Pregenerated sensors for LINC01522 (Homo sapiens)
Ensembl gene IDs: ENSG00000237423Ensembl transcript IDs: ENST00000428999.1, ENST00000655778.1, ENST00000669282.1, ENST00000671461.1, ENST00000673791.1
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCATTGGCCAATGGGACGTCAGCAGGTGTGACGTGGGCAAAGAGGTaGCATGTGCTAGCACAGCTGGTCTTGCCTGCTTGTTCTCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ALANGTSAGVTWAKR*HVLAQLVLPACSPA Trigger: GGCAGGAGAACAAGCAGGCAAGACCAGCTGTGCTAGCACATGCCACCTCTTTGCCCACGTCACACCTGCTGACGTCCCATTGGCCAATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000428999.1 ENST00000655778.1 ENST00000669282.1 ENST00000671461.1 ENST00000673791.1 |
||
| CDS GCA 90 bp | CAGTGCTCTCTCTATGGCCCAAGGTTGCTCAGTACCTGCCAGGCCTaGGCAGAGCACTTTAGAATCATTAGCCCAATTAACCCTGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: QCSLYGPRLLSTCQA*AEHFRIISPINPDC Trigger: GCAGTCAGGGTTAATTGGGCTAATGATTCTAAAGTGCTCTGCGCAGGCCTGGCAGGTACTGAGCAACCTTGGGCCATAGAGAGAGCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655778.1 ENST00000671461.1 |
||
| CDS CCA 90 bp | GTTTGTGGGATCTGGGAGAAGAAGGGTTTTTATGAGGAAGATCCTTaGGGAGACAGAAACCTTGATGCGGGGAGCTGTGAGCGCTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: VCGIWEKKGFYEEDP*GDRNLDAGSCERST Trigger: AGTGGAGCGCTCACAGCTCCCCGCATCAAGGTTTCTGTCTCCCCAAGGATCTTCCTCATAAAAACCCTTCTTCTCCCAGATCCCACAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655778.1 ENST00000671461.1 |
||
| CDS TCA 90 bp | ACTTTAGAATCATTAGCCCAATTAACCCTGACTGCCACAAACACATaGGGTTGGGATTGTACCCATTCTACAGATGAGAAACTGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLESLAQLTLTATNT*GWDCTHSTDEKLRL Trigger: GAGCCTCAGTTTCTCATCTGTAGAATGGGTACAATCCCAACCTCATGTGTTTGTGGCAGTCAGGGTTAATTGGGCTAATGATTCTAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655778.1 ENST00000671461.1 |
||
| CDS CCA 72 bp | CTTGCATTGGCCAATGGGACGTCAGCAGGTGTGACGTaGGCAAAGAGGTGGCATGTGCTAGCACAGCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LALANGTSAGVT*AKRWHVLAQLV Trigger: GACCAGCTGTGCTAGCACATGCCACCTCTTTGCCCACGTCACACCTGCTGACGTCCCATTGGCCAATGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000428999.1 ENST00000655778.1 ENST00000669282.1 ENST00000671461.1 ENST00000673791.1 |
||
| CDS CCA 72 bp | AATGGGACGTCAGCAGGTGTGACGTGGGCAAAGAGGTaGCATGTGCTAGCACAGCTGGTCTTGCCTGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: NGTSAGVTWAKR*HVLAQLVLPAC Trigger: ACAAGCAGGCAAGACCAGCTGTGCTAGCACATGCCACCTCTTTGCCCACGTCACACCTGCTGACGTCCCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000428999.1 ENST00000655778.1 ENST00000669282.1 ENST00000671461.1 ENST00000673791.1 |
||
| CDS GCA 72 bp | TCTGCGCAGGATGTGTCTGTGTGGGGACTTCTCCTGTaGATCATGGGAGGTTTAGCAGCATCCTTGGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SAQDVSVWGLLL*IMGGLAASLAS Trigger: TGAGGCCAAGGATGCTGCTAAACCTCCCATGATGCACAGGAGAAGTCCCCACACAGACACATCCTGCGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673791.1 |
||
| CDS CCA 72 bp | ATCTGGGAGAAGAAGGGTTTTTATGAGGAAGATCCTTaGGGAGACAGAAACCTTGATGCGGGGAGCTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: IWEKKGFYEEDP*GDRNLDAGSCE Trigger: CTCACAGCTCCCCGCATCAAGGTTTCTGTCTCCCCAAGGATCTTCCTCATAAAAACCCTTCTTCTCCCAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655778.1 ENST00000671461.1 |
||
| CDS GCA 72 bp | ATGCCAATAGCATCCCCCTCTCCTAGTTGTGACAATTaGAAACATATCCAGACATTGCCAAATGTCCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: MPIASPSPSCDN*KHIQTLPNVLW Trigger: CCAGAGGACATTTGGCAATGTCTGGATATGTTTGCAATTGTCACAACTAGGAGAGGGGGATGCTATTGGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000673791.1 |
||
| CDS GCA 72 bp | GAGCACTTTAGAATCATTAGCCCAATTAACCCTGACTaGCACAAACACATGAGGTTGGGATTGTACCCATTC | + |
|
Preference number: 6 (lower is better) Translates to: EHFRIISPINPD*HKHMRLGLYPF Trigger: GAATGGGTACAATCCCAACCTCATGTGTTTGTGGCAGTCAGGGTTAATTGGGCTAATGATTCTAAAGTGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655778.1 ENST00000671461.1 |
||
| CDS TCA 72 bp | TCATTAGCCCAATTAACCCTGACTGCCACAAACACATaGGGTTGGGATTGTACCCATTCTACAGATGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SLAQLTLTATNT*GWDCTHSTDEK Trigger: TTTCTCATCTGTAGAATGGGTACAATCCCAACCTCATGTGTTTGTGGCAGTCAGGGTTAATTGGGCTAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655778.1 ENST00000671461.1 |
||