTCAAATACACGAGATaGAAGCACTCACGGATTTGCACGCAAACAGATACCTGCCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: IWTSAFLNRIFKYTR*KHSRICTQTDTCLL Trigger: GAGAAGGCAGGTATCTGTTTGCGTGCAAATCCGTGAGTGCTTGCATCTCGTGTATTTGAAAATCCTGTTTAAGAATGCAGAGGTCCATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000590719.2 ENST00000593056.2 ENST00000662548.1 ENST00000663104.1 ENST00000666300.1 |
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| CDS GCA 90 bp | AAACCGTTGACCAAGCACAATGTACGTAGACAAATGTCTTCTCATTaGGTGATGCGTGAAGGCCATGATAGATGGCTTCTAACAACAAAG | + |
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Preference number: 5 (lower is better) Translates to: KPLTKHNVRRQMSSH*VMREGHDRWLLTTK Trigger: CTTTGTTGTTAGAAGCCATCTATCATGGCCTTCACGCATCACGCAATGAGAAGACATTTGTCTACGTACATTGTGCTTGGTCAACGGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000588694.6 ENST00000663104.1 |
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| CDS GCA 90 bp | ATATGGACCTCTGCATTCTTAAACAGGATTTTCAAATACACGAGATaGAAGCACTCACGGATTTGCACGCAAACAGATACCTTCTCCATG | + |
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Preference number: 5 (lower is better) Translates to: IWTSAFLNRIFKYTR*KHSRICTQTDTFSM Trigger: CATGGAGAAGGTATCTGTTTGCGTGCAAATCCGTGAGTGCTTGCATCTCGTGTATTTGAAAATCCTGTTTAAGAATGCAGAGGTCCATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585739.1 |
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| CDS GCA 90 bp | CAATTCAGCTCTCTTCGGTGGAGTTTGAAGTTAAATGGTCCTGTCTaGTTCTTCTCTTGTTTGTGTCACTTGTTAAAGATCCCAGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: QFSSLRWSLKLNGPV*FFSCLCHLLKIPVS Trigger: AGACACTGGGATCTTTAACAAGTGACACAAACAAGAGAAGAAGCAGACAGGACCATTTAACTTCAAACTCCACCGAAGAGAGCTGAATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000590719.2 ENST00000652115.1 ENST00000662548.1 ENST00000663477.1 ENST00000666300.1 |
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| CDS GCA 90 bp | ATATGGACCTCTGCATTCTTAAACAGGATTTTCAAATACACGAGATaGAAGCACTCACGGATTTGCACGCAAACAGATACCTACCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: IWTSAFLNRIFKYTR*KHSRICTQTDTYQR Trigger: TCTCTGGTAGGTATCTGTTTGCGTGCAAATCCGTGAGTGCTTGCATCTCGTGTATTTGAAAATCCTGTTTAAGAATGCAGAGGTCCATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000652115.1 ENST00000656139.1 ENST00000657008.1 ENST00000660670.1 ENST00000661915.1 ENST00000663477.1 |
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| CDS TCA 90 bp | TCCTCATCACAGTCTGTACTCATGAAATATTTGTCTCTGAAGCCCTaGATTTTTACTGCAGGGCTGTTGATGGGAAACTTGGAAAGAATA | + |
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Preference number: 5 (lower is better) Translates to: SSSQSVLMKYLSLKP*IFTAGLLMGNLERI Trigger: TATTCTTTCCAAGTTTCCCATCAACAGCCCTGCAGTAAAAATTCAGGGCTTCAGAGACAAATATTTCATGAGTACAGACTGTGATGAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000593056.2 ENST00000652115.1 ENST00000657008.1 ENST00000660670.1 ENST00000661915.1 ENST00000662070.1 ENST00000662548.1 ENST00000663104.1 ENST00000666300.1 |
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| CDS GCA 90 bp | CATCTTGTTTTTCTTTCTCTGGATCCTGATAGAGAGGGAATGGCTTaGTTTTCCTCATCACAGTCTGTACTCATGAAATATTTGTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: HLVFLSLDPDREGMA*FSSSQSVLMKYLSL Trigger: CAGAGACAAATATTTCATGAGTACAGACTGTGATGAGGAAAAGCAAGCCATTCCCTCTCTATCAGGATCCAGAGAAAGAAAAACAAGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657008.1 |
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| CDS TCA 90 bp | CTCAGTGATCACATTTCAATATCTGGAAATCCATTTGGAGGAATGTaGCATTTTAACTATCGTATTGGACTCAGTCTATATGCATTAGCA | + |
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Preference number: 5 (lower is better) Translates to: LSDHISISGNPFGGM*HFNYRIGLSLYALA Trigger: TGCTAATGCATATAGACTGAGTCCAATACGATAGTTAAAATGTCACATTCCTCCAAATGGATTTCCAGATATTGAAATGTGATCACTGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656347.1 |
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| CDS CCA 90 bp | CTAGATGACCAAAGGGTTATACTCATTTGTTTTAATGACACTATATaGACCTCTGCATTCTTAAACAGGATTTTCAAATACACGAGATGC | + |
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Preference number: 5 (lower is better) Translates to: LDDQRVILICFNDTI*TSAFLNRIFKYTRC Trigger: GCATCTCGTGTATTTGAAAATCCTGTTTAAGAATGCAGAGGTCCATATAGTGTCATTAAAACAAATGAGTATAACCCTTTGGTCATCTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000656139.1 ENST00000662548.1 |
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| CDS TCA 72 bp | GGAGAGTCTCAAGGGAGTGGCTTTTCCGCTGAGAAATaGAGACTGCCACATAGCCGCCAGCCGGGCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: GESQGSGFSAEK*RLPHSRQPGLL Trigger: CAGCAAGCCCGGCTGGCGGCTATGTGGCAGTCTTCATTTCTCAGCGGAAAAGCCACTCCCTTGAGACTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000590719.2 ENST00000652115.1 ENST00000662548.1 ENST00000663104.1 ENST00000663477.1 ENST00000666300.1 |
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| CDS GCA 72 bp | GTGTTGAAGGCCTCTCCAGGGCCCCAGAGACAGGGATaGTGGCTGGCATTTATCTCTTTAGGCTTCCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: VLKASPGPQRQG*WLAFISLGFPC Trigger: GCAGGGGAAGCCTAAAGAGATAAATGCCAGCCAGCATCCCTGTCTCTGGGGCCCTGGAGAGGCCTTCAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 14 transcripts: ENST00000588694.6 ENST00000590719.2 ENST00000593056.2 ENST00000652115.1 ENST00000656139.1 ENST00000656347.1 ENST00000657008.1 ENST00000660670.1 ENST00000661915.1 ENST00000662070.1 ENST00000662548.1 ENST00000663104.1 ENST00000663477.1 ENST00000666300.1 |
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| CDS GCA 72 bp | GTGTTGAAGGCCTCTCCAGGGCCCCAGAGACAGGGATaGTGGCTGGCATTTATCTGTTCCAGGAGGAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: VLKASPGPQRQG*WLAFICSRRKG Trigger: TCCCTTCCTCCTGGAACAGATAAATGCCAGCCAGCATCCCTGTCTCTGGGGCCCTGGAGAGGCCTTCAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585739.1 |
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| CDS GCA 72 bp | CTCAAGGGAGTGGCTTTTCCGCTGAGAAATGAAGACTaGCACATAGCCGCCAGCCGGGCTTGCTGTAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LKGVAFPLRNED*HIAASRACCRK Trigger: CTTCCTACAGCAAGCCCGGCTGGCGGCTATGTGGCAGTCTTCATTTCTCAGCGGAAAAGCCACTCCCTTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000590719.2 ENST00000652115.1 ENST00000662548.1 ENST00000663104.1 ENST00000663477.1 ENST00000666300.1 |
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| CDS CCA 72 bp | GTCTCCCCTTTCATGAAGGATTTGCGGGTACTTTGGTaGCAGTCCCTGAATGGGGTGCCTGGAGCCTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: VSPFMKDLRVLW*QSLNGVPGASC Trigger: GCAAGAGGCTCCAGGCACCCCATTCAGGGACTGCCACCAAAGTACCCGCAAATCCTTCATGAAAGGGGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000589110.1 ENST00000652115.1 ENST00000656139.1 ENST00000656347.1 ENST00000657008.1 ENST00000660670.1 ENST00000661915.1 ENST00000663477.1 |
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| CDS CCA 72 bp | ATTCAAACGGTGCAGGGGGACAGCTGCTCCTGGAGATaGATTCAGCCACGGCCTTTTCTTCTCTCGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: IQTVQGDSCSWR*IQPRPFLLSCS Trigger: GCTGCACGAGAGAAGAAAAGGCCGTGGCTGAATCCATCTCCAGGAGCAGCTGTCCCCCTGCACCGTTTGAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000657008.1 ENST00000661915.1 ENST00000662070.1 ENST00000666300.1 |
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| CDS CCA 72 bp | CTCGCAATTCAAACGGTGCAGGGGGACAGCTGCTCCTaGAGATGGATTCAGCCACGGCCTTTTCTTCTCTCG | + |
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Preference number: 6 (lower is better) Translates to: LAIQTVQGDSCS*RWIQPRPFLLS Trigger: CGAGAGAAGAAAAGGCCGTGGCTGAATCCATCTCCAGGAGCAGCTGTCCCCCTGCACCGTTTGAATTGCGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000657008.1 ENST00000661915.1 ENST00000662070.1 ENST00000666300.1 |
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| CDS CAA 72 bp | CAATGTCTCCCCTTTCATGAAGGATTTGCGGGTACTTaGGTGGCAGTCCCTGAATGGGGTGCCTGGAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: QCLPFHEGFAGT*VAVPEWGAWSL Trigger: GAGGCTCCAGGCACCCCATTCAGGGACTGCCACCAAAGTACCCGCAAATCCTTCATGAAAGGGGAGACATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000589110.1 ENST00000652115.1 ENST00000656139.1 ENST00000656347.1 ENST00000657008.1 ENST00000660670.1 ENST00000661915.1 ENST00000663477.1 |
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| CDS CAA 90 bp | TCATCCATGGACCTCAAGGTTTATAGGAGATGCTCGGCCTCTTTGTaGAAGCCACAGGGCAGTGAGGCCAGGTGTGTTGAAGGCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSMDLKVYRRCSASL*KPQGSEARCVEGLS Trigger: GGAGAGGCCTTCAACACACCTGGCCTCACTGCCCTGTGGCTTCAACAAAGAGGCCGAGCATCTCCTATAAACCTTGAGGTCCATGGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000585739.1 ENST00000588694.6 ENST00000590719.2 ENST00000593056.2 ENST00000652115.1 ENST00000656139.1 ENST00000656347.1 ENST00000657008.1 ENST00000660670.1 ENST00000661915.1 ENST00000662070.1 ENST00000662548.1 ENST00000663104.1 ENST00000663477.1 ENST00000666300.1 |
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| CDS CAA 90 bp | TTTGCACGCAAACAGATACCTGCCTTCTCCATGAAGCAGCCATACTaGGGCTCCACTGCAGGTGCTGTTGGTGCTAGGACCTTGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: FARKQIPAFSMKQPY*GSTAGAVGARTLLL Trigger: GAGGAGCAAGGTCCTAGCACCAACAGCACCTGCAGTGGAGCCCAAGTATGGCTGCTTCATGGAGAAGGCAGGTATCTGTTTGCGTGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000590719.2 ENST00000593056.2 ENST00000662548.1 ENST00000663104.1 ENST00000666300.1 |
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| CDS CAA 90 bp | CTTTTGCACCTTGCCCAGAGGTGGGTGACTGCCTCTTCCTTGTCCTaGGCATCTCTGTCCAAATGTCTTTCCCTCAGAGAGGCCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LLHLAQRWVTASSLS*ASLSKCLSLREALE Trigger: CTCCAAGGCCTCTCTGAGGGAAAGACATTTGGACAGAGATGCCAAGGACAAGGAAGAGGCAGTCACCCACCTCTGGGCAAGGTGCAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656347.1 |
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| CDS GCA 72 bp | TGGTGGCAGTCCCTGAATGGGGTGCCTGGAGCCTCTTaGTTTTCTGTTGAAATCAGAAGGCATTGCATCGGG | + |
|
Preference number: 6 (lower is better) Translates to: WWQSLNGVPGAS*FSVEIRRHCIG Trigger: CCCGATGCAATGCCTTCTGATTTCAACAGAAAAGCAAGAGGCTCCAGGCACCCCATTCAGGGACTGCCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000589110.1 ENST00000652115.1 ENST00000656139.1 ENST00000656347.1 ENST00000657008.1 ENST00000660670.1 ENST00000661915.1 ENST00000663477.1 |
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| CDS GCA 72 bp | TCTTTCCTCGCAATTCAAACGGTGCAGGGGGACAGCTaGTCCTGGAGATGGATTCAGCCACGGCCTTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SFLAIQTVQGDS*SWRWIQPRPFL Trigger: AAGAAAAGGCCGTGGCTGAATCCATCTCCAGGAGCAGCTGTCCCCCTGCACCGTTTGAATTGCGAGGAAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000657008.1 ENST00000661915.1 ENST00000662070.1 ENST00000666300.1 |
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| CDS GCA 72 bp | TCTTGGGCTTTTGCACCTTGCCCAGAGGTGGGTGACTaGCTCTTCCTTGTCCTTGGCATCTCTGTCCAAATG | + |
|
Preference number: 6 (lower is better) Translates to: SWAFAPCPEVGD*LFLVLGISVQM Trigger: CATTTGGACAGAGATGCCAAGGACAAGGAAGAGGCAGTCACCCACCTCTGGGCAAGGTGCAAAAGCCCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656347.1 |
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| CDS CCA 72 bp | AATGTCTCCCCTTTCATGAAGGATTTGCGGGTACTTTaGTGGCAGTCCCTGAATGGGGTGCCTGGAGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: NVSPFMKDLRVL*WQSLNGVPGAS Trigger: AGAGGCTCCAGGCACCCCATTCAGGGACTGCCACCAAAGTACCCGCAAATCCTTCATGAAAGGGGAGACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000589110.1 ENST00000652115.1 ENST00000656139.1 ENST00000656347.1 ENST00000657008.1 ENST00000660670.1 ENST00000661915.1 ENST00000663477.1 |
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| CDS CCA 72 bp | CCAGTGGAGGCCAAGAGTCTGGCTTGTGGATGGGCATaGCTTTTGCCCAGCATAACAACTCAGAATGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PVEAKSLACGWA*LLPSITTQNVW Trigger: CCACACATTCTGAGTTGTTATGCTGGGCAAAAGCCATGCCCATCCACAAGCCAGACTCTTGGCCTCCACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589110.1 |
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| CDS CAA 90 bp | ATGTCATCCATGGACCTCAAGGTTTATAGGAGATGCTCGGCCTCTTaGTTGAAGCCACAGGGCAGTGAGGCCAGGTGTGTTGAAGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: MSSMDLKVYRRCSAS*LKPQGSEARCVEGL Trigger: GAGGCCTTCAACACACCTGGCCTCACTGCCCTGTGGCTTCAACAAAGAGGCCGAGCATCTCCTATAAACCTTGAGGTCCATGGATGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000585739.1 ENST00000588694.6 ENST00000590719.2 ENST00000593056.2 ENST00000652115.1 ENST00000656139.1 ENST00000656347.1 ENST00000657008.1 ENST00000660670.1 ENST00000661915.1 ENST00000662070.1 ENST00000662548.1 ENST00000663104.1 ENST00000663477.1 ENST00000666300.1 |
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| CDS GCA 72 bp | AGAAATGAAGACTGCCACATAGCCGCCAGCCGGGCTTaGTGTAGGAAGCTTACAATTCAGCTCTCTTCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RNEDCHIAASRA*CRKLTIQLSSV Trigger: CACCGAAGAGAGCTGAATTGTAAGCTTCCTACAGCAAGCCCGGCTGGCGGCTATGTGGCAGTCTTCATTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000590719.2 ENST00000652115.1 ENST00000662548.1 ENST00000663104.1 ENST00000663477.1 ENST00000666300.1 |
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| CDS GCA 72 bp | AGGGAAGAGATTTGGAAGCGTTTTGGCAGATTCGGATaGACGGACCGACCTGCGCCAGGTTCTTCTAACGTT | + |
|
Preference number: 6 (lower is better) Translates to: REEIWKRFGRFG*TDRPAPGSSNV Trigger: AACGTTAGAAGAACCTGGCGCAGGTCGGTCCGTGCATCCGAATCTGCCAAAACGCTTCCAAATCTCTTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662070.1 |
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| CDS CAA 72 bp | ATGGACCTCAAGGTTTATAGGAGATGCTCGGCCTCTTaGTTGAAGCCACAGGGCAGTGAGGCCAGGTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: MDLKVYRRCSAS*LKPQGSEARCV Trigger: AACACACCTGGCCTCACTGCCCTGTGGCTTCAACAAAGAGGCCGAGCATCTCCTATAAACCTTGAGGTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000585739.1 ENST00000588694.6 ENST00000590719.2 ENST00000593056.2 ENST00000652115.1 ENST00000656139.1 ENST00000656347.1 ENST00000657008.1 ENST00000660670.1 ENST00000661915.1 ENST00000662070.1 ENST00000662548.1 ENST00000663104.1 ENST00000663477.1 ENST00000666300.1 |
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| CDS CAA 72 bp | TCCCAGAAGCTGAACTTCCAGTTGACAGCTGGCAGGTaGTTGCTGAGATGGTGGTTGCTGGAAAGGTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: SQKLNFQLTAGR*LLRWWLLERCI Trigger: GATGCACCTTTCCAGCAACCACCATCTCAGCAACAACCTGCCAGCTGTCAACTGGAAGTTCAGCTTCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000585739.1 ENST00000590719.2 ENST00000593056.2 ENST00000652115.1 ENST00000656139.1 ENST00000656347.1 ENST00000657008.1 ENST00000660670.1 ENST00000661915.1 ENST00000662548.1 ENST00000663104.1 ENST00000663477.1 ENST00000666300.1 |
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| CDS CAA 72 bp | AGTTCCAAAGCTTCCAGTGGAGGCCAAGAGTCTGGCTaGTGGATGGGCATGGCTTTTGCCCAGCATAACAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSKASSGGQESG*WMGMAFAQHNN Trigger: GTTGTTATGCTGGGCAAAAGCCATGCCCATCCACAAGCCAGACTCTTGGCCTCCACTGGAAGCTTTGGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589110.1 |
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| CDS CAA 72 bp | TTGTGCTTGCAACACATGAACGTGAATCTTGGGCTTTaGCACCTTGCCCAGAGGTGGGTGACTGCCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LCLQHMNVNLGL*HLAQRWVTASS Trigger: GGAAGAGGCAGTCACCCACCTCTGGGCAAGGTGCAAAAGCCCAAGATTCACGTTCATGTGTTGCAAGCACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656347.1 |
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| CDS CAA 90 bp | GCTTCCATAATACGGCGTGTTACCATATGGCAAAGCAGAAGCAAGTaGGAGCCTGGAAGAAATGACCCATGTGGTGTCTTAGGCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ASIIRRVTIWQSRSK*EPGRNDPCGVLGQG Trigger: GCCCTGGCCTAAGACACCACATGGGTCATTTCTTCCAGGCTCCAACTTGCTTCTGCTTTGCCATATGGTAACACGCCGTATTATGGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000588694.6 ENST00000593056.2 ENST00000652115.1 ENST00000656139.1 ENST00000661915.1 ENST00000662070.1 ENST00000663104.1 ENST00000666300.1 |
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| CDS CAA 90 bp | CTTCCAGTGGAGGCCAAGAGTCTGGCTTGTGGATGGGCATGGCTTTaGCCCAGCATAACAACTCAGAATGTGTGGATTTATCGGACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LPVEAKSLACGWAWL*PSITTQNVWIYRTP Trigger: AGGAGTCCGATAAATCCACACATTCTGAGTTGTTATGCTGGGCAAAAGCCATGCCCATCCACAAGCCAGACTCTTGGCCTCCACTGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589110.1 |
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| CDS CAA 90 bp | AGTGATCACATTTCAATATCTGCCTTCTCCATGAAGCAGCCATACTaGGGCTCCACTGCAGGTGCTGTTGGTGCTAGGACCTTGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SDHISISAFSMKQPY*GSTAGAVGARTLLL Trigger: GAGGAGCAAGGTCCTAGCACCAACAGCACCTGCAGTGGAGCCCAAGTATGGCTGCTTCATGGAGAAGGCAGATATTGAAATGTGATCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000652115.1 ENST00000656139.1 ENST00000657008.1 ENST00000660670.1 ENST00000661915.1 ENST00000663477.1 |
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| CDS TCA 72 bp | TCGGACTCCTTAATCTGTCAGGCTGTAAGTCCTGGATaGGGTCTGTGGCTCCTGACTCAAGAGATGGCACAA | + |
|
Preference number: 6 (lower is better) Translates to: SDSLICQAVSPG*GLWLLTQEMAQ Trigger: TTGTGCCATCTCTTGAGTCAGGAGCCACAGACCTCATCCAGGACTTACAGCCTGACAGATTAAGGAGTCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589110.1 |
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| CDS CAA 72 bp | ATTTCAATATCTGCCTTCTCCATGAAGCAGCCATACTaGGGCTCCACTGCAGGTGCTGTTGGTGCTAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: ISISAFSMKQPY*GSTAGAVGART Trigger: GGTCCTAGCACCAACAGCACCTGCAGTGGAGCCCAAGTATGGCTGCTTCATGGAGAAGGCAGATATTGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000652115.1 ENST00000656139.1 ENST00000657008.1 ENST00000660670.1 ENST00000661915.1 ENST00000663477.1 |
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| CDS TCA 72 bp | AGGCTGGTGACTGAGCCAGCAGTGCAGGAGAGTGGATaGTACCAAGTATGTTCATCTCCATGCCAGAGAATA | + |
|
Preference number: 6 (lower is better) Translates to: RLVTEPAVQESG*YQVCSSPCQRI Trigger: TATTCTCTGGCATGGAGATGAACATACTTGGTATCATCCACTCTCCTGCACTGCTGGCTCAGTCACCAGCCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589110.1 |
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| CDS TCA 72 bp | CTTTTCTTCTCTCGTGCAGCTAAGCCAAGCCAGGTATaGAAACGGTGCTCCCTTCCCCTTCTCAGACATCTT | + |
|
Preference number: 6 (lower is better) Translates to: LFFSRAAKPSQV*KRCSLPLLRHL Trigger: AAGATGTCTGAGAAGGGGAAGGGAGCACCGTTTTCATACCTGGCTTGGCTTAGCTGCACGAGAGAAGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000657008.1 ENST00000661915.1 ENST00000662070.1 ENST00000666300.1 |
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| CDS GCA 72 bp | TCTAAAACTGTAACTCTTTCCTCGCAATTCAAACGGTaGAGGGGGACAGCTGCTCCTGGAGATGGATTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SKTVTLSSQFKR*RGTAAPGDGFS Trigger: GCTGAATCCATCTCCAGGAGCAGCTGTCCCCCTGCACCGTTTGAATTGCGAGGAAAGAGTTACAGTTTTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000657008.1 ENST00000661915.1 ENST00000662070.1 ENST00000666300.1 |
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| CDS CCA 72 bp | TTTATCGGACTCCTTAATCTGTCAGGCTGTAAGTCCTaGATGAGGTCTGTGGCTCCTGACTCAAGAGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: FIGLLNLSGCKS*MRSVAPDSRDG Trigger: GCCATCTCTTGAGTCAGGAGCCACAGACCTCATCCAGGACTTACAGCCTGACAGATTAAGGAGTCCGATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589110.1 |
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| CDS CCA 72 bp | CTTCTTTTTGTGCTTGCAACACATGAACGTGAATCTTaGGCTTTTGCACCTTGCCCAGAGGTGGGTGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: LLFVLATHERES*AFAPCPEVGDC Trigger: GCAGTCACCCACCTCTGGGCAAGGTGCAAAAGCCCAAGATTCACGTTCATGTGTTGCAAGCACAAAAAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656347.1 |
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| CDS CAA 90 bp | ATCTTCTTTTTGTGCTTGCAACACATGAACGTGAATCTTGGGCTTTaGCACCTTGCCCAGAGGTGGGTGACTGCCTCTTCCTTGTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: IFFLCLQHMNVNLGL*HLAQRWVTASSLSL Trigger: CAAGGACAAGGAAGAGGCAGTCACCCACCTCTGGGCAAGGTGCAAAAGCCCAAGATTCACGTTCATGTGTTGCAAGCACAAAAAGAAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656347.1 |
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| CDS GCA 72 bp | AAATATCACCTCTTGACCATGGCTTACAAGGCCTCATaGGACCTTGTTTTTGCCACTTTCTCTGCCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KYHLLTMAYKAS*DLVFATFSALC Trigger: GCAGAGGGCAGAGAAAGTGGCAAAAACAAGGTCGCATGAGGCCTTGTAAGCCATGGTCAAGAGGTGATATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656347.1 |
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| CDS CAA 72 bp | AAAGAATGTGTCAATGTCTCCCCTTTCATGAAGGATTaGCGGGTACTTTGGTGGCAGTCCCTGAATGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: KECVNVSPFMKD*RVLWWQSLNGV Trigger: CACCCCATTCAGGGACTGCCACCAAAGTACCCGCAAATCCTTCATGAAAGGGGAGACATTGACACATTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000589110.1 ENST00000652115.1 ENST00000656139.1 ENST00000656347.1 ENST00000657008.1 ENST00000660670.1 ENST00000661915.1 ENST00000663477.1 |
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| CDS CAA 72 bp | GAGGCCAAGAGTCTGGCTTGTGGATGGGCATGGCTTTaGCCCAGCATAACAACTCAGAATGTGTGGATTTAT | + |
|
Preference number: 6 (lower is better) Translates to: EAKSLACGWAWL*PSITTQNVWIY Trigger: ATAAATCCACACATTCTGAGTTGTTATGCTGGGCAAAAGCCATGCCCATCCACAAGCCAGACTCTTGGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589110.1 |
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| CDS CAA 72 bp | TGGGTGTCCAGGTACGCGGGGAAATCCGTAAAACCGTaGACCAAGCACAATGTACGTAGACAAATGTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: WVSRYAGKSVKP*TKHNVRRQMSS Trigger: AGAAGACATTTGTCTACGTACATTGTGCTTGGTCAACGGTTTTACGGATTTCCCCGCGTACCTGGACACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000588694.6 ENST00000663104.1 |
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| CDS CAA 72 bp | TTTCTGTTGAAATCAGAAGGCATTGCATCGGGGAGTTaGAGAGCAAAGGGATTCCCACTGAGCCTCAGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: FLLKSEGIASGS*RAKGFPLSLSD Trigger: ATCACTGAGGCTCAGTGGGAATCCCTTTGCTCTCAAACTCCCCGATGCAATGCCTTCTGATTTCAACAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000652115.1 ENST00000656139.1 ENST00000656347.1 ENST00000657008.1 ENST00000660670.1 ENST00000661915.1 ENST00000663477.1 |
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| CDS CAA 90 bp | GGGCTTGCTGTAGGAAGCTTACAATTCAGCTCTCTTCGGTGGAGTTaGAAGTTAAATGGTCCTGTCTGCTTCTTCTCTTGTTTGTGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: GLAVGSLQFSSLRWS*KLNGPVCFFSCLCH Trigger: GTGACACAAACAAGAGAAGAAGCAGACAGGACCATTTAACTTCAAACTCCACCGAAGAGAGCTGAATTGTAAGCTTCCTACAGCAAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000590719.2 ENST00000652115.1 ENST00000662548.1 ENST00000663104.1 ENST00000663477.1 ENST00000666300.1 |
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| CDS GCA 72 bp | CTTCTTCCAGCACAAGCTCACATTGCTTATAACATCTaGCTGGTGGCTCAGTCTTCTTATTGGAAGTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLPAQAHIAYNI*LVAQSSYWKCL Trigger: CAGACACTTCCAATAAGAAGACTGAGCCACCAGGCAGATGTTATAAGCAATGTGAGCTTGTGCTGGAAGAAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656347.1 |
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| CDS GCA 72 bp | TCCTCACTCTACTCCAGCCACAGGATCTTCTTTTTGTaGTTGCAACACATGAACGTGAATCTTGGGCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSLYSSHRIFFL*LQHMNVNLGLL Trigger: CAAAAGCCCAAGATTCACGTTCATGTGTTGCAAGCACAAAAAGAAGATCCTGTGGCTGGAGTAGAGTGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656347.1 |
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| CDS CCA 72 bp | CCTTTTCTGAAATCCATCATTCCGCTATGTCATCCATaGACCTCAAGGTTTATAGGAGATGCTCGGCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PFLKSIIPLCHP*TSRFIGDARPL Trigger: AAGAGGCCGAGCATCTCCTATAAACCTTGAGGTCCATGGATGACATAGCGGAATGATGGATTTCAGAAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000593056.2 ENST00000652115.1 ENST00000656139.1 ENST00000657008.1 ENST00000660670.1 ENST00000661915.1 ENST00000662070.1 ENST00000662548.1 ENST00000663104.1 ENST00000666300.1 |
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| CDS CCA 72 bp | GCTTTTCTGAAATCCATCATTCCGCTATGTCATCCATaGACCTCAAGGTTTATAGGAGATGCTCGGCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: AFLKSIIPLCHP*TSRFIGDARPL Trigger: AAGAGGCCGAGCATCTCCTATAAACCTTGAGGTCCATGGATGACATAGCGGAATGATGGATTTCAGAAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000588694.6 ENST00000590719.2 ENST00000663477.1 |
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| CDS CAA 72 bp | GATTTTCAAATACACGAGATGCAAGCACTCACGGATTaGCACGCAAACAGATACCTTCTCCATGAAGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: DFQIHEMQALTD*HANRYLLHEAA Trigger: GGCTGCTTCATGGAGAAGGTATCTGTTTGCGTGCAAATCCGTGAGTGCTTGCATCTCGTGTATTTGAAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585739.1 |
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| CDS TCA 72 bp | GAGTTTGAGAGCAAAGGGATTCCCACTGAGCCTCAGTaGTCACATTTCAATATCTGGAAATCCATTTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: EFESKGIPTEPQ*SHFNIWKSIWR Trigger: CCTCCAAATGGATTTCCAGATATTGAAATGTGATCACTGAGGCTCAGTGGGAATCCCTTTGCTCTCAAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656347.1 |
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| CDS GCA 72 bp | CAGTGTGCTCTGGATCCTGATAGAGAGGGAATGGCTTaGTTTTCCTCATCACAGTCTGTACTCATGAAATAT | + |
|
Preference number: 6 (lower is better) Translates to: QCALDPDREGMA*FSSSQSVLMKY Trigger: ATATTTCATGAGTACAGACTGTGATGAGGAAAAGCAAGCCATTCCCTCTCTATCAGGATCCAGAGCACACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000593056.2 ENST00000652115.1 ENST00000660670.1 ENST00000661915.1 ENST00000662070.1 ENST00000662548.1 ENST00000663104.1 ENST00000666300.1 |
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| CDS CCA 72 bp | AATGATGGTGCTTCCATAATACGGCGTGTTACCATATaGCAAAGCAGAAGCAAGTTGGAGCCTGGAAGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: NDGASIIRRVTI*QSRSKLEPGRN Trigger: ATTTCTTCCAGGCTCCAACTTGCTTCTGCTTTGCCATATGGTAACACGCCGTATTATGGAAGCACCATCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000588694.6 ENST00000590719.2 ENST00000593056.2 ENST00000652115.1 ENST00000656139.1 ENST00000656347.1 ENST00000657008.1 ENST00000660670.1 ENST00000661915.1 ENST00000662070.1 ENST00000662548.1 ENST00000663104.1 ENST00000663477.1 ENST00000666300.1 |
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| CDS CCA 72 bp | TCTTTTCTGAAATCCATCATTCCGCTATGTCATCCATaGACCTCAAGGTTTATAGGAGATGCTCGGCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SFLKSIIPLCHP*TSRFIGDARPL Trigger: AAGAGGCCGAGCATCTCCTATAAACCTTGAGGTCCATGGATGACATAGCGGAATGATGGATTTCAGAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585739.1 ENST00000656347.1 |
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| CDS CCA 72 bp | CTTGCTGTAGGAAGCTTACAATTCAGCTCTCTTCGGTaGAGTTTGAAGTTAAATGGTCCTGTCTGCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LAVGSLQFSSLR*SLKLNGPVCFF Trigger: GAAGAAGCAGACAGGACCATTTAACTTCAAACTCCACCGAAGAGAGCTGAATTGTAAGCTTCCTACAGCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000590719.2 ENST00000652115.1 ENST00000662548.1 ENST00000663104.1 ENST00000663477.1 ENST00000666300.1 |
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| CDS CAA 72 bp | GTAGGAAGCTTACAATTCAGCTCTCTTCGGTGGAGTTaGAAGTTAAATGGTCCTGTCTGCTTCTTCTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: VGSLQFSSLRWS*KLNGPVCFFSC Trigger: ACAAGAGAAGAAGCAGACAGGACCATTTAACTTCAAACTCCACCGAAGAGAGCTGAATTGTAAGCTTCCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000590719.2 ENST00000652115.1 ENST00000662548.1 ENST00000663104.1 ENST00000663477.1 ENST00000666300.1 |
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| CDS GCA 72 bp | TCTGCATTCTTAAACAGGATTTTCAAATACACGAGATaGAAGCACTCACGGATTTGCACGCAAACAGATACC | + |
|
Preference number: 6 (lower is better) Translates to: SAFLNRIFKYTR*KHSRICTQTDT Trigger: GGTATCTGTTTGCGTGCAAATCCGTGAGTGCTTGCATCTCGTGTATTTGAAAATCCTGTTTAAGAATGCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000585739.1 ENST00000590719.2 ENST00000593056.2 ENST00000652115.1 ENST00000656139.1 ENST00000657008.1 ENST00000660670.1 ENST00000661915.1 ENST00000662548.1 ENST00000663104.1 ENST00000663477.1 ENST00000666300.1 |
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| CDS CAA 72 bp | GCCTCAGTGATCACATTTCAATATCTGGAAATCCATTaGGAGGAATGTGACATTTTAACTATCGTATTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ASVITFQYLEIH*EECDILTIVLD Trigger: GTCCAATACGATAGTTAAAATGTCACATTCCTCCAAATGGATTTCCAGATATTGAAATGTGATCACTGAGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656347.1 |
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