Pregenerated sensors for LINC01531 (Homo sapiens)
Ensembl gene IDs: ENSG00000205786Ensembl transcript IDs: ENST00000441942.6, ENST00000536898.5, ENST00000600405.1, ENST00000601669.6, ENST00000602468.5, ENST00000602653.5, ENST00000602796.5
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCCAGAGCTTTCACCACCACCCAGACAGTGAGACCCCCGCCGTGCTaGCACCTCCGTGGCCCTCTGTCAAAGGCTTTGCGCACGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: SRAFTTTQTVRPPPC*HLRGPLSKALRTVE Trigger: CTCCACCGTGCGCAAAGCCTTTGACAGAGGGCCACGGAGGTGGCAGCACGGCGGGGGTCTCACTGTCTGGGTGGTGGTGAAAGCTCTGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS GCA 90 bp | CTCTCCAGAGCTTTCACCACCACCCAGACAGTGAGACCCCCGCCGTaGTGCCACCTCCGTGGCCCTCTGTCAAAGGCTTTGCGCACGGTG | + |
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Preference number: 5 (lower is better) Translates to: LSRAFTTTQTVRPPP*CHLRGPLSKALRTV Trigger: CACCGTGCGCAAAGCCTTTGACAGAGGGCCACGGAGGTGGCAGCACGGCGGGGGTCTCACTGTCTGGGTGGTGGTGAAAGCTCTGGAGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS CCA 90 bp | CACCACCACCCAGACAGTGAGACCCCCGCCGTGCTGCCACCTCCGTaGCCCTCTGTCAAAGGCTTTGCGCACGGTGGAGGAAGAGAAACA | + |
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Preference number: 5 (lower is better) Translates to: HHHPDSETPAVLPPP*PSVKGFAHGGGRET Trigger: TGTTTCTCTTCCTCCACCGTGCGCAAAGCCTTTGACAGAGGGCCACGGAGGTGGCAGCACGGCGGGGGTCTCACTGTCTGGGTGGTGGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS GCA 90 bp | CTTGCCTGGTTTGTCCACCTGTGCCAGCCACTGCTTTGTTTCGGGTaGCGGTCCTTTGAGTCCACATGCAGGCTCCTGCCTTGCTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: LAWFVHLCQPLLCFG*RSFESTCRLLPCSP Trigger: TGGGGAGCAAGGCAGGAGCCTGCATGTGGACTCAAAGGACCGGCACCCGAAACAAAGCAGTGGCTGGCACAGGTGGACAAACCAGGCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000441942.6 ENST00000536898.5 ENST00000601669.6 ENST00000602468.5 ENST00000602653.5 ENST00000602796.5 |
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| CDS TCA 90 bp | CCCACCATGGGAGACAAAGCACAGGGTCCAAGCAGACCAGGAAGTTaGAGAGGGTCACGGCAGCCAGTCTCTTGGCTCTTCAGCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: PTMGDKAQGPSRPGS*RGSRQPVSWLFSTS Trigger: GGAGGTGCTGAAGAGCCAAGAGACTGGCTGCCGTGACCCTCTTCAACTTCCTGGTCTGCTTGGACCCTGTGCTTTGTCTCCCATGGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS CCA 90 bp | GGTTCCTGTGAGGGTCTCGGGTCCTTCTTTGAACTCCCTTTCCTCTaGGCAGGTCGTGCATGCCTGGGTCACTCCCCACCACTCATTACC | + |
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Preference number: 5 (lower is better) Translates to: GSCEGLGSFFELPFL*AGRACLGHSPPLIT Trigger: GGTAATGAGTGGTGGGGAGTGACCCAGGCATGCACGACCTGCCCAGAGGAAAGGGAGTTCAAAGAAGGACCCGAGACCCTCACAGGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS GCA 90 bp | TGCTTTGTTTCGGGTGCCGGTCCTTTGAGTCCACATGCAGGCTCCTaGCTTGCTCCCCAGACTTGCCTGTGCTGGGTTGTTCAGATCCAG | + |
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Preference number: 5 (lower is better) Translates to: CFVSGAGPLSPHAGS*LAPQTCLCWVVQIQ Trigger: CTGGATCTGAACAACCCAGCACAGGCAAGTCTGGGGAGCAAGGCAGGAGCCTGCATGTGGACTCAAAGGACCGGCACCCGAAACAAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000441942.6 ENST00000536898.5 ENST00000601669.6 ENST00000602468.5 ENST00000602653.5 ENST00000602796.5 |
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| CDS CCA 90 bp | CCCATCACGTGGACTCTGCTCCGAAGGACAGTTGCTTTTCTTGCCTaGTTTGTCCACCTGTGCCAGCCACTGCTTTGTTTCGGGTGCCGG | + |
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Preference number: 5 (lower is better) Translates to: PITWTLLRRTVAFLA*FVHLCQPLLCFGCR Trigger: CCGGCACCCGAAACAAAGCAGTGGCTGGCACAGGTGGACAAACCAGGCAAGAAAAGCAACTGTCCTTCGGAGCAGAGTCCACGTGATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000441942.6 ENST00000536898.5 ENST00000601669.6 ENST00000602468.5 ENST00000602653.5 ENST00000602796.5 |
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| CDS CCA 90 bp | TCTGCATTCGAGAACTTCAGAAGTAGAGGACCAGATGAATGGGAGTaGCCCTGCCGCCACGGGGCTGAGCTCCACCGCTTTTGTCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: SAFENFRSRGPDEWE*PCRHGAELHRFCPA Trigger: AGCAGGACAAAAGCGGTGGAGCTCAGCCCCGTGGCGGCAGGGCCACTCCCATTCATCTGGTCCTCTACTTCTGAAGTTCTCGAATGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS TCA 90 bp | TGCAGCATCGAGAGCACTGAACAACACTGCGCCTGCCCACCAATTTaGCTCTTCCACTGGGGGAACCCACCATGGGAGACAAAGCACAGG | + |
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Preference number: 5 (lower is better) Translates to: CSIESTEQHCACPPI*LFHWGNPPWETKHR Trigger: CCTGTGCTTTGTCTCCCATGGTGGGTTCCCCCAGTGGAAGAGTCAAATTGGTGGGCAGGCGCAGTGTTGTTCAGTGCTCTCGATGCTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS GCA 90 bp | GGACAGTTGCTTTTCTTGCCTGGTTTGTCCACCTGTGCCAGCCACTaGTTTGTTTCGGGTGCCGGTCCTTTGAGTCCACATGCAGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: GQLLFLPGLSTCASH*FVSGAGPLSPHAGS Trigger: GGAGCCTGCATGTGGACTCAAAGGACCGGCACCCGAAACAAAGCAGTGGCTGGCACAGGTGGACAAACCAGGCAAGAAAAGCAACTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000441942.6 ENST00000536898.5 ENST00000601669.6 ENST00000602468.5 ENST00000602653.5 ENST00000602796.5 |
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| CDS CCA 90 bp | AGGCAAGGAGTGGAGAGGTGGGGCACTCCTTTACCCCTGGAGTCCTaGGGAAAGTGTCTGTCCTGGATACATCTGGCACTTGTGCCAATC | + |
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Preference number: 5 (lower is better) Translates to: RQGVERWGTPLPLES*GKCLSWIHLALVPI Trigger: GATTGGCACAAGTGCCAGATGTATCCAGGACAGACACTTTCCCCAGGACTCCAGGGGTAAAGGAGTGCCCCACCTCTCCACTCCTTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS GCA 90 bp | CTGCTCCGAAGGACAGTTGCTTTTCTTGCCTGGTTTGTCCACCTGTaGCAGCCACTGCTTTGTTTCGGGTGCCGGTCCTTTGAGTCCACA | + |
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Preference number: 5 (lower is better) Translates to: LLRRTVAFLAWFVHL*QPLLCFGCRSFEST Trigger: TGTGGACTCAAAGGACCGGCACCCGAAACAAAGCAGTGGCTGGCACAGGTGGACAAACCAGGCAAGAAAAGCAACTGTCCTTCGGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000441942.6 ENST00000536898.5 ENST00000601669.6 ENST00000602468.5 ENST00000602653.5 ENST00000602796.5 |
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| CDS CCA 90 bp | TCTCATTCTGCATTCGAGAACTTCAGAAGTAGAGGACCAGATGAATaGGAGTGGCCCTGCCGCCACGGGGCTGAGCTCCACCGCTTTTGT | + |
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Preference number: 5 (lower is better) Translates to: SHSAFENFRSRGPDE*EWPCRHGAELHRFC Trigger: ACAAAAGCGGTGGAGCTCAGCCCCGTGGCGGCAGGGCCACTCCCATTCATCTGGTCCTCTACTTCTGAAGTTCTCGAATGCAGAATGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS GCA 90 bp | TCTTCCCATCACGTGGACTCTGCTCCGAAGGACAGTTGCTTTTCTTaGCTGGTTTGTCCACCTGTGCCAGCCACTGCTTTGTTTCGGGTG | + |
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Preference number: 5 (lower is better) Translates to: SSHHVDSAPKDSCFS*LVCPPVPATALFRV Trigger: CACCCGAAACAAAGCAGTGGCTGGCACAGGTGGACAAACCAGGCAAGAAAAGCAACTGTCCTTCGGAGCAGAGTCCACGTGATGGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000441942.6 ENST00000536898.5 ENST00000601669.6 ENST00000602468.5 ENST00000602653.5 ENST00000602796.5 |
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| CDS GCA 90 bp | GTGTCTGTTTCTTCCCATCACGTGGACTCTGCTCCGAAGGACAGTTaGTTTTCTTGCCTGGTTTGTCCACCTGTGCCAGCCACTGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: VSVSSHHVDSAPKDS*FSCLVCPPVPATAL Trigger: CAAAGCAGTGGCTGGCACAGGTGGACAAACCAGGCAAGAAAAGCAACTGTCCTTCGGAGCAGAGTCCACGTGATGGGAAGAAACAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000536898.5 ENST00000601669.6 ENST00000602653.5 ENST00000602796.5 |
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| CDS GCA 90 bp | CCACTCAAAAGTATCATGACCTGTTTCTTCCCATCACGTGGACTCTaGTCCGAAGGACAGTTGCTTTTCTTGCCTGGTTTGTCCACCTGT | + |
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Preference number: 5 (lower is better) Translates to: PLKSIMTCFFPSRGL*SEGQLLFLPGLSTC Trigger: ACAGGTGGACAAACCAGGCAAGAAAAGCAACTGTCCTTCGGAGCAGAGTCCACGTGATGGGAAGAAACAGGTCATGATACTTTTGAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000441942.6 ENST00000602468.5 |
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| CDS CCA 90 bp | CCTTGCCTTTTCCTGCAGGTAGATGGGTGGGTTTTCAAAGATGTCTaGTTTCAGAAGCCGGTGGCATCTTGTCTAACTGGACCACCTTTT | + |
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Preference number: 5 (lower is better) Translates to: PCLFLQVDGWVFKDV*FQKPVASCLTGPPF Trigger: AAAAGGTGGTCCAGTTAGACAAGATGCCACCGGCTTCTGAAACCAGACATCTTTGAAAACCCACCCATCTACCTGCAGGAAAAGGCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS TCA 90 bp | GTGAGATCCATATGCCGAAATGAAACTTTCAGCCACCTGTCTCCATaGCTCAGCTCTGCTTCTCTATGCTGGCTTTGCTCTCAGGCAAAT | + |
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Preference number: 5 (lower is better) Translates to: VRSICRNETFSHLSP*LSSASLCWLCSQAN Trigger: ATTTGCCTGAGAGCAAAGCCAGCATAGAGAAGCAGAGCTGAGTCATGGAGACAGGTGGCTGAAAGTTTCATTTCGGCATATGGATCTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000600405.1 ENST00000601669.6 |
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| CDS CCA 90 bp | AAGACCCTTTTCCTGCAGGTAGATGGGTGGGTTTTCAAAGATGTCTaGTTTCAGAAGCCGGTGGCATCTTGTCTAACTGGACCACCTTTT | + |
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Preference number: 5 (lower is better) Translates to: KTLFLQVDGWVFKDV*FQKPVASCLTGPPF Trigger: AAAAGGTGGTCCAGTTAGACAAGATGCCACCGGCTTCTGAAACCAGACATCTTTGAAAACCCACCCATCTACCTGCAGGAAAAGGGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602653.5 |
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| CDS CCA 90 bp | CTCTTCTCCAATCAAAGCTGTAGTTGTGGCTGGTGGAACAGAGGCTaGAGGTCAGTTATTCAGCATCTGCAGGAGCTTCCAAATGTTTCA | + |
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Preference number: 5 (lower is better) Translates to: LFSNQSCSCGWWNRG*RSVIQHLQELPNVS Trigger: TGAAACATTTGGAAGCTCCTGCAGATGCTGAATAACTGACCTCCAGCCTCTGTTCCACCAGCCACAACTACAGCTTTGATTGGAGAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000601669.6 ENST00000602468.5 |
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| CDS CCA 90 bp | GATGTAACCACTCAAAAGTATCATGACCTGTTTCTTCCCATCACGTaGACTCTGCTCCGAAGGACAGTTGCTTTTCTTGCCTGGTTTGTC | + |
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Preference number: 5 (lower is better) Translates to: DVTTQKYHDLFLPIT*TLLRRTVAFLAWFV Trigger: GACAAACCAGGCAAGAAAAGCAACTGTCCTTCGGAGCAGAGTCCACGTGATGGGAAGAAACAGGTCATGATACTTTTGAGTGGTTACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602468.5 |
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| CDS TCA 90 bp | AAAGAAGGCACAAACACAGTAGGATGTAACCACTCAAAAGTATCATaGCCTGTTTCTTCCCATCACGTGGACTCTGCTCCGAAGGACAGT | + |
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Preference number: 5 (lower is better) Translates to: KEGTNTVGCNHSKVS*PVSSHHVDSAPKDS Trigger: ACTGTCCTTCGGAGCAGAGTCCACGTGATGGGAAGAAACAGGTCATGATACTTTTGAGTGGTTACATCCTACTGTGTTTGTGCCTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602468.5 |
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| CDS TCA 72 bp | GCTGGCTCTCCAGAGCTTTCACCACCACCCAGACAGTaGGACCCCCGCCGTGCTGCCACCTCCGTGGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: AGSPELSPPPRQ*DPRRAATSVAL Trigger: GAGGGCCACGGAGGTGGCAGCACGGCGGGGGTCTCACTGTCTGGGTGGTGGTGAAAGCTCTGGAGAGCCAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS CCA 72 bp | CCAGACAGTGAGACCCCCGCCGTGCTGCCACCTCCGTaGCCCTCTGTCAAAGGCTTTGCGCACGGTGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: PDSETPAVLPPP*PSVKGFAHGGG Trigger: TCCTCCACCGTGCGCAAAGCCTTTGACAGAGGGCCACGGAGGTGGCAGCACGGCGGGGGTCTCACTGTCTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS TCA 72 bp | GTGGTGGGTGCCTGTAATCCCAGCTACCCGGGAGGCTaGGGCAGGAGAACCCAGGAGGCGGAGGTTGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: VVGACNPSYPGG*GRRTQEAEVAV Trigger: CACTGCAACCTCCGCCTCCTGGGTTCTCCTGCCTCAGCCTCCCGGGTAGCTGGGATTACAGGCACCCACCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS GCA 72 bp | TTCACCACCACCCAGACAGTGAGACCCCCGCCGTGCTaGCACCTCCGTGGCCCTCTGTCAAAGGCTTTGCGC | + |
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Preference number: 6 (lower is better) Translates to: FTTTQTVRPPPC*HLRGPLSKALR Trigger: GCGCAAAGCCTTTGACAGAGGGCCACGGAGGTGGCAGCACGGCGGGGGTCTCACTGTCTGGGTGGTGGTGAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS CCA 72 bp | GAGAACTTCAGAAGTAGAGGACCAGATGAATGGGAGTaGCCCTGCCGCCACGGGGCTGAGCTCCACCGCTTT | + |
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Preference number: 6 (lower is better) Translates to: ENFRSRGPDEWE*PCRHGAELHRF Trigger: AAAGCGGTGGAGCTCAGCCCCGTGGCGGCAGGGCCACTCCCATTCATCTGGTCCTCTACTTCTGAAGTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS CCA 72 bp | GCATTCGAGAACTTCAGAAGTAGAGGACCAGATGAATaGGAGTGGCCCTGCCGCCACGGGGCTGAGCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: AFENFRSRGPDE*EWPCRHGAELH Trigger: GTGGAGCTCAGCCCCGTGGCGGCAGGGCCACTCCCATTCATCTGGTCCTCTACTTCTGAAGTTCTCGAATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS CAA 90 bp | ACCCACCATGGGAGACAAAGCACAGGGTCCAAGCAGACCAGGAAGTaGAAGAGGGTCACGGCAGCCAGTCTCTTGGCTCTTCAGCACCTC | + |
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Preference number: 6 (lower is better) Translates to: THHGRQSTGSKQTRK*KRVTAASLLALQHL Trigger: GAGGTGCTGAAGAGCCAAGAGACTGGCTGCCGTGACCCTCTTCAACTTCCTGGTCTGCTTGGACCCTGTGCTTTGTCTCCCATGGTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS GCA 72 bp | TGCCGGTCCTTTGAGTCCACATGCAGGCTCCTGCCTTaGTCCCCAGACTTGCCTGTGCTGGGTTGTTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: CRSFESTCRLLP*SPDLPVLGCSD Trigger: ATCTGAACAACCCAGCACAGGCAAGTCTGGGGAGCAAGGCAGGAGCCTGCATGTGGACTCAAAGGACCGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000441942.6 ENST00000536898.5 ENST00000601669.6 ENST00000602468.5 ENST00000602653.5 ENST00000602796.5 |
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| CDS GCA 72 bp | TTTGTCCACCTGTGCCAGCCACTGCTTTGTTTCGGGTaGCGGTCCTTTGAGTCCACATGCAGGCTCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: FVHLCQPLLCFG*RSFESTCRLLP Trigger: AGGCAGGAGCCTGCATGTGGACTCAAAGGACCGGCACCCGAAACAAAGCAGTGGCTGGCACAGGTGGACAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000441942.6 ENST00000536898.5 ENST00000601669.6 ENST00000602468.5 ENST00000602653.5 ENST00000602796.5 |
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| CDS CCA 72 bp | TTGAACTCCCTTTCCTCTGGGCAGGTCGTGCATGCCTaGGTCACTCCCCACCACTCATTACCTAGGGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LNSLSSGQVVHA*VTPHHSLPRVR Trigger: CCTGACCCTAGGTAATGAGTGGTGGGGAGTGACCCAGGCATGCACGACCTGCCCAGAGGAAAGGGAGTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS CAA 90 bp | TCACGTGGACTCTGCTCCGAAGGACAGTTGCTTTTCTTGCCTGGTTaGTCCACCTGTGCCAGCCACTGCTTTGTTTCGGGTGCCGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: SRGLCSEGQLLFLPG*STCASHCFVSGAGP Trigger: AGGACCGGCACCCGAAACAAAGCAGTGGCTGGCACAGGTGGACAAACCAGGCAAGAAAAGCAACTGTCCTTCGGAGCAGAGTCCACGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000441942.6 ENST00000536898.5 ENST00000601669.6 ENST00000602468.5 ENST00000602653.5 ENST00000602796.5 |
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| CDS TCA 72 bp | GGAGACAAAGCACAGGGTCCAAGCAGACCAGGAAGTTaGAGAGGGTCACGGCAGCCAGTCTCTTGGCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GDKAQGPSRPGS*RGSRQPVSWLF Trigger: GAAGAGCCAAGAGACTGGCTGCCGTGACCCTCTTCAACTTCCTGGTCTGCTTGGACCCTGTGCTTTGTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS TCA 72 bp | GAGAGCACTGAACAACACTGCGCCTGCCCACCAATTTaGCTCTTCCACTGGGGGAACCCACCATGGGAGACA | + |
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Preference number: 6 (lower is better) Translates to: ESTEQHCACPPI*LFHWGNPPWET Trigger: TGTCTCCCATGGTGGGTTCCCCCAGTGGAAGAGTCAAATTGGTGGGCAGGCGCAGTGTTGTTCAGTGCTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS CCA 72 bp | GTGGAGAGGTGGGGCACTCCTTTACCCCTGGAGTCCTaGGGAAAGTGTCTGTCCTGGATACATCTGGCACTT | + |
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Preference number: 6 (lower is better) Translates to: VERWGTPLPLES*GKCLSWIHLAL Trigger: AAGTGCCAGATGTATCCAGGACAGACACTTTCCCCAGGACTCCAGGGGTAAAGGAGTGCCCCACCTCTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS GCA 72 bp | TCTTCCCATCACGTGGACTCTGCTCCGAAGGACAGTTaGTTTTCTTGCCTGGTTTGTCCACCTGTGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SSHHVDSAPKDS*FSCLVCPPVPA Trigger: GGCTGGCACAGGTGGACAAACCAGGCAAGAAAAGCAACTGTCCTTCGGAGCAGAGTCCACGTGATGGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000441942.6 ENST00000536898.5 ENST00000601669.6 ENST00000602468.5 ENST00000602653.5 ENST00000602796.5 |
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| CDS TCA 72 bp | CTCAGCACTTGGGGAGGCCCAGGAGGGAAGATCGCTTaGAGGCAGAAGTTGTTGAACATCCTGGCCAACATA | + |
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Preference number: 6 (lower is better) Translates to: LSTWGGPGGKIA*RQKLLNILANI Trigger: TATGTTGGCCAGGATGTTCAACAACTTCTGCCTTCAAGCGATCTTCCCTCCTGGGCCTCCCCAAGTGCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000441942.6 ENST00000536898.5 ENST00000600405.1 ENST00000601669.6 ENST00000602468.5 ENST00000602653.5 ENST00000602796.5 |
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| CDS GCA 72 bp | CTTTTCTTGCCTGGTTTGTCCACCTGTGCCAGCCACTaGTTTGTTTCGGGTGCCGGTCCTTTGAGTCCACAT | + |
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Preference number: 6 (lower is better) Translates to: LFLPGLSTCASH*FVSGAGPLSPH Trigger: ATGTGGACTCAAAGGACCGGCACCCGAAACAAAGCAGTGGCTGGCACAGGTGGACAAACCAGGCAAGAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000441942.6 ENST00000536898.5 ENST00000601669.6 ENST00000602468.5 ENST00000602653.5 ENST00000602796.5 |
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| CDS GCA 72 bp | TCTCTATGCTGGCTTTGCTCTCAGGCAAATTCCTCCTaGGTGGTGGCGGGAAGCTCCAGGATTACCTTCTAC | + |
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Preference number: 6 (lower is better) Translates to: SLCWLCSQANSS*VVAGSSRITFY Trigger: GTAGAAGGTAATCCTGGAGCTTCCCGCCACCACGCAGGAGGAATTTGCCTGAGAGCAAAGCCAGCATAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000600405.1 ENST00000601669.6 |
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| CDS CCA 72 bp | TATGCTGGCTTTGCTCTCAGGCAAATTCCTCCTGCGTaGTGGCGGGAAGCTCCAGGATTACCTTCTACCTTC | + |
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Preference number: 6 (lower is better) Translates to: YAGFALRQIPPA*WREAPGLPSTF Trigger: GAAGGTAGAAGGTAATCCTGGAGCTTCCCGCCACCACGCAGGAGGAATTTGCCTGAGAGCAAAGCCAGCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000600405.1 ENST00000601669.6 |
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| CDS CAA 72 bp | CTCTGCTCCGAAGGACAGTTGCTTTTCTTGCCTGGTTaGTCCACCTGTGCCAGCCACTGCTTTGTTTCGGGT | + |
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Preference number: 6 (lower is better) Translates to: LCSEGQLLFLPG*STCASHCFVSG Trigger: ACCCGAAACAAAGCAGTGGCTGGCACAGGTGGACAAACCAGGCAAGAAAAGCAACTGTCCTTCGGAGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000441942.6 ENST00000536898.5 ENST00000601669.6 ENST00000602468.5 ENST00000602653.5 ENST00000602796.5 |
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| CDS CAA 72 bp | TCACGTGGACTCTGCTCCGAAGGACAGTTGCTTTTCTaGCCTGGTTTGTCCACCTGTGCCAGCCACTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: SRGLCSEGQLLF*PGLSTCASHCF Trigger: AAAGCAGTGGCTGGCACAGGTGGACAAACCAGGCAAGAAAAGCAACTGTCCTTCGGAGCAGAGTCCACGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000441942.6 ENST00000536898.5 ENST00000601669.6 ENST00000602468.5 ENST00000602653.5 ENST00000602796.5 |
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| CDS CAA 72 bp | TTCTTCCCATCACGTGGACTCTGCTCCGAAGGACAGTaGCTTTTCTTGCCTGGTTTGTCCACCTGTGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: FFPSRGLCSEGQ*LFLPGLSTCAS Trigger: GCTGGCACAGGTGGACAAACCAGGCAAGAAAAGCAACTGTCCTTCGGAGCAGAGTCCACGTGATGGGAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000441942.6 ENST00000536898.5 ENST00000601669.6 ENST00000602468.5 ENST00000602653.5 ENST00000602796.5 |
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| CDS CCA 72 bp | GCGAGGTCAGGTCCCTTGCCTTTTCCTGCAGGTAGATaGGTGGGTTTTCAAAGATGTCTGGTTTCAGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: ARSGPLPFPAGR*VGFQRCLVSEA Trigger: GGCTTCTGAAACCAGACATCTTTGAAAACCCACCCATCTACCTGCAGGAAAAGGCAAGGGACCTGACCTCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS CAA 90 bp | ATGACCTGTTTCTTCCCATCACGTGGACTCTGCTCCGAAGGACAGTaGCTTTTCTTGCCTGGTTTGTCCACCTGTGCCAGCCACTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: MTCFFPSRGLCSEGQ*LFLPGLSTCASHCF Trigger: AAAGCAGTGGCTGGCACAGGTGGACAAACCAGGCAAGAAAAGCAACTGTCCTTCGGAGCAGAGTCCACGTGATGGGAAGAAACAGGTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441942.6 ENST00000602468.5 |
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| CDS CAA 90 bp | TGTGTCTGTTTCTTCCCATCACGTGGACTCTGCTCCGAAGGACAGTaGCTTTTCTTGCCTGGTTTGTCCACCTGTGCCAGCCACTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: CVCFFPSRGLCSEGQ*LFLPGLSTCASHCF Trigger: AAAGCAGTGGCTGGCACAGGTGGACAAACCAGGCAAGAAAAGCAACTGTCCTTCGGAGCAGAGTCCACGTGATGGGAAGAAACAGACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000536898.5 ENST00000601669.6 ENST00000602653.5 ENST00000602796.5 |
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| CDS CCA 72 bp | AATCAAAGCTGTAGTTGTGGCTGGTGGAACAGAGGCTaGAGGTCAGTTATTCAGCATCTGCAGGAGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: NQSCSCGWWNRG*RSVIQHLQELP Trigger: TGGAAGCTCCTGCAGATGCTGAATAACTGACCTCCAGCCTCTGTTCCACCAGCCACAACTACAGCTTTGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000441942.6 ENST00000601669.6 ENST00000602468.5 |
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| CDS CCA 72 bp | AACAGAGTGAGACTGTGTCTGTTTCTTCCCATCACGTaGACTCTGCTCCGAAGGACAGTTGCTTTTCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: NRVRLCLFLPIT*TLLRRTVAFLA Trigger: GGCAAGAAAAGCAACTGTCCTTCGGAGCAGAGTCCACGTGATGGGAAGAAACAGACACAGTCTCACTCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000536898.5 ENST00000601669.6 ENST00000602653.5 ENST00000602796.5 |
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| CDS CCA 72 bp | TGGGCGACAGAACAAGACCCTTTTCCTGCAGGTAGATaGGTGGGTTTTCAAAGATGTCTGGTTTCAGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: WATEQDPFPAGR*VGFQRCLVSEA Trigger: GGCTTCTGAAACCAGACATCTTTGAAAACCCACCCATCTACCTGCAGGAAAAGGGTCTTGTTCTGTCGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602653.5 |
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| CDS CAA 90 bp | GCTGGTGAGCCTTCTTGCAGAAAGAGCTGGATTTACGCCATCACGTaGAAGAGGACCTTGGCAGCTTTTACTGTAATCCAAGCTACTTGG | + |
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Preference number: 6 (lower is better) Translates to: AGEPSCRKSWIYAIT*KRTLAAFTVIQATW Trigger: CCAAGTAGCTTGGATTACAGTAAAAGCTGCCAAGGTCCTCTTCAACGTGATGGCGTAAATCCAGCTCTTTCTGCAAGAAGGCTCACCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS TCA 72 bp | AAGAAAATCAAGGGGTCAATGCAGCATCGAGAGCACTaGACAACACTGCGCCTGCCCACCAATTTGACTCTT | + |
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Preference number: 6 (lower is better) Translates to: KKIKGSMQHREH*TTLRLPTNLTL Trigger: AAGAGTCAAATTGGTGGGCAGGCGCAGTGTTGTTCAGTGCTCTCGATGCTGCATTGACCCCTTGATTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS GCA 72 bp | AGTATCATGACCTGTTTCTTCCCATCACGTGGACTCTaGTCCGAAGGACAGTTGCTTTTCTTGCCTGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: SIMTCFFPSRGL*SEGQLLFLPGL Trigger: CAAACCAGGCAAGAAAAGCAACTGTCCTTCGGAGCAGAGTCCACGTGATGGGAAGAAACAGGTCATGATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441942.6 ENST00000602468.5 |
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| CDS CCA 72 bp | AGTCTCTTCTCCAATCAAAGCTGTAGTTGTGGCTGGTaGAACAGAGGCTGGAGGTCAGTTATTCAGCATCTG | + |
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Preference number: 6 (lower is better) Translates to: SLFSNQSCSCGW*NRGWRSVIQHL Trigger: CAGATGCTGAATAACTGACCTCCAGCCTCTGTTCCACCAGCCACAACTACAGCTTTGATTGGAGAAGAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000441942.6 ENST00000601669.6 ENST00000602468.5 |
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| CDS CCA 72 bp | TTCCTGCAGGTAGATGGGTGGGTTTTCAAAGATGTCTaGTTTCAGAAGCCGGTGGCATCTTGTCTAACTGGA | + |
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Preference number: 6 (lower is better) Translates to: FLQVDGWVFKDV*FQKPVASCLTG Trigger: TCCAGTTAGACAAGATGCCACCGGCTTCTGAAACCAGACATCTTTGAAAACCCACCCATCTACCTGCAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000441942.6 ENST00000536898.5 ENST00000601669.6 ENST00000602468.5 ENST00000602653.5 ENST00000602796.5 |
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| CDS CCA 72 bp | GCTCCAGGATTACCTTCTACCTTCCTAACCACCCTGTaGAAAGAGAAAGCTGTAATCCAAGCTACTTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: APGLPSTFLTTL*KEKAVIQATWE Trigger: CTCCCAAGTAGCTTGGATTACAGCTTTCTCTTTCCACAGGGTGGTTAGGAAGGTAGAAGGTAATCCTGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601669.6 |
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| CDS GCA 72 bp | TTATACCTGTTACAAAGAACGAGGCAGGTCCACGTATaGCAATGTAGATCAGGCCCTGACATGTACAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: LYLLQRTRQVHV*QCRSGPDMYRR Trigger: TCTCCTGTACATGTCAGGGCCTGATCTACATTGGCATACGTGGACCTGCCTCGTTCTTTGTAACAGGTATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441942.6 |
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| CDS CCA 72 bp | ATCAGTCTCTTCTCCAATCAAAGCTGTAGTTGTGGCTaGTGGAACAGAGGCTGGAGGTCAGTTATTCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: ISLFSNQSCSCG*WNRGWRSVIQH Trigger: ATGCTGAATAACTGACCTCCAGCCTCTGTTCCACCAGCCACAACTACAGCTTTGATTGGAGAAGAGACTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000441942.6 ENST00000601669.6 ENST00000602468.5 |
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| CDS CCA 72 bp | ACTCAAAAGTATCATGACCTGTTTCTTCCCATCACGTaGACTCTGCTCCGAAGGACAGTTGCTTTTCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: TQKYHDLFLPIT*TLLRRTVAFLA Trigger: GGCAAGAAAAGCAACTGTCCTTCGGAGCAGAGTCCACGTGATGGGAAGAAACAGGTCATGATACTTTTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000441942.6 ENST00000602468.5 |
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| CDS CAA 72 bp | AAGAGCTGGATTTACGCCATCACGTTGAAGAGGACCTaGGCAGCTTTTACTGTAATCCAAGCTACTTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: KSWIYAITLKRT*AAFTVIQATWE Trigger: CTCCCAAGTAGCTTGGATTACAGTAAAAGCTGCCAAGGTCCTCTTCAACGTGATGGCGTAAATCCAGCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS CAA 90 bp | AAATGCCTGAATGTGTGGTTTTTCTCTGTTTCACCTTCCTTTAAGTaGACTTCAGGCTTAGGCAGCCTCTCTTCACAATGGCCCCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: KCLNVWFFSVSPSFK*TSGLGSLSSQWPPE Trigger: TTCTGGGGGCCATTGTGAAGAGAGGCTGCCTAAGCCTGAAGTCAACTTAAAGGAAGGTGAAACAGAGAAAAACCACACATTCAGGCATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000602796.5 |
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| CDS TCA 72 bp | ACAAACACAGTAGGATGTAACCACTCAAAAGTATCATaGCCTGTTTCTTCCCATCACGTGGACTCTGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: TNTVGCNHSKVS*PVSSHHVDSAP Trigger: CGGAGCAGAGTCCACGTGATGGGAAGAAACAGGTCATGATACTTTTGAGTGGTTACATCCTACTGTGTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602468.5 |
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| CDS CAA 72 bp | TTTCAAAGATGTCTGGTTTCAGAAGCCGGTGGCATCTaGTCTAACTGGACCACCTTTTCCTTTTCCACCAAC | + |
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Preference number: 6 (lower is better) Translates to: FQRCLVSEAGGI*SNWTTFSFSTN Trigger: GTTGGTGGAAAAGGAAAAGGTGGTCCAGTTAGACAAGATGCCACCGGCTTCTGAAACCAGACATCTTTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000441942.6 ENST00000536898.5 ENST00000601669.6 ENST00000602468.5 ENST00000602653.5 ENST00000602796.5 |
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| CDS CCA 72 bp | CAATGTAGATCAGGCCCTGACATGTACAGGAGAAAGTaGCTGAAATCAGTCTCTTCTCCAATCAAAGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: QCRSGPDMYRRK*LKSVSSPIKAV Trigger: TACAGCTTTGATTGGAGAAGAGACTGATTTCAGCCACTTTCTCCTGTACATGTCAGGGCCTGATCTACATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441942.6 |
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| CDS CAA 72 bp | CAAAATGAAAACACTCACTCAATGGCTGAGTTGGGTTaGAGCTATCTACTACTCTCCTTGACCTCTGAAACT | + |
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Preference number: 6 (lower is better) Translates to: QNENTHSMAELG*SYLLLSLTSET Trigger: AGTTTCAGAGGTCAAGGAGAGTAGTAGATAGCTCAAACCCAACTCAGCCATTGAGTGAGTGTTTTCATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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| CDS CAA 72 bp | AAGGAACAAAATGAAAACACTCACTCAATGGCTGAGTaGGGTTTGAGCTATCTACTACTCTCCTTGACCTCT | + |
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Preference number: 6 (lower is better) Translates to: KEQNENTHSMAE*GLSYLLLSLTS Trigger: AGAGGTCAAGGAGAGTAGTAGATAGCTCAAACCCAACTCAGCCATTGAGTGAGTGTTTTCATTTTGTTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536898.5 |
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