Pregenerated sensors for LINC01527 (Homo sapiens)

Ensembl gene IDs: ENSG00000224308

Ensembl transcript IDs: ENST00000419578.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GGCAGCTGGCGGCTTCCTCGAGCTCTACTCTTCTTAATTAGCAGCTaGAGTTTCCATCTCAGACAAGGATCTGGTTCTAAACTATCTAAT	+
Preference number: 5 (lower is better) Translates to: GSWRLPRALLFLISS*SFHLRQGSGSKLSN Trigger: ATTAGATAGTTTAGAACCAGATCCTTGTCTGAGATGGAAACTGCAGCTGCTAATTAAGAAGAGTAGAGCTCGAGGAAGCCGCCAGCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419578.1
CDS GCA 90 bp	CTGGTTCTAAACTATCTAATCATCTTTCCTGACATGCATCTACATTaGCCTGCTGGAAACATGAGCGGCATGCACAGGCATCTTCTCCTA	+
Preference number: 5 (lower is better) Translates to: LVLNYLIIFPDMHLH*PAGNMSGMHRHLLL Trigger: TAGGAGAAGATGCCTGTGCATGCCGCTCATGTTTCCAGCAGGGCAATGTAGATGCATGTCAGGAAAGATGATTAGATAGTTTAGAACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419578.1
CDS TCA 90 bp	CATCTCAGACAAGGATCTGGTTCTAAACTATCTAATCATCTTTCCTaGCATGCATCTACATTGCCCTGCTGGAAACATGAGCGGCATGCA	+
Preference number: 5 (lower is better) Translates to: HLRQGSGSKLSNHLS*HASTLPCWKHERHA Trigger: TGCATGCCGCTCATGTTTCCAGCAGGGCAATGTAGATGCATGTCAGGAAAGATGATTAGATAGTTTAGAACCAGATCCTTGTCTGAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419578.1
CDS TCA 72 bp	TTCCTGACATGCATCTACATTGCCCTGCTGGAAACATaGGCGGCATGCACAGGCATCTTCTCCTACCACGCT	+
Preference number: 6 (lower is better) Translates to: FLTCIYIALLET*AACTGIFSYHA Trigger: AGCGTGGTAGGAGAAGATGCCTGTGCATGCCGCTCATGTTTCCAGCAGGGCAATGTAGATGCATGTCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419578.1
CDS GCA 72 bp	AACTATCTAATCATCTTTCCTGACATGCATCTACATTaGCCTGCTGGAAACATGAGCGGCATGCACAGGCAT	+
Preference number: 6 (lower is better) Translates to: NYLIIFPDMHLH*PAGNMSGMHRH Trigger: ATGCCTGTGCATGCCGCTCATGTTTCCAGCAGGGCAATGTAGATGCATGTCAGGAAAGATGATTAGATAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419578.1
CDS GCA 72 bp	CGGCTTCCTCGAGCTCTACTCTTCTTAATTAGCAGCTaGAGTTTCCATCTCAGACAAGGATCTGGTTCTAAA	+
Preference number: 6 (lower is better) Translates to: RLPRALLFLISS*SFHLRQGSGSK Trigger: TTTAGAACCAGATCCTTGTCTGAGATGGAAACTGCAGCTGCTAATTAAGAAGAGTAGAGCTCGAGGAAGCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419578.1
CDS TCA 72 bp	CAAGGATCTGGTTCTAAACTATCTAATCATCTTTCCTaGCATGCATCTACATTGCCCTGCTGGAAACATGAG	+
Preference number: 6 (lower is better) Translates to: QGSGSKLSNHLS*HASTLPCWKHE Trigger: CTCATGTTTCCAGCAGGGCAATGTAGATGCATGTCAGGAAAGATGATTAGATAGTTTAGAACCAGATCCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419578.1

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