Pregenerated sensors for LINC01526 (Homo sapiens)

Ensembl gene IDs: ENSG00000224995

Ensembl transcript IDs: ENST00000441949.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CAGCCCAGGGAGAACCAGGACCAAGGACAAGAGACCCCTGGGCACTaGGGGTGTTCCATAAAGTGGCAGGAGTTGAGAGGTGAAGCTGGA	+
Preference number: 5 (lower is better) Translates to: QPRENQDQGQETPGH*GCSIKWQELRGEAG Trigger: TCCAGCTTCACCTCTCAACTCCTGCCACTTTATGGAACACCCTCAGTGCCCAGGGGTCTCTTGTCCTTGGTCCTGGTTCTCCCTGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441949.1
CDS TCA 90 bp	GCTGTCTTCTCCTCTGGAGTGCTTGCAATGGTGTGTTGGTCAAGTTaGACTTTAAAGGAACCTTTAGGAGCAAACAAAGGGCAGGACCTT	+
Preference number: 5 (lower is better) Translates to: AVFSSGVLAMVCWSS*TLKEPLGANKGQDL Trigger: AAGGTCCTGCCCTTTGTTTGCTCCTAAAGGTTCCTTTAAAGTTCAACTTGACCAACACACCATTGCAAGCACTCCAGAGGAGAAGACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441949.1
CDS CCA 90 bp	TTACAAACTAAAGTGGATTTGACACAGCAAGGCTGTCTTCTCCTCTaGAGTGCTTGCAATGGTGTGTTGGTCAAGTTGAACTTTAAAGGA	+
Preference number: 5 (lower is better) Translates to: LQTKVDLTQQGCLLL*SACNGVLVKLNFKG Trigger: TCCTTTAAAGTTCAACTTGACCAACACACCATTGCAAGCACTCCAGAGGAGAAGACAGCCTTGCTGTGTCAAATCCACTTTAGTTTGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441949.1
CDS TCA 72 bp	GAGAACCAGGACCAAGGACAAGAGACCCCTGGGCACTaGGGGTGTTCCATAAAGTGGCAGGAGTTGAGAGGT	+
Preference number: 6 (lower is better) Translates to: ENQDQGQETPGH*GCSIKWQELRG Trigger: ACCTCTCAACTCCTGCCACTTTATGGAACACCCTCAGTGCCCAGGGGTCTCTTGTCCTTGGTCCTGGTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441949.1
CDS CAA 90 bp	GGCTGTCTTCTCCTCTGGAGTGCTTGCAATGGTGTGTTGGTCAAGTaGAACTTTAAAGGAACCTTTAGGAGCAAACAAAGGGCAGGACCT	+
Preference number: 6 (lower is better) Translates to: GCLLLWSACNGVLVK*NFKGTFRSKQRAGP Trigger: AGGTCCTGCCCTTTGTTTGCTCCTAAAGGTTCCTTTAAAGTTCAACTTGACCAACACACCATTGCAAGCACTCCAGAGGAGAAGACAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441949.1
CDS CCA 72 bp	AAAGTGGATTTGACACAGCAAGGCTGTCTTCTCCTCTaGAGTGCTTGCAATGGTGTGTTGGTCAAGTTGAAC	+
Preference number: 6 (lower is better) Translates to: KVDLTQQGCLLL*SACNGVLVKLN Trigger: GTTCAACTTGACCAACACACCATTGCAAGCACTCCAGAGGAGAAGACAGCCTTGCTGTGTCAAATCCACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441949.1
CDS CAA 72 bp	GGCTGTCTTCTCCTCTGGAGTGCTTGCAATGGTGTGTaGGTCAAGTTGAACTTTAAAGGAACCTTTAGGAGC	+
Preference number: 6 (lower is better) Translates to: GCLLLWSACNGV*VKLNFKGTFRS Trigger: GCTCCTAAAGGTTCCTTTAAAGTTCAACTTGACCAACACACCATTGCAAGCACTCCAGAGGAGAAGACAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441949.1
CDS CAA 72 bp	AAATACATGAGTAAGGGTCTCATATACATCCTCTTATaGGCACACTGCAAAGTCTCAAGGCAGCCCAGGGAG	+
Preference number: 6 (lower is better) Translates to: KYMSKGLIYILL*AHCKVSRQPRE Trigger: CTCCCTGGGCTGCCTTGAGACTTTGCAGTGTGCCAATAAGAGGATGTATATGAGACCCTTACTCATGTATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441949.1

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